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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14026#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1958 fasta sequence
[GATTGCCGCTGGTGGC--AATCTTCTTCTTGTTGGACCAAACCCTAGCTAGCAGCAGCAACCATGGCAAACCCTAGGCCTCCCTATGTGTTGCTGGAGAGAGTAGTGTTTTTCGGAGGACGCGAGTTACCCGACGGCACATGGAAAGATGCCGCA-G---T-A-GG-T-CATCGGATGGAGCAGAGCGCGGC-TGCTGAGTCGGCGAGAGGCGATGGAGGCGATGGAACCCCATCCCTTCCTCGCCGATCCTCCGCAAGTGAGCTCCCTGCGGATGATGTCGCCGACGCCCGCGCA-CG-GCAGCAGC-TGGGATCCATCCGCGACGGCGACATCGCCAGCACCCACAAGGGCATCGTCGTCATCTACGCCGGCTTCTACCGACCAGGCTGCTCCGATGACCTCGGGGGATGCTACCTCCTCTACGACGCCCCCACCAACGCCCTCACCGCCATCCCCCCGCTGCCCGACTCGCCTCGCTTCCCCACCTTGCTACACCTCGGCCGCACCGCCGTCCTCGTCGACGCCTCCCGCTCTGCCGATGATTACATCCTCGCCGATATCGTCACCAACTCCGGCCTGGGCCTCCCCGAAGCCACCATCTTCGCATGGTCATCGCTGACCATGAAGAAGAGCGGCGGCGAGTGGGTCAAGTCCTCCATTCCCCGCCTCCCTCTCCCTGCACATCTATGTGGTCCAAAACACTTGTTCCAGATCGACCTCGCCTTCTCCCTGGACAGCGGCCGCATCTGCTGGGTTGATCTCCTACAGGGCATCTTGTTCTGCGACCGCATCTTGGCACCGGATGGCCCCAAGTTGGGGTTCATTCCGTTGCCCACTGGGTATTGCATCGATGTCCATCACAGGCTCCGCCATCAGATGATGCCACTAGCCCGGCGTTCCATGGCCTGCGTCTCTGGCGCCGTCAAGTTTGTCGCCTTGGTTGGCTTGGAAGATATTCATTGCCCCCCCAATGAGGTGATGCTCAAGACATGGGTTCTGTCCCCTGATTTCAAGGAGTGGAAGGAGGATAGCAGGTCCTTATCTGTGGAAGAGATGTGGGCAAGTGAGAGCTTCAAGCAAATGGGGTTGCCATGTGTTGTACCAGTTTCCCCTGTCCTCAGCCTGACCCAAGATGGGGTAATGTATACCATTCTGAATGTCATCGAGCAGGTACCTGCACAAGTTGATGAATTTGGGATCGTCGTTGTCGATGATGACCTGGTGCCCATTGCCAATTATATGATCCGCTTCGACATTCGGCGAAA-CAAGGTCCT-GTCC-TCC-ACAAAGATATCTCAA--CATGGTG-AATTG-CAGTGGCTTATA-CCCAATCT-CATTG-CCACTGACTTCACTGCATACCTACAGGACCACCAGAGAGCTGAAGAAGCAGGCAAGGTAGGAGCAAGCGCCAAGGGGAAGCGCAAGCAGATGGAGTACTACTGAATGATATGTAGTATATTTCTGCTATTTATCATGCACATAACATATCGCTTTTTTTAGCTTACATCCTGTGACTGTGAGATGTAAGGTCAAATGTGTTTAGGTTAACCATCAGAGCTTATTTTGTCACTACCAGACCTTATTTTAATGACTAAGCCTAGCAGTTAAACTGAATGGTAACCAGTATGTATGTGTAATCATCGTGGATTTATGTCATACTACTAATAGTGTTGGGCTCTTCAAATCCAACATTGTACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCTTGGTTTGGCGTTTCTTAAAAAAGGGGAAATTTGGGGGGGGAAAAAAAAATTCCCCCTAAAGGGGGGGGTTTAAAAAATAAGGGGGGGGGGTTTAAAAAAGGGGGGAGGGGAAAAAACCGGGGGTTAACAAAAAAAAAGGGTTTGGAAAAAAATCCCTTTTTCCAAAGGGGGGA]
