cluster # 14057

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Oryza sativa
cluster # 14057 cluster # 14057 Sequences # 15 consensus # 7

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14057#0 length = 653 sequences # 3
consensus_14057#1 length = 580 sequences # 6
consensus_14057#2 length = 561 sequences # 2

consensus_14057#3 length = 415 sequences # 1
consensus_14057#4 length = 396 sequences # 1
consensus_14057#5 length = 380 sequences # 1
consensus_14057#6 length = 358 sequences # 1

consensusID : consensus_14057#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 653
fasta sequence

                              [GAGCTGCAGGAATTCGGCACGAGTGATGGAAAGGTCTTCGCTGCTGGTGACACTCTTGTTTTCAACTGCGAACCGGGCGCACACAACGTGCTGGCCGTGGACGCGGCGACGTACAGGAGCTGCAAGGTGGGCAGCTCGGCGGACTCGGTGGCGGCGGCGACGGGGACCGCGTCGTTCCTCCTCAAGAAGGGCGTCAACTACTACATCTGCGGCGTCCCCGGCCACTGCGCCGCCGGGATGAAACTCCGGGTCGTCGCCAACTGATGAAACTCCGGCGACAGATCAATCCCTTAATTAATTAAAACTATGTGGGTGTCTCTGCAGCCTGAAGCAGCATATAGCTTGCTCGGTTTAGGGATTGGTCGCGTATATATAGTTGTAATTGTAGCCCTATGTACTGGAGTGGCTGACACTGGGTCTGTCATGCTCCTGCATCTGCATGCGTGCATGGCTGCATGCTATATATCAGCTTTGTGCGTTTTAAATAATGGCCCGAATGTGCACCTGTGTGGCTGTGTGGC-TGTTTGTTGGAACTTGGAAGTACTTATATATAATATATAGTTCCCTTCTATGGAAAAAGATTCCCAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACTGTCATGCCGTTATGTAGCGTATC]

[+] EMBL BE039227             [GAGCTGCAGGAATTCGGCACGAGTGATGGAAAGGTCTTCGCTGCTGGTGACACTCTTGTTTTCAACTGCGAACCGGGCGCACACAACGTGCTGGCCGTGGACGCGGCGACGTACAGGAGCTGCAAGGTGGGCAGCTCGGCGGACTCGGTGGCGGCGGCGACGGGGACCGCGTCGTTCCTCCTCAAGAAGGGCGTCAACTACTACATCTGCGGCGTCCCCGGCCACTGCGCCGCCGGGATGAAACTCCGGGTCGTCGCCAACTGATGAAACTCCGGCGACAGATCAATCCCTTAATTAATTAAAACTATGTGGGTGTCTCTGCAGCCTGAAGCAGCATATAGCTTGCTCGGTTTAGGGATTGGTCGCGTATATATAGTTGTGATTGTAGCCCTATGTACTGGAGTGGCTGACACTGGGTCTGTCATGCTCCTGCATCTGCATGCGTGCATGGCTGCATGCTATATATTAGCNTTGTGCGTTCTAAATAATGGCCCGAATGTGCACCCGTGGGGCTGTGTGGCTTGTTTGTTGGACCTGGGAAG ACCTATATATAATATATAGGTCCCTTCTATGGA                                                                              ]
[-] EMBL CF291441             [              tagctgggcTGATGGAAAGGTCTTCGCTGCTGGTGACACTCTTGTTTTCAACTACAAACCGGGCGCACACAACGTGCTGGCCGTGGACGCGGCGACGTACAGGAGCTGCAAGGTGGGCAGCTCGGCGGACTCGGTGGCGGCGGCGACGGGGACCGCGTCGTTCCTCCTCAAGAAGGGCGTCAACTANTACATTTGCGGCGTCCCCGGCCACTGCGCCGCCGGGATGAAACTCCGGGTCGTCGCCGACTGATGAAACTCCGGCGACAGATCAATCCCTTAATTAATTAAAACTATGTGGGTGTCTCTGCAGCCTGAAGCAGCATATAGCTTGCTCGGTTTAGGGATTGGTCGCGTATATATAGTTGTAATTGTAGCCCTATGTACTGGAGTGGCTGACACTGGGTCTGTCATGCTCCTGCATCTGCATGCGTGCATGGCTGCATGCTATATATCAGCTTTGTGCGTTTTAAATAATGGCCCGAATGTGCACCTGTGTGGCTGTGTGGC TGTTTGTTGGAACTTGGAAGTACTTATATATAATATATAGTTCCCTTCTAAAAAAAAA                                                                          ]
[-] EMBL CF291318             [                                                                                                                                                                                                                                                                        TGAAACTCCGGCGACAGATCAATCCCTTAATTAATTAAAACTATGTGGGTGTTTTTGCAGCCTGAAGCAGCATATAGCTTGCTCGGTTTAGGGATTGGTCGCGTATATATAGTTGTAATTGTAGCCCTATGTACTGGAGTGGCTGACACTGGGTTTGTCATGCTCCTGCATTTGCATGGGTGCATGGCTGCATGCTATATATCAGCTTTGTGCGTTTTAAATAATGGCCCGAATGTGCGCCTGTGTGGCTGTGTGGC TGTTTGTTGGAACTTGGAAGTACTTATATATAATACATAGTTCCCTTTTATGGATGGAGATTCCCAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACTGTCATGCCGTTATGTAGCGTATC]




