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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 140 cluster # 140       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_140#0 length = 764 sequences # 2  

consensusID : consensus_140#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 764
fasta sequence
                              [GAGTTGGTGATTGTTTCCATGCTGAGTGAAGAGGTGATACCTAGACAAAAGCATAATATACAAGATCATAATTCCAGTGTCAAGTGATAGACTGATGGTAACTCAGGTGAACAGTCTCAAAGGACAAGTTTGCTGAGGCAGGTTTAGATTGGAAGAAGTTTGGACAACAAGGTGTTAATCCTCCCCTGTTAGTGACATCTTAAGGTACCAATTCAACTGAGATATACTGAAAATCAAGGGGTCATAGTTGTTTTTAGGCCATCAACAAATTATCTTTGTTTCTATGTGACCAGGTATGCTATTAAAATCAAGGATGGTGTAAATATTCAGTGCAAGTATTCTCTGTTGAACTCAAATATTGGTGTTACAATGGATATTTGTTATTCCATTTCTGCGAAAATAAGCATGCCAGAGAAATGGAGCGCCTGACGGTCTTACACGAGCAGTTGGGGTTCACATAAAGATTCATTGTCAGTGCAGCTAAACTTTGCATGATATATCAGATGCGGCTATGAAATCGTGAGAAGAGATAATCTGTGGTATCTGATCAGGTTGCTATCATGGTGCAGCAGGCAAGTAGCACAGTGGCTGATTATGTGTTGCCAAGCTGAAGATTCTGTTCAGTGAAGTCTAACAGTGGAGCTGTGGACGCATCTTCATATCTGTGGCTNCCTCTGGTGNTGTAAGNTGTACATTTCCTTACAATACTTCATCAAACTAGNTGCTTAATTCATATACTTTGCCTGAAAGTTAAAAAAAAAAAA]

[+] EMBL CA766912             [GAGTTGGTGATTGTTTCCATGCTGAGTGAAGAGGTGATACCTAGACAAAAGCATAATATACAAGATCATAATTCCAGTGTCAAGTGATAGACTGATGGTAACTCAGGTGAACAGTCTCAAAGGACAAGTTTGCTGAGGCAGGTTTAGATTGGAAGAAGTTTGGACAACAAGGTGTTAATCCTCCCCTGTTAGTGACATCTTAAGGTACCAATTCAACTGAGATATACTGAAAATCAAGGGGTCATAGTTGTTTTTAGGCCATCAACAAATTATCTTTGTTTCTATGTGACCAGGTATGCTATTAAAATCAAGGATGGTGTAAATATTCAGTGCAAGTATTCTCTGTTGAACTCAAATATTGGTGTTACAATGGATATTTGTTATTCCATTTCTGCGAAAATAAGCATGCCAGAGAAATGGAGCGCCTGACGGTCTTACACGAGCAGTTGGGGTTCACATAAAGATTCATTGTCAGTGCAGCTAAACTTTGCATGATATATCAGATGCGGCTATGAAATCGTGAGAAGAGATAATCTGTGGTATCTGATCAGGTTGCTATCATGGTGCAGCAGGCAAGTAGCACAGTGGCTGATTATGTGTTGCCAAGCTGAAGATTCTGTTCAGTGAAGTCTAACAGTGGAGCTGTGGACGCATCTTCATATCTGTGGCTNCCTCTGGTGNTGTAAGNTGTACATTTCCTTACAATACTTCATCAAACTAGNTGCTTAATTCATATACTTTG                      ]
[-] EMBL CA760999             [                                                                        TCCAGTGTCAAGTGATAGACTGATGGTAACTCAGGTGAACAGTCTCAAAGGACAAGTTTGCTGAGGCAGGTTTAGATTGGAAGAAGTTTGGACAACAAGGTGTTAATCCTCCCCTGTTAGTGACATCTTAAGGTACCAATTCAACTGAGATATACTGAAAATCAAGGGGTCATAGTTGTTTTTAGGCCATCAACAAATTATCTTTGTTTCTATGTGACCAGGTATGCTATTAAAATCAAGGATGGTGTAAATATTCAGTGCAAGTATTCTCTGTTGAACTCAAATATTGGTGTTACAATGGATATTTGTTATTCCATTTCTGCGAAAATAAGCATGCCAGAGAAATGGAGCGCCTGACGGTCTTACACGAGCAGTTGGGGTTCACATAAAGATTCATTGTCAGTGCAGCTAAACTTTGCATGATATATCAGATGCGGCTATGAAATCGTGAGAAGAGATAATCTGTGGTATCTGATCAGGTTGCTATCATGGTGCAGCAGGCAAGTAGCACAGTGGCTGATTATGTGTTGCCAAGCTGAAGATTCTGTTCAGTGAAGTCTAACAGTGGAGCTGTGGACGCATCTTCATATCTGTGGCTCCCTCTGGTGTTGTAAGTTGTACATTTCCTTACAATACTTCATCAAACTAGTTGCTTAATTCATATACTTTGCCTGAAAGTTAAAAAAAAAAAA]


>consensus_140#0 GAGTTGGTGATTGTTTCCATGCTGAGTGAAGAGGTGATACCTAGACAAAAGCATAATATA CAAGATCATAATTCCAGTGTCAAGTGATAGACTGATGGTAACTCAGGTGAACAGTCTCAA AGGACAAGTTTGCTGAGGCAGGTTTAGATTGGAAGAAGTTTGGACAACAAGGTGTTAATC CTCCCCTGTTAGTGACATCTTAAGGTACCAATTCAACTGAGATATACTGAAAATCAAGGG GTCATAGTTGTTTTTAGGCCATCAACAAATTATCTTTGTTTCTATGTGACCAGGTATGCT ATTAAAATCAAGGATGGTGTAAATATTCAGTGCAAGTATTCTCTGTTGAACTCAAATATT GGTGTTACAATGGATATTTGTTATTCCATTTCTGCGAAAATAAGCATGCCAGAGAAATGG AGCGCCTGACGGTCTTACACGAGCAGTTGGGGTTCACATAAAGATTCATTGTCAGTGCAG CTAAACTTTGCATGATATATCAGATGCGGCTATGAAATCGTGAGAAGAGATAATCTGTGG TATCTGATCAGGTTGCTATCATGGTGCAGCAGGCAAGTAGCACAGTGGCTGATTATGTGT TGCCAAGCTGAAGATTCTGTTCAGTGAAGTCTAACAGTGGAGCTGTGGACGCATCTTCAT ATCTGTGGCTNCCTCTGGTGNTGTAAGNTGTACATTTCCTTACAATACTTCATCAAACTA GNTGCTTAATTCATATACTTTGCCTGAAAGTTAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)