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Oryza sativa
cluster # 1404 cluster # 1404       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1404#0 length = 2735 sequences # 2  

consensusID : consensus_1404#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2735
fasta sequence
                              [GCGCCTCTAATTCCTCCTCCTCGCGCCCTAGTCCCCTCGCCTTCCCCTCCCGTCTCCTCGCCCGCCGGCCGCCGCCTGCGACGATCCCCATCCCGCGAGCGGCAGCGGTACCGGCGGTCCTCTGCCGCACCCTCGCCGCGGTGAGCTCCCGGTCAGCAGTTTCCACATCTCAGCTAAGGACTGGAATGGCCAAACCCAATGGCAAAGAGAAAACGGGTGACACGGGATTGTCGATGGCTCCTCCAAAGATTTCCAAGGATAGATTTGATGCTGCTATCAGAGCCATGGCTGATATTGGTATCCTAAAGGAAACTGCTGCGCCCGTGTTGAATAATCTACTAAACTTATTCGATTACAACTGGGTGCATATAGAAGCTGATAATTATCTGGCTCTTGCTGATGCTATATTTTGTGATTCAGATCCCAAAGAAGGACAGAAAAGGCAAGCTAATGAGACAAATCTTGATGCAGACCAATCTAACAAGAAGCTTAAGACAAAAAAGCGTTCTCAAAATCCTACATCCAAGATGCATGGCAATGACAATAGAGAGTTTGTTGAAGCTCCACCACAGCAGGGACGAGGCACACTGTCTGCCCGAACTGTTAATGGGAAGAAAGTCACCAGGGCCCACTTGGAGTTGCCTTCTTCACAATTACTGATCAAGGAACCACATACATGCCCTAGCATTGCAAAGAATACAACAATTGTTGAAAATAATTCTGCTGTATTATGCCATGGTCAAGACCTTCAAACTTTTGAGGTCCCAGTAGCAACTACTTGTCCGCAAGTTGTAGCCCCCAGTACTCGCAAAGATGCACGTAGGACTTCTGGTGCTCGCCATGATCAGAAGCATGAAGGTGTATCTGGTGCGCATGAAAGGAACAGGGCTGTTGCGTGTAGCAACCAGGAAATTGTAAGCAGCAAGGATTCTCCATCCAACATTGAGGTAGTTTTGTCAAATTATGGAGCTGGGAAACTATCATTCACATACAACTCTTCCCTGGCAAACCGTTCTGATTTTCATCTGCCTGACATTAAATTAATTTGCAAGAAAATGGAGGCTAGATGCCTTAGGAAATACAAGAGCCTAGAACCCAATTTCTCTTTTAAGAATCTTATTAAAGATACTTGCCAGTGTATTGTTGAATCTAGTGGACCTAGACATGAAGGCATCATACAAACTGTTCCTGCCCTGGACATTCTGTCCAAACCTTCAGTGCCGCAAATATTGCAGTCAAATCAAGCTAATTCCGCTTTTATGCCACCTAATAATGTCATGAGCCTTGGTGGTACTTCTTCCTCTTGCACTGTT-GCTGGAGTTAGCCAGAATTCTAGTAATATG-CCGGTTGTTCCGCATCAACTA-CATATTGGTGCCAACAGACCACCTCATGATGTCAATGATATCACAAAAGGTGAAGAACGTTTAAGGATTCCAATTATTAATGAATATGGCAAT-GGGATTCTTCCTCCTCCATTTCACTACATACCACACAATATCACACTCCAAGAAGCCTATGTAAACATCTCCCTTGCTAGAATCGGAGATGACAATTGCTGTTCTGATTGTTTCAGAGATTGTCTGGCACAATCACTTCCTTGTGCGTGTGCTGCAGAAACAGGAGGAGAGTTTGCTTATACAACAGATGGCCTTCTTAAGGGAGCATTTCTAGATAGCTGTATCTCAATGATTCGAGAACCACTTAAACATCCCCATTTCTACTGCAAGATTTGCCCAAACGAACGAATGAAGATAGAAGTAAATTCTGATTCATCAAACACAGAAATGAATCCTGGTCCTTGTAAAGGACACCTTACAAGGAAATTCATCAAGGAGTGCTGGAGAAAATGCGGCTGCACTAGAAATTGTGGAAACCGTGTGGTGCAGCGAGGCATCACACGCCATTTACAGGTGTTCTTAACCCCTGAAAAAAAAGGATGGGGATTGCGCAGTACTGAGAAACTTCCTCGAGGTGCTTTTGTTTGTGAGTATGTTGGTGAAATATTAACGAACATTGAGTTGTATGACCGTACAATTCAAAAGACTGGTAAAGCAAAGCACACATACCCATTGTTACTTGATGCCGACTGGGGTACTGAAGGTGTTCTTAAGGATGAGGAAGCCCTTTGTCTAGATGCCACGTTTTATGGTAACGTCGCAAGATTTATAAACCACAGGTGCTTTGATGCTAATATTATAGGAATACCTGTTGAGATCGAGACGCCCGACCACCATTATTACCATCTGGCGTTCTTCACAACAAGGATAATAGAGCCTTTTGAGGAACTCACATGGGACTATGGGATTGATTTTGATGATGTCGACCATCCTGTGAAGGCATTCAAATGTCATTGCGGAAGTGAGTTTTGCCGAGACAAAACGCGCAGATCTAAATCGAGGGCGCGGGTTTAACCTATGAATTCTCTACTCTGCTATTCAAGTGATTCAAGGAAGTCAATGCAGAGCCATTGATGGTATCGTCCAGAAAGATGATATAGTAATTTTTCTCTGGAATAGGATAAACAATCCAGATTCCAGAGTTACAGACTGCTGGTTCAGCACTTAAATATTCCAACAGCTCATACGAACTGCTGTCCTTTTTTTCCAAGCTTGGTTGCCCGCAAAGCAGTATGCTTGGTTGCCCGTTCTTTGTTCCTTTTACCAATACCAAGTGATGTAAAGAATTCTGGAATGTGAACTCTCTGCCATGATATAGCTCTAGCTCAATGCATTATA]

[+] EMBL AK100391             [GCGCCTCTAATTCCTCCTCCTCGCGCCCTAGTCCCCTCGCCTTCCCCTCCCGTCTCCTCGCCCGCCGGCCGCCGCCTGCGACGATCCCCATCCCGCGAGCGGCAGCGGTACCGGCGGTCCTCTGCCGCACCCTCGCCGCGGTGAGCTCCCGGTCAGCAGTTTCCACATCTCAGCTAAGGACTGGAATGGCCAAACCCAATGGCAAAGAGAAAACGGGTGACACGGGATTGTCGATGGCTCCTCCAAAGATTTCCAAGGATAGATTTGATGCTGCTATCAGAGCCATGGCTGATATTGGTATCCTAAAGGAAACTGCTGCGCCCGTGTTGAATAATCTACTAAACTTATTCGATTACAACTGGGTGCATATAGAAGCTGATAATTATCTGGCTCTTGCTGATGCTATATTTTGTGATTCAGATCCCAAAGAAGGACAGAAAAGGCAAGCTAATGAGACAAATCTTGATGCAGACCAATCTAACAAGAAGCTTAAGACAAAAAAGCGTTCTCAAAATCCTACATCCAAGATGCATGGCAATGACAATAGAGAGTTTGTTGAAGCTCCACCACAGCAGGGACGAGGCACACTGTCTGCCCGAACTGTTAATGGGAAGAAAGTCACCAGGGCCCACTTGGAGTTGCCTTCTTCACAATTACTGATCAAGGAACCACATACATGCCCTAGCATTGCAAAGAATACAACAATTGTTGAAAATAATTCTGCTGTATTATGCCATGGTCAAGACCTTCAAACTTTTGAGGTCCCAGTAGCAACTACTTGTCCGCAAGTTGTAGCCCCCAGTACTCGCAAAGATGCACGTAGGACTTCTGGTGCTCGCCATGATCAGAAGCATGAAGGTGTATCTGGTGCGCATGAAAGGAACAGGGCTGTTGCGTGTAGCAACCAGGAAATTGTAAGCAGCAAGGATTCTCCATCCAACATTGAGGTAGTTTTGTCAAATTATGGAGCTGGGAAACTATCATTCACATACAACTCTTCCCTGGCAAACCGTTCTGATTTTCATCTGCCTGACATTAAATTAATTTGCAAGAAAATGGAGGCTAGATGCCTTAGGAAATACAAGAGCCTAGAACCCAATTTCTCTTTTAAGAATCTTATTAAAGATACTTGCCAGTGTATTGTTGAATCTAGTGGACCTAGACATGAAGGCATCATACAAACTGTTCCTGCCCTGGACATTCTGTCCAAACCTTCAGTGCCGCAAATATTGCAGTCAAATCAAGCTAATTCCGCTTTTATGCCACCTAATAATGTCATGAGCCTTGGTGGTACTTCTTCCTCTTGCACTGTT GCTGGAGTTAGCCAGAATTCTAGTAATATG CCGGTTGTTCCGCATCAACTA CATATTGGTGCCAACAGACCACCTCATGATGTCAATGATATCACAAAAGGTGAAGAACGTTTAAGGATTCCAATTATTAATGAATATGGCAAT GGGATTCTTCCTCCTCCATTTCACTACATACCACACAATATCACACTCCAAGAAGCCTATGTAAACATCTCCCTTGCTAGAATCGGAGATGACAATTGCTGTTCTGATTGTTTCAGAGATTGTCTGGCACAATCACTTCCTTGTGCGTGTGCTGCAGAAACAGGAGGAGAGTTTGCTTATACAACAGATGGCCTTCTTAAGGGAGCATTTCTAGATAGCTGTATCTCAATGATTCGAGAACCACTTAAACATCCCCATTTCTACTGCAAGATTTGCCCAAACGAACGAATGAAGATAGAAGTAAATTCTGATTCATCAAACACAGAAATGAATCCTGGTCCTTGTAAAGGACACCTTACAAGGAAATTCATCAAGGAGTGCTGGAGAAAATGCGGCTGCACTAGAAATTGTGGAAACCGTGTGGTGCAGCGAGGCATCACACGCCATTTACAGGTGTTCTTAACCCCTGAAAAAAAAGGATGGGGATTGCGCAGTACTGAGAAACTTCCTCGAGGTGCTTTTGTTTGTGAGTATGTTGGTGAAATATTAACGAACATTGAGTTGTATGACCGTACAATTCAAAAGACTGGTAAAGCAAAGCACACATACCCATTGTTACTTGATGCCGACTGGGGTACTGAAGGTGTTCTTAAGGATGAGGAAGCCCTTTGTCTAGATGCCACGTTTTATGGTAACGTCGCAAGATTTATAAACCACAGGTGCTTTGATGCTAATATTATAGGAATACCTGTTGAGATCGAGACGCCCGACCACCATTATTACCATCTGGCGTTCTTCACAACAAGGATAATAGAGCCTTTTGAGGAACTCACATGGGACTATGGGATTGATTTTGATGATGTCGACCATCCTGTGAAGGCATTCAAATGTCATTGCGGAAGTGAGTTTTGCCGAGACAAAACGCGCAGATCTAAATCGAGGGCGCGGGTTTAACCTATGAATTCTCTACTCTGCTATTCAAGTGATTCAAGGAAGTCAATGCAGAGCCATTGATGGTATCGTCCAGAAAGATGATATAGTAATTTTTCTCTGGAATAGGATAAACAATCCAGATTCCAGAGTTACAGACTGCTGGTTCAGCACTTAAATATTCCAACAGCTCATACGAACTGCTGTCCTTTTTTTCCAAGCTTGGTTGCCCGCAAAGCAGTATGCTTGGTTGCCCGTTCTTTGTTCCTTTTACCAATACCAAGTGATGTAAAGAATTCTGGAATGTGAACTCTCTGCCATGATATAGCTCTAGCTCAATGCATTATA]