>consensus_14057#0
GAGCTGCAGGAATTCGGCACGAGTGATGGAAAGGTCTTCGCTGCTGGTGACACTCTTGTT
TTCAACTGCGAACCGGGCGCACACAACGTGCTGGCCGTGGACGCGGCGACGTACAGGAGC
TGCAAGGTGGGCAGCTCGGCGGACTCGGTGGCGGCGGCGACGGGGACCGCGTCGTTCCTC
CTCAAGAAGGGCGTCAACTACTACATCTGCGGCGTCCCCGGCCACTGCGCCGCCGGGATG
AAACTCCGGGTCGTCGCCAACTGATGAAACTCCGGCGACAGATCAATCCCTTAATTAATT
AAAACTATGTGGGTGTCTCTGCAGCCTGAAGCAGCATATAGCTTGCTCGGTTTAGGGATT
GGTCGCGTATATATAGTTGTAATTGTAGCCCTATGTACTGGAGTGGCTGACACTGGGTCT
GTCATGCTCCTGCATCTGCATGCGTGCATGGCTGCATGCTATATATCAGCTTTGTGCGTT
TTAAATAATGGCCCGAATGTGCACCTGTGTGGCTGTGTGGCTGTTTGTTGGAACTTGGAA
GTACTTATATATAATATATAGTTCCCTTCTATGGAAAAAGATTCCCAAAATAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAACACTGTCATGCCGTTATGTAGCGTATC

consensusID : consensus_14057#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 580
fasta sequence

                              [GAGTAGAAAGCATGCACATTCAGATAGATCATATCAGACAAGTAAATCTAGCTTGCTGTAAACACAGTTAGTTCGTAATTATCGCATAGGGCCATGGGGAAGTACAGTGTGGGTCTCGTGGTTTTAGGGTTGCTGGCCCTTGCGTTTTCGACCACTGTGCTGGCTGAAACACATGTTGTTGGTGACTCCAACGGTTGGGACTTCTCTGTGTCGTTTGATAGCTGGGCTGATGGAAAGGTCTTCGCTGCTGGTGACACTCTTGTTTTCAACTACAAACCGGGCGCACACAACGTGCTGGCCGTGGACGCGGCGACGTACAGGAGCTGCAAGGTGGGCAGCTCGGCGGACTCGGTGGCGGCGGCGACGGGGACCGCGTCGTTCCTCCTCAAGAAGGGCGTCAACTACTACATCTGCGGCGTCCCCGGCCACTGCGCCGCCGGGATGAAACTCC-G-GGTCGTCGCCAACTGATGAAACTCCGGCGACAGATCAATCCCTTAATTAATTAAAACTATGT--GGGTGTCTCTGCAGCCTGAAGCAGCATATAGCTTGCTCGGTTTAGGGATTGGTCGCGTATATATAG]

