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Oryza sativa
cluster # 13930 cluster # 13930       Sequences # 14       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13930#0 length = 739 sequences # 3  
consensus_13930#1 length = 723 sequences # 5  
consensus_13930#2 length = 705 sequences # 6  

consensusID : consensus_13930#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 739
fasta sequence
                              [ATACCAGCAGGCAGCAGTTGCAGTTCCTCACCAAAACGCCATCCCCATCCTCCCTGCCATCCTCCCTGCCGTGAGTGCCTTCTTGCGTCGAGTTTGAGCAAAGTTGAATACAGTATCTGCTGTGTTTTTTAGGACAAGTTGATACTGTGGAGGAGATGAAGAGGTTACTTGTTCGTGGGCTGTTTTCTTCTCCATCCAGGGGTTTGTTGGGCAAATCTCCTGTCAGGCCTGCACTTTGCAACGATGCTCTTCTCTCCAGGTTCCTCTCAACGGGGAAAGATGAGAACACAGTGACCGAAATCGGAGAGAAGGCAAGATCAACAGCGGAACAATTCCTCAAGGTGGCCAAGGAGAAGACTGACGAGGTAAGCGAGAAAACAAAGGAAACGATGCACGAAACAAAGGAAGCAGTGGTC-GGGGAGTCAGATGACGAG-AGGGAGAAGTTCAAGCAGAGGGTTGAGGA-GGGGGAGGTACCATCAGAATTAAGTGGCTAGTGCTCAATTATACTCCATCTTGTAGCTTCAGACTTCAGTGATGGCCTCTGTCAAAAGTCCTAGAACCTGCAGATTGTCCAGTACTACTAGGCTTGGCATGTACTAGGTAGTATATGTTGTTTGTTTCCTCCTGTTCAATGATCTGTTGTAGAATGAATAAGGTCAACTTTGAACTTCATAGTGAACTTTTGATGCCACTACTTGTCATTTTCGCAGAATAAATAAGATGAACCTTTGTGAAAAAA]

[+] EMBL CF319733             [ATACCAGCAGGCAGCAGTTGCAGTTCCTCACCAAAACGCCATCCCCATCCTCCCTGCCATCCTCCCTGCCGTGAGTGCCTTCTTGCGTCGAGTTTGAGCAAAGTTGAATACAGTATCTGCTGTGTTTTTTAGGACAAGTTGATACTGTGGAGGAGATGAAGAGGTTACTTGTTCGTGGGCTGTTTTCTTCTCCATCCAGGGGTTTGTTGGGCAAATCTCCTGTCAGGCCTGCACTTTGCAACGATGCTCTTCTCTCCAGGTTCCTCTCAACGGGGAAAGATGAGAACACAGTGACCGAAATCGGAGAGAAGGCAAGATCAACAGCGGAACAATTCCTCAAGGTGGCCAAGGAGAAGACTGACGAGGTAAGCGAGAAAACAAAGGAAACGATGCACGAAACAAAGGAAGCAGTGGTCGGGGGAGTCAGATGACGAG AGGGAGAAGTTCAAGCAGAGGGTTGAGGAGGGGGGAGGTACCATCAGAATTAAGTGGCTAGTGCTCAATTATACTCCATCTTGTAGCTTCAGACTTCAGTGATGGCCTCTGTCAAAAGTCCTAGAACCTGCAGATTGTC                                                                                                                                                                       ]
[+] EMBL CF319656             [                        TCCTCACCAAAACGCCATCCCCATCCTCCCTGCCATCCTCCCTGCCGTGAGTGCCTTCTTGCGTCGAGTTTGAGCAAAGTTGAATACAGTATCTGCTGTGTTTTTTAGGACAAGTTGATACTGTGGAGGAGATGAAGAGGTTACTTGTTCGTGGGCTGTTTTCTTCTCCATCCAGGGGTTTGTTGGGCAAATCTCCTGTCAGGCCTGCACTTTGCAACGATGCTCTTCTCTCCAGGTTCCTCTCAACGGGGAAAGATGAGAACACAGTGACCGAAATCGGAGAGAAGGCAAGATCAACAGCGGAACAATTCCTCAAGGTGGCCAAGGAGAAGACTGACGAGGTAAGCGAGAAAACAAAGGAAACGATGCACGAAACAAAGGAAGCAGTGGTC GGGGAGTCAGATGACGAGAAGGGAGAAGTTCAAGCAGAGGGTTGAGGA GGGGGAGGTACCATCAGAATTAAGTGGCTAGTGCTCAATTATACTCCATCTTGTAGCTTCAGACTTCAGTGATGGCCTCTGTCAAAAGTCCTAGAACCTGCAGATTGTCCAGTACTACTAGGCTT                                                                                                                                                       ]
[-] EMBL AU165131             [                                                                                                                                                                                                                                                                             ACGGGGAAAGATGAGAACACAGTGACCGAAATCGGAGAGAAGGCAAGATCAACAGCGGAACAATTCCTCAAGGTGGCCAAGGAGAAGACTGACGAGGTAAGCGAGAAAACAAAGGAAACGATGCACGAAACAAAGGAAGCAGTGGTC GGGGAGTCAGATGACGAG AAGGAGAAGTTCAAGCAGAGGGTTGAGGA  GGGGAGGTACCATCAGAATTAAGTGGCTAGTGCTCAATTATACTCCATCTTGTAGCTTCAGACTTCAGTGATGGCCTCTGTCAAAAGTCCTAGAACCTGCAGATTGTCCAGTACTACTAGGCTTGGCATGTACTAGGTAGTATATGTTGTTTGTTTCCTCCTGTTCAATGATCTGTTGTAGAATGAATAAGGTCAACTTTGAACTTCATAGTGAACTTTTGATGCCACTACTTGTCATTTTCGCAGAATAAATAAGATGAACCTTTGTGAAAAAA]