[+] EMBL CF323451             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               gATTATGGAGCTGGGAAACTATCATTCACATACAACTCTTCCCTGGCAAACCGTTCTGATTTTCATCTGCCTGACATTAAATTAATTTGCAAGAAAATGGAGGCTAGATGCCTTAGGAAATACAAGAGCCTAGAACCCAATTTCTCTTTTAAGAATCTTATTAAAGATACTTGCCAGTGTATTGTTGAATCTAGTGGACCTAGACATGAAGGCATCATACAAACTGTTCCTGCCCTGGACATTCTGTCCAAACCTTCAGTGCCGCAAATATTGCAGTCAAATCAAGCTAATTCCGCTTTTATGCCACCTAATAATGTCATGAGCCTTGGTGGTACTTCTTCCTCTTGCACTGTTNGCTGGAGTTAGCCAGAATTCTAGTAATATGCCCGGTTGTTCCGCATCAACTACCATATTGGTGCCAACAGACCACCTCATGATGTCAATGATATCACAAAAGGTGAAGAACGTTTAGGGATTCCAATTATTAATGAATATGGCAATGGGGATTCTTCCTCCTCCATTTCACTACATACCACACAATATCACACTCCAAGAAGCCTATGTAAACATCTCCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]


>consensus_1404#0 GCGCCTCTAATTCCTCCTCCTCGCGCCCTAGTCCCCTCGCCTTCCCCTCCCGTCTCCTCG CCCGCCGGCCGCCGCCTGCGACGATCCCCATCCCGCGAGCGGCAGCGGTACCGGCGGTCC TCTGCCGCACCCTCGCCGCGGTGAGCTCCCGGTCAGCAGTTTCCACATCTCAGCTAAGGA CTGGAATGGCCAAACCCAATGGCAAAGAGAAAACGGGTGACACGGGATTGTCGATGGCTC CTCCAAAGATTTCCAAGGATAGATTTGATGCTGCTATCAGAGCCATGGCTGATATTGGTA TCCTAAAGGAAACTGCTGCGCCCGTGTTGAATAATCTACTAAACTTATTCGATTACAACT GGGTGCATATAGAAGCTGATAATTATCTGGCTCTTGCTGATGCTATATTTTGTGATTCAG ATCCCAAAGAAGGACAGAAAAGGCAAGCTAATGAGACAAATCTTGATGCAGACCAATCTA ACAAGAAGCTTAAGACAAAAAAGCGTTCTCAAAATCCTACATCCAAGATGCATGGCAATG ACAATAGAGAGTTTGTTGAAGCTCCACCACAGCAGGGACGAGGCACACTGTCTGCCCGAA CTGTTAATGGGAAGAAAGTCACCAGGGCCCACTTGGAGTTGCCTTCTTCACAATTACTGA TCAAGGAACCACATACATGCCCTAGCATTGCAAAGAATACAACAATTGTTGAAAATAATT CTGCTGTATTATGCCATGGTCAAGACCTTCAAACTTTTGAGGTCCCAGTAGCAACTACTT GTCCGCAAGTTGTAGCCCCCAGTACTCGCAAAGATGCACGTAGGACTTCTGGTGCTCGCC ATGATCAGAAGCATGAAGGTGTATCTGGTGCGCATGAAAGGAACAGGGCTGTTGCGTGTA GCAACCAGGAAATTGTAAGCAGCAAGGATTCTCCATCCAACATTGAGGTAGTTTTGTCAA