These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1397#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2360 fasta sequence [TGGCTTACACTGATCGATGCTGTTCTCAGTTCTCACCACCATTTTTACCTCGAAGATTTCTAGATTCGATCAGCAAACCAATTGGAAGCACAATGCAGTTCAGGCTGGTGATCTTGGTTCTGCTCCTCTCCTGCTCGCTTCAGCTGCTTCGCGCGTTTCCATTCCCCATCCCGTTCTTTGGCCCCTTCACGAGCCCACAAGACGTTGATGCGATAAACGAGCTGTACGCGTCGCTGGGCTCGCCTGACCTCCATGGCTGGGCTTCTTCAGGAGGAGACCCCTGCATGGAAGCATGGCAGGGGGTGCAATGCCTTGGACCCAACATCACTGCAATAGAGCTCAGAGGTGCAGGCCTGGGAGGAAAGCTGAGTGAGACGCTGGGGAAGTTCACTGCCATGACAGCATTGGATCTGAGCAGCAACCGCATTGGGGGAGTGATTCCTGAGAGCTTACCACCTGCAGTAAAACAACTGAATTTATCTTCGAATAGTCTCAGTGGCAAACTCCCAGATTCGATGGCGAAGCTG-AACTCGCTTTCGACACTGCATGTTCAGAACAATCAGCTCACTGGCACACTTGATGTTCTA-GGAGATCTTCCCCTGAAAGACTTGGATATAGAGAACAATCTTTTCTCAGGACCAATCCCAGAGAAACTGATCAACATCCCAAAATTTCTGAGAAACGGCAACCATCTTACCATCCCCACGATGCCCGGCTCTTCTCCAACTCCGGATACCATCCCCGGCTCTCCTCCGACTCCGGCGGCAGCGGTGGCGGCGCCTCGATCAGGTGCTTCACACCCTCCTATATATGTAATTCCGGCCACTCCACATGGCGCTGCACAGGGTGACCCTCCGAGACACGGCAAGAAGGTCTCGCCGGCGAAAGCCGCCGGATTCAGCATCCTCGCCGCCGGCTCACTGACCATTGCCGTGGTCCTGATCGTCTTCGCCGTGTCGAAACGGCGGCGGGAGACGTCTCTTCATGGAGGATTTCTGAGAGGAGTTGAGATGAGCACTCCGGATTGGAGTGGGAAGCCTTCAGGACAAAGTGCAGTTGTCAAGGTAGACAAAGAACAAAGCACAGTTGCTGAAGAGAAGGATACCAAGGGTAGCATTTCTTCATATCAGAAGAATGTTCAGGAGAGTTTACAAAACCATCCTTTGCAATTCAAGTTCACAATCTTCACAGTTGCATCCTTGCAACAGTATACCAACAGTTTCAGTGAGCAGAATCTGATGAGGCAAACCCTGTTCGGAAAAATCTACCTAGCAGAGCAGCAAGACATCAAGTTTGCAGTACTGAAGCTTGACGAAGCGATGGCGAGAATGCCGGTGGACGAGTTCTTGAGGATGGTTCAGAGAATCTCTGAACTCCAGCATCCCAACATCGAGGAGCTTGCAGGATGCTGCGTCGAGCACGGACAGAGGCTGCTCGTCTACAAGCATTTCAGCGATGAAACTCTCGACGACATGATCCATCTGAAGAAACTGGCATCATCAGACGATCCTGCTGCCAAGATCACTCTTCCATGGGATGCCCGGGTAGCTGTCGCACTCGAAGCTGCGAAAGCTCTAGAGTACCTCCACGAAGGTGGTCAGAGACAGGTTGTGCACCAGCATTTCAGGCCTGAACATGTGCTCGTCGACGGCGAGATGCGTGTGCGCGTGTCCGGCTGCGGCCTTGCTGCGGCTGTGAAATCCGGCTTGGATCTTCAGTCGGAATGCTGGCTCGACGCGCTGAGCTACGAGCCACCGGAGGCGGCGGCGGCGCCATGGACGGACAAGGGCGACGTGTACAGCTTCGGGGTGGTGATGCTGCAGCTTCTGACGGGGCGGAGGCCTTACGACGGCGCGCGGCCGCGGGGCGAGAGGCGGCTGGTGGCGTGGGCGAGCTCGCGGCTGCACGACCTGACGGCGCTGGAGAAGATGGCCGACCCGCGCCTCGGGACGCCGGCGACGGTCAGGTCCATGTCGCGGTTCGCCGACGTCATCAGCCGGTGCACGCAGCAGGAAGCGGAGTTCCGGCCGGCCATGTCGCAGGTGGTGCAGGATCTGCGGCGCGCGCTGCAGCCTGCACGCGATGCTTGCGGACAGCAGAGCTGCAGCAACTGATTAGTGACGAAAATTTACTAATCCCGCAGTTCCGAAAAAATATATATAACACCATATAAGACATACTCTAATGCCCTATATTTATGCCACTATCTTGTGTTAAATCTATTATATTTTGGAACGAAGGTTGTAGTAATATTTGTCATCCTCCTGATTTGCGTGGGTTCGATTTAAAGTTTTAGACAGCGAAATACCATCAGAAAATAGATGGAAAAGTGGAATACCAACGGAATACAAAGGGAGGAA] [+] EMBL AK111638 [TGGCTTACACTGATCGATGCTGTTCTCAGTTCTCACCACCATTTTTACCTCGAAGATTTCTAGATTCGATCAGCAAACCAATTGGAAGCACAATGCAGTTCAGGCTGGTGATCTTGGTTCTGCTCCTCTCCTGCTCGCTTCAGCTGCTTCGCGCGTTTCCATTCCCCATCCCGTTCTTTGGCCCCTTCACGAGCCCACAAGACGTTGATGCGATAAACGAGCTGTACGCGTCGCTGGGCTCGCCTGACCTCCATGGCTGGGCTTCTTCAGGAGGAGACCCCTGCATGGAAGCATGGCAGGGGGTGCAATGCCTTGGACCCAACATCACTGCAATAGAGCTCAGAGGTGCAGGCCTGGGAGGAAAGCTGAGTGAGACGCTGGGGAAGTTCACTGCCATGACAGCATTGGATCTGAGCAGCAACCGCATTGGGGGAGTGATTCCTGAGAGCTTACCACCTGCAGTAAAACAACTGAATTTATCTTCGAATAGTCTCAGTGGCAAACTCCCAGATTCGATGGCGAAGCTG AACTCGCTTTCGACACTGCATGTTCAGAACAATCAGCTCACTGGCACACTTGATGTTCTA GGAGATCTTCCCCTGAAAGACTTGGATATAGAGAACAATCTTTTCTCAGGACCAATCCCAGAGAAACTGATCAACATCCCAAAATTTCTGAGAAACGGCAACCATCTTACCATCCCCACGATGCCCGGCTCTTCTCCAACTCCGGATACCATCCCCGGCTCTCCTCCGACTCCGGCGGCAGCGGTGGCGGCGCCTCGATCAGGTGCTTCACACCCTCCTATATATGTAATTCCGGCCACTCCACATGGCGCTGCACAGGGTGACCCTCCGAGACACGGCAAGAAGGTCTCGCCGGCGAAAGCCGCCGGATTCAGCATCCTCGCCGCCGGCTCACTGACCATTGCCGTGGTCCTGATCGTCTTCGCCGTGTCGAAACGGCGGCGGGAGACGTCTCTTCATGGAGGATTTCTGAGAGGAGTTGAGATGAGCACTCCGGATTGGAGTGGGAAGCCTTCAGGACAAAGTGCAGTTGTCAAGGTAGACAAAGAACAAAGCACAGTTGCTGAAGAGAAGGATACCAAGGGTAGCATTTCTTCATATCAGAAGAATGTTCAGGAGAGTTTACAAAACCATCCTTTGCAATTCAAGTTCACAATCTTCACAGTTGCATCCTTGCAACAGTATACCAACAGTTTCAGTGAGCAGAATCTGATGAGGCAAACCCTGTTCGGAAAAATCTACCTAGCAGAGCAGCAAGACATCAAGTTTGCAGTACTGAAGCTTGACGAAGCGATGGCGAGAATGCCGGTGGACGAGTTCTTGAGGATGGTTCAGAGAATCTCTGAACTCCAGCATCCCAACATCGAGGAGCTTGCAGGATGCTGCGTCGAGCACGGACAGAGGCTGCTCGTCTACAAGCATTTCAGCGATGAAACTCTCGACGACATGATCCATCTGAAGAAACTGGCATCATCAGACGATCCTGCTGCCAAGATCACTCTTCCATGGGATGCCCGGGTAGCTGTCGCACTCGAAGCTGCGAAAGCTCTAGAGTACCTCCACGAAGGTGGTCAGAGACAGGTTGTGCACCAGCATTTCAGGCCTGAACATGTGCTCGTCGACGGCGAGATGCGTGTGCGCGTGTCCGGCTGCGGCCTTGCTGCGGCTGTGAAATCCGGCTTGGATCTTCAGTCGGAATGCTGGCTCGACGCGCTGAGCTACGAGCCACCGGAGGCGGCGGCGGCGCCATGGACGGACAAGGGCGACGTGTACAGCTTCGGGGTGGTGATGCTGCAGCTTCTGACGGGGCGGAGGCCTTACGACGGCGCGCGGCCGCGGGGCGAGAGGCGGCTGGTGGCGTGGGCGAGCTCGCGGCTGCACGACCTGACGGCGCTGGAGAAGATGGCCGACCCGCGCCTCGGGACGCCGGCGACGGTCAGGTCCATGTCGCGGTTCGCCGACGTCATCAGCCGGTGCACGCAGCAGGAAGCGGAGTTCCGGCCGGCCATGTCGCAGGTGGTGCAGGATCTGCGGCGCGCGCTGCAGCCTGCACGCGATGCTTGCGGACAGCAGAGCTGCAGCAACTGATTAGTGACGAAAATTTACTAATCCCGCAGTTCCGAAAAAATATATATAACACCATATAAGACATACTCTAATGCCCTATATTTATGCCACTATCTTGTGTTAAATCTATTATATTTTGGAACGAAGGTTGTAGTAATATTTGTCATCCTCCTGATTTGCGTGGGTTCGATTTAAAGTTTTAGACAGCGAAATACCATCAGAAAATAGATGGAAAAGTGGAATACCAACGGAATACAAAGGGAGGAA] [+] EMBL OSC795 [ ATGGCTGGGCTTCTTCAGGAGGAGACCCCTGCATGGAAGCATGGCAGGGGGTGCAATGCCTTGGACCCAACATCACTGCAATAGAGCTCAGAGGTGCAGGCCTGGGAGGAAAGCTGAGTGAGACGCTGGGGAAGTTCACTGCCATGACAGCATTGGATCTGAGCAGCAACCGCATTGGGGGAGTGATTCCTGAGAGCTTACCACCTGCAGTAAAACAACTGAATTTATCTTCGAATAGTCTCAGTGGCAAACTCCCAGATTCGATGGCGA NTGAAACTCGCTTTCGACACTGCATGTTCAGAACAATCAGCTCACTGGCACACTTGATGTTCTAGGGAGATCTTCCCCTGAAAGACTTNGATATAGAGAACAATCTTTTCTCAGGACCAAT CCAGAGAAACTGATCAACAT CCAAAATTTCTGAGAAACGGCAAC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||