[+] EMBL CF291296             [GAGTAGAAAGCATGCACATTCAGATAGATCATATCAGACAAGTAAATCTAGCTTGCTGTAAACACAGTTAGTTCGTAATTATCGCATAGGGCCATGGGGAAGTACAGTGTGGGTCTCGTGGTTTTAGGGTTGCTGGCCCTTGCGTTTTCGACCACTGTGCTGGCTGAAACACATGTTGTTGGTGACTCCAACGGTTGGGACTTCTCTGTGTCGTTTGATAGCTGGGCTGATGGAAAGGTCTTCGCTGCTGGTGACACTCTTGTTTTCAACTACAAACCGGGCGCACACAACGTGCTGGCCGTGGACGCGGCGACGTACAGGAGCTGCAAGGTGGGCAGCTCGGCGGACTCGGTGGCGGCGGCGACGGNGACCGCGTCGTTCCTCCTCAAGAAGGGCGTCAACTACTACATCTGCGGCGTCCCCGGCCACTGCGCCGCCGGGATGAAACTCC G GGTCGTCGCCAACTGATGAAACTCCGGCGACAGATCAATCCCTTAATTAATTAAAACTATGT  GGGTGTCTC                                                         ]
[+] EMBL CF291528             [                  TTCAGATAGATCATATCAGACAAGTAAATCTAGCTTGCTGTAAACACAGTTAGTTCGTAATTATCGCATAGGGCCATGGGGAAGTACAGTGTGGGTCTCGTGGTTTTAGGGTTGCTGGCCCTTGCGTTTTCGACCACTGTGCTGGCTGAAACACATGTTGTTGGTGACTCCAACGGTTGGGACTTCTCTGTGTCGTTTGATAGCTGGGCTGATGGAAAGGTCTTCGCTGCTGGTGACACTCTTGTTTTCAACTACAAACCGGGCGCACACAACGTGCTGGCCGTGGACGCGGCGACGTACAGGAGCTGCAAGGTGGGCAGCTCGGCGGACTCGGTGGCGGCGGCGACGGGGACCGCGTCGTTCCTCCTCAAGAAGGGCGTCAACTACTACATCTGCGGCGTCCCCGGCCACTGCGCCGCCGGGATGAAACTCC GNGGTCGTCGCCAACTGATGAAACTCCGGCGACAGATCAATCCCTTAATTAATTAAAACTATGTTGGGGTGTCTCTGCAGCCTGAAGCAGCATATAGC                                  ]
[+] EMBL CF291096             [                   TCAGATAGATCATATCAGACAAGTAAATCTAGCTTGCTGTAAACACAGTTAGTTCGTAATTATCGCATAGGGCCATGGGGAAGTACAGTGTGGGTCTCGTGGTTTTAGGGTTGCTGGCCCTTGCGTTTTCGACCACTGTGCTGGCTGAAACACATGTTGTTGGTGACTCCAACGGTTGGGACTTCTCTGTGTCGTTTGATAGCTGGGCTGATGGAAAGGTCTTCGCTGCTGGTGACACTCTTGTTTTCAACTACAAACCGGGCGCACACAACGTGCTGGCCGTGGACGCGGCGACGTACAGGAGCTGCAAGGTGGGCAGCTCGGCGGACTCGGTGGCGGCGGCGACGGGGACCGCGTCGTTCCTCCTCAAGAAGGGCGTCAACTACTACATCTGCGGCGTCCCCGGCCACTGCGCCGCCGGGATGAAACTCC G GGTCGTCGCCAACTGATGAAACTCCGGCGACAGATCAATCCCTTAATTAATTAAAACTATGT  GGGTGTCTCTGCAGCCTGAAGCAGCATATAGCTTGCTCGGTTTAGGGATTGGTCGCGTATATATAG]
[+] EMBL CF291442             [                   TCAGATAGATCATATCAGACAAGTAAATCTAGCTTGCTGTAAACACAGTTAGTTCGTAATTATCGCATAGGGCCATGGGGAAGTACAGTGTGGGTCTCGTGGTTTTAGGGTTGCTGGCCCTTGCGTTTTCGACCACTGTGCTGGCTGAAACACATGTTGTTGGTGACTCCAACGGTTGGGACTTCTCTGTGTCGTTTGATAGCTGGGCTGATGGAAAGGTCTTCGCTGCTGGTGACACTCTTGTTTTCAACTACAAACCGGGCGCACACAACGTGCTGGCCGTGGACGCGGCGACGTACAGGAGCTGCAAGGTGGGCAGCTCGGCGGACTCGGTGGCGGCGGCGACGGGGACCGCGTCGTTCCTCCTCAAGAAGGGCGTCAACTACTACATCTGCGGCGTCCCCGGCCACTGCGCCGCCGGGATGAAACTCC G GGTCGTCG                                                                                                                          ]
[+] EMBL CF291319             [                     AGATAGATCATATCAGACAAGTAAATCCAGCTTGCTGTAAACACAGTTAGTTCGTAATTATCGCATAGGGCCATGGGGAAGTACAGTGTGGGTCTCGTGGTTTTAGGGTTGCTGGCCCTTGCGTTTTCGACCACTGTGCTGGCTGAAACACATGTTGTTGGTGACTCCAACGGTTGGGACTTCTCTGTGTCGTTTGATAGCTGGGCTGATGGAAAGGTCTTCGCTGCTGGTGACACTCTTGTTTTCAACTACAAACCGGGCGCACACAACGTGCTGGCCGTGGACGCGGCGACGTACAGGAGCTGCAAGGTGGGCAGCTCGGCGGACTCGGTGGCGGCGGCGACGGGGACCGCGTCGTTCCTCCTCAAGAAGGGCGTCAACCACTACATCTGCGGCGTCCCCGGCCACTGCGCCGCCGGGATGAAACTCC G GGTCGTCGCCAACTGATGAAACTCCGGCGACAGATCAATCCCTTAATTAATTAAAACTATGT  GGGTGTCTC                                                         ]
[+] EMBL CF291468             [                       ATAGATCATATCAGACAAGTAAATCTAGCTTGCTGTAAACACAGTTAGTTCGTAATTATCGCATAGGGCCATGGGGAAGTACAGTGTGGGTCTCGTGGTTTTAGGGTTGCTGGCCCTTGCGTTTTCGACCACTGTGCTGGCTGAAACACATGTTGTTGGTGACTCCAACGGTTGGGACTTCTCTGTGTCGTTTGATAGCTGGGCTGATGGAAAGGTCTTCGCTGCTGGTGACACTCTTGTTTTCAACTACAAACCGGGCGCACACAACGTGCTGGCCGTGGACGCGGCGACGTACAGGAGCTGCAAGGTGGGCAGCTCGGCGGACTCGGTGGCGGCGGCGACGGGGACCGCGTCGTTCCTCCTCAAGAAGGGCGTCAACTACTACATCTGCGGCGTCCCCGGCCACTGCGCCGCCGGGATGAAACTCCGG GGTCGTCGCCAACTGATGAAACTCCGGCGACAGATCAATCCCTTAATTAATTAAAACTATGTG GGGTGTCTCTGCAGCCTGAAGCAGCATAT                                     ]