ATTATGGAGCTGGGAAACTATCATTCACATACAACTCTTCCCTGGCAAACCGTTCTGATT TTCATCTGCCTGACATTAAATTAATTTGCAAGAAAATGGAGGCTAGATGCCTTAGGAAAT ACAAGAGCCTAGAACCCAATTTCTCTTTTAAGAATCTTATTAAAGATACTTGCCAGTGTA TTGTTGAATCTAGTGGACCTAGACATGAAGGCATCATACAAACTGTTCCTGCCCTGGACA TTCTGTCCAAACCTTCAGTGCCGCAAATATTGCAGTCAAATCAAGCTAATTCCGCTTTTA TGCCACCTAATAATGTCATGAGCCTTGGTGGTACTTCTTCCTCTTGCACTGTTGCTGGAG TTAGCCAGAATTCTAGTAATATGCCGGTTGTTCCGCATCAACTACATATTGGTGCCAACA GACCACCTCATGATGTCAATGATATCACAAAAGGTGAAGAACGTTTAAGGATTCCAATTA TTAATGAATATGGCAATGGGATTCTTCCTCCTCCATTTCACTACATACCACACAATATCA CACTCCAAGAAGCCTATGTAAACATCTCCCTTGCTAGAATCGGAGATGACAATTGCTGTT CTGATTGTTTCAGAGATTGTCTGGCACAATCACTTCCTTGTGCGTGTGCTGCAGAAACAG GAGGAGAGTTTGCTTATACAACAGATGGCCTTCTTAAGGGAGCATTTCTAGATAGCTGTA TCTCAATGATTCGAGAACCACTTAAACATCCCCATTTCTACTGCAAGATTTGCCCAAACG AACGAATGAAGATAGAAGTAAATTCTGATTCATCAAACACAGAAATGAATCCTGGTCCTT GTAAAGGACACCTTACAAGGAAATTCATCAAGGAGTGCTGGAGAAAATGCGGCTGCACTA GAAATTGTGGAAACCGTGTGGTGCAGCGAGGCATCACACGCCATTTACAGGTGTTCTTAA CCCCTGAAAAAAAAGGATGGGGATTGCGCAGTACTGAGAAACTTCCTCGAGGTGCTTTTG TTTGTGAGTATGTTGGTGAAATATTAACGAACATTGAGTTGTATGACCGTACAATTCAAA AGACTGGTAAAGCAAAGCACACATACCCATTGTTACTTGATGCCGACTGGGGTACTGAAG GTGTTCTTAAGGATGAGGAAGCCCTTTGTCTAGATGCCACGTTTTATGGTAACGTCGCAA GATTTATAAACCACAGGTGCTTTGATGCTAATATTATAGGAATACCTGTTGAGATCGAGA CGCCCGACCACCATTATTACCATCTGGCGTTCTTCACAACAAGGATAATAGAGCCTTTTG AGGAACTCACATGGGACTATGGGATTGATTTTGATGATGTCGACCATCCTGTGAAGGCAT TCAAATGTCATTGCGGAAGTGAGTTTTGCCGAGACAAAACGCGCAGATCTAAATCGAGGG CGCGGGTTTAACCTATGAATTCTCTACTCTGCTATTCAAGTGATTCAAGGAAGTCAATGC AGAGCCATTGATGGTATCGTCCAGAAAGATGATATAGTAATTTTTCTCTGGAATAGGATA AACAATCCAGATTCCAGAGTTACAGACTGCTGGTTCAGCACTTAAATATTCCAACAGCTC ATACGAACTGCTGTCCTTTTTTTCCAAGCTTGGTTGCCCGCAAAGCAGTATGCTTGGTTG CCCGTTCTTTGTTCCTTTTACCAATACCAAGTGATGTAAAGAATTCTGGAATGTGAACTC TCTGCCATGATATAGCTCTAGCTCAATGCATTATA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)