These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13986#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 2307 fasta sequence [GGAGGAGGAGGAGGAGGAGGAGCGGTGGGATTGGAGGAGAGGAGCGACGCGGCGGAGGACTCGCTGGTGTCGGTGCTCGCCGTGTACGACGGCTTCTGCAACCTCAAGCAGATTAATTTGGAGCTCAAGGTCTGTGGAGGATCATCTATCCGGAAAACTCTGGTGAAAGAAGCGGCTTCCTACGGCGCTGCGCATCTCATCCTTGGTGTTGCGAAGAATTCTCTATCTTTTAGTAGATCCTCCTCCATTTCTGTTGCCAAGTACTGTGCAAAGAGGGTTCCTACTGGATGCTCGGTTCTTGCAGTGAACAACGGCAAGATTCTTTTTCATAAAGATGCAGTACAGCAAGAACCATACCATAGTGCTAGCACAATGACAGAGACACCAAGGAGGAGTTACCGGAAGCTCCTGACTTCTGTGATTGGGGAGAAACTTCGGGATGAGTGTGAACAAGATAACAGGTCCATTTTCCGGGCTGTCACCATGCCACCAAGCTCTCCGGCACCAACGAGAGAAGTTTCATTGGCATTAGTCCCAATGAAGGTTCACCGTCGTGAATCACCAGAAGTGGCAACTGGCTGGTCCTTCCTTAGGAAGAAGTTCCTGCCTGACAGAAAACCTGCCTCGCATGACAGATCGAAGATGTCCGTGGTGCAGTGGGCAATGCGGCTACCTAGTAGGTATTCGTCAGCTTCACCAGTCTGTTCAGAGTACAGAACCACAACACCAGATGGCATCACAAGTGCTAGTCGTATTTTGCGTGACCGGGTGGCTGTCCCTTCGAGAAGCAATTCAGGAAAGTCTTCTGTGGTGATCGAGGAATTGGATAATTCCTCGGATAAAGAAATTCCAGAGGAGTTGATTGCACTCAGAGAAAAATTCCCTTCCGTTTATTCTACCTTCAGTCACAGCGAGCTTGCAAAGATCACTTCTGATTTCTCACCTGAGTGTATAGTTGGACAAGGTGGCACTAGCCAAGTTTACAAAGGTTGCTTAGAAAATGGCAAGGAATTGGCAGTAAAGATCTTGAAGTATTCCGATGAAGTGCTGAAGGAGTTCGTCTCAGAGATTGAGATTGTCAGCTCCCTCAGCCACAAGAACATTATATCGCTTGCCGGTTTCTGCTTCAAGGACACTGACCTTCTGTTGGTGTACGAGTAC-TTGCGAAGAGGCAGTCTGGAAGAGATACTGCATGGTGAGAAAGGATGTGACAACTTATTCGGATGGACCGAGAGGTTCAATGTGGCCCTTGGAGTTGCTCATGCACTAGATTATCTCCATGGTAGTGGCAACAATCGTCCAGTGATCCATAGGGATGTCAAGTCATCAAACATCCTCATCTCACAGGATTTTGAGCCAAAGTTATCAGATTTTGGCCTCGCGCTCTGGGACACTGATGCAACATCGCAGATCACATGCAACGATGTTGCTGGAACTTTCGGATACTTGGCTCCAGAATATTTCATGCATGGCAAGGTGAATGACAAAATTGATGTATACGCTTTTGGTGTCGTCCTTCTTGAACTCATTTCAGGCAAGAAACCGCTTTGCACTGGTTGTCCGAAAGGTCAGGAGAGCCTAGTGATGTGGGCAAACTCCATCATACAGGGAGGAAAACTCACACAACTTGTGGATCCTAACTTGCCTACAGAGGACCATGCCAACAAAGTGGAGAGGATGACCCTTGCTGCTTCCCTCTGCATCAGACCAACACCTCAACGCCGTCCTCACATTGCAGTTGTTCTGAAGCTACTTAACGGCGACAATGGTATTCTGAAGTGGGCTAGATCAGAAGTAGGATTGTCATACGAGAGCGATGGTGATGAACCTGTGGTTACACTGCCAGAGAATAACCGCAACA-TCCAGTCCTACATCAATCTTGCATTCGATGTCGATGACGATTCTGCCTCTGTCAGCAGCAACGATTTCATCGCTGCGAACACTT-CCCTGGAAGAGTATTTACGAGGAAGATGGAGCCGATCGTCGAGCTTTGATTGATCAGTCCATGGTATACTAGTCATTTTTGTATAGTAGGTATAGATCTTTTTTCCCCTTCTTCTTAAGTTAACTTCTTTTGTTCCTTGGATGAGAAGTGGCACATGCAAAATGCCCTCCTCCAAGTCTGTCCTTTAATCTGATGTCTTAGATCTTGTTCTCCCATAAGTTATGGGTCTGTTCTATCATCTCAGAAGGATGTAATTTCCTTGTTATAAACCAAAATTCTCTCATCCAAAGGATGAGAAAGTGGGAAATAAACTAGGAAGATTGTTATTGCAAAAAAAAAAAAAAAAACACTGTCATGCCGTT] [+] EMBL AK072656 [GGAGGAGGAGGAGGAGGAGGAGCGGTGGGATTGGAGGAGAGGAGCGACGCGGCGGAGGACTCGCTGGTGTCGGTGCTCGCCGTGTACGACGGCTTCTGCAACCTCAAGCAGATTAATTTGGAGCTCAAGGTCTGTGGAGGATCATCTATCCGGAAAACTCTGGTGAAAGAAGCGGCTTCCTACGGCGCTGCGCATCTCATCCTTGGTGTTGCGAAGAATTCTCTATCTTTTAGTAGATCCTCCTCCATTTCTGTTGCCAAGTACTGTGCAAAGAGGGTTCCTACTGGATGCTCGGTTCTTGCAGTGAACAACGGCAAGATTCTTTTTCATAAAGATGCAGTACAGCAAGAACCATACCATAGTGCTAGCACAATGACAGAGACACCAAGGAGGAGTTACCGGAAGCTCCTGACTTCTGTGATTGGGGAGAAACTTCGGGATGAGTGTGAACAAGATAACAGGTCCATTTTCCGGGCTGTCACCATGCCACCAAGCTCTCCGGCACCAACGAGAGAAGTTTCATTGGCATTAGTCCCAATGAAGGTTCACCGTCGTGAATCACCAGAAGTGGCAACTGGCTGGTCCTTCCTTAGGAAGAAGTTCCTGCCTGACAGAAAACCTGCCTCGCATGACAGATCGAAGATGTCCGTGGTGCAGTGGGCAATGCGGCTACCTAGTAGGTATTCGTCAGCTTCACCAGTCTGTTCAGAGTACAGAACCACAACACCAGATGGCATCACAAGTGCTAGTCGTATTTTGCGTGACCGGGTGGCTGTCCCTTCGAGAAGCAATTCAGGAAAGTCTTCTGTGGTGATCGAGGAATTGGATAATTCCTCGGATAAAGAAATTCCAGAGGAGTTGATTGCACTCAGAGAAAAATTCCCTTCCGTTTATTCTACCTTCAGTCACAGCGAGCTTGCAAAGATCACTTCTGATTTCTCACCTGAGTGTATAGTTGGACAAGGTGGCACTAGCCAAGTTTACAAAGGTTGCTTAGAAAATGGCAAGGAATTGGCAGTAAAGATCTTGAAGTATTCCGATGAAGTGCTGAAGGAGTTCGTCTCAGAGATTGAGATTGTCAGCTCCCTCAGCCACAAGAACATTATATCGCTTGCCGGTTTCTGCTTCAAGGACACTGACCTTCTGTTGGTGTACGAGTAC TTGCGAAGAGGCAGTCTGGAAGAGATACTGCATGGTGAGAAAGGATGTGACAACTTATTCGGATGGACCGAGAGGTTCAATGTGGCCCTTGGAGTTGCTCATGCACTAGATTATCTCCATGGTAGTGGCAACAATCGTCCAGTGATCCATAGGGATGTCAAGTCATCAAACATCCTCATCTCACAGGATTTTGAGCCAAAGTTATCAGATTTTGGCCTCGCGCTCTGGGACACTGATGCAACATCGCAGATCACATGCAACGATGTTGCTGGAACTTTCGGATACTTGGCTCCAGAATATTTCATGCATGGCAAGGTGAATGACAAAATTGATGTATACGCTTTTGGTGTCGTCCTTCTTGAACTCATTTCAGGCAAGAAACCGCTTTGCACTGGTTGTCCGAAAGGTCAGGAGAGCCTAGTGATGTGGGCAAACTCCATCATACAGGGAGGAAAACTCACACAACTTGTGGATCCTAACTTGCCTACAGAGGACCATGCCAACAAAGTGGAGAGGATGACCCTTGCTGCTTCCCTCTGCATCAGACCAACACCTCAACGCCGTCCTCACATTGCAGTTGTTCTGAAGCTACTTAACGGCGACAATGGTATTCTGAAGTGGGCTAGATCAGAAGTAGGATTGTCATACGAGAGCGATGGTGATGAACCTGTGGTTACACTGCCAGAGAATAACCGCAACA TCCAGTCCTACATCAATCTTGCATTCGATGTCGATGACGATTCTGCCTCTGTCAGCAGCAACGATTTCATCGCTGCGAACACTT CCCTGGAAGAGTATTTACGAGGAAGATGGAGCCGATCGTCGAGCTTTGATTGATCAGTCCATGGTATACTAGTCATTTTTGTATAGTAGGTATAGATCTTTTTTCCCCTTCTTCTTAAGTTAACTTCTTTTGTTCCTTGGATGAGAAGTGGCACATGCAAAATGCCCTCCTCCAAGTCTGTCCTTTAATCTGATGTCTTAGATCTTGTTCTCCCATAAGTTATGGGTCTGTTCTATCATCTCAGAAGGATGTAATTTCCTTGTTATAAACCAAAATTCTCTCATCCAAAGGATGAGAAAGTGGGAAATAAACTAGGAAGA ] [+] EMBL CF303836 [ ggGGAGGATCATCTATCCGGAAAACTCTGGTGAAAGAAGCGGCTTCCTACGGCGCTGCGCATCTCATCCTTGGTGTTGCGAAGAATTCTCTATCTTTTAGTAGATCCTCCTCCATTTCTGTTGCCAAGTACTGTGCAAAGAGGGTTCCTACTGGATGCTCGGTTCTTGCAGTGAACAACGGCTAGATTCTTTTTCATAAAGATGCAGTACAGCAAGAACCATACCATAGTGCTAGCACAATGACAGAGACACCAAGGAGGAGTTACCGGAAGCTCCTGACTTCTGTGATTGGGGAGAAACTTCGGGATGAGTGTGAACAAGATAACAGGTCCATTTTCCGGGCTGTCACCATGCCACCAAGCTCTCCGGCACCAACGAGAGAAGTTTCATTGGCATTAGTCCCAATGAAGGTTCACCGTCGTGAAT ACCAGAAGTGGCAACTGGCTGGTCCTTCCTTAGNAAGAAGTTCCTGCCTGACAGAAAACCTGCCTCGCATGACAGATCGAAGATGTCCGTGGTGCAGTGGGCAATGCGGCTACCTAGTAGGTATTCGTCAGCTTCACCAGTCTGTTCAGAGTACAGAACC CAACACCAGATGGCATCACAAGTGCTAGTCGT ] [+] EMBL CF304875 [ GAGGATCATCTATCCGGAAAACTCTGGTGAAAGAAGCGGCTTCCTACGGCGCTGCGCATCTCATCCTTGGTGTTGCGAAGAATTCTCTATCTTTTAGTAGATCCTCCTCCATTTCTGTTGCCAAGTACTGTGCAAAGAGGGTTCCTACTGGATGCTCGGTTCTTGCAGTGAACAACGGCAAGATTCTTTTTCATAAAGATGCAGTACAGCAAGAACCATACCATAGTGCTAGCACAATGACAGAGACACCAAGGAGGAGTTACCGGAAGCTCCTGACTTCTGTGATTGGGGAGAAACTTCGGGATGAGTGTGAACAAGATAACAGGTCCATTTTCCGGGCTGTCACCATGCCACCAAGCTCTCCGGCACCAACGAGAGAAGTTTCATTGGCATTAGTCCCAATGAAGGTTCACCGTCGTGAATCACCAGAAGTGGCAACTGGCTGGTCCTTCCTTAGGAAGAAGTTCCTGCCTGACAGAAAACCTGCCTCGCATGACAGATCGAAGATGTC ] [+] EMBL CB672649 [ TGACTTCTGTGATTGGGGAGAAACTTCGGGATGAGTGTGAACAAGATAACAGGTCCATTTTCCGGGCTGTCACCATGCCACCAAGCTCTCCGGCACCAACGAGAGAAGTTTCATTGGCATTAGTCCCAATGAAGGTTCACCGTCGTGAATCACCAGAAGTGGCAACTGGCTGGTCCTTCCTTAGGAAGAAGTTCCTGCCTGACAGAAAACCTGCCTCGCATGACAGATCGAAGATGTCCGTGGTGCAGTGGGCAATGCGGCTACCTAGTAGGTATTCGTCAGCTTCACCAGTCTGTTCAGAGTACAGAACCACAACACCAGATGGCATCACAAGTGCTAGTCGTATTTTGCGTGACCGGGTGGCTGTCCCTTCGAGAAGCAATTCAGGAAAGTCTTCTGTGGTGATCGAGGAATTGGATAATTCCTCGGATAAAGAAATTCCAGAGGAGTTGATTGCACTCAGAGAAAAATTCCCTTCCGTTTATTCTACCTTCAGTCACAGCGAGCTTGCAAAGATCACTTCTGATTTCTCACCTGAGTGTATAGTTGGACAAGGTGGCACTAGCCAAGTTTACAAAGGTTGCTTAGAAAATGGCAAGGAATTGGCAGTAAAGATCTTGAAGTATTCCGATGAAGTGCTGAAGGAGTTCGTCTCAGAGATTGAGATTGTCAGCTCCCTCAGCCACAAGAACATTATATCGCTTGCCGGTTTCTGCTTC AGGACACTGACCTTCTGTTGGTGTACGAGTACTTTGCG AGAAGCAGTCTGGGAGAG ] [+] EMBL CF304763 [ CGGCACCAACGAGAGAAGTTTCATTGGCATTAGTCCCAATGAAGGTTCACCGTCGTGAATCACCAGAAGTGGCAACTGGCTGGTCCTTCCTTAGGAAGAAGTTCCTGCCTGACAGAAAACCTGCCTCGCATGACAGATCGAAGATGTCCGTGGTGCAGTGGGCAATGCGGCTACCTAGTAGGTATTCGTCAGCTTCACCAGTCTGTTCAGAGTACAGAACCACAACACCAGATGGCATCACAAGTGCTAGTCGTATTTTGCGTGACCGGGTGGCTGTCCCTTCGAGAAGCAATTCAGGAAAGTCTTCTGTGGTGATCGAGGAATTGGATAATTCCTCGGATA ] [+] EMBL CF304826 [ CGGCACCAACGAGAGAAGTTTCATTGGCATTAGTCCCAATGAAGGTTCACCGTCGTGAATCACCAGAAGTGGCAACTGGCTGGTCCTTCCTTAGG ] [+] EMBL CF319772 [ CTGACCTTCTGTTGGTGTACGAGTAC TTGCGAAGAGGCAGTCTGGAAGAGATACTGCATGGTGAGAAAGGATGTGACAACTTATTCGGATGGACCGAGAGGTTCAATGTGGCCCTTGGAGTTGCTCATGCACTAGATTATCTCCATGGTAGTGGCAACAATCGTCCAGTGATCC TAGGGATGTCAAGTCATCAAACATCCTCATCTCACAGGATTTTGAGCCAAAGTTATCAGATTTTGGCCTCGCGCTCTGGGACACTGATGCAACATCGCAGATCACATGCAACGATGTTGCTGGAACTTTCGGATACTTGGCTCCAGAATATTTCATGCATGGCAAGGTGAATGACAAAATTGATGTATACGCTTTTGGTGTCGTCCTTCTTGAACTCATTTCAGGCAAG ] [+] EMBL CA753618 [ GATGGACCGAGAGGTTCAATGTGGCCCTTGGAGTTGCTCATGCACTAGATTATCTCCATGGTAGTGGCAACAATCGTCCAGTGATCCATAGGGATGTCAAGTCATCAAACATCCTCATCTCACAGGATTTTGAGCCAAAGTTATCAGATTTTGGCCTCGCGCTCTGGGACACTGATGCAACATCGCAGATCACATGCAACGATGTTGCTGGAACTTTCGGATACTTGGCTCCAGAATATTTCATGCATGGCAAGGTGAATGACAAAATTGATGTATACGCTTTTGGTGTCGTCCTTCTTGAACTCATTTCAGGCAAGAAACCGCTTTGCACTGGTTGTCCGAAAGGTCAGGAGAGCCTAGTGATGTGGGCAAACTCCATCATACAGGGAGGGAAACTCACACAACTTGTGGATCCTAACTTGCCTACAGAGGACCATGCCAACAAAGTGGAGAGGATGACCCTTGCTGCTTCCCTCTGCATCAGACCAACACCTCAACGCCGTCCTCACATTGCAGTTGTTCTGAAGCTATCTAACGGCGACCATGGTATTCTGAGGTGGGCTAGATCAGAAGTAGGATTGTCAT CGAGAGCGATGGTGATG ] [-] EMBL CB672650 [ AGAAACCGCTTTGCACTGGTTGTCCGAAAGGTCAGGAGAGCCTAGTGATGTGGGCAAACTCCATCATACAGGGAGGAAAACTCACACAACTTGTGGATCCTAACTTGCCTACAGAGGACCATGCCAACAAAGTGGAGAGGATGACCCTTGCTGCTTCCCTCTGCATCAGACCAACACCTCAACGCCGTCCTCACATTGCAGTTGTTCTGAAGCTACTTAACGGCGACAATGGTATTCTGAAGTGGGCTAGATCAGAAGTAGGATTGTCATACGAGAGCGATGGTGATGAACCTGTGGTTACACTGCCAGAGAATAACCGCAACA TCCAGTCCTACATCAATCTTGCATTCGATGTCGATGACGATTCTGCCTCTGTCAGCAGCAACGATTTCATCGCTGCGAACACTT CCCTGGAAGAGTATTTACGAGGAAGATGGAGCCGATCGTCGAGCTTTGATTGATCAGTCCATGGTATACTAGTCATTTTTGTATAGTAGGTATAGATCTTTTTTCCCCTTCTTCTTAAGTTAACTTCTTTTGTTCCTTGGATGAGAAGTGGCACATGCAAAATGCCCTCCTCCAAGTCTGTCCTTTAATCTGATGTCTTAGATCTTGTTCTCCCATAAGTTATGGGTCTGTTCTATCATCTCAGAAGGATGTAATTTCCTTGTTATAAACCAAAATTCTCTCATCCAAAGGATGAGAAAGAAGGGAATAAACTAGGAAGATTGT ] [+] EMBL CB096296 [ TGACCCTTGCTGCTTCCCTCTGCATCAGACCAACACCTCAACGCCGTCCTCACATTGCAGTTGTTCTGAAGCTACTTAACGGCGACAATGGCATTCTGAAGTGGGCTAGATCAGAAGTAGGATTGTCATACGAGAGCGATGGTGATGAACCTGTGGTTACACTGCCAGAGAATAACCGCAACA TCCAGTCCTACATCAATCTTGCATTCGATGTCGATGACGATTCTGCCTCTGTCAGCAGCAACGATTTCATCGCTGCGAACACTT CCCTGGAAGAGTATTTACGAGGAAGATGGAGCCGATCGTCGAGCTTTGATTGATCAGTCCATGGTATACTAGTCATTTTTGTATAGTAGGTATAGATCTTTTTTCCCCTTCTTCTTAAGTTAACTTCTTTTGTTCCTTGGATGAGAAGTGGCACATGCAAAATGCCCTCCTCCAAGTCTGTCCTTTAATCTGATGTCTTAGATCTTGTTCTCCCATAAGTTATGGGTCTGTTCTATCATCTCAGAAGGATGTAATTTCCTTGTTATAA ] [-] EMBL CB638025 [ TTGTTCTGAAGCTACTTAACGGCGACAATGGTATTTTGAAGTGGGCTAGATCAGAAGTAGGATTGTCATACGAGAGCGATGGTGATGAACCTGTGGTTACACTGCCAGAGAATAACCGCAACA TCCAGTCCTACATCAATCTTGCATTCGATGTCGATGACGATTCTGCCTCTGTCAGCAGCAACGATTTCATCGCTGCGAACACTT CCCTGGAAGAGTATTTACGAGGAAGATGGAGCCGATCGTCGAGCTTTGATTGATCAGTCCATGGTATACTAGTCATTTTTGTATAGTAGGTATAGATCTTTTTTCCCCTTCTTCTTAAGTTAACTTCTTTTGTTCCTTGGATGAGAAGTGGCACATGCAAAATGCCCTCCTCCAAGTCTGTCCTTTAATCTGATGTCTTAGATCTTGTTCTCCCATAAGTTATGGGTCTGTTCTATCATCTCAGAAGGATGTAATTTCCTTGTTATAAACC AAATTCTCTCATCCAAAGGATGAGAAAGTGGGAAATAAACTAAAAAGATT ] [-] EMBL CF319773 [ TACGAGAGCGATGGTGATGAACCTGTGGTTACACTGCCAGAGAATAACCGCAANACTTCAGTCCTACATCAATCTTGCATTCGATGTCGATGACGATTCTGCCTCTGTCAGCAGCAACGATTTCATCGCTGCGAACACTT CCCCTGAAGAGTATTTACGAGGAAGATGGAGCCGATCGTCGAGCTTTGATTGATCAGTCCATGGTATACTAGTCATTTTTGTATAGTAGGTATAGATCTTTTTTCCCCTTCTTCTTAAGTTAACTTCTTTTGTTCCTTGGATGAGAAGTGGCACATGCAAAATGCCCTCCTCCAAGTCTGTCCTTTAATCTGATGTCTTAGATCTTGTTCTCCCATAAGTTATGGGTCTGTTCTATCATCTCAGAAGGATGTAATTTCCTTGTTATAAACCAAAATTCTCTCATCCAAAGGATGAGAAAGTGGGAAATAAACTAGGAAGATTGTTATTGCAAAAAAAAAAAAAAAAACACTGTCATGCCGTT] [+] EMBL BI813035 [ AGCAGCAACGATTTCATCGCTGCGAACACTTCCCCTGGAAGAGTATTTACGAGGAAGATGGA CCGATCGTCGAGCTTTGATTGATCCGTCCCTGGTATACTAGTCATTTTTGTATAGTAGGTATAGATCTTTTTTCCCCTTCTTCTTAAGTTAACTTCTTTTGTTCCTTGGATGAGAAGTGGCACATGCCAAATGCCCTCCTCCAAGTCTGTCCTTTAATCTGATGTCTTAGATCTTGTTCTCCCATAAGTTATGGGTCTGTTCTATCATCTCAGAAGGATGTAATTTCCTTGTTATAAACCCAAATTCTTTCATCCCAAGGATTAGAAAGTGGGAAATAAACTAGGAAGATTGTTATTGCCAAAAAAAAAA ] consensusID : consensus_13986#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 520 fasta sequence [TCACAGCGAGCTTGCAAAGATCACTTCTGATTTCTCACCTGAGTGTATAGTTGGACAAGGTGGCACTAGCCAAGTTTACAAAGGTTGCTTAGAAAATGGCAAGGAATTGGCAGTAAAGATCTTGAAGTATTCCGATGAAGTGCTGAAGGAGTTCGTCTCAGAGATTGAGATTGTCAGCTCCCTCAGCCACAAGAACATTATATCGCTTGCCGGTTTCTGCTTCAAGGACACTGACCTTCTGTTGGTGTACGAGTACTTGCGAAGAGGCAGTCTGGAAGAGATACTGCATGGTATGTTATGTAACTTCTACCACCTGTTAGTTTTTCTCCCTTTAACATTGCCATTTATCAAGAAAACCATCTTATTCTGATGTCACACAGGTGAGAAAGGATGTGACAACTTATTCGGATGGACCGAGNNNTTCAATGTGGCCCTTGGAGTTGCTCATGCACTNNNTTATCTCCATGNTNNTGGCAACAATCGTCCAGTGATCCATNNNGATGTCAAGTCNNNNNNCATC] [+] EMBL CF196228 [TCACAGCGAGCTTGCAAAGATCACTTCTGATTTCTCACCTGAGTGTATAGTTGGACAAGGTGGCACTAGCCAAGTTTACAAAGGTTGCTTAGAAAATGGCAAGGAATTGGCAGTAAAGATCTTGAAGTATTCCGATGAAGTGCTGAAGGAGTTCGTCTCAGAGATTGAGATTGTCAGCTCCCTCAGCCACAAGAACATTATATCGCTTGCCGGTTTCTGCTTCAAGGACACTGACCTTCTGTTGGTGTACGAGTACTTGCGAAGAGGCAGTCTGGAAGAGATACTGCATGGTATGTTATGTAACTTCTACCACCTGTTAGTTTTTCTCCCTTTAACATTGCCATTTATCAAGAAAACCATCTTATTCTGATGTCACACAGGTGAGAAAGGATGTGACAACTTATTCGGATGGACCGAGNNNTTCAATGTGGCCCTTGGAGTTGCTCATGCACTNNNTTATCTCCATGNTNNTGGCAACAATCGTCCAGTGATCCATNNNGATGTCAAGTCNNNNNNCATC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13986#0 GGAGGAGGAGGAGGAGGAGGAGCGGTGGGATTGGAGGAGAGGAGCGACGCGGCGGAGGAC 60 consensus_13986#1 ------------------------------------------------------------ consensus_13986#0 TCGCTGGTGTCGGTGCTCGCCGTGTACGACGGCTTCTGCAACCTCAAGCAGATTAATTTG 120 consensus_13986#1 ------------------------------------------------------------ consensus_13986#0 GAGCTCAAGGTCTGTGGAGGATCATCTATCCGGAAAACTCTGGTGAAAGAAGCGGCTTCC 180 consensus_13986#1 ------------------------------------------------------------ consensus_13986#0 TACGGCGCTGCGCATCTCATCCTTGGTGTTGCGAAGAATTCTCTATCTTTTAGTAGATCC 240 consensus_13986#1 ------------------------------------------------------------ consensus_13986#0 TCCTCCATTTCTGTTGCCAAGTACTGTGCAAAGAGGGTTCCTACTGGATGCTCGGTTCTT 300 consensus_13986#1 ------------------------------------------------------------ consensus_13986#0 GCAGTGAACAACGGCAAGATTCTTTTTCATAAAGATGCAGTACAGCAAGAACCATACCAT 360 consensus_13986#1 ------------------------------------------------------------ consensus_13986#0 AGTGCTAGCACAATGACAGAGACACCAAGGAGGAGTTACCGGAAGCTCCTGACTTCTGTG 420 consensus_13986#1 ------------------------------------------------------------ consensus_13986#0 ATTGGGGAGAAACTTCGGGATGAGTGTGAACAAGATAACAGGTCCATTTTCCGGGCTGTC 480 consensus_13986#1 ------------------------------------------------------------ consensus_13986#0 ACCATGCCACCAAGCTCTCCGGCACCAACGAGAGAAGTTTCATTGGCATTAGTCCCAATG 540 consensus_13986#1 ------------------------------------------------------------ consensus_13986#0 AAGGTTCACCGTCGTGAATCACCAGAAGTGGCAACTGGCTGGTCCTTCCTTAGGAAGAAG 600 consensus_13986#1 ------------------------------------------------------------ consensus_13986#0 TTCCTGCCTGACAGAAAACCTGCCTCGCATGACAGATCGAAGATGTCCGTGGTGCAGTGG 660 consensus_13986#1 ------------------------------------------------------------ consensus_13986#0 GCAATGCGGCTACCTAGTAGGTATTCGTCAGCTTCACCAGTCTGTTCAGAGTACAGAACC 720 consensus_13986#1 ------------------------------------------------------------ consensus_13986#0 ACAACACCAGATGGCATCACAAGTGCTAGTCGTATTTTGCGTGACCGGGTGGCTGTCCCT 780 consensus_13986#1 ------------------------------------------------------------ consensus_13986#0 TCGAGAAGCAATTCAGGAAAGTCTTCTGTGGTGATCGAGGAATTGGATAATTCCTCGGAT 840 consensus_13986#1 ------------------------------------------------------------ consensus_13986#0 AAAGAAATTCCAGAGGAGTTGATTGCACTCAGAGAAAAATTCCCTTCCGTTTATTCTACC 900 consensus_13986#1 ------------------------------------------------------------ consensus_13986#0 TTCAGTCACAGCGAGCTTGCAAAGATCACTTCTGATTTCTCACCTGAGTGTATAGTTGGA 960 consensus_13986#1 -----TCACAGCGAGCTTGCAAAGATCACTTCTGATTTCTCACCTGAGTGTATAGTTGGA 55 ******************************************************* consensus_13986#0 CAAGGTGGCACTAGCCAAGTTTACAAAGGTTGCTTAGAAAATGGCAAGGAATTGGCAGTA 1020 consensus_13986#1 CAAGGTGGCACTAGCCAAGTTTACAAAGGTTGCTTAGAAAATGGCAAGGAATTGGCAGTA 115 ************************************************************ consensus_13986#0 AAGATCTTGAAGTATTCCGATGAAGTGCTGAAGGAGTTCGTCTCAGAGATTGAGATTGTC 1080 consensus_13986#1 AAGATCTTGAAGTATTCCGATGAAGTGCTGAAGGAGTTCGTCTCAGAGATTGAGATTGTC 175 ************************************************************ consensus_13986#0 AGCTCCCTCAGCCACAAGAACATTATATCGCTTGCCGGTTTCTGCTTCAAGGACACTGAC 1140 consensus_13986#1 AGCTCCCTCAGCCACAAGAACATTATATCGCTTGCCGGTTTCTGCTTCAAGGACACTGAC 235 ************************************************************ consensus_13986#0 CTTCTGTTGGTGTACGAGTACTTGCGAAGAGGCAGTCTGGAAGAGATACTGCATGGTGAG 1200 consensus_13986#1 CTTCTGTTGGTGTACGAGTACTTGCGAAGAGGCAGTCTGGAAGAGATACTGCATGGT--- 292 ********************************************************* consensus_13986#0 AAAGGATGTGACAACTTATTCGGATGGACCGAGAGGTTCAATGTGGCCCTTGGAGTTGCT 1260 consensus_13986#1 --ATGTTATG-TAACTTCT----ACCACCTGTTAGTTTTTCTC---CCTTTAACATTGC- 341 * * * ** ***** * * * * ** ** * ** ** **** consensus_13986#0 CATGCACTAGATTATCTCCATGGTAGTGGCAACAATCGTCCAGTGATCCATAGGGATGTC 1320 consensus_13986#1 CATTTATCAAGAAAACCATCTTATTCTGATGTCA------CACAGGTGAGAAAGGATGTG 395 *** * * * * * * ** ** ** * * * ****** consensus_13986#0 AAGTCATCAAACATCCTCATCTCACAGGATTTTGAGCCAAAGTTATCAGATTTTGGCCTC 1380 consensus_13986#1 ACAACTT-----ATTCGGATGGACCGAGNNNTTCAAT-GTGGCCCTTGGAGTT-GCTCAT 448 * * * ** * ** * * ** * * * ** ** * * consensus_13986#0 GCGCTCTGGGACACTGATGCAACATCGCAGATCACATGCAACGATGTTGCTGGAACTTTC 1440 consensus_13986#1 GCACTNNNTTATCTCCATGNTNN-TGGCAACAATCGTCCAGTGAT-CCATNNNGATGTCA 506 ** ** * *** * *** * * ** *** * * consensus_13986#0 GGATACTTGGCTCCAGAATATTTCATGCATGGCAAGGTGAATGACAAAATTGATGTATAC 1500 consensus_13986#1 AGTCNNNNNNCATC---------------------------------------------- 520 * * * consensus_13986#0 GCTTTTGGTGTCGTCCTTCTTGAACTCATTTCAGGCAAGAAACCGCTTTGCACTGGTTGT 1560 consensus_13986#1 ------------------------------------------------------------ consensus_13986#0 CCGAAAGGTCAGGAGAGCCTAGTGATGTGGGCAAACTCCATCATACAGGGAGGAAAACTC 1620 consensus_13986#1 ------------------------------------------------------------ consensus_13986#0 ACACAACTTGTGGATCCTAACTTGCCTACAGAGGACCATGCCAACAAAGTGGAGAGGATG 1680 consensus_13986#1 ------------------------------------------------------------ consensus_13986#0 ACCCTTGCTGCTTCCCTCTGCATCAGACCAACACCTCAACGCCGTCCTCACATTGCAGTT 1740 consensus_13986#1 ------------------------------------------------------------ consensus_13986#0 GTTCTGAAGCTACTTAACGGCGACAATGGTATTCTGAAGTGGGCTAGATCAGAAGTAGGA 1800 consensus_13986#1 ------------------------------------------------------------ consensus_13986#0 TTGTCATACGAGAGCGATGGTGATGAACCTGTGGTTACACTGCCAGAGAATAACCGCAAC 1860 consensus_13986#1 ------------------------------------------------------------ consensus_13986#0 ATCCAGTCCTACATCAATCTTGCATTCGATGTCGATGACGATTCTGCCTCTGTCAGCAGC 1920 consensus_13986#1 ------------------------------------------------------------ consensus_13986#0 AACGATTTCATCGCTGCGAACACTTCCCTGGAAGAGTATTTACGAGGAAGATGGAGCCGA 1980 consensus_13986#1 ------------------------------------------------------------ consensus_13986#0 TCGTCGAGCTTTGATTGATCAGTCCATGGTATACTAGTCATTTTTGTATAGTAGGTATAG 2040 consensus_13986#1 ------------------------------------------------------------ consensus_13986#0 ATCTTTTTTCCCCTTCTTCTTAAGTTAACTTCTTTTGTTCCTTGGATGAGAAGTGGCACA 2100 consensus_13986#1 ------------------------------------------------------------ consensus_13986#0 TGCAAAATGCCCTCCTCCAAGTCTGTCCTTTAATCTGATGTCTTAGATCTTGTTCTCCCA 2160 consensus_13986#1 ------------------------------------------------------------ consensus_13986#0 TAAGTTATGGGTCTGTTCTATCATCTCAGAAGGATGTAATTTCCTTGTTATAAACCAAAA 2220 consensus_13986#1 ------------------------------------------------------------ consensus_13986#0 TTCTCTCATCCAAAGGATGAGAAAGTGGGAAATAAACTAGGAAGATTGTTATTGCAAAAA 2280 consensus_13986#1 ------------------------------------------------------------ consensus_13986#0 AAAAAAAAAAAACACTGTCATGCCGTT 2307 consensus_13986#1 --------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||