[+] EMBL AU064050 [ ATTGCCGCTGGTGGC AATCTTNTTCTTGTTGGACCAAACCCTAGCTAGCAGCAGCAACCATGGCAAACCCTAGGCCTCCCTATGTTTTGCTGGAGANAGTAGTGTTTTTCGGAGGACGCGAGTTACCCGACGGCACATGGAAANATGCCGCANA TAA GT T CATCGGATGGAGCAGAGCGCGGC TGCTGAGTCGGCGAGAGGCGATGGAGGCGATGGAACCCCATCCCTTCCTCGCCGATCCTCCGCAAGTAAGCTCCCTGCGGATNATGTCGCCGACGCCCGCGCA CG GCA NAGC TGGGATCCATCCGCNACGGCGACATCGCCAGCAACCACAAGGGCATCGTC ]
[+] EMBL AU065021 [ ATTGCCGCTGGTGGC AATCTTCTTCTTGTTGGACCAAACCCTAGCTAGCAGCAGCAACCATGGCAAACCCTAGGCCTCCCTATGTGTTGCTGGAGAGAGTAGTGTTTTTCGGAGGACGCGAGTTACCCGACGGCACATGGAAAGATGCCGCA GA T A NG T CATCGGATGGAGCAGAGCGCGGCTTGCTGAGTCGGCGAGAGGCGATGGAGGCGATGGAACCCCATCCCTTCCTCGCCGATCCTCCG AAGTGAGCTTCCTTCGGATGATGTCGCCGACGGCCGC ]
[+] EMBL AU065059 [ ATTGCCGCTGGTGGC AATCTTCTTCTTGTTGGACCAAACCCTAGCTAGCAGCAGCAACCATGGCAAACCCTAGGCCTCCCTATGTGTTGCTGGAGAGAGTAGTGTTTTTCGGAGGACGCGAGTTACCCGACGGCACATGGAAAGATGCCGCA GA T ATGN T CATCGGATGGAGCAGAGCGCGGC TGCTGAGTCGGCGAGAGGCGATGGAGGCGATGGAACCCCATCCCTTCCTCGCCGATCCTCCGCAAGTGAGCTCCCTGCGGATGATGTCGCCGACGGCCGCGCA CG GCAG AGCTTGGGATCCATCCGCGACGGCGACATCG CAGCACCCACAAGGGNATCGTCGTCATCTACGGCGGTTTnt ]
[+] EMBL C74583 [ TTGCCGCTGGTGGC AATCTTCTTCTTGTTGGACCAAACCCTAGCTAGCAGCAGCAACCATGGCAAACCCTAGGCCTCCCTATGTGTTGCTGGAGAGAGTAGTGTTTTTCGGAGGACGCGAGTTACCCGACGGCACATGGAAAGATGCCGCA N T A GGTT CATCGGATGGAGCAGAGCGCGGC TGCTGAGTCGGCGAGAGGCGATGGAGGCGATGGAACCCCATCCCTTCCTCGCCGATCCTCCGCAAGTGAGCTCCCTNCGGATGAT ]
[+] EMBL AK066557 [ GCCGCTGGTGGC AATCTTCTTCTTGTTGGACCAAACCCTAGCTAGCAGCAGCAACCATGGCAAACCCTAGGCCTCCCTATGTGTTGCTGGAGAGAGTAGTGTTTTTCGGAGGACGCGAGTTACCCGACGGCACATGGAAAGATGCCGCA GGCAT A G T CATCGGATGGAGCAGAGCGCGGC TGCTGAGTCGGCGAGAGGCGATGGAGGCGATGGAACCCCATCCCTTCCTCGCCGATCCTCCGCAAGTGAGCTCCCTGCGGATGATGTCGCCGACGCCCGCGCA CGCGCAGCAGC TGGGATCCATCCGCGACGGCGACATCGCCAGCACCCACAAGGGCATCGTCGTCATCTACGCCGGCTTCTACCGACCAGGCTGCTCCGATGACCTCGGGGGATGCTACCTCCTCTACGACGCCCCCACCAACGCCCTCACCGCCATCCCCCCGCTGCCCGACTCGCCTCGCTTCCCCACCTTGCTACACCTCGGCCGCACCGCCGTCCTCGTCGACGCCTCCCGCTCTGCCGATGATTACATCCTCGCCGATATCGTCACCAACTCCGGCCTGGGCCTCCCCGAAGCCACCATCTTCGCATGGTCATCGCTGACCATGGAGAAGAGCGGCGGCGGGTGGGTCAAGTCCTCCATTCCCCGCCTCCCTCTCCCTGCACATCTATGTGGTCCAAAACACTTGTTCCAGATCGACCTCGCCTTCTCCCTGGACAGCGGCCGCATCTGCTGGGTTGATCTCCTACAGGGCATCTTGTTCTGCGACCGCATCTTGGCACCGGATGGCCCCAAGTTGGGGTTCATTCCGTTGCCCACTGGGTATTGCATCGATGTCCATCACAGGCTCCGCCATCAGATGATGCCACTAGCCCGGCGTTCCATGGCCTGCGTCTCTGGCGCCGTCAAGTTTGTCGCCTTGGTTGGCTTGGAAGATATTCATTGCCCCCCCAATGAGGTGATGCTCAAGACATGGGTTCTGTCCCCTGATTTCAAGGAGTGGAAGGAGGATAGCAGGTCCTTATCTGTGGAAGAGATGTGGGCAAGTGAGAGCTTCAAGCAAATGGGGTTGCCATGTGTTGTACCAGTTTCCCCTGTCCTCAGCCTGACCCAAGATGGGGTAATGTATACCATTCTGAATGTCATCGAGCAGGTACCTGCACAAGTTGATGAATTTGGGATCGTCGTTGTCGATGATGACCTGGTGCCCATTGCCAATTATATGATCCGCTTCGACATTCGGCGAAA CAAGGTCCT GTCC TCC ACAAAGATATCTCAA CATGGTG AATTG CAGTGGCTTATA CCCAATCT CATTG CCACTGACTTCACTGCATACCTACAGGACCACCAGAGAGCTGAAGAAGCAGGCAAGGTAGGAGCAAGCGCCAAGGGGAAGCGCAAGCAGATGGAGTACTACTGAATGATATGTAGTATATTTCTGCTATTTATCATGCACATAACATATCGCTTTTTTTAGCTTACATCCTGTGACTGTGAGATGTAAGGTCAAATGTGTTTAGGTTAACCATCAGAGCTTATTTTGTCACTACCAGACCTTATTTTAATGACTAAGCCTAGCAGTTAAACTGAATGGTAACCAGTATGTATGTGTAATCATCGTGGATTTATGTCATACTACTAATAGTGTTGGGCTCTTCAAATCCA ]
[+] EMBL C26917 [ggtcnctGCTGGTGGCTGCAT TNCTTCTTGTTGGACCAAACCCTAGCTAGCAGCAGCAACCATGGCAAACCCTAGGCCTCCCTATGTTTTGCTGGAGANAGTAGTGTTTTTNGGAGGACGCGAGTTACCCGACGGCACATGGAAANATGCCGCACN T ANGG T CATCGGATGGAGCAGAGCGCGGC TGCTGAGTCGGCGANAGGCGATGGAGGCGATGGAACCCCATCCCTTCCTCGCCGATCCTCCGCAAGT ]
[+] EMBL C73180 [ TTGTTGGACCAAACCCTAGCTAGCAGCAGCAACCATGGCAAACCCTAGGCCTCCCTATGTNTTGCTGGAGAGAGTAGTGTTTTTCGGAGGACGCGAGTTACCCGACGGCACATGGAAAGATGCCGCA N T A GN T CATCGGATGGAGCAGAGCGCGGC TGCTGAGTCGGCGAGAGGCGATGGAGGCGATGGAACCCCATCCCTTCCTCGCCGATCCTCCGCAAGTAAGCTCCCTGCGGATGATGTCGCCGACGNCCGCGCA CG GCA NAGC TGGGATCCATCCGCGACGGCGACATCGCCAGCANCCACAAGGGCATCGTCGTCATCTACGCCGGCTTCTACCGACCAGGCTGCTCCGATGACCTCGGGGGATGCTACCTCCTNTACGACGGCCCCAACAACGGCCTTAACGCCAT CCCCCGTTGCCCGATTTG CTTG TTTCCCAACTTGnt ]
[+] EMBL C73623 [ GTTGGACCAAACCCTAGCTAGCAGCAGCAACCATGGCAAACCCTAGGCCTCCCTATGTGTTGCTGGAGAGAGTAGTGTTTTTCGGAGGACGCGAGTTACCCGACGGCACATGGAAAGATNCCGCA N A GN TNCATCGGATGGAGCAGA NNNGGC TGCTGAGTCNGCGAGAGGCGATGGAGGCGATGGAACCCCATNCCTTNCTCNCCGATCCTCCGCAAGTGAGCTCCCTGCNGATGATGTCGCCGACGCCCGCGCA C GCAGCAGC TGGGATCCATCCGCGACGG GACATCG CAGCACCCACAAGGGCATCGTC ]
[+] EMBL AU094932 [ TGCGGATGATGTCG CGA GCCGGAAAACCGCGCAGCAGC TGGGATCCATCCGCGACGGCGACATCGCCAGCACCCACAAGGGNATCGTCGTNATCTACGCCGGCTTCTACCGACCAGGCTGCTCCGATGACCTCGGGGGATGCTACTTCCTCTACGACGCCCCNACCAACGCCCTCACCGCNATCCCCCCGCTGCCCGACTCGCCTCGCTTCCCCACCTTGCTACACCTCGGCCGCACCGCCGTCCTCGTCGACGCCTCCCGCTCTGCCGATGATTACATCCTCGCCGATATCGTCACCAACTCCGGNCTGGGCCTCCCCGAAGCCACCATCTTCGCATGGTCATCGCTGACCATGAAGAAGAGCGGCGGCGAGTGGGTCAAGTCCTCCATTCCCCGCCTCCGGGGCCCTGCACATCTATGTGGTCCAAAACACTTGTTCCAGATCGACCTCGCCTTC ]
[+] EMBL AU108161 [ ACCTCGGCCGCACCGCCGTCCTCGTCGACGCCTCCCGCTCTGCCGATGATTACATCCTCGCCGATATCGTCACCAACTCCGGCCTGGGCCTCCCCGAAGCCACCATCTTCGCATGGTCATCGCTGACCATGAAGAAGAGCGGCGGCGAGTGGGTCAAGTCCTCCATTCCCCGCCTCCCTCTCCCTGCACATCTATGTGGTCCAAAACACTTGTTCCAGATCGACCTCGCCTTC ]
[+] EMBL OSC244 [ TGCTGGGTTGATCTCCTACAGGGCATCTTGTTCTGCGACCGCATCTTGGCACCGGATGGCCCCAAGTTGGGGTTCATTCCGTTGCCCACTGGGTATTGCATCGATGTCCATCACAGGCTCCGCCATCAGATGATGCCACTAGCCCGGCGTTCCATGGCCTGCGTCTCTGGCGCCGTCAAGTTTGTCGCCTTGGTTGGCTTGGAAGATATTCATTGCCCCCCCAATGAGGTGATGCTCAAGACATGGGTTCTGTCCCCTGATTTCAAGGAGTGGAAGGAGGATAGCAGGTCCTTATCTGTGGAAGAGATGTGGGCAAGTGAGAGCTTCAAGCAAATGGGGTTGCCATGTGTTGTACCAGTTTCCCCTGTCCTCAGCCTGACCCAAGATGGGGTAATGTATACCATTCTGAATGTCATCGAGCAGGTACCTGCACAAGTTGATGAATTTGGGATCGTCGTTG ]
[+] EMBL AU094390 [ GAAACCAAGGTCCTGGTCCTTCCNACAAGGATATCTCAAACCATGGTGAAATTGCCAGTGGCTTATACCCCAATCTCCATTGCCCACTGACTTCACTGCATACCTACAGGACCACCAGAGAGCTGAAGAAGCAGGCAAGGTAGGAGCAAGCGCCAAGGGGAAGCGCAAGCAGATGGAGTACTACTGAATGATATGTAGTATATTTCTGCTATTTATCATGCACATAACATATCGCTTTTTTTAGCTTACATCCTGTGACTGTGAGATGTAAGGTCAAATGTGTTTAGGTTAACCATCAGAGCTTATTTTGTCACTACCAGACCTTATTTTAATGACTAAGCCTAGCAGTTAAACTGAATGGTAACCAGTATGTATGTGTAATCATCGTGGATTTATGTCATACTACTAATAGTGTTGGGCTCTTCAAATCCAACATTGTACCAA ]
[+] EMBL CA764576 [ GCAGATGGAGTACTACTGAATGATATGTAGTATATTTCTGCTATTTATCATGCACATAACATATCGCTTTTTTTTGCTTACATCCTGTGACTGTGAGATGTAAGGTCAAATGTGTTTAGGTTAACCATCAGAGCTTATTTTGTCACTACCAGACCTTATTTTAATGACTAAGCCTAGCAGTTAAACTGAATGGTAACCAGTA ]
[+] EMBL CF319442 [ ATCATCGTGGATTTATGTCATACTACTAATAGTGTTGGGCTCTTCAAATCCAACATTGTNCCANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCTTGGTTTGGCGTTTCTTAAAAAAGGGGAAATTTGGGGGGGGAAAAAAAAATTCCCCCTAAAGGGGGGGGTTTAAAAAATAAGGGGGGGGGGTTTAAAAAAGGGGGGAGGGGAAAAAACCGGGGGTTAACAAAAAAAAAGGGTTTGGAAAAAAATCCCTTTTTCCAAAGGGGGGA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||