>consensus_13930#0 ATACCAGCAGGCAGCAGTTGCAGTTCCTCACCAAAACGCCATCCCCATCCTCCCTGCCAT CCTCCCTGCCGTGAGTGCCTTCTTGCGTCGAGTTTGAGCAAAGTTGAATACAGTATCTGC TGTGTTTTTTAGGACAAGTTGATACTGTGGAGGAGATGAAGAGGTTACTTGTTCGTGGGC TGTTTTCTTCTCCATCCAGGGGTTTGTTGGGCAAATCTCCTGTCAGGCCTGCACTTTGCA ACGATGCTCTTCTCTCCAGGTTCCTCTCAACGGGGAAAGATGAGAACACAGTGACCGAAA TCGGAGAGAAGGCAAGATCAACAGCGGAACAATTCCTCAAGGTGGCCAAGGAGAAGACTG ACGAGGTAAGCGAGAAAACAAAGGAAACGATGCACGAAACAAAGGAAGCAGTGGTCGGGG AGTCAGATGACGAGAGGGAGAAGTTCAAGCAGAGGGTTGAGGAGGGGGAGGTACCATCAG AATTAAGTGGCTAGTGCTCAATTATACTCCATCTTGTAGCTTCAGACTTCAGTGATGGCC TCTGTCAAAAGTCCTAGAACCTGCAGATTGTCCAGTACTACTAGGCTTGGCATGTACTAG GTAGTATATGTTGTTTGTTTCCTCCTGTTCAATGATCTGTTGTAGAATGAATAAGGTCAA CTTTGAACTTCATAGTGAACTTTTGATGCCACTACTTGTCATTTTCGCAGAATAAATAAG ATGAACCTTTGTGAAAAAA