>consensus_14057#1
GAGTAGAAAGCATGCACATTCAGATAGATCATATCAGACAAGTAAATCTAGCTTGCTGTA
AACACAGTTAGTTCGTAATTATCGCATAGGGCCATGGGGAAGTACAGTGTGGGTCTCGTG
GTTTTAGGGTTGCTGGCCCTTGCGTTTTCGACCACTGTGCTGGCTGAAACACATGTTGTT
GGTGACTCCAACGGTTGGGACTTCTCTGTGTCGTTTGATAGCTGGGCTGATGGAAAGGTC
TTCGCTGCTGGTGACACTCTTGTTTTCAACTACAAACCGGGCGCACACAACGTGCTGGCC
GTGGACGCGGCGACGTACAGGAGCTGCAAGGTGGGCAGCTCGGCGGACTCGGTGGCGGCG
GCGACGGGGACCGCGTCGTTCCTCCTCAAGAAGGGCGTCAACTACTACATCTGCGGCGTC
CCCGGCCACTGCGCCGCCGGGATGAAACTCCGGGTCGTCGCCAACTGATGAAACTCCGGC
GACAGATCAATCCCTTAATTAATTAAAACTATGTGGGTGTCTCTGCAGCCTGAAGCAGCA
TATAGCTTGCTCGGTTTAGGGATTGGTCGCGTATATATAG

consensusID : consensus_14057#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 561
fasta sequence

                              [AAATCTAGCTTGCTGTAAACACAGTTAGTTCGTAATTATCGCATAGGGCCATGGGGAAGTACAGTGTGGGTCTCGTGGTTTTAGGGTTGCTGGCCCTTGCGTTTTCGACCACTGTGCTGGCTGAAACACATGTTGTTGGTGACTCCAACGGTTGGGACTTCTCTGTGTCGTTTGATAGCTGGGCTGATGGAAAGGTCTTCGCTGCTGGTGACACTCTTGTTTTCAACTACAAACCGGGCGCACACAACGTGCTGGCCGTGGACGCGGCGACGTACAGGAGCTGCAAGGTGGGCAGCTCGGCGGACTCGGTGGGCGGCGGCGACGGGGGACCGGGTCGTTCCTCCTCAAGAAGGGGGTCAACTACTACCTCTGGGGCGTCCCCGGCACTGGGCCCCCCGGATGAAACTCCGGGCCGCCCCCCACTGATGAAATTCCCGCGAAGGAACCATCCCCTAATTATTTAAACTTTTTGGGGGGCTCTTGCCCCCTGAAACACAAAAAACTGGGCCGGTTTAGGGATTGGGCCCTATATTTTGGGGAATTTGGCCCCTTTTCCGGGGG]

