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Oryza sativa
cluster # 13944 cluster # 13944       Sequences # 14       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13944#0 length = 879 sequences # 7  
consensus_13944#1 length = 683 sequences # 6  
consensus_13944#2 length = 432 sequences # 1  

consensusID : consensus_13944#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 879
fasta sequence
                              [CTCTACTCCACTCCACCCACCGGATTGCTAACTTGCTTCCTCCGTCCGCGGCCACCACTTTCTCCTCTCCTCCTCAGAGCAAGATCATTCAAGTATAATCCTGCCTCCTACTAGCTATAATGGCAGCAGCTGCAGCATCATCCGTGTCCCTCCCCGGGGCGAGGGCTCTCCCGACGTGGTCCAGCTCCGTGTCCGGCGACTCGCACTCGTTGGCGCTGAGCTCGTGGGCGGCGCGGCCTCGGTCGGCGCGGCCACTGCGGGCGCCGGCGAGGATGGGCAACGTGAACGAGGGCAAGGGGATCTTCGCACCGGTGGTGGTGGTGGTGCGCAACATCGTTGGCCGCAAGCGCTTCAACCAGCTCAGGGGAAAGGCCATCGCGCTGCACTCGCAGGTGATCACCGAGTTCTGCAAGACCATCGGCGCCGACGCCAAGCAGAGGCAGGGCTT-GATCCGCCTTGCCAAGAAGAACGGCGAGAAGCTCGGTTTCCTTGCCTGATCGACATGCCC-TTCCTAATTCCTACTAGCTCATTTGATTGGTGTGGATTTCCTCTCTGAATGAATGAATTTCCTGTAGCTAGCTAGCCAGCCGCGCCTTCCTCCCTGCGTATAAATGTGTCTTGTGCGTACGTATACCTCCTCTTCTGACCTTCAATTCCATCCATCCATGCCATGGCGGCATGAACGAATGAATTAGTAGTAAGTAATAC-GCGCATGCATGAAC-GAATGAATAATATACTATATAATGCGTGTATACAGACACTAGCGCTGGC-TAGCATGTA-TGATGATC-ATGATGTATATGTATGAGACTGA-GACTGTATGTAGCCAGTTAAGCGACATCA-TTGCCGTCAAGCTCCAATCGGATGGATCTGGATCTCCTA]

[+] EMBL AK061598             [CTCTACTCCACTCCACCCACCGGATTGCTAACTTGCTTCCTCCGTCCGCGGCCACCACTTTCTCCTCTCCTCCTCAGAGCAAGATCATTCAAGTATAATCCTGCCTCCTACTAGCTATAATGGCAGCAGCTGCAGCATCATCCGTGTCCCTCCCCGGGGCGAGGGCTCTCCCGACGTGGTCCAGCTCCGTGTCCGGCGACTCGCACTCGTTGGCGCTGAGCTCGTGGGCGGCGCGGCCTCGGTCGGCGCGGCCACTGCGGGCGCCGGCGAGGATGGGCAACGTGGACGAGGGCAAGGGGATCTTCGCACCGGTGGTGGTGGTGGTGCGCAACATCGTTGGCCGCAAGCGCTTCAACCAGCTCAGGGGAAAGGCCATCGCGCTGCACTCGCAGGTGATCACCGAGTTCTGCAAGACCATCGGCGCCGACGCCAAGCAGAGGCAGGGCTT GATCCGCCTTGCCAAGAAGAACGGCGAGAAGCTCGGTTTCCTTGCCTGATCGACATGCCC TTCCTAATTCCTACTAGCTCATTTGATTGGTGTGGATTTCCTCTCTGAATGAATGAATTTCCTGTAGCTAGCTAGCCAGCCGCGCCTTCCTCCCTGCGTATAAATGTGTCTTGTGCGTACGTATACCTCCTCTTCTGACCTTCAATTCCATCCATCCATGCCATGGCGGCATGAACGAATGAATTAGTAGTAAGTAATAC GCGCATGCATGAAC GAATGAATAATATACTATA                                                                                                                                               ]
[+] EMBL AK066210             [            CCACCCACCGGATTGCTAACTTGCTTCCTCCGTCCGCGGCCACCACTTTCTCCTCTCCTCCTCAGAGCAAGATCATTCAAGTATAATCCTGCCTCCTACTAGCTATAATGGCAGCAGCTGCAGCATCATCCGTGTCCCTCCCCGGGGCGAGGGCTCTCCCGACGTGGTCCAGCTCCGTGTCCGGCGACTCGCACTCGTTGGCGCTGAGCTCGTGGGCGGCGCGGCCTCGGTCGGCGCGGCCACTGCGGGCGCCGGCGAGGATGGGCAACGTGAACGAGGGCAAGGGGATCTTCGCACCGGTGGTGGTGGTGGTGCGCAACATCGTTGGCCGCAAGCGCTTCAACCAGCTCAGGGGAAAGGCCATCGCGCTGCACTCGCAGGTGATCACCGAGTTCTGCAAGACCATCGGCGCCGACGCCAAGCAGAGGCAGGGCTT GATCCGCCTTGCCAAGAAGAACGGCGAGAAGCTCGGTTTCCTTGCCTGATCGACATGCCC TTCCTAATTCCTACTAGCTCATTTGATTGGTGTGGATTTCCTCTCTGAATGAATGAATTTCCTGTAGCTAGCTAGCCAGCCGCGCCTTCCTCCCTGCGTATAAATGTGTCTTGTGCGTACGTATACCTCCTCTTCTGACCTTCAATTCCATCCATCCATGCCATGGCGGCATGAACGAATGAATTAGTAGTAAGTAATAC GCGCATGCATGAAC GAATGAATAATATACTATATAATGCGTGTATACAGACACTAGCGCTGGC TAGCATGTA TGATGATC ATGATGTATATGTATGAGACTGA GACTGTATGTAGCCAGTTAAGCGACATCA TTGCCGTCAAGCTCCAATCGGATGGATCTGGATCTCCTA]
[+] EMBL CA753982             [                                                                                                     TGCCTCCTACTAGCTATAATGGCAGCAGCTGCAGCATCATCCGTGTCCCTCCCCGGGGCGAGGGCTCTCCCGACGTGGTCCAGCTCCGTGTCCGGCGACTCGCACTCGTTGGCGCTGAGCTCGTGGGCGGCGCGGCCTCGGTCGGCGCGGCCACTGCGGGCGCCGGCGAGGATGGGCAACGTGAACGAGGGCAAGGGGATCTTCGCACCGGTGGTGGTGGTGGTGCGCAACATCGTTGGCCGCAAGCGCTTCAACCAGCTCAGGGGAAAGGCCATCGCGCTGCACTCGCAGGTGATCACCGAGTTCTGCAAGACCATCGGCGCCGACGCCAAGCAGAGGCAGGGCTT GATCCGCCTTGCCAAGAAGAACGGCGAGAAGCTCGGTTTCCTTGCCTGATCGACATGCCC TTCCTAATTCCTACTAGCTCATTTGATTGGTGTGGATTTCCTCTCTGAATGAATGAATTTGCTGTAGCTAGCTAGCCAGCCGCGCCTTCCTCCCTGCGTATAAATGTGTCTTGTGCGTACGTATACCTCCTCTTCTGACCTTCAATTCCATCCATCCATGCCATGGCGGCATGAACGAATGAATTAGTAGTAAGTAATAC GCGCATG                                                                                                                                                                          ]
[+] EMBL AU056721             [                                                                                                     TGCCTCCTACTAGCTATAATGGCAGCAGCTGCAGCATCATCCGTGTCCCTCCCCGGGGCGAGGGCTCTCCCGACGTGGTCCAGCTCCGTGTCCGGCGACTCGCACTCGTTGGCGCTGAGCTCGTGGGCGGCGCGGCCTCGGTCGGCGCGGCCACTGCGGGCGCCGGCGAGGATNGGCAACGTGAACGAGGGCAAGGGGATCTTCGCACCGGTGGTGGTGGTGGTGCGCAACATCGTTGGCCGCAAGCGCTTCAACCAGCTCAGGGGAAAGGCCATCGCGCTGCACTCGCAGGTGATCACCGAGTTCTGCAAGACCATCGGCGCCGACNCCAAGCAGAGGCAGGGCTTGGATCCGCCTTGCCAAGAAGAACGGCGAAAAGCTCGGTTTCCTTGCCTGATCGAAATGCCCTTTCCTAATTCCTACTAGNTCAT                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU077623             [                                                                                                                                                                                                                                                                                                                                                                                                                        GCAAGACCATCGGCGCCGACGCCAAGCAGAGGCAGGGCTT GATCCGCCTTGCCAAGAAGAACGGCGAGAAGCTCGGTTTCCTTGCCTGATCGACATGCCC TTCCTAATTCCTACTAGCTCATTTGATTGGTGTGGATTTCCTCTCTGAATGAATGAATTTCCTGTAGCTAGCTAGCCAGCCGCGCCTTCCTCCCTGCGTATAAATGTGTCTTGTGCGTACGTATACCTCCTCTTCTGACCTTCAATTCCATCCATCCATGCCATGGCGGCATGAACGAATGAATTAGTAGTAAGTAATACGGNGCATGCATGAACGGAATGAATAATATACTATATAATGCGTGTATACAGACACTAGCGCTGGCTTAGCATGTATTGATGATCAATGATGTATATGTATGAGACTNAGGACTTTATGTAGCCAGTTAAGC                                               ]
[-] EMBL CB966605             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ACATGCCC TTCCTAATTCCTACTAGCTCATTTGATTGGTGTGGATTTCCTCTCTGAATGAATGAATTTCCTGTAGCTAGCTAGCCAGCCGCGCCTTCCTCCCTGCGTATAAATGTGTCTTGTGCGTACGTATACCTCCTCTTCTGACCTTCAATTCCATCCATCCATGCCATGGCGGCATGAACGAATGAATTAGTAGTAAGTAATAC GCGCATGCATGAAC GAATGAATAATATACTATATAATGCGCGTATACAGACACTAGCGCTGGC TAGCATGTA TGATGATC ATGATGTATATGTATGAGACTGA GACTGTATGTAGCCAGT                                                    ]
[+] EMBL BI799618             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CTGAATGAATGAATTTCCTGTAGCTAGCTAGCCAGCCGCGCCTTCCTCCCTGCGTATAAATGTGTCTTGTGCGTACGTATACCTCCTCTTCTGACCTTCAATTCCATCCATCCATGCCATGGCGGCATGAACGAATGAATTAGTAGTAAGTAATAC GCGCATGCATGAAC GAATGAATAATATACTATATAATGCGTGTATACAGACACTAGGGCTGGC TAGTATGTA TGATGATC ATGATGTATATGTATGAGACTGA GACTGTATGTAGCCAGTTAAGCGACATCACTTGTCGTCAAGCTCCAAaaaaa                 ]


>consensus_13944#0 CTCTACTCCACTCCACCCACCGGATTGCTAACTTGCTTCCTCCGTCCGCGGCCACCACTT TCTCCTCTCCTCCTCAGAGCAAGATCATTCAAGTATAATCCTGCCTCCTACTAGCTATAA TGGCAGCAGCTGCAGCATCATCCGTGTCCCTCCCCGGGGCGAGGGCTCTCCCGACGTGGT CCAGCTCCGTGTCCGGCGACTCGCACTCGTTGGCGCTGAGCTCGTGGGCGGCGCGGCCTC GGTCGGCGCGGCCACTGCGGGCGCCGGCGAGGATGGGCAACGTGAACGAGGGCAAGGGGA TCTTCGCACCGGTGGTGGTGGTGGTGCGCAACATCGTTGGCCGCAAGCGCTTCAACCAGC TCAGGGGAAAGGCCATCGCGCTGCACTCGCAGGTGATCACCGAGTTCTGCAAGACCATCG GCGCCGACGCCAAGCAGAGGCAGGGCTTGATCCGCCTTGCCAAGAAGAACGGCGAGAAGC TCGGTTTCCTTGCCTGATCGACATGCCCTTCCTAATTCCTACTAGCTCATTTGATTGGTG TGGATTTCCTCTCTGAATGAATGAATTTCCTGTAGCTAGCTAGCCAGCCGCGCCTTCCTC CCTGCGTATAAATGTGTCTTGTGCGTACGTATACCTCCTCTTCTGACCTTCAATTCCATC CATCCATGCCATGGCGGCATGAACGAATGAATTAGTAGTAAGTAATACGCGCATGCATGA ACGAATGAATAATATACTATATAATGCGTGTATACAGACACTAGCGCTGGCTAGCATGTA TGATGATCATGATGTATATGTATGAGACTGAGACTGTATGTAGCCAGTTAAGCGACATCA TTGCCGTCAAGCTCCAATCGGATGGATCTGGATCTCCTA



consensusID : consensus_13944#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 683
fasta sequence
                              [ACTAAGGGAATAGCTTGCGGCGCCTACTAGCTATAATGGCAGCAGCTGCAGCATCATCCGTGTCCCTCCCCGGGGCGAGGGCTCTCCCGACGTGGTCCAGCTCCGTGTCCGGCGACTCGCACTCGTTGGCGCTGAGCTCGTGGGCGGCGCGGCCTCGGTCGGCGCGGCCACTGCGGGCGCCGGCGAGGATGGGCAACGTGAACGAGGGCAAGGGGATCTTCGCACCGGTGGTGGTGGTGGTGCGCAACATCGTTGG-CCGCAAGCGCTTCAACCAGCTCAGGGGAAAGGCCATCGCGCTGCACTCGCAGGTGATCACCGAGTTCTGCAAGACCATCGGCGCCGACGCCAAGCAGAGGCAGGGCTTGATCCGCCTTGCCAAGAAGAACGGCGAGAAGCTCGGTTTCCTTGCCTGATCGACATGCCCTTCCTAATTCCTACTAGCTCATTTGATTGGTGTGGATTTCCTCTCTGAATGAATGAATTTCCTGTAGCTAGCTAGCCAGCCGCGCCTTCCTCCCTGCGTATAAATGTGTCTTGTGCGTACGTATACCTCCTCTTCTGACCTTCAATTCCATCCATCCATGCCATGGCGGCATGAACGAATGAATTAGTAGTAAGTAATACGCGCATGCATGAACGAATGAATAATATAC-TATATAATGCGCGTACAAAACAAAGAAAAA]

[+] EMBL BU673384             [ACTAAGGGAATAGCTTGCGGCGCCTACTAGCTATAATGGCAGCAGCTGCAGCATCATCCGTGT CCTCCCCGGGGCGAGGGCTCTCCCGACGTGGTCCAGCTCCGTGTCCGGCGACTCGCACTCGTTGGCGCTGAGCTCGTGGGCGGCGCGGCCTCGGTCGGCGCGGCCACTGCGGGCGCCGGCGAGGATGGGCAACGTGAACGAGGGCAAGGGGATCTTCGCACCGGTGGTGGTGGTGGTGCGCAACATCGTTGG CCGCAAGCGCTTCAACCAGCTCAGGGGAAAGGCCATCGCGCTGCACTCGCAGGTGATCACCGAGTTCTGCAAGACCATCGGCGCCGACGCCAAGCAGAGGCAGGGCTTGATCCGCCTTGCCAAGAAGAACGGCGAGAAGCTCGGTTTCCTTGCCTGATCGACATGCCCTTCCTAATTCCTACTAGCTCATTTGATTGGTGTGGATTTCCTCTCTGAATGAATGAATTTCCTGTAGCTAGCTAGCCAGCCGCGCCTTCCTCCCTGCGTATAAATGTGTCTTGTGCGTACGTATACCTCCTCTTCTGACCTTCAATTCCATCCATCCATGCCATGGCGGCATGAACGAATGAATTAGTAGTAAGTAATACGCGCATGCATGAACGAATGAATAATATACTTATATAATGCGCGTA AAAACAAAGAAAAA]
[+] EMBL CB966638             [   AAGGGAATAGCTTGCGGCGCCTACTAGCTATAATGGCAGCAGCTGCAGCATCATCCGTGTCCCTCCCCGGGGCGAGGGCTCTCCCGACGTGGTCCAGCTCCGTGTCCGGCGACTCGCACTCGTTGGCGCTGAGCTCGTGGGCGGCGCGGCCTCGGTCGGCGCGGCCACTGCGGGCGCCGGCGAGGATGGGCAACGTGAACGAGGGCAAGGGGATCTTCGCACCGGTGGTGGTGGTGGTGCGCAACATCGTTGG CCGCAAGCGCTTCAACCAGCTCAGGGGAAAGGCCATCGCGCTGCACTCGCAGGTGATCACCGAGTTCTGCAAGACCATCGGCGCCGACGCCAAGCAGAGGCAGGGCTTGATCCGCCTTGCCAAGAAGAACGGCGAGAAGCTCGGTTTCCTTGCCTGATCGACATGCCCTTCCTAATTCCTACTAGCTCATTTGATTGGTGTGGATTTCCTCTCTGAATGAATGAATTTCCTGTAGCTAGCTAGCCAGCCGCGCCTTCCTCCCTGCGTATAAATGTGTCTTGTGCGTACGTATACCTCCTCTTCTGACCTTCAATTCCATCCATCCATGCCATGGCGGCATGAACGAATGAATTAGTAGTAAGTAATACGCGCATGCATGAACGAATGAATAGTATAC TATATAATGCGCGTACAAAACAACCAAAA ]
[+] EMBL CB964499             [   AAGGG ATAG  TGCGGC TCTACTA CTATAATGGCAG AGCTGCAGCATCATCCGTGTCCCTCCCCGGGGCGAGGGCTCTCCCGACGTGGTCCAGCTCCGTGTCCGGCGACTCGCACTCGTTGGCGCTGAGCTCGTGGGCGG GCGGCCTCGGTCGGCGCGGCCACTGCGGGCGCCGGCGAGGATGGGCAACGTGAACGAGGGCAAGGGGATCTTCGCACCGGTGGTGGTGGTGGTGCGCAACATCGTTGG CCGCAAGCGCTTCAACCAGCTCAGGGGAAAGGCCATCGCGCTGCACTCGCAGGTGATCACCGAGTTCTGCAAGACCATCGGCGCCGACGCCAAGCAGAGGCAGGGCTTGATCCGCCTTGCCAAGAAGAACGGCGAGAAGCTCGGTTTCCTTGCCTGATCGACATGCCCTTCCTAATTCCTACTAGCTCATTTGATTGGTGTGGATTTCCTCTCTGAATGAATGAATTTCCTGTAGCTAGCTAGCCAGCCGCGCCTTCCTCCCTGCGTATAAATGTGTCTTGTGCGTACGTATACCTCCTCTTCTGACCTTCAATTCCATCCATCCATGCCATGGCGGCATGAACGAATGAATTAGTAGTAAGTAATACGCGCATGCATGAACGAATGAATAATATAC TATATAATGCGCGTAAAA            ]
[+] EMBL CF326315             [                                                       ATCCGTGTCCCTCCCCGGGGCGAGGGCTCTCCCGACGTGGTCCAGCTCCGTGTCCGGCGACTCGCACTCGTTGGCGCTGAGCTCGTGGGCGGCGCGGCCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU173958             [                                                                              GGGCTCTCCCGACGTGGTCCAGCTCCGTGTCCGGCGACTCGCACTCGTTGGCGCTGAGCTCGTGGGCGGCGCGGCCTCGGTCGGCGCGGCCACTGCGGGCGCCGGCGAGGATGGGCAACGTGAACGAGGGCAAGGGGATCTTCGCACCGGTGGTGGTGGTGGTGCGCAACATCGTTGG CCGCAAGCGCTTCAACCAGCTCAGGGGAAAGGCCATCGCGCTGCACTCGCAGGTGATCACCGAGTTCTGCAAGACCATCGGCGCCGACGCCAAGCAGAGGCAGGGCTTGATCCGCCTTGCCAAGAAGAACGGCGAGAAGCTCGGTTTCCTTGCCTGATCGACATGCCCTTCCTAATTCCTACTAGCTCATTTGATTGGTGTGGATTTCCTCTCTGAATGAATGAATTTCCTGTAGCTAGCTAGCCAGCCGCGCCTTCCTCCCTGCGTATA                                                                                                                                                              ]
[+] EMBL AU056722             [                                                                                                                                                                                                                        ctTTCGCACCGGTGGTGGTGGTGGTGCGCAACATCGTTGGCCCGCAAGCGCTTCAACCAGCTCAGGGGAAAGGCCATCGCGCTGCACTCGCAGGTGATCACCGAGTTCTGCAAGACCATCGGCGCCGACGCCAAGCAGAGGCAGGGCTTGATCCGCCTTGCCAAGAAGAACGGCGAGAAGCTCGGTTTCCTTGCCTGATCGACATGCCCTTCCTAATTCCTACTAGCTCATTTGATTGGTGTGGATTTCCTCTCTGAATGAATGAATTTCCTGTAGCTAGCTAGCCAGCCGCGCCTTCCTCCCTGCGTATAAATGTGTCTTGTGCGTACGTATACCTCCTCTTCTGACCTTCAATTCCATCCATCCATGCCATGGCGGCATGAACGAATGAATTAGTAGTAAGTAATACGCGCATGCATGAACGAATGAATAATATAC TA                            ]


>consensus_13944#1 ACTAAGGGAATAGCTTGCGGCGCCTACTAGCTATAATGGCAGCAGCTGCAGCATCATCCG TGTCCCTCCCCGGGGCGAGGGCTCTCCCGACGTGGTCCAGCTCCGTGTCCGGCGACTCGC ACTCGTTGGCGCTGAGCTCGTGGGCGGCGCGGCCTCGGTCGGCGCGGCCACTGCGGGCGC CGGCGAGGATGGGCAACGTGAACGAGGGCAAGGGGATCTTCGCACCGGTGGTGGTGGTGG TGCGCAACATCGTTGGCCGCAAGCGCTTCAACCAGCTCAGGGGAAAGGCCATCGCGCTGC ACTCGCAGGTGATCACCGAGTTCTGCAAGACCATCGGCGCCGACGCCAAGCAGAGGCAGG GCTTGATCCGCCTTGCCAAGAAGAACGGCGAGAAGCTCGGTTTCCTTGCCTGATCGACAT GCCCTTCCTAATTCCTACTAGCTCATTTGATTGGTGTGGATTTCCTCTCTGAATGAATGA ATTTCCTGTAGCTAGCTAGCCAGCCGCGCCTTCCTCCCTGCGTATAAATGTGTCTTGTGC GTACGTATACCTCCTCTTCTGACCTTCAATTCCATCCATCCATGCCATGGCGGCATGAAC GAATGAATTAGTAGTAAGTAATACGCGCATGCATGAACGAATGAATAATATACTATATAA TGCGCGTACAAAACAAAGAAAAA



consensusID : consensus_13944#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 432
fasta sequence
                              [CAANCAGAGGCAGGGCTTGATCCGCCTTGCCAAGAAGAACGGCGAGAAGCTCGGTTTCCTTGCCTGATCGACATGCCCTTCCTAATTCCTACTAGCTCATTTGATTGGTGTGGATTTCCTCTNTGAATGAATGAATTTCCTGTAGCTAGCTAGCCANCCGCGCCTTCCTCCCTGGGTATAAATGTGTNTTGTGCGTACGTATACCTCCTNTTTTGACCTTCAATTCCATCCATCCATGCCATGGCGGCATGAACGAATGAATTAGTAGTAAGTAATACGCGCATGCATGAACGAATGAATAATATACTATATAATGNGTGTATACAGACNCTAGCGCTGGNTAGCATGTATGATGATCATGATGTATATGTATGAGACTGAGACTGTATGTAGCCAGTTNAGCGACATCATTGCCGTCNAAAAAAAAAAAAA]

[+] EMBL AU173959             [CAANCAGAGGCAGGGCTTGATCCGCCTTGCCAAGAAGAACGGCGAGAAGCTCGGTTTCCTTGCCTGATCGACATGCCCTTCCTAATTCCTACTAGCTCATTTGATTGGTGTGGATTTCCTCTNTGAATGAATGAATTTCCTGTAGCTAGCTAGCCANCCGCGCCTTCCTCCCTGGGTATAAATGTGTNTTGTGCGTACGTATACCTCCTNTTTTGACCTTCAATTCCATCCATCCATGCCATGGCGGCATGAACGAATGAATTAGTAGTAAGTAATACGCGCATGCATGAACGAATGAATAATATACTATATAATGNGTGTATACAGACNCTAGCGCTGGNTAGCATGTATGATGATCATGATGTATATGTATGAGACTGAGACTGTATGTAGCCAGTTNAGCGACATCATTGCCGTCNAAAAAAAAAAAAA]


>consensus_13944#2 CAANCAGAGGCAGGGCTTGATCCGCCTTGCCAAGAAGAACGGCGAGAAGCTCGGTTTCCT TGCCTGATCGACATGCCCTTCCTAATTCCTACTAGCTCATTTGATTGGTGTGGATTTCCT CTNTGAATGAATGAATTTCCTGTAGCTAGCTAGCCANCCGCGCCTTCCTCCCTGGGTATA AATGTGTNTTGTGCGTACGTATACCTCCTNTTTTGACCTTCAATTCCATCCATCCATGCC ATGGCGGCATGAACGAATGAATTAGTAGTAAGTAATACGCGCATGCATGAACGAATGAAT AATATACTATATAATGNGTGTATACAGACNCTAGCGCTGGNTAGCATGTATGATGATCAT GATGTATATGTATGAGACTGAGACTGTATGTAGCCAGTTNAGCGACATCATTGCCGTCNA AAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13944#0      CTCTACTCCACTCCACCCACCGGATTGCTAACTTGCTTCCTCCGTCCGCGGCCACCACTT 60
consensus_13944#1      ------------------------------------------------------------
consensus_13944#2      ------------------------------------------------------------
                                                                                   

consensus_13944#0      TCTCCTCTCCTCCTCAGAGCAAGATCATTCAAGTATAATCCTGC--CTCCTACTAGCTAT 118
consensus_13944#1      --------------------------ACTAAGGGAATAGCTTGCGGCGCCTACTAGCTAT 34
consensus_13944#2      ------------------------------------------------------------
                                                                                   

consensus_13944#0      AATGGCAGCAGCTGCAGCATCATCCGTGTCCCTCCCCGGGGCGAGGGCTCTCCCGACGTG 178
consensus_13944#1      AATGGCAGCAGCTGCAGCATCATCCGTGTCCCTCCCCGGGGCGAGGGCTCTCCCGACGTG 94
consensus_13944#2      ------------------------------------------------------------
                                                                                   

consensus_13944#0      GTCCAGCTCCGTGTCCGGCGACTCGCACTCGTTGGCGCTGAGCTCGTGGGCGGCGCGGCC 238
consensus_13944#1      GTCCAGCTCCGTGTCCGGCGACTCGCACTCGTTGGCGCTGAGCTCGTGGGCGGCGCGGCC 154
consensus_13944#2      ------------------------------------------------------------
                                                                                   

consensus_13944#0      TCGGTCGGCGCGGCCACTGCGGGCGCCGGCGAGGATGGGCAACGTGAACGAGGGCAAGGG 298
consensus_13944#1      TCGGTCGGCGCGGCCACTGCGGGCGCCGGCGAGGATGGGCAACGTGAACGAGGGCAAGGG 214
consensus_13944#2      ------------------------------------------------------------
                                                                                   

consensus_13944#0      GATCTTCGCACCGGTGGTGGTGGTGGTGCGCAACATCGTTGGCCGCAAGCGCTTCAACCA 358
consensus_13944#1      GATCTTCGCACCGGTGGTGGTGGTGGTGCGCAACATCGTTGGCCGCAAGCGCTTCAACCA 274
consensus_13944#2      ------------------------------------------------------------
                                                                                   

consensus_13944#0      GCTCAGGGGAAAGGCCATCGCGCTGCACTCGCAGGTGATCACCGAGTTCTGCAAGACCAT 418
consensus_13944#1      GCTCAGGGGAAAGGCCATCGCGCTGCACTCGCAGGTGATCACCGAGTTCTGCAAGACCAT 334
consensus_13944#2      ------------------------------------------------------------
                                                                                   

consensus_13944#0      CGGCGCCGACGCCAAGCAGAGGCAGGGCTTGATCCGCCTTGCCAAGAAGAACGGCGAGAA 478
consensus_13944#1      CGGCGCCGACGCCAAGCAGAGGCAGGGCTTGATCCGCCTTGCCAAGAAGAACGGCGAGAA 394
consensus_13944#2      ------------CAANCAGAGGCAGGGCTTGATCCGCCTTGCCAAGAAGAACGGCGAGAA 48
                                   *** ********************************************

consensus_13944#0      GCTCGGTTTCCTTGCCTGATCGACATGCCCTTCCTAATTCCTACTAGCTCATTTGATTGG 538
consensus_13944#1      GCTCGGTTTCCTTGCCTGATCGACATGCCCTTCCTAATTCCTACTAGCTCATTTGATTGG 454
consensus_13944#2      GCTCGGTTTCCTTGCCTGATCGACATGCCCTTCCTAATTCCTACTAGCTCATTTGATTGG 108
                       ************************************************************

consensus_13944#0      TGTGGATTTCCTCTCTGAATGAATGAATTTCCTGTAGCTAGCTAGCCAGCCGCGCCTTCC 598
consensus_13944#1      TGTGGATTTCCTCTCTGAATGAATGAATTTCCTGTAGCTAGCTAGCCAGCCGCGCCTTCC 514
consensus_13944#2      TGTGGATTTCCTCTNTGAATGAATGAATTTCCTGTAGCTAGCTAGCCANCCGCGCCTTCC 168
                       ************** ********************************* ***********

consensus_13944#0      TCCCTGCGTATAAATGTGTCTTGTGCGTACGTATACCTCCTCTTCTGACCTTCAATTCCA 658
consensus_13944#1      TCCCTGCGTATAAATGTGTCTTGTGCGTACGTATACCTCCTCTTCTGACCTTCAATTCCA 574
consensus_13944#2      TCCCTGGGTATAAATGTGTNTTGTGCGTACGTATACCTCCTNTTTTGACCTTCAATTCCA 228
                       ****** ************ ********************* ** ***************

consensus_13944#0      TCCATCCATGCCATGGCGGCATGAACGAATGAATTAGTAGTAAGTAATACGCGCATGCAT 718
consensus_13944#1      TCCATCCATGCCATGGCGGCATGAACGAATGAATTAGTAGTAAGTAATACGCGCATGCAT 634
consensus_13944#2      TCCATCCATGCCATGGCGGCATGAACGAATGAATTAGTAGTAAGTAATACGCGCATGCAT 288
                       ************************************************************

consensus_13944#0      GAACGAATGAATAATATACTATATAATGCGTGTATACAGACACTAGCGCTGGCTAGCATG 778
consensus_13944#1      GAACGAATGAATAATATACTATATAATGCGCGTACAAAACAAAGAAAAA----------- 683
consensus_13944#2      GAACGAATGAATAATATACTATATAATGNGTGTATACAGACNCTAGCGCTGGNTAGCATG 348
                       **************************** * *** * *      *               

consensus_13944#0      TATGATGATCATGATGTATATGTATGAGACTGAGACTGTATGTAGCCAGTTAAGCGACAT 838
consensus_13944#1      ------------------------------------------------------------
consensus_13944#2      TATGATGATCATGATGTATATGTATGAGACTGAGACTGTATGTAGCCAGTTNAGCGACAT 408
                                                                                   

consensus_13944#0      CATTGCCGTCAAGCTCCAATCGGATGGATCTGGATCTCCTA 879
consensus_13944#1      -----------------------------------------
consensus_13944#2      CATTGCCGTCNAAAAAAAAAAAAA----------------- 432
                                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)