consensusID : consensus_13930#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 723
fasta sequence
                              [ANCTGNTGCNGNGNANCGGTGCNGTGTACNGNTNGNGGCGCCAGTCCCCATCCTCCCTGCCATCCTCCCTGCCGTGAGTGCCTTCTTGCGTCGAGTTTGAGCAAAGTTGAATACAGTATCTGCTGTGTTTTTTAGGACAAGTTGATACTGTGGAGGAGATGAAGAGGTTACTTGTTCGTGGGCTGTTTTCTT-CTCCATCCAGGGGTTTGTTGGGCAAATCTCCTGTCAGGCCTGCACTTTGCAACGATGCTCTTCTCTCCAGGTTCCTCTCAACGGGGAAAGATGAGAACACAGTGACCGAAATCGGAGAGAAGGCAAGATCAACAGCGGAACAATTCCTCAAGGTGGCCAAGGAGAAGACTGA-CGAGGTAAGCGAGAAAACAAAGGAAACGATGCCCGAAACAAAGGAAGCAGTGGTCGGGGAGTCAGATGACGAGAAGGAGAAGTTCAAGCAAAGGGTTGAGGAGGGGAGGTACCATCAGAATTAAGTGGCTAGTGCTCAATTATACTCCATCTTGTAGCTTCAGACTTCAGTGATGGCCTCTGTCAAAAGTCCTAGAACCTGCAGATTGTCCAGTACTACTAGGCTTGGCATGTA-CTAGGTAGTATATGTTGTTTGTTTCCTCCTGTTCAATGATCTGTTGTAGAATGAATAAGGTCAACTTTGAACTTCATAGTGAACTTTTGATGCCCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL OSC1911              [ANCTGNTGCNGNGNANCGGTGCNGTGTACNGNTNGNGGCGCCAGTCCCCATCCTCCCTGCCATCCTCCCTGCCGTGAGTGCCTTCTTGCGTCGAGTTTGAGCAAAGTTGAATACAGTATCTGCTGTGTTTTTTAGGACAAGTTGATACTGTGGAGGAGATGAAGAGGTTACTTGTTCGTGGGCTGTTTTCTT CTCCATCCAGGGGTTTGTTGGGCAAATCTCCTGTCAGGCCTGCACTTTGCAACGATGCTCTTCTCTCCAGGTTCCTCTCAACGGGGAAAGATGAGAACACAGTGACCGAAATCGGAGAGAAGGCAAGATCAACAGCGGAACAATTCCTCAAGGTNGCCAAGGAGAAGAC                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CF279685             [                                                                                                        AGTTGAATACAGTATCTGCTGTGTTTTTTAGGACAAGTTGATACTGTGGAGGAGATGAAGAGGTTACTTGTTCGTGGGCTGTTTTCTT CTCCATCCAGGGGTTTGTTGGGCAAATCTCCTGTCAGGCCTGCACTTTGCAACGATGCTTTTCTCTCCAGGTTCCTCTCAACGGGGAAAGATGAGAACACAGTGCCCGAAATCGGAGAGAAGGCAAGATCAACAGCGGAACAATTCCTCAAGGTGGCCAAGGAGAAGACTGA CGAGGTAAGCGAGAAAACAAAGGAAACGATGCCCGAAACAAAGGAAGCAGTGGTCGGGGAGTCAGATGACGAGAAGGAGAAGTTCAAGCAAAGGGTTGAGGAGGGGAGGTACCATCAGAATTAAGTGGCTAGTGCTCAATTATACTCCATCTTGTAGCTTCAGACTTCAGTGATGGCCTCTGTCAAAAGTCCTAGAACCTGCAGATTGTCCAGTACTACTAGGCTTGGCATGTA CTAGGTAGTATATGTTGTTTGTTTCCTCCTGTTCAATGATCTGTTGTAGAATGAATAAGGTCAACTTTGAACTTCATAGTGAACTTTTGATGCCCCTAAAAAAAAAAAAAAAAAAAAAAAAA   ]
[+] EMBL BI799932             [                                                                                                                                                                GAAGA GTTAC TGTTCGTGGCCTGTTTTCTTCCTCCATCCA GGGTTT TTTGGCAAATCTCCTGTCAGCCCTGCACTTTGCAACGATGCTCTTCTCTCCAGGTTCCTCTCAACGGAGAAAGATGAGAACACAGTGACCGAAATCGGAGAGAAGGCAAGATCAACAGCGGAACAATTCCTCAAGGT GCCAAGGAGAAGACTGACCGAGGTAAGCGAGAAAACCAAGGAAACGATGCACGAAACAAAGGAACCAGTGGTCGGGGAGTCAGATGACGAGAAGGAGAAGTTCAACCAGA GGTTGAGGAGGGGAGGTACCATCAGAATTAAGTGGCTAGTGCTCAATTATACTCCATCTTGTAGCTTCAGACTTCAGTGATGCCCTCTGTCAAAAGTCCTAGAACCTCCAGATTGTCCAGTACTACTAGGCTTGGCATGTACCTAGGTAGTATAT TTGTTTGTTTCCTCCTGTTCAATGATCTGTTGTAGAATGAATAAGGTCAACTTTGAACTTCATAGTGAACTTTTGAT   CCAAAAAAAAAA                   ]