[+] EMBL CA753835             [AAATCTAGCTTGCTGTAAACACAGTTAGTTCGTAATTATCGCATAGGGCCATGGGGAAGTACAGTGTGGGTCTCGTGGTTTTAGGGTTGCTGGCCCTTGCGTTTTCGACCACTGTGCTGGCTGAAACACATGTTGTTGGTGACTCCAACGGTTGGGACTTCTCTGTGTCGTTTGATAGCTGGGCTGATGGAAAGGTCTTCGCTGCTGGTGACACTCTTGTTTTCAACTACAAACCGGGCGCACACAACGTGCTGGCCGTGGACGCGGCGACGTACAGGAGCTGCAAGGTGGGCAGCTCGGCGGACTCGGTGGGCGGCGGCGACGGGGGACCGGGTCGTTCCTCCTCAAGAAGGGGGTCAACTACTACCTCTGGGGCGTCCCCGGCACTGGGCCCCCCGGATGAAACTCCGGGCCGCCCCCCACTGATGAAATTCCCGCGAAGGAACCATCCCCTAATTATTTAAACTTTTTGGGGGGCTCTTGCCCCCTGAAACACAAAAAACTGGGCCGGTTTAGGGATTGGGCCCTATATTTTGGGGAATTTGGCCCCTTTTCCGGGGG]
[+] EMBL CA754813             [AAATCTAGCTTGCTGTAAACACAGTTAGTTCGTAATTATCGCATAGGGCCATGGGGAAGTACAGTGTGGGTCTCGTGGTTTTAGGGTTGCTGGCCCTTGCGTTTTCGACCACTGTGCTGGCTGAAACACATGTTGTTGGTGACTCCNACGGTTGGGACTTCTCTGTGTCGTTTGATAGCTGGGCTGATGGAAAG                                                                                                                                                                                                                                                                                                                                                                               ]




>consensus_14057#2
AAATCTAGCTTGCTGTAAACACAGTTAGTTCGTAATTATCGCATAGGGCCATGGGGAAGT
ACAGTGTGGGTCTCGTGGTTTTAGGGTTGCTGGCCCTTGCGTTTTCGACCACTGTGCTGG
CTGAAACACATGTTGTTGGTGACTCCAACGGTTGGGACTTCTCTGTGTCGTTTGATAGCT
GGGCTGATGGAAAGGTCTTCGCTGCTGGTGACACTCTTGTTTTCAACTACAAACCGGGCG
CACACAACGTGCTGGCCGTGGACGCGGCGACGTACAGGAGCTGCAAGGTGGGCAGCTCGG
CGGACTCGGTGGGCGGCGGCGACGGGGGACCGGGTCGTTCCTCCTCAAGAAGGGGGTCAA
CTACTACCTCTGGGGCGTCCCCGGCACTGGGCCCCCCGGATGAAACTCCGGGCCGCCCCC
CACTGATGAAATTCCCGCGAAGGAACCATCCCCTAATTATTTAAACTTTTTGGGGGGCTC
TTGCCCCCTGAAACACAAAAAACTGGGCCGGTTTAGGGATTGGGCCCTATATTTTGGGGA
ATTTGGCCCCTTTTCCGGGGG

consensusID : consensus_14057#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 415
fasta sequence

                              [TTATTACATTTGGGGGGTCCCCGGCCCTTGCGCCCCCGGGATGAAACTCCGGGTTGTCGCCAATTGATGAAACTCCGGGGACAGATCAATCCCTTAATTAATTAAAACTATGTGGGTGTTTTTGCACCCTGAACCAGCATATAGCTTGCTCGGTTTAGGGATTGGTCGGGTATAAATAGTTGTAATTGTACCCCTATGTATTGGAGGGGGTGCCACTGGGTTTGTCATGCTCCTGCATTTGCAGGGGGGCATGGCTGCATGTTATATATCAGCTTTGGGGGTTTTAAATAATGGCCCGAATGTGCCCCTGTGGGGCTGTGTGGCTGTTTGTTGGAACTTGGAAGTACTTATATATAAAATATGGTTCCCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CF291095             [TTATTACATTTGGGGGGTCCCCGGCCCTTGCGCCCCCGGGATