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Oryza sativa
cluster # 13945 cluster # 13945       Sequences # 14       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13945#0 length = 2028 sequences # 5  
consensus_13945#1 length = 1088 sequences # 5  
consensus_13945#2 length = 678 sequences # 2  
consensus_13945#3 length = 625 sequences # 1  
consensus_13945#4 length = 581 sequences # 1  

consensusID : consensus_13945#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2028
fasta sequence
                              [CTTAGCTTAGTGTTTACCTAGCTAGCTAGCAGCTGGCTGCAACAAACATTCTGCATGCACTTTGAATTCTAGAGATAGGAGAGTTAATTAGATAGCTTAGCTACCACAATGCATGCGTGCAACCTGATAGCTTAGCTACGCGTAGTTGCCAATTCAACCGGCCGACATATATATCGGCCTGAGGAAACTAGTGGAGGACTCCAAAGGGATCGCATTGATCTGGCTAGCTATCTCGATCGATCGCCTCATCGATCGACGACGACGTGCGTGATCGATCAGTGCAATCCCTTTGGAATTTTCCTCTTGCTTCCGCCTCCTCATCTTCCTTGATCGATCGATCCTTTGCCTGCTGGACGCGCTTGCCTGCCGGCTTGCTTCTTCCATCGCCGCCTTGATCAATCCGCAAGCTGCTCCAGATTCAGGAGTTAAATCGAAGCCCAACGCTAGCACACAGGTGTGTATCGTATACAATTACTGCATATGTATGCATGCTCCACATCAGTATATTGATCATCCCCGTATACAAGAAATGAACAACAGTAGGAGTAGTATTGAGTATTCTAGTGTTACTTTCTTTTACTTTGAGAACGAATTAATGGCATCTAATTTGTGTAAGCAAATTACTACTGGTTTCACTAGTCCTGAATTGTAGATGTAAGCTACTAGCTGTTAGACTATAAGAAGCCATTAATTAGTCGATAACAACATGCAATTGCATCTTGTCTTTATTTGACTATATATGTTGTTTTTTTCCAGTATGTATATGTTTAAAGCCCTATCGATCTAACTCTGAATATGCTAAGATAGAGTACAGAAAACATGATGCATATGCACCAGTACTGCTTGCAGGACTGTTCAGACATAATTTAATTTGTTATGCATCTGACCTGATCATCAAGTGGATTGATTGGTGATATATAAATGGTAACAAAAGTATAGTAGTGGAGAAGAAACGTGGAGAATTGGGTTTTACATTAAACTTTGCACGGTACAAGACATTAGACATCGATCGGTGCCTAAGCTAGTTGGAATTTTGCAATGATCTTCCCTTTTTCTGATCTTGCTTTTTGTGTGCATTAATTGTTCCGCTTGTTGCTTGAGAGTTGGAGTAGTACGCATCTCGATTGCAACTCATTTTGCGCGTGAATGAGTACCAATTTGGATTCGATCGTCATCGAGAAAGAGACAA-GATACATATTTTTTGCGAACGCGTAAAAAAATAGCACGTCAATATATTAGAAGAAACTGATACATACTCCGTAGCTATCTTAATTTTATCTCTCCATCGCATGCAACTAAACTAATGTACTACTATATTTTCTCTTATCAAGAGAAAAGGAACACAAACGATCATTGCACAATATTTCCGGAACCCAAATAAGCTAGCTCTGTCAATGCTTATAAACGTACTCCTATATAAAATATATAGTTGATGATATGCCATGATGCATTATTGAACACAGTGATGTCTGCTGAAAGTGCATATTTGGCAGTGCAAGAAGGTCTTTTGACAGACAGGGTAAAACATATAGAGTCCCGAGTCCCGACAAGTTCAGTTTATGA-CGATGGAATCAATCAAAGGAATATGGTTCGCACGGCTGAATCGCTGAACCACTCTGAAATCTG-AGGGCGTGTTTGCTTGCTGCCCTCAGATTCGCGCCCGGCTCATGCGTCGATCTCAGGCGTCCGATTTCGGTCGCCTGCGGTCGGATCGACCTGCCTGAGCAATGGTCTCCA-GGCGAGGGCAGCAACCAAACAG-CCCCTGAATACCTGGCTAGCTAAGGTTTCTGATCTATTCTGGCTGATCAGTGTCCA-TTTTCTTTCGTCCATAAGGCCGAGTGCAGAACAACTTGTATATATATATTTATGTGTTGATCTGGTAATTCAATGTAGTAG-CAAAGAGGCAATTGAGGATTCTGCACACACGCATCTACTGTAGCAGAATACTGATGTCTTTTATGTAATCCTGTCAAAGTTACTAGTAAAATTTTCTTTCAGAGAGGAAAA----AAAAAANAAAACTCGGCCGAA]

[+] EMBL AK066367             [CTTAGCTTAGTGTTTACCTAGCTAGCTAGCAGCTGGCTGCAACAAACATTCTGCATGCACTTTGAATTCTAGAGATAGGAGAGTTAATTAGATAGCTTAGCTACCACAATGCATGCGTGCAACCTGATAGCTTAGCTACGCGTAGTTGCCAATTCAACCGGCCGACATATATATCGGCCTGAGGAAACTAGTGGAGGACTCCAAAGGGATCGCATTGATCTGGCTAGCTATCTCGATCGATCGCCTCATCGATCGACGACGACGTGCGTGATCGATCAGTGCAATCCCTTTGGAATTTTCCTCTTGCTTCCGCCTCCTCATCTTCCTTGATCGATCGATCCTTTGCCTGCTGGACGCGCTTGCCTGCCGGCTTGCTTCTTCCATCGCCGCCTTGATCAATCCGCAAGCTGCTCCAGATTCAGGAGTTAAATCGAAGCCCAACGCTAGCACACAGGTGTGTATCGTATACAATTACTGCATATGTATGCATGCTCCACATCAGTATATTGATCATCCCCGTATACAAGAAATGAACAACAGTAGGAGTAGTATTGAGTATTCTAGTGTTACTTTCTTTTACTTTGAGAACGAATTAATGGCATCTAATTTGTGTAAGCAAATTACTACTGGTTTCACTAGTCCTGAATTGTAGATGTAAGCTACTAGCTGTTAGACTATAAGAAGCCATTAATTAGTCGATAACAACATGCAATTGCATCTTGTCTTTATTTGACTATATATGTTGTTTTTTTCCAGTATGTATATGTTTAAAGCCCTATCGATCTAACTCTGAATATGCTAAGATAGAGTACAGAAAACATGATGCATATGCACCAGTACTGCTTGCAGGACTGTTCAGACATAATTTAATTTGTTATGCATCTGACCTGATCATCAAGTGGATTGATTGGTGATATATAAATGGTAACAAAAGTATAGTAGTGGAGAAGAAACGTGGAGAATTGGGTTTTACATTAAACTTTGCACGGTACAAGACATTAGACATCGATCGGTGCCTAAGCTAGTTGGAATTTTGCAATGATCTTCCCTTTTTCTGATCTTGCTTTTTGTGTGCATTAATTGTTCCGCTTGTTGCTTGAGAGTTGGAGTAGTACGCATCTCGATTGCAACTCATTTTGCGCGTGAATGAGTACCAATTTGGATTCGATCGTCATCGAGAAAGAGACAA GATACATATTTTTTGCGAACGCGTAAAAAAATAGCACGTCAATATATTAGAAGAAACTGATACATACTCCGTAGCTATCTTAATTTTATCTCTCCATCGCATGCAACTAAACTAATGTACTACTATATTTTCTCTTATCAAGAGAAAAGGAACACAAACGATCATTGCACAATATTTCCGGAACCCAAATAAGCTAGCTCTGTCAATGCTTATAAACGTACTCCTATATAAAATATATAGTTGATGATATGCCATGATGCATTATTGAACACAGTGATGTCTGCTGAAAGTGCATATTTGGCAGTGCAAGAAGGTCTTTTGACAGACAGGGTAAAACATATAGAGTCCCGAGTCCCGACAAGTTCAGTTTATGA CGATGGAATCAATCAAAGGAATATGGTTCGCACGGCTGAATCGCTGAACCACTCTGAAATCTG AGGGCGTGTTTGCTTGCTGCCCTCAGATTCGCGCCCGGCTCATGCGTCGATCTCAGGCGTCCGATTTCGGTCGCCTGCGGTCGGATCGACCTGCCTGAGCAATGGTCTCCA GGCGAGGGCAGCAACCAAACAG CCCCTGAATACCTGGCTAGCTAAGGTTTCTGATCTATTCTGGCTGATCAGTGTCCA TTTTCTTTCGTCCATAAGGCCGAGTGCAGAACAACTTGTATATATATATTTATGTGTTGATCTGGTAATTCAATGTAGTAG CAAAGAGGCAATTGAGGATTCTGCACACACGCATCTACTGTAGCAGAATACTGATGTCTTTTATGTAATCCTGTCAAAGTTACTAGTAAAATTTTCTTTCAGAGA                               ]
[+] EMBL CB639509             [                                                                       GAGATACGAGAGGT ATGTGATAGCTTAGCTACCACAATGCATGCGTGCAACCTGATAGCTTAGCTACGCGTAGTTGCCAATTCAACCGGCCGACATATATATCGGCCTGAGGAAACTAGTGGAGGACTCCAAAGGGATCGCATTGATCTGGCTAGCTATCTCGATCGATCGCCTCATCGATCGACGACGACGTGCGTGATCGATCAGTGCAATCCCTTTGGAATTTTCCTCTTGCTTCCGCCTCCTCATCTTCCTTGATCGATCGATCCTTTGCCTGCTGGACGCGCTTGCCTGCCGGCTTGCTTCTTCCTTCGCCGCCTTGNTCGATCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB668822             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GAGAAAGAGACAAGGATCCATATTTTTTGCGAACGCGTAAAAAAATAGCACGTCAATATATTAGAAGAAACTGATACATACTCCGTAGCTATCTTAATTTTATCTCTCCATCGCATGCAACTAAACTAATGTACTACTATATTTTCTCTTATCAAGAGAAAAGGAACACAAACGATCATTGCACAATATTTCCGGAACCCAAATAAGCTAGCTCTGTCAATGCTTATAAACGTACTCCTATATAAAATATATAGTTGATGATATGCCATGATGCATTATTGAACACAGTGATGTCTGCTGAAAGTGCATATTTGGCAGTGCAAGAAGGTCTTTTGACAGACAGGGTAAAACATATAGAGTCCCGAGTCCCGACAAGTTCAGTTTATGA CGATGGAATCAATCAAAGGAATATGGTTCGCACGGCTGAATCGCTGAACCACTCTGAAATCTG AGGGCGTGTTTGCTTGCTGCCCTCAGATTCGCGCCCGGCTCATGCGTCGATCTCAGGCGTCCGATTTCGGTCGCCTGCGGTCGGATCGACCTGCCTGAGCAATGGTCTCCA GGCGAGGGCAGCAACCAAACAG CCCCTGAATACCTGGCTAGCTAAGGTTTCTGATCTATTCTGGCTGATCAGTGTCCA TTTTCTTTCGTCCATAAGGCCGAGTGCAGAACAACTTGTATATATATATTTATGTGTTGATCTGGTAATTCAATGTAGTAG CAAAGAGGCAATTGAG                                                                                                                        ]
[+] EMBL BM038729             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CCCGAGTCCCGACAAGTTCAGTTTATGACCGATGGAATCCATCCAAGGAATATGGTTCGCACGGCTGAATCGCTGAACCCCTCTGAAATCTGAAGGGCGTGTTTGCTTGCTGCCCTCGGATTCGCGCCTGGCTCAGGCGTCGATCTCAGGCGTCCGATTTCGGTCACCTGCGATCGGATCGACCTGCCTGAGCCATGGTCTCCACGGCGAGGGCAGCAACCCAACAGCCCCCTGAATACCTGGCTAGCTAAGGTTTCTGATCTCTTCTGGCTGATCAGTGTCCACTTTTCTTTCGTCCATAAGGCCGAGTGCAGAACAACTTG  TATATATATTTATGTGTTGATCTGGTAATTCNATGTAGTAGCCCAAGAGGCCATTGAGGATTCTGCACACACGCATCTACTGTAGCAGAATACTGATGTCTTTTATGTAATCCTGTCCAAGTTACTAGTAAAATTTTCTTTCAGAGAGGAAAA    AAAAAA               ]
[-] EMBL BE229637             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TATTTANGTGTTGATCTGGTAATTCAATGTAGTAG CAAAGAGGCAATTGAGGATTCTGCACACACGCATCTACTGTAGCAGAATACTGATGTCTTTTATGTAATCCTGTCAAAGTTACTAGTAAAATTTTCTTTCAGAGAGGAAAATCTCAAAAAANAAAACTCGGCCGAA]


>consensus_13945#0 CTTAGCTTAGTGTTTACCTAGCTAGCTAGCAGCTGGCTGCAACAAACATTCTGCATGCAC TTTGAATTCTAGAGATAGGAGAGTTAATTAGATAGCTTAGCTACCACAATGCATGCGTGC AACCTGATAGCTTAGCTACGCGTAGTTGCCAATTCAACCGGCCGACATATATATCGGCCT GAGGAAACTAGTGGAGGACTCCAAAGGGATCGCATTGATCTGGCTAGCTATCTCGATCGA TCGCCTCATCGATCGACGACGACGTGCGTGATCGATCAGTGCAATCCCTTTGGAATTTTC CTCTTGCTTCCGCCTCCTCATCTTCCTTGATCGATCGATCCTTTGCCTGCTGGACGCGCT TGCCTGCCGGCTTGCTTCTTCCATCGCCGCCTTGATCAATCCGCAAGCTGCTCCAGATTC AGGAGTTAAATCGAAGCCCAACGCTAGCACACAGGTGTGTATCGTATACAATTACTGCAT ATGTATGCATGCTCCACATCAGTATATTGATCATCCCCGTATACAAGAAATGAACAACAG TAGGAGTAGTATTGAGTATTCTAGTGTTACTTTCTTTTACTTTGAGAACGAATTAATGGC ATCTAATTTGTGTAAGCAAATTACTACTGGTTTCACTAGTCCTGAATTGTAGATGTAAGC TACTAGCTGTTAGACTATAAGAAGCCATTAATTAGTCGATAACAACATGCAATTGCATCT TGTCTTTATTTGACTATATATGTTGTTTTTTTCCAGTATGTATATGTTTAAAGCCCTATC GATCTAACTCTGAATATGCTAAGATAGAGTACAGAAAACATGATGCATATGCACCAGTAC TGCTTGCAGGACTGTTCAGACATAATTTAATTTGTTATGCATCTGACCTGATCATCAAGT GGATTGATTGGTGATATATAAATGGTAACAAAAGTATAGTAGTGGAGAAGAAACGTGGAG AATTGGGTTTTACATTAAACTTTGCACGGTACAAGACATTAGACATCGATCGGTGCCTAA GCTAGTTGGAATTTTGCAATGATCTTCCCTTTTTCTGATCTTGCTTTTTGTGTGCATTAA TTGTTCCGCTTGTTGCTTGAGAGTTGGAGTAGTACGCATCTCGATTGCAACTCATTTTGC GCGTGAATGAGTACCAATTTGGATTCGATCGTCATCGAGAAAGAGACAAGATACATATTT TTTGCGAACGCGTAAAAAAATAGCACGTCAATATATTAGAAGAAACTGATACATACTCCG TAGCTATCTTAATTTTATCTCTCCATCGCATGCAACTAAACTAATGTACTACTATATTTT CTCTTATCAAGAGAAAAGGAACACAAACGATCATTGCACAATATTTCCGGAACCCAAATA AGCTAGCTCTGTCAATGCTTATAAACGTACTCCTATATAAAATATATAGTTGATGATATG CCATGATGCATTATTGAACACAGTGATGTCTGCTGAAAGTGCATATTTGGCAGTGCAAGA AGGTCTTTTGACAGACAGGGTAAAACATATAGAGTCCCGAGTCCCGACAAGTTCAGTTTA TGACGATGGAATCAATCAAAGGAATATGGTTCGCACGGCTGAATCGCTGAACCACTCTGA AATCTGAGGGCGTGTTTGCTTGCTGCCCTCAGATTCGCGCCCGGCTCATGCGTCGATCTC AGGCGTCCGATTTCGGTCGCCTGCGGTCGGATCGACCTGCCTGAGCAATGGTCTCCAGGC GAGGGCAGCAACCAAACAGCCCCTGAATACCTGGCTAGCTAAGGTTTCTGATCTATTCTG GCTGATCAGTGTCCATTTTCTTTCGTCCATAAGGCCGAGTGCAGAACAACTTGTATATAT ATATTTATGTGTTGATCTGGTAATTCAATGTAGTAGCAAAGAGGCAATTGAGGATTCTGC ACACACGCATCTACTGTAGCAGAATACTGATGTCTTTTATGTAATCCTGTCAAAGTTACT AGTAAAATTTTCTTTCAGAGAGGAAAAAAAAAANAAAACTCGGCCGAA



consensusID : consensus_13945#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1088
fasta sequence
                              [CACTTAGCTTAGTGTTTACCTAGCTAGCTAGCAGCTGGCTGCAACAAACATTCTGCATGCACTTTGAATTCTAGAGATAGGAGAGTTAATTAGATAGCTTAGCTACCACAATGCATGCGTGCAACCTGATAGCTTAGCTACGCGTAGTTGCCAATTCAACCGGCCGACATATATATCGGCCTGAGGAAACTAGTGGAGGACTCCAAAGGGATCGCATTGATCTGGCTAGCTATCTCGATCGATCGCCTCATCGATCGACGACGACGTGCATGATCGATCAGTGCAATCCCTTTGGAATTTTCCTCTTGCTTCCGCCTCCTCATCTTCCTTGATCGATCGATCCTTTGCCTGCTGGACGCGCTTGCCTGCCGGCTTGCTTCTTCCATCGCCGCCTTGATCAATCCGCAAGCTGCTCCAGATTCAGGAGTTAAATCGAAGCCCAACGCTAGCACACAGTGATGTCTGCTGAAAGTGCATATTTGGCAGTGCAAGAAGGTCTTTTGACAGACAGGGTAAAACATATAGAGTCCCGAGTCCCGACAAGTTCAGTTTATGACGATGGAATCAATCAAAGGAATATGGTTCGCACGGC-TGAATCGCTGAACCACTCTGAAATCTGAGGGCGTGTTTGCTTGCTGCCCTCAGATTCGCGCCCGGCTCATGCGTCGATCTCAGGCGTCCGATTTCGGTCGCCTGCGGTCGGATCGACCTGCCTGAGCAATGGTCTCCAGGCGAGGGCAGCAACCAAACAGCCCCTGAATACCTGGCTAGCTAAGGTTTCTGATCTATTCTGGCTGATCAGTGTCCATTTTCTTTCGTCCATAAGGCCGAGTGCAGAACAACTTGTATATATATATTTATGTGTTGATCTGGTAATTCAATGTAGTAGCAAAGAGGCAATTGAGGATTCTGCACACACGCATCTACTGTAGCAGAATACTGATGTCTTTTATGTAATCCTGTCAAAGTTACTAGTAAAATTTTCTTTCAGAGAGGAAAAACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCACTGTCATGCCGTTACGTACCGTAT]

[+] EMBL AK060126             [CACTTAGCTTAGTGTTTACCTAGCTAGCTAGCAGCTGGCTGCAACAAACATTCTGCATGCACTTTGAATTCTAGAGATAGGAGAGTTAATTAGATAGCTTAGCTACCACAATGCATGCGTGCAACCTGATAGCTTAGCTACGCGTAGTTGCCAATTCAACCGGCCGACATATATATCGGCCTGAGGAAACTAGTGGAGGACTCCAAAGGGATCGCATTGATCTGGCTAGCTATCTCGATCGATCGCCTCATCGATCGACGACGACGTGCATGATCGATCAGTGCAATCCCTTTGGAATTTTCCTCTTGCTTCCGCCTCCTCATCTTCCTTGATCGATCGATCCTTTGCCTGCTGGACGCGCTTGCCTGCCGGCTTGCTTCTTCCATCGCCGCCTTGATCAATCCGCAAGCTGCTCCAGATTCAGGAGTTAAATCGAAGCCCAACGCTAGCACACAGTGATGTCTGCTGAAAGTGCATATTTGGCAGTGCAAGAAGGTCTTTTGACAGACAGGGTAAAACATATAGAGTCCCGAGTCCCGACAAGTTCAGTTTATGACGATGGAATCAATCAAAGGAATATGGTTCGCACGGC TGAATCGCTGAACCACTCTGAAATCTGAGGGCGTGTTTGCTTGCTGCCCTCAGATTCGCGCCCGGCTCATGCGTCGATCTCAGGCGTCCGATTTCGGTCGCCTGCGGTCGGATCGACCTGCCTGAGCAATGGTCTCCAGGCGAGGGCAGCAACCAAACAGCCCCTGAATACCTGGCTAGCTAAGGTTTCTGATCTATTCTGGCTGATCAGTGTCCATTTTCTTTCGTCCATAAGGCCGAGTGCAGAACAACTTGTATATATATATTTATGTGTTGATCTGGTAATTCAATGTAGTAGCAAAGAGGCAATTGAGGATTCTGCACACACGCATCTACTGTAGCAGAATACTGATGTCTTTTATGTAATCCTGTCAAAGTTACTAGTAAAATTTTCT                                                                                                      ]
[+] EMBL CF280358             [                                                                   ATTC AGAGA AGGAGAGTTAATTAGAAAGCTTAGCTACCACAATGCATGCGTGCAACCTGATAGCTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL C27765               [                                                                                                                                                                                                                                      TATCTCGATCGATCGCCTCATCGATCGACGACGACGTGCGTAATCGATCAGTGCAATCCCTTTGGAATTTTCCTCTTGCTTCCGCCTCCTCATCTTCCTTGATCGATCGATCCTTTGCCTGCTGGACGCGCTTGCCTGCCGGCTTGCTTCTTCCATCGCCGCCTTGATCAATCCGCAAGCTGCTCCAGATTCAGGAGTTAAATCGAAGCCCAACGCTAGCACACAGTGATGTCTGCTGAAAGTGCATATTTGGCAGTGCAAGAAGGTCTTTTGACAGACAGGGTAAAACATATAGAGTCCCGAGTCCCGACAAGTTCAGTTTATGACGATGGGATCAATCAAAGGAATATGGTTCG ACGGCTTGAATCGCTGAACCACTCTGAAATCTAGGGGCGTGTTT CTTTCNGCCCTNA ATTC                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CF280357             [                                                                                                                                                                                                                                                                                                                                                                                                       CCTTGATCAATCCGCAAGCTGCTCCAGATTCAGGAGTTAAATCGAAGCCCAACGCTAGCACACAGTGATGTCTGCTGAAAGTGCATATTTGGCAGTGCAAGAAGGTCTTTTGACAGACAGGGTAAAACATATAGAGTCCCGAGTCCCGACAAGTTCAGTTTATGACGATGGAATCAATCAAAGGAATATGGTTCGCACGGC TGAATCGCTGAACCACTCTGAAATCTGAGGGCGTGTTTGCTTGCTGCCCTCAGATTCGCGCCCGGCTCATGCGTCGATCTCAGGCGTCCGATTTCGGTCGCCTGCGGTCGGATCGACCTGCCTGAGCAATGGTCTCCAGGCGAGGGCAGCAACCAAACAGCCCCTGAATACCTGGCTAGCTAAGGTTTCTGATCTATTCTGGCTGATCAGTGTCCATTTTCTTTCGTCCATAAGGCCGAGTGCAGAACAACTTGTATATATATATTTATGTGTTGATCTGGTAATTCAATGTAGTAGCAAAGAGGCAATTGAGGATTCTGCACACACGCATCTACTGTAGCAGAATACTGATGTCTTTTATGTAATCCTGTCAAAGTTACTAGTAAAATTTTCTTTCAGAGAGGAAAAA                                                                                       ]
[+] EMBL CF332502             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGTAGCAGAATACTGATGTCTTTTATGTAATCCTGTC AAGTTACTAGTAAAATTTTCTTTCAGAGAGGAAAATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCACTGTCATGCCGTTACGTACCGTAT]


>consensus_13945#1 CACTTAGCTTAGTGTTTACCTAGCTAGCTAGCAGCTGGCTGCAACAAACATTCTGCATGC ACTTTGAATTCTAGAGATAGGAGAGTTAATTAGATAGCTTAGCTACCACAATGCATGCGT GCAACCTGATAGCTTAGCTACGCGTAGTTGCCAATTCAACCGGCCGACATATATATCGGC CTGAGGAAACTAGTGGAGGACTCCAAAGGGATCGCATTGATCTGGCTAGCTATCTCGATC GATCGCCTCATCGATCGACGACGACGTGCATGATCGATCAGTGCAATCCCTTTGGAATTT TCCTCTTGCTTCCGCCTCCTCATCTTCCTTGATCGATCGATCCTTTGCCTGCTGGACGCG CTTGCCTGCCGGCTTGCTTCTTCCATCGCCGCCTTGATCAATCCGCAAGCTGCTCCAGAT TCAGGAGTTAAATCGAAGCCCAACGCTAGCACACAGTGATGTCTGCTGAAAGTGCATATT TGGCAGTGCAAGAAGGTCTTTTGACAGACAGGGTAAAACATATAGAGTCCCGAGTCCCGA CAAGTTCAGTTTATGACGATGGAATCAATCAAAGGAATATGGTTCGCACGGCTGAATCGC TGAACCACTCTGAAATCTGAGGGCGTGTTTGCTTGCTGCCCTCAGATTCGCGCCCGGCTC ATGCGTCGATCTCAGGCGTCCGATTTCGGTCGCCTGCGGTCGGATCGACCTGCCTGAGCA ATGGTCTCCAGGCGAGGGCAGCAACCAAACAGCCCCTGAATACCTGGCTAGCTAAGGTTT CTGATCTATTCTGGCTGATCAGTGTCCATTTTCTTTCGTCCATAAGGCCGAGTGCAGAAC AACTTGTATATATATATTTATGTGTTGATCTGGTAATTCAATGTAGTAGCAAAGAGGCAA TTGAGGATTCTGCACACACGCATCTACTGTAGCAGAATACTGATGTCTTTTATGTAATCC TGTCAAAGTTACTAGTAAAATTTTCTTTCAGAGAGGAAAAACTCAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCACTGTCATGCCGTTACG TACCGTAT



consensusID : consensus_13945#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 678
fasta sequence
                              [CTTCCGCCTCCTCATGTTCCTTGATCGGATGACTCCTTTGCCTGCTGCACGCGCTTGCCTGCCGGCTTGCTTCTTCCATGCGCGCCTTGATCAATCCGCAAGCTGGCTCCAGATTCAGGAGTTAAATCGAAGCCCAACGCTAGCACACAGTGCAAGAAGGTCTTTTGACAGACAGGGTAAAACATATAGAGTCCCGAGTCCCGACAAGTTCAGTTTATGACGATGGAATCAATCAAAGGAATATGGTTCGCACGGCTGAATCGCTGAACCGCTCTGAAATCTGAGGGCGTGTTTGCTTGCTGCCCTCGGATTCGCGCCTGGCTCAGGGCGTCGATCTCAGACGTCCGATTCGGTCGCCTGCGGTCGGATCGACCTGCTTGAGCAATGGTCTCCAGGCGAGGGCAGCAACCAAAC-AGCCCCTGAATACCTGGCTAGCTAAGGTTTCTGATCTCTTCTGGCTGATCAGTGTCCATTTTCTTTCGTCCATAAGGCCGAGTGCAGAACAACTTGTATATATATTTATGTGTCGATCTGGTAATTCAATGTAGTAGCAAAGAGGCAATTGAGGATTCTGCACACACGCATCTACTGTAGCAGAATACTGATGTCTTTTATGTAATCCTGTCAAAGTTACTAGTAAAATTTTCTTTCAGAGAGGAAAATCTCAAAAAAAAAAAA]

[-] EMBL CA760915             [CTTCCGCCTCCTCATGTTCCTTGATCGGATGACTCCTTTGCCTGCTGCACGCGCTTGCCTGCCGGCTTGCTTCTTCCATGCGCGCCTTGATCAATCCGCAAGCTGGCTCCAGATTCAGGAGTTAAATCGAAGCCCAACGCTAGCACACAGTGCAAGAAGGTCTTTTGACAGACAGGGTAAAACATATAGAGTCCCGAGTCCCGACAAGTTCAGTTTATGACGATGGAATCAATCAAAGGAATATGGTTCGCACGGCTGAATCGCTGAACCGCTCTGAAATCTGAGGGCGTGTTTGCTTGCTGCCCTCGGATTCGCGCCTGGCTCAGGGCGTCGATCTCAGACGTCCGATTCGGTCGCCTGCGGTCGGATCGACCTGCTTGAGCAATGGTCTCCAGGCGAGGGCAGCAACCAAAC AGCCCCTGAATACCTGGCTAGCTAAGGTTTCTGATCTCTTCTGGCTGATCAGTGTCCATTTTCTTTCGTCCATAAGGCCGAGTGCAGAACAACTTGTATATATATTTATGTGTCGATCTGGTAATTCAATGTAGTAGCAAAGAGGCAATTGAGGATTCTGCACACACGCATCTACTGTAGCAGAATACTGATGTCTTTTATGTAATCCTGTCAAAGTTACTAGTAAAATTTTCTTTCAGAGAGGAAAATCTCAAAAAAAAAAAA]
[-] EMBL OSA309286            [                                                                                                                                                                                                                                                                                                                                                                                 CGACCTGCCTGAGCAATGGTCTCCAGGCGAGAGCAGCAACCAAACAACCCCCTGAATACCTGGCTAGCTAAGGTTTCTGATCTCTTCTGGCTGATCAGTGTCCATTTTCTTT GTCCATAAGGCCGAGTGCAGAACAACTTGTATATATA TTA GTGTTGATCTGGTAATTCAATGTAGTAGCAAAGAGGCAATTGAGGATTCTGCACACACGCATCTACTGTAGCAGAATTCTGATGTCCTTTATGTAATCCTGTCAAAGTTACTAGTAAAATTTTCTTT                            ]


>consensus_13945#2 CTTCCGCCTCCTCATGTTCCTTGATCGGATGACTCCTTTGCCTGCTGCACGCGCTTGCCT GCCGGCTTGCTTCTTCCATGCGCGCCTTGATCAATCCGCAAGCTGGCTCCAGATTCAGGA GTTAAATCGAAGCCCAACGCTAGCACACAGTGCAAGAAGGTCTTTTGACAGACAGGGTAA AACATATAGAGTCCCGAGTCCCGACAAGTTCAGTTTATGACGATGGAATCAATCAAAGGA ATATGGTTCGCACGGCTGAATCGCTGAACCGCTCTGAAATCTGAGGGCGTGTTTGCTTGC TGCCCTCGGATTCGCGCCTGGCTCAGGGCGTCGATCTCAGACGTCCGATTCGGTCGCCTG CGGTCGGATCGACCTGCTTGAGCAATGGTCTCCAGGCGAGGGCAGCAACCAAACAGCCCC TGAATACCTGGCTAGCTAAGGTTTCTGATCTCTTCTGGCTGATCAGTGTCCATTTTCTTT CGTCCATAAGGCCGAGTGCAGAACAACTTGTATATATATTTATGTGTCGATCTGGTAATT CAATGTAGTAGCAAAGAGGCAATTGAGGATTCTGCACACACGCATCTACTGTAGCAGAAT ACTGATGTCTTTTATGTAATCCTGTCAAAGTTACTAGTAAAATTTTCTTTCAGAGAGGAA AATCTCAAAAAAAAAAAA



consensusID : consensus_13945#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 625
fasta sequence
                              [TGCGCCGCCCCGCGCGCTCCTCCCGGCCAGTCCCACCAGCGCGCGCCGCCCGCACGCCCATACGGCTCTCGTCGTCCCTCCGCCCGCCGCTCCATGTCGCCGTCCCCCTCATTGGCGCCGGCCTCTAGCGCGCGCCCGGGCTCACGCCCTATAGAGTGCGCCCCCCCGCGCCCGCGGCGCGCTTGCCCCCGCCCCCGCCCACCGACGCCGCTCCGGTGCCGCCCCGCCCTCCCGCCGACGCCCCTCCCCCAATCCGAGCGCGCGCCGCCCCCCGCCGGCCTCGCACTCGCCCCGTGGCCCAGCGCGTCGATTTCACCGCTCCCATTCGGTCGCCTCCGGTTGGATCGCCCTGCTTGAGCAATGGTCTCCAGGCGAGGGCAGCAACCAAACAGCCCCTGAATACCTGGCTAGCTAAGGTTTCTGATCTCTTCTGGCTGATCAGTGTCCATTTTCTTTGGTCCATAAGGCCGAGTGCAGAACAACTGGTATATATATTTATGTGTTGATCTGGTAATTCAATGTAGTAGCAAAGAGGCAATTGAGGATTCTGCACACACGCATCTACTGTAGCAGAATACTGATGTCTTTTATGTAATCCTGTCAAAGTTACTAGTAAAATTTTCTT]

[-] EMBL CA761572             [TGCGCCGCCCCGCGCGCTCCTCCCGGCCAGTCCCACCAGCGCGCGCCGCCCGCACGCCCATACGGCTCTCGTCGTCCCTCCGCCCGCCGCTCCATGTCGCCGTCCCCCTCATTGGCGCCGGCCTCTAGCGCGCGCCCGGGCTCACGCCCTATAGAGTGCGCCCCCCCGCGCCCGCGGCGCGCTTGCCCCCGCCCCCGCCCACCGACGCCGCTCCGGTGCCGCCCCGCCCTCCCGCCGACGCCCCTCCCCCAATCCGAGCGCGCGCCGCCCCCCGCCGGCCTCGCACTCGCCCCGTGGCCCAGCGCGTCGATTTCACCGCTCCCATTCGGTCGCCTCCGGTTGGATCGCCCTGCTTGAGCAATGGTCTCCAGGCGAGGGCAGCAACCAAACAGCCCCTGAATACCTGGCTAGCTAAGGTTTCTGATCTCTTCTGGCTGATCAGTGTCCATTTTCTTTGGTCCATAAGGCCGAGTGCAGAACAACTGGTATATATATTTATGTGTTGATCTGGTAATTCAATGTAGTAGCAAAGAGGCAATTGAGGATTCTGCACACACGCATCTACTGTAGCAGAATACTGATGTCTTTTATGTAATCCTGTCAAAGTTACTAGTAAAATTTTCTT]


>consensus_13945#3 TGCGCCGCCCCGCGCGCTCCTCCCGGCCAGTCCCACCAGCGCGCGCCGCCCGCACGCCCA TACGGCTCTCGTCGTCCCTCCGCCCGCCGCTCCATGTCGCCGTCCCCCTCATTGGCGCCG GCCTCTAGCGCGCGCCCGGGCTCACGCCCTATAGAGTGCGCCCCCCCGCGCCCGCGGCGC GCTTGCCCCCGCCCCCGCCCACCGACGCCGCTCCGGTGCCGCCCCGCCCTCCCGCCGACG CCCCTCCCCCAATCCGAGCGCGCGCCGCCCCCCGCCGGCCTCGCACTCGCCCCGTGGCCC AGCGCGTCGATTTCACCGCTCCCATTCGGTCGCCTCCGGTTGGATCGCCCTGCTTGAGCA ATGGTCTCCAGGCGAGGGCAGCAACCAAACAGCCCCTGAATACCTGGCTAGCTAAGGTTT CTGATCTCTTCTGGCTGATCAGTGTCCATTTTCTTTGGTCCATAAGGCCGAGTGCAGAAC AACTGGTATATATATTTATGTGTTGATCTGGTAATTCAATGTAGTAGCAAAGAGGCAATT GAGGATTCTGCACACACGCATCTACTGTAGCAGAATACTGATGTCTTTTATGTAATCCTG TCAAAGTTACTAGTAAAATTTTCTT



consensusID : consensus_13945#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 581
fasta sequence
                              [GGNAAANCCGGGGNAAATNNGAAAANAGGNNTTTNNGGGANGAAAAAATNGGCNANCNAGGGGGNTTTNTTAAAAAAAGGGGGAAAAAAANAGGGNTCCCGGATCCCAAAAAAATTAAGTTANGGGGGAGGGGANTCAAATCNAAGGGAAAAGGNTTCNNNNANGGGGGGGATTCGCAGGAGNCCNAAANNGGNATNGGGGGGGGGGGTTNGGTATGCNTNCCCTTNAGNNATCGNCNCCCGGGTTNANGGGTNGAAATNTCNGGGATTCGGATTTCGGTCCCCCTGCCGGTCGGATTNGGACTGCTNGACCAATGGTNTCCAGGNGGGGCAGCAAACCNAACAGCCCNNGAANACCTGGCTAGCTAAGGTTTCTGATCTATTCTGGCTGATCAGTGTCCATTTTCTTTCGTCCATAAGGCCGAGTGCAGAACAACTTGTATATATATATTTATGTGTTGATCTGGTAATTCAATGTAGTAGCAAAGAGGCAATTGAGGATTCTGCACACACGCATCTACTGTAGCAGAATACTGATGTCTTTTATGTAATCCTGTCAAAGTTACTAGTAAAATTTTCTTT]

[-] EMBL BE229136             [GGNAAANCCGGGGNAAATNNGAAAANAGGNNTTTNNGGGANGAAAAAATNGGCNANCNAGGGGGNTTTNTTAAAAAAAGGGGGAAAAAAANAGGGNTCCCGGATCCCAAAAAAATTAAGTTANGGGGGAGGGGANTCAAATCNAAGGGAAAAGGNTTCNNNNANGGGGGGGATTCGCAGGAGNCCNAAANNGGNATNGGGGGGGGGGGTTNGGTATGCNTNCCCTTNAGNNATCGNCNCCCGGGTTNANGGGTNGAAATNTCNGGGATTCGGATTTCGGTCCCCCTGCCGGTCGGATTNGGACTGCTNGACCAATGGTNTCCAGGNGGGGCAGCAAACCNAACAGCCCNNGAANACCTGGCTAGCTAAGGTTTCTGATCTATTCTGGCTGATCAGTGTCCATTTTCTTTCGTCCATAAGGCCGAGTGCAGAACAACTTGTATATATATATTTATGTGTTGATCTGGTAATTCAATGTAGTAGCAAAGAGGCAATTGAGGATTCTGCACACACGCATCTACTGTAGCAGAATACTGATGTCTTTTATGTAATCCTGTCAAAGTTACTAGTAAAATTTTCTTT]


>consensus_13945#4 GGNAAANCCGGGGNAAATNNGAAAANAGGNNTTTNNGGGANGAAAAAATNGGCNANCNAG GGGGNTTTNTTAAAAAAAGGGGGAAAAAAANAGGGNTCCCGGATCCCAAAAAAATTAAGT TANGGGGGAGGGGANTCAAATCNAAGGGAAAAGGNTTCNNNNANGGGGGGGATTCGCAGG AGNCCNAAANNGGNATNGGGGGGGGGGGTTNGGTATGCNTNCCCTTNAGNNATCGNCNCC CGGGTTNANGGGTNGAAATNTCNGGGATTCGGATTTCGGTCCCCCTGCCGGTCGGATTNG GACTGCTNGACCAATGGTNTCCAGGNGGGGCAGCAAACCNAACAGCCCNNGAANACCTGG CTAGCTAAGGTTTCTGATCTATTCTGGCTGATCAGTGTCCATTTTCTTTCGTCCATAAGG CCGAGTGCAGAACAACTTGTATATATATATTTATGTGTTGATCTGGTAATTCAATGTAGT AGCAAAGAGGCAATTGAGGATTCTGCACACACGCATCTACTGTAGCAGAATACTGATGTC TTTTATGTAATCCTGTCAAAGTTACTAGTAAAATTTTCTTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13945#1      ------------------------------------------------------------
consensus_13945#2      ------------------------------------------------------------
consensus_13945#0      CTTAGCTTAGTGTTTACCTAGCTAGCTAGCAGCTGGCTGCAACAAACATTCTGCATGCAC 60
consensus_13945#4      ------------------------------------------------------------
consensus_13945#3      ------------------------------------------------------------
                                                                                   

consensus_13945#1      ------------------------------------------------------------
consensus_13945#2      ------------------------------------------------------------
consensus_13945#0      TTTGAATTCTAGAGATAGGAGAGTTAATTAGATAGCTTAGCTACCACAATGCATGCGTGC 120
consensus_13945#4      ------------------------------------------------------------
consensus_13945#3      ------------------------------------------------------------
                                                                                   

consensus_13945#1      ------------------------------------------------------------
consensus_13945#2      ------------------------------------------------------------
consensus_13945#0      AACCTGATAGCTTAGCTACGCGTAGTTGCCAATTCAACCGGCCGACATATATATCGGCCT 180
consensus_13945#4      ------------------------------------------------------------
consensus_13945#3      ------------------------------------------------------------
                                                                                   

consensus_13945#1      ------------------------------------------------------------
consensus_13945#2      ------------------------------------------------------------
consensus_13945#0      GAGGAAACTAGTGGAGGACTCCAAAGGGATCGCATTGATCTGGCTAGCTATCTCGATCGA 240
consensus_13945#4      ------------------------------------------------------------
consensus_13945#3      ------------------------------------------------------------
                                                                                   

consensus_13945#1      ------------------------------------------------------------
consensus_13945#2      ------------------------------------------------------------
consensus_13945#0      TCGCCTCATCGATCGACGACGACGTGCGTGATCGATCAGTGCAATCCCTTTGGAATTTTC 300
consensus_13945#4      ------------------------------------------------------------
consensus_13945#3      ------------------------------------------------------------
                                                                                   

consensus_13945#1      ------------------------------------------------------------
consensus_13945#2      ------------------------------------------------------------
consensus_13945#0      CTCTTGCTTCCGCCTCCTCATCTTCCTTGATCGATCGATCCTTTGCCTGCTGGACGCGCT 360
consensus_13945#4      ------------------------------------------------------------
consensus_13945#3      ------------------------------------------------------------
                                                                                   

consensus_13945#1      ------------------------------------------------------------
consensus_13945#2      ------------------------------------------------------------
consensus_13945#0      TGCCTGCCGGCTTGCTTCTTCCATCGCCGCCTTGATCAATCCGCAAGCTGCTCCAGATTC 420
consensus_13945#4      ------------------------------------------------------------
consensus_13945#3      ------------------------------------------------------------
                                                                                   

consensus_13945#1      ------------------------------------------------------------
consensus_13945#2      ------------------------------------------------------------
consensus_13945#0      AGGAGTTAAATCGAAGCCCAACGCTAGCACACAGGTGTGTATCGTATACAATTACTGCAT 480
consensus_13945#4      ------------------------------------------------------------
consensus_13945#3      ------------------------------------------------------------
                                                                                   

consensus_13945#1      ------------------------------------------------------------
consensus_13945#2      ------------------------------------------------------------
consensus_13945#0      ATGTATGCATGCTCCACATCAGTATATTGATCATCCCCGTATACAAGAAATGAACAACAG 540
consensus_13945#4      ------------------------------------------------------------
consensus_13945#3      ------------------------------------------------------------
                                                                                   

consensus_13945#1      ------------------------------------------------------------
consensus_13945#2      ------------------------------------------------------------
consensus_13945#0      TAGGAGTAGTATTGAGTATTCTAGTGTTACTTTCTTTTACTTTGAGAACGAATTAATGGC 600
consensus_13945#4      ------------------------------------------------------------
consensus_13945#3      ------------------------------------------------------------
                                                                                   

consensus_13945#1      ------------------------------------------------------------
consensus_13945#2      ------------------------------------------------------------
consensus_13945#0      ATCTAATTTGTGTAAGCAAATTACTACTGGTTTCACTAGTCCTGAATTGTAGATGTAAGC 660
consensus_13945#4      ------------------------------------------------------------
consensus_13945#3      ------------------------------------------------------------
                                                                                   

consensus_13945#1      ------------------------------------------------------------
consensus_13945#2      ------------------------------------------------------------
consensus_13945#0      TACTAGCTGTTAGACTATAAGAAGCCATTAATTAGTCGATAACAACATGCAATTGCATCT 720
consensus_13945#4      ------------------------------------------------------------
consensus_13945#3      ------------------------------------------------------------
                                                                                   

consensus_13945#1      ------------------------------------------------------------
consensus_13945#2      ------------------------------------------------------------
consensus_13945#0      TGTCTTTATTTGACTATATATGTTGTTTTTTTCCAGTATGTATATGTTTAAAGCCCTATC 780
consensus_13945#4      ------------------------------------------------------------
consensus_13945#3      ------------------------------------------------------------
                                                                                   

consensus_13945#1      ------------------------------------------------------------
consensus_13945#2      ------------------------------------------------------------
consensus_13945#0      GATCTAACTCTGAATATGCTAAGATAGAGTACAGAAAACATGATGCATATGCACCAGTAC 840
consensus_13945#4      ------------------------------------------------------------
consensus_13945#3      ------------------------------------------------------------
                                                                                   

consensus_13945#1      ------------------------------------------------------------
consensus_13945#2      ------------------------------------------------------------
consensus_13945#0      TGCTTGCAGGACTGTTCAGACATAATTTAATTTGTTATGCATCTGACCTGATCATCAAGT 900
consensus_13945#4      ------------------------------------------------------------
consensus_13945#3      ------------------------------------------------------------
                                                                                   

consensus_13945#1      ------------------------------------------------------------
consensus_13945#2      ------------------------------------------------------------
consensus_13945#0      GGATTGATTGGTGATATATAAATGGTAACAAAAGTATAGTAGTGGAGAAGAAACGTGGAG 960
consensus_13945#4      ------------------------------------------------------------
consensus_13945#3      ------------------------------------------------------------
                                                                                   

consensus_13945#1      --------------------------------------CACTTAGCTTAGTGTTTACCTA 22
consensus_13945#2      ------------------------------------------------------------
consensus_13945#0      AATTGGGTTTTACATTAAACTTTGCACGGTACAAGACATTAGACATCGATCGGTGCCTAA 1020
consensus_13945#4      ------------------------------------------------------------
consensus_13945#3      ------------------------------------------------------------
                                                                                   

consensus_13945#1      GCTAGCTAGCAGCTGGCTGCAACAAACATTCTGCATGCACTTTGAATTCTAGAGATAGGA 82
consensus_13945#2      ------------------------------------------------------------
consensus_13945#0      GCTAGTTGGAATTTTGCAATGATCTTCCCTTTTTCTGATCTTGCTTTTTGTGTGCATTAA 1080
consensus_13945#4      ------------------------------------------------------------
consensus_13945#3      ------------------------------------------------------------
                                                                                   

consensus_13945#1      GAGTTAATTAGATAGCTTAGCTACCACAAT-GCATGCGTGCAACCTGATAGCTTAGCTAC 141
consensus_13945#2      ------------------------------------------------------------
consensus_13945#0      TTGTTCCGCTTGTTGCTTGAGAGTTGGAGTAGTACGCATCTCGATTGCAACTCATTTTGC 1140
consensus_13945#4      ------------------------------------------------------------
consensus_13945#3      ------------------------------------------------------------
                                                                                   

consensus_13945#1      GCGTAGTTGCCAATTCAACCGGCCGACATATATATCGGCCTGAGGAAACTAGTGGAGGAC 201
consensus_13945#2      ------------------------------------------------------------
consensus_13945#0      GCGTGAATGAGTACCAATTTGGATTCGATCGTCATCGAGAAAGAGACAAGATACATATTT 1200
consensus_13945#4      ------------------------------------------------------------
consensus_13945#3      ------------------------------------------------------------
                                                                                   

consensus_13945#1      TCCAAAGGGATCGCATTGATCTGGCTAGCTATCTCGATCGATCGCCTCATCGATCGACGA 261
consensus_13945#2      ------------------------------------------------------------
consensus_13945#0      TTTGCGAACGCGTAAAAAAATAGCACGTCAATATATTAGAAGAAACTGATACATACTCCG 1260
consensus_13945#4      ------------------------------------------------------------
consensus_13945#3      ------------------------------------------------------------
                                                                                   

consensus_13945#1      CGACGTGCATGATCGATCAGTGCAATCCCTTTGGAATTTTCCTCT-TGCTTCCGCCTCCT 320
consensus_13945#2      ------------------------------------------------CTTCCGCCTCCT 12
consensus_13945#0      TAGCTATCTTAATTTTATCTCTCCATCGCATGCAACTAAACTAATGTACTACTATATTTT 1320
consensus_13945#4      ------------------------------------------------------------
consensus_13945#3      ------------------------------------------------------------
                                                                                   

consensus_13945#1      CATCTTCCTTGATCGATCGA--TCCTTTGCCTGCTGGACGCGCTTGCCTG----CCGGCT 374
consensus_13945#2      CATGTTCCTTGATCGGATGAC-TCCTTTGCCTGCTGCACGCGCTTGCCTG----CCGGCT 67
consensus_13945#0      CTCTTATCAAGAGAAAAGGAACACAAACGATCATTGCACAATATTTCCGGAACCCAAATA 1380
consensus_13945#4      ------------------------------------------------------------
consensus_13945#3      ----------------------------------------------TGCGCCGCCCCGCG 14
                                                                                   

consensus_13945#1      TGCTTCTTCCATCGCCGCCTTGATCAATCCGCAAGCTG-CTCCAGATTCAGGAGTTAAAT 433
consensus_13945#2      TGCTTCTTCCATGCGCGCCTTGATCAATCCGCAAGCTGGCTCCAGATTCAGGAGTTAAAT 127
consensus_13945#0      AGCTAGCTCTGTCAATGCTTATAAACGTACTCCTATATAAAATATATAGTTGATGATATG 1440
consensus_13945#4      -----------------------------------------------------GGNAAAN 7
consensus_13945#3      CGCTCCTCCCGGCCAGTCCCACCAGCGCGCGCCGCCCGCACGCCCATACGGCTCTCGTCG 74
                                                                                   

consensus_13945#1      CGAAGCCCAACGCTAGCACACAGTGATGTCTGCTGAAAGTGCATATTTGGCAGTGCAAGA 493
consensus_13945#2      CGAAGCCCAACGCTAGCACACAGTG------------------------------CAAGA 157
consensus_13945#0      CCATGATGCATTATTGAACACAGTGATGTCTGCTGAAAGTGCATATTTGGCAGTGCAAGA 1500
consensus_13945#4      CCGGGGNAAATNN--GAAAANAGGNNTTTN---NGGGANGAAAAAATNGGCNANCNAGGG 62
consensus_13945#3      TCCCTCCGCCCGCCGCTCCATGTCGCCGTCCCCCTCATTGGCG---CCGGC--CTCTAGC 129
                                          *                                      * 

consensus_13945#1      AGGTCTTTTGACAGACAGGGTAAAACATATAGAGTCCCGAGTCC-CGACAAGTTCAGTTT 552
consensus_13945#2      AGGTCTTTTGACAGACAGGGTAAAACATATAGAGTCCCGAGTCC-CGACAAGTTCAGTTT 216
consensus_13945#0      AGGTCTTTTGACAGACAGGGTAAAACATATAGAGTCCCGAGTCC-CGACAAGTTCAGTTT 1559
consensus_13945#4      GGNTTTNTTAAAAAAAGGGGGAAAAAAANAGGGNTCCCGGATCC-CAAAAAAATTAAGTT 121
consensus_13945#3      GCGCGCCCGGGCTCACGCCCTATAGAGTGCGCCCCCCCGCGCCCGCGGCGCGCTT-GCCC 188
                                     *      * *           ****   ** *       *      

consensus_13945#1      ATGACGATGG--AATCAA--TCAAAGGAATATGGTTCGCAC----GGCTGAATCGCTGAA 604
consensus_13945#2      ATGACGATGG--AATCAA--TCAAAGGAATATGGTTCGCAC----GGCTGAATCGCTGAA 268
consensus_13945#0      ATGACGATGG--AATCAA--TCAAAGGAATATGGTTCGCAC----GGCTGAATCGCTGAA 1611
consensus_13945#4      ANGGGGGAGGGGANTCAAATCNAAGGGAAAAGGNTTCNNNNANGGGGGGGATTCGCAGGA 181
consensus_13945#3      CCGCCCCCGC----CCAC--CGACGCCGCTCCGGTGCCGCCC---CGCCCTCCCGCCGAC 239
                         *     *      **     *         * * *         *      *** *  

consensus_13945#1      CCACT---CTGAAATCTGAGGG------CGTGTTTGCTTGCTGCCCTCAGATTCGCGCCC 655
consensus_13945#2      CCGCT---CTGAAATCTGAGGG------CGTGTTTGCTTGCTGCCCTCGGATTCGCGCCT 319
consensus_13945#0      CCACT---CTGAAATCTGAGGG------CGTGTTTGCTTGCTGCCCTCAGATTCGCGCCC 1662
consensus_13945#4      GNCCNAAANNGGNATNGGGGGGGGGGGTTNGGTATGCNTNCCCTTNAGNNATCGNCNCCC 241
consensus_13945#3      GCCCCTC-CCCCAATCCGAGCGCG----CGCCGCCCCCCGCCGGCCTCGCACTCGCCCCG 294
                          *         **  * * *              *   *         *    * ** 

consensus_13945#1      GG-CTCATG-CGTCGA--TCTCAGGCGTCCG-ATTTCGGTCGCCTG--CGGTCGGAT-CG 707
consensus_13945#2      GG-CTCAGGGCGTCGA--TCTCAGACGTCCG-ATT-CGGTCGCCTG--CGGTCGGAT-CG 371
consensus_13945#0      GG-CTCATG-CGTCGA--TCTCAGGCGTCCG-ATTTCGGTCGCCTG--CGGTCGGAT-CG 1714
consensus_13945#4      GGGTTNANG-GGTNGAAATNTCNGGGATTCGGATTTCGGTCCCCCTGCCGGTCGGATTNG 300
consensus_13945#3      TGGCCCAGCGCGTCGA--TTTCACCGCTCCC-ATT-CGGTCGCCTC--CGGTTGGAT-CG 347
                        *    *    ** **  * **     * *  *** ***** **    **** ****  *

consensus_13945#1      ACCTGCCTGAGCAATGGTCTCCAGGCGAGGGCAGCAA-CCAAACAGCCCCTGAATACCTG 766
consensus_13945#2      ACCTGCTTGAGCAATGGTCTCCAGGCGAGGGCAGCAA-CCAAACAGCCCCTGAATACCTG 430
consensus_13945#0      ACCTGCCTGAGCAATGGTCTCCAGGCGAGGGCAGCAA-CCAAACAGCCCCTGAATACCTG 1773
consensus_13945#4      GACTGCTNGACCAATGGTNTCCAGGNG-GGGCAGCAAACCNAACAGCCCNNGAANACCTG 359
consensus_13945#3      CCCTGCTTGAGCAATGGTCTCCAGGCGAGGGCAGCAA-CCAAACAGCCCCTGAATACCTG 406
                         ****  ** ******* ****** * ********* ** ********  *** *****

consensus_13945#1      GCTAGCTAAGGTTTCTGATCTATTCTGGCTGATCAGTGTCCATTTTCTTTCGTCCATAAG 826
consensus_13945#2      GCTAGCTAAGGTTTCTGATCTCTTCTGGCTGATCAGTGTCCATTTTCTTTCGTCCATAAG 490
consensus_13945#0      GCTAGCTAAGGTTTCTGATCTATTCTGGCTGATCAGTGTCCATTTTCTTTCGTCCATAAG 1833
consensus_13945#4      GCTAGCTAAGGTTTCTGATCTATTCTGGCTGATCAGTGTCCATTTTCTTTCGTCCATAAG 419
consensus_13945#3      GCTAGCTAAGGTTTCTGATCTCTTCTGGCTGATCAGTGTCCATTTTCTTTGGTCCATAAG 466
                       ********************* **************************** *********

consensus_13945#1      GCCGAGTGCAGAACAACTTGTATATATATATTTATGTGTTGATCTGGTAATTCAATGTAG 886
consensus_13945#2      GCCGAGTGCAGAACAACTTGTATATATA--TTTATGTGTCGATCTGGTAATTCAATGTAG 548
consensus_13945#0      GCCGAGTGCAGAACAACTTGTATATATATATTTATGTGTTGATCTGGTAATTCAATGTAG 1893
consensus_13945#4      GCCGAGTGCAGAACAACTTGTATATATATATTTATGTGTTGATCTGGTAATTCAATGTAG 479
consensus_13945#3      GCCGAGTGCAGAACAACTGGTATATATA--TTTATGTGTTGATCTGGTAATTCAATGTAG 524
                       ****************** *********  ********* ********************

consensus_13945#1      TAGCAAAGAGGCAATTGAGGATTCTGCACACACGCATCTACTGTAGCAGAATACTGATGT 946
consensus_13945#2      TAGCAAAGAGGCAATTGAGGATTCTGCACACACGCATCTACTGTAGCAGAATACTGATGT 608
consensus_13945#0      TAGCAAAGAGGCAATTGAGGATTCTGCACACACGCATCTACTGTAGCAGAATACTGATGT 1953
consensus_13945#4      TAGCAAAGAGGCAATTGAGGATTCTGCACACACGCATCTACTGTAGCAGAATACTGATGT 539
consensus_13945#3      TAGCAAAGAGGCAATTGAGGATTCTGCACACACGCATCTACTGTAGCAGAATACTGATGT 584
                       ************************************************************

consensus_13945#1      CTTTTATGTAATCCTGTCAAAGTTACTAGTAAAATTTTCTTTCAGAGAGGAAAAACTCAA 1006
consensus_13945#2      CTTTTATGTAATCCTGTCAAAGTTACTAGTAAAATTTTCTTTCAGAGAGGAAAATCTCAA 668
consensus_13945#0      CTTTTATGTAATCCTGTCAAAGTTACTAGTAAAATTTTCTTTCAGAGAGGAAAAAAAAAA 2013
consensus_13945#4      CTTTTATGTAATCCTGTCAAAGTTACTAGTAAAATTTTCTTT------------------ 581
consensus_13945#3      CTTTTATGTAATCCTGTCAAAGTTACTAGTAAAATTTTCTT------------------- 625
                       *****************************************                   

consensus_13945#1      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCACT 1066
consensus_13945#2      AAAAAAAAAA-------------------------------------------------- 678
consensus_13945#0      NAAAACTCGGCCGAA--------------------------------------------- 2028
consensus_13945#4      ------------------------------------------------------------
consensus_13945#3      ------------------------------------------------------------
                                                                                   

consensus_13945#1      GTCATGCCGTTACGTACCGTAT 1088
consensus_13945#2      ----------------------
consensus_13945#0      ----------------------
consensus_13945#4      ----------------------
consensus_13945#3      ----------------------
                                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)