[+] EMBL AU163978             [                                                                                                                                                                     GGTTACTTGTTCGTGGGCTGTTTTCTT CTCCATCCAGGGGTTTGTTGGGCAAATCTCCTGTCAGGCCTGCACTTTGCAACGATGCTCTTCTCTNCAGGTTCCTCTCAACGGGGAAAGATGAGAACACAGTGACCGAAATCGGAGAGAAGGCAAGATCAACAGCGGAACAATTCCTCAAGGTGGCCAAGGAGAAGACTGA CGAGGTAAGCGAGAAAACAAAGGAAACGATGCACGAAACAAAGGAAGCAGTGGTCGGGGAGTCAGATGACGAGAAGGAGAAGTTCAAGCAGAGGGTTGAGGAGGGGAGGTACCATCAGAATTAAGTGGCTAGTGCTCAATTATACTCCATCTTGTAGCTTCAGACTTCAGTGATGGCCTCTGTCAAAAGTCCTAGAACCTGCAGATTGTCCAGTACTACTAGGCTTGGCATGTA CTAGGTAGTATATGTTGTTTGTTTCCTCCTGTTCAATGATCTGTTGTAGAATGAATAAGGTCAACTTTGAACTTCATAGTGAACTTTTGATGCCACTAAAAAAAAAAA                 ]
[-] EMBL CF319732             [                                                                                                                                                                                                                                                                                                                     GAGAAGGCAAGATCAACAGCGGAACAATTCCTCAAGGTGGCCAAGGAGAAGACTGA CGAGGTAAGCGAGAAAACAAAGGAAACGATGCCCGAAACAAAGGAAGCAGTGGTCGGGGAGTCAGATGACGAGAAGGAGAAGTTCAAGCAAAGGGTTGAGGAGGGGAGGTACCATCAGAATTAAGTGGCTAGTGCTCAATTATACTCCATCTTGTAGCTTCAGACTTCAGTGATGGCCTCTGTCAAAAGTCCTAGAACCTGCAGATTGTCCAGTACTACTAGGCTTGGCATGTA CTAGGTAGTATATGTTGTTTGTTTCCTCCTGTTCAATGATCTGTTGTAGAATGAATAAGGTCAACTTTGAACTTCATAGTGAACTTTTGATGCCCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_13930#1 ANCTGNTGCNGNGNANCGGTGCNGTGTACNGNTNGNGGCGCCAGTCCCCATCCTCCCTGC CATCCTCCCTGCCGTGAGTGCCTTCTTGCGTCGAGTTTGAGCAAAGTTGAATACAGTATC TGCTGTGTTTTTTAGGACAAGTTGATACTGTGGAGGAGATGAAGAGGTTACTTGTTCGTG GGCTGTTTTCTTCTCCATCCAGGGGTTTGTTGGGCAAATCTCCTGTCAGGCCTGCACTTT GCAACGATGCTCTTCTCTCCAGGTTCCTCTCAACGGGGAAAGATGAGAACACAGTGACCG AAATCGGAGAGAAGGCAAGATCAACAGCGGAACAATTCCTCAAGGTGGCCAAGGAGAAGA CTGACGAGGTAAGCGAGAAAACAAAGGAAACGATGCCCGAAACAAAGGAAGCAGTGGTCG GGGAGTCAGATGACGAGAAGGAGAAGTTCAAGCAAAGGGTTGAGGAGGGGAGGTACCATC AGAATTAAGTGGCTAGTGCTCAATTATACTCCATCTTGTAGCTTCAGACTTCAGTGATGG CCTCTGTCAAAAGTCCTAGAACCTGCAGATTGTCCAGTACTACTAGGCTTGGCATGTACT AGGTAGTATATGTTGTTTGTTTCCTCCTGTTCAATGATCTGTTGTAGAATGAATAAGGTC AACTTTGAACTTCATAGTGAACTTTTGATGCCCCTAAAAAAAAAAAAAAAAAAAAAAAAA AAA



consensusID : consensus_13930#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 705
fasta sequence
                              [TGGACTGAAGGAGTAGAAAGCAGTTTTTCACCAAAACGCCATCCCCATCCTCCCTGCCATCCTCCCTGCCGTGAGTGCCTTCTTGCGTCGAGTTTGAGCAAAGTTGAATACAGTATCTGCTGTGTTTTTTAGGACAAGTTGATACTGTGGAGGAGATGAAGAGGTTACTTGTTCGTGGGCTGTTTTCTTCTCCATCCAGGGGTTTGTTGGGCAAATCTCCTGTCAGGCCTGCACTTTGCAACGATGCTCTTCTCTCCAGGTTCCTCTCAACGGGGAAAGATGAGAACACAGTGACCGAAATCGGAGAGAAGGCAAGATCAACAGCGGAACAATTCCTCAAGGTGGCCAAGGAGAAGACTGACGAGGTAA--GCGAGAAAACAAAGGAAACGATGCACGAAACAAAGGAAGCAGTGGTCGGGGAGTCAGATGACGAGAAGGAGAAGTTCAAGCAGAGGGTTGAGGAGGGGAGGTACCATCAGAATTAAGTGGCTAGTGCTCAATTATACTCCATCTTGTAGCTTCAGACTTCAGTGATGGCCTCTGTCAAAAGTCCTAGAACCTGCAGATTGTCCAGTACTACTAGGCTTGGCATGTACTAGGTAGTATATGTTGTTTGTTTCCTCCTGTTCAATGATCTGTTGTAGAATGAATAAGGTCAACTTTGAACTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF278306             [TGGACTGAAGGAGTAGAAAGCAGTTTTTCACCAAAACGCCATCCCCATCCTCCCTGCCATCCTCCCTGCCGTGAGTGCCTTCTTGCGTCGAGTTTGAGCAAAGTTGAATACAGTATCTGCTGTGTTTTTTAGGACAAGTTGATACTGTGGAGGAGATGAAGAGGTTACTTGTTCGTGGGCTGTTTTCTTCTCCATCCAGGGGTTTGTTGGGCAAATCTCCTGTCAGGCCTGCACTTTGCAACGATGCTCTTCTCTCCAGGTTCCTCTCAACGGGGAAAGATGAGAACACAGTGACCGAAATCGGAGAGAAGGCAAGATCAACAGCGGAACAATTCCTCAAGGTGGCCAAGGAGAAGACTGACGAGGTAA  GCGAGAAAACAAAGGAAACGATGCACGAAACAAAGGAAGCAGTGGTCGGGGAGTCAGATGACGAG                                                                                                                                                                                                                                                                               ]
[+] EMBL CF279686             [                           TCACCAAAACGCCATCCCCATCCTCCCTGCCATCCTCCCTGCCGTGAGTGCCTTCTTGCGTCGAGTTTGAGCAAAGTTGAATACAGTATCTGCTGTGTTTTTTAGGACAAGTTGATACTGTGGAGGAGATGAAGAGGTTACTTGTTCGTGGGCTGTTTTCTTCTCCATCCAGGGGTTTGTTGGGCAAATCTCCTGTCAGGCCTGCACTTTGCAACGATGCTCTTCTCTCCAGGTTCCTCTCAACGGGGAAAGATGAGAACACAGTGACCGAAATCGGAGAGAAGGCAAGATCAACAGCGGAACAATTCCTCAAGGTGGCCAAGGAGAAGACTGACGAGGTAA  GCGAGAAAACAAAGGAAACGATGCACGAAACAAAGGAAGCAGTGGTCGGGGAGTCAGATGACGAGAAGGAGAAGTTCAAGC                                                                                                                                                                                                                                                               ]
[+] EMBL C73514               [                                           CCCATCCTCCCTGCCATCCTCCCTGCCGTGAGTGCCTTCTTGCGTCGAGTTTGAGCAAAGTTGAATACAGTATCTGCTGTGTTTTTTAGGACAAGTTGATACTGTGGAGGAGATGAAGAGGTTACTTGTTCGTGGGCTGTTTTCTTCTCCATCCAGGGGTTTGTTGGGCAAATCTCCTGTCAGGCCTGCACTTTGCAACGATGCTCTTCTCTCCAGGTTCCTCTCAACGGGGAAAGATGAGAACACAGTGACCGAAATCGGAGAGAAGGCAAGATCAACAGCGGAACAATTCCTCAAGGTGGCCAAGGAGAAGACTGACGAGGTAA  GCGAGAAAACAAAGGAAACGATGCACGAAACAAAGGAAGCAGTGGTCGNGGAGTCANATGACGAGANGGAGAAGTTCAAGCAGAGGGTTNAGGAGGGGAGGTACCATCAGATTT                                                                                                                                                                                                                              ]
[+] EMBL AU094334             [                                            CCATCCTCCCTGCCATCCTCCCTGCCGTGAGTGCCTTCTTGCGTCGAGTTTGAGCAAAGTTGAATNCAGTATCTGCTGTGTTTTTTAGGACAAGTTGATACTGTGGAGGAGATGAAGAGGTTACTTGTTCGTGGGCTGTTTTCTTCTCCATCCAGGGGTTTGTTGGGCAAATCTCCTGTCAGGCCTGCACTTTGCAACGATGCTCTTCTCTCCAGGTTCCTCTCAACGGGGAAAGATGAGAACNCAGTGACCGAAATCGGAGAGAAGGCAAGATCAACAGCGGAACAATTCCTCAAGGTGGCCAAGGAGAAGACTGACGAGGTAA  GCGAGAAAACAAAGGAAACGATGCACGAAACAAAGGAAGCAGTGGTCGGGGAGTCAGATGACGAGAAGGAGAAGTTCAAGCAGAGGGTTGAGGAGGGGAGGTACCATCAGAATTAAGTGGCTAGTGCTCAATTATACTCCATCTTGTAGCTTCAGACTTCAGTGATGGCCTCTGTCAAAAGTCCTAGAACCTGCAGATTGTCCAGTACTACTAGGCTTGGCATGTACTAGGTAGTATATGTTGTTTGTTTCCTCCTGTTCAATGATCTGTTGTAGAATGAATAAGGTCAACTTTGAACTTCAAAAAAAAAAAAAAAAAAAAAAA            ]
[-] EMBL CF319657             [                                                                 CTGCCGTGAGTGCCTTCTTGCGTCGAGTTTGAGCAAAGTTGAATACAGTATCTGCTGTGTTTTTTAGGACAAGTTGATACTGTGGAGGAGATGAAGAGGTTACTTGTTCGTGGGCTGTTTTCTTCTCCATCCAGGGGTTTGTTGGGCAAATCTCCTGTCAGGCCTGCACTTTGCAACGATGCTCTTCTCTCCAGGTTCCTCTCAACGGGGAAAGATGAGAACACAGTGACCGAAATCGGAGAGAAGGCAAGATCAACAGCGGAACAATTCCTCAAGGTGGCCAAGGAGAAGACTGACGAGGTTATTTTTATAAAACAAAGGAAACGATGCACGAAACAAAGGAAGCAGTGGTCGGGGAGTCAGGGGGCGAGAAGGAGAAGTTCCAGCAGAGGGTTGAGGAGGGGAGGTACCATCAGAAATTA  GAAAAGTG TCAATTATACTCCATCTTGTAGCTTCAGACTTCAGTGATGGCCTCTGTCAAAAGTCCTAGAACCTGCAGATTGTCCAGTACTACTAGGCTTGGCATGTACTAGGTAGTATATGTTGTTTGTTTCCTCCTGTTCAATGATCTGTTGTAGAATGAATAAGGTCGACTTTGAACTTCATAGTGAAAAAAAA                     ]
[-] EMBL CF321614             [                                                                                                                                                                                                                                                                                                           ATCGGAGAGAAGGCAAGATCAACAGCGGAACAATTCCTCAAGGTGGCCAAGGAGAAGACTGACGAGGTAA  GCGAGAAAACAAAGGAACCGATGCCCGAAACAAAGGAACCAGTGGTCGGGGAGTCAAATGACGAAAAGGAAAAGTTCAACCAAAGGGTTGAGGAGGGGAGGTCCCATCAGAATTAAGTGGCTAGTGCTCAATTATACTCCATTTTGTAGCTTCAGACTTCAGTGATGGCCTCTGTCAAAAGTCCTAGAACCTGCAGATTGTCCAGTACTATTAGGCTTGGCATGTACTAGGTAGTATATGTTGTTTGTTTCCTCCTGTTCAATGATCTGTTGTAGAATGAATAAGGTCAACTTTGAACTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_13930#2 TGGACTGAAGGAGTAGAAAGCAGTTTTTCACCAAAACGCCATCCCCATCCTCCCTGCCAT CCTCCCTGCCGTGAGTGCCTTCTTGCGTCGAGTTTGAGCAAAGTTGAATACAGTATCTGC TGTGTTTTTTAGGACAAGTTGATACTGTGGAGGAGATGAAGAGGTTACTTGTTCGTGGGC TGTTTTCTTCTCCATCCAGGGGTTTGTTGGGCAAATCTCCTGTCAGGCCTGCACTTTGCA ACGATGCTCTTCTCTCCAGGTTCCTCTCAACGGGGAAAGATGAGAACACAGTGACCGAAA TCGGAGAGAAGGCAAGATCAACAGCGGAACAATTCCTCAAGGTGGCCAAGGAGAAGACTG ACGAGGTAAGCGAGAAAACAAAGGAAACGATGCACGAAACAAAGGAAGCAGTGGTCGGGG AGTCAGATGACGAGAAGGAGAAGTTCAAGCAGAGGGTTGAGGAGGGGAGGTACCATCAGA ATTAAGTGGCTAGTGCTCAATTATACTCCATCTTGTAGCTTCAGACTTCAGTGATGGCCT CTGTCAAAAGTCCTAGAACCTGCAGATTGTCCAGTACTACTAGGCTTGGCATGTACTAGG TAGTATATGTTGTTTGTTTCCTCCTGTTCAATGATCTGTTGTAGAATGAATAAGGTCAAC TTTGAACTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13930#1      ANCTGNTGCNGNGNANCGGTGCNGTGTACNGNTNGNGGCGCCAGTCCCCATCCTCCCTGC 60
consensus_13930#2      -TGGACTGAAGGAGTAGAAAGCAGTTTTTCACCAAAA-CGCCA-TCCCCATCCTCCCTGC 57
consensus_13930#0      -ATACCAGCAGGCAGCAGTTGCAGTTCCTCACCAAAA-CGCCA-TCCCCATCCTCCCTGC 57
                              *  *         ** **             ***** ****************

consensus_13930#1      CATCCTCCCTGCCGTGAGTGCCTTCTTGCGTCGAGTTTGAGCAAAGTTGAATACAGTATC 120
consensus_13930#2      CATCCTCCCTGCCGTGAGTGCCTTCTTGCGTCGAGTTTGAGCAAAGTTGAATACAGTATC 117
consensus_13930#0      CATCCTCCCTGCCGTGAGTGCCTTCTTGCGTCGAGTTTGAGCAAAGTTGAATACAGTATC 117
                       ************************************************************

consensus_13930#1      TGCTGTGTTTTTTAGGACAAGTTGATACTGTGGAGGAGATGAAGAGGTTACTTGTTCGTG 180
consensus_13930#2      TGCTGTGTTTTTTAGGACAAGTTGATACTGTGGAGGAGATGAAGAGGTTACTTGTTCGTG 177
consensus_13930#0      TGCTGTGTTTTTTAGGACAAGTTGATACTGTGGAGGAGATGAAGAGGTTACTTGTTCGTG 177
                       ************************************************************

consensus_13930#1      GGCTGTTTTCTTCTCCATCCAGGGGTTTGTTGGGCAAATCTCCTGTCAGGCCTGCACTTT 240
consensus_13930#2      GGCTGTTTTCTTCTCCATCCAGGGGTTTGTTGGGCAAATCTCCTGTCAGGCCTGCACTTT 237
consensus_13930#0      GGCTGTTTTCTTCTCCATCCAGGGGTTTGTTGGGCAAATCTCCTGTCAGGCCTGCACTTT 237
                       ************************************************************

consensus_13930#1      GCAACGATGCTCTTCTCTCCAGGTTCCTCTCAACGGGGAAAGATGAGAACACAGTGACCG 300
consensus_13930#2      GCAACGATGCTCTTCTCTCCAGGTTCCTCTCAACGGGGAAAGATGAGAACACAGTGACCG 297
consensus_13930#0      GCAACGATGCTCTTCTCTCCAGGTTCCTCTCAACGGGGAAAGATGAGAACACAGTGACCG 297
                       ************************************************************

consensus_13930#1      AAATCGGAGAGAAGGCAAGATCAACAGCGGAACAATTCCTCAAGGTGGCCAAGGAGAAGA 360
consensus_13930#2      AAATCGGAGAGAAGGCAAGATCAACAGCGGAACAATTCCTCAAGGTGGCCAAGGAGAAGA 357
consensus_13930#0      AAATCGGAGAGAAGGCAAGATCAACAGCGGAACAATTCCTCAAGGTGGCCAAGGAGAAGA 357
                       ************************************************************

consensus_13930#1      CTGACGAGGTAAGCGAGAAAACAAAGGAAACGATGCCCGAAACAAAGGAAGCAGTGGTCG 420
consensus_13930#2      CTGACGAGGTAAGCGAGAAAACAAAGGAAACGATGCACGAAACAAAGGAAGCAGTGGTCG 417
consensus_13930#0      CTGACGAGGTAAGCGAGAAAACAAAGGAAACGATGCACGAAACAAAGGAAGCAGTGGTCG 417
                       ************************************ ***********************

consensus_13930#1      GGGAGTCAGATGACGAGAAGGAGAAGTTCAAGCAAAGGGTTGAGGAGGGG-AGGTACCAT 479
consensus_13930#2      GGGAGTCAGATGACGAGAAGGAGAAGTTCAAGCAGAGGGTTGAGGAGGGG-AGGTACCAT 476
consensus_13930#0      GGGAGTCAGATGACGAGAGGGAGAAGTTCAAGCAGAGGGTTGAGGAGGGGGAGGTACCAT 477
                       ****************** *************** *************** *********

consensus_13930#1      CAGAATTAAGTGGCTAGTGCTCAATTATACTCCATCTTGTAGCTTCAGACTTCAGTGATG 539
consensus_13930#2      CAGAATTAAGTGGCTAGTGCTCAATTATACTCCATCTTGTAGCTTCAGACTTCAGTGATG 536
consensus_13930#0      CAGAATTAAGTGGCTAGTGCTCAATTATACTCCATCTTGTAGCTTCAGACTTCAGTGATG 537
                       ************************************************************

consensus_13930#1      GCCTCTGTCAAAAGTCCTAGAACCTGCAGATTGTCCAGTACTACTAGGCTTGGCATGTAC 599
consensus_13930#2      GCCTCTGTCAAAAGTCCTAGAACCTGCAGATTGTCCAGTACTACTAGGCTTGGCATGTAC 596
consensus_13930#0      GCCTCTGTCAAAAGTCCTAGAACCTGCAGATTGTCCAGTACTACTAGGCTTGGCATGTAC 597
                       ************************************************************

consensus_13930#1      TAGGTAGTATATGTTGTTTGTTTCCTCCTGTTCAATGATCTGTTGTAGAATGAATAAGGT 659
consensus_13930#2      TAGGTAGTATATGTTGTTTGTTTCCTCCTGTTCAATGATCTGTTGTAGAATGAATAAGGT 656
consensus_13930#0      TAGGTAGTATATGTTGTTTGTTTCCTCCTGTTCAATGATCTGTTGTAGAATGAATAAGGT 657
                       ************************************************************

consensus_13930#1      CAACTTTGAACTTCATAGTGAACTTTTGATGCCCCTAAAAAAAAAAAAAAAAAAAAAAAA 719
consensus_13930#2      CAACTTTGAACTTCAAAAAAAA--------------AAAAAAAAAAAAAAAAAAAAAAAA 702
consensus_13930#0      CAACTTTGAACTTCATAGTGAACTTTTGATGCCACTACTTGTCATTTTCGCAGAATAAAT 717
                       *************** *   **              *      *       * ** *** 

consensus_13930#1      AAAA------------------ 723
consensus_13930#2      AAA------------------- 705
consensus_13930#0      AAGATGAACCTTTGTGAAAAAA 739
                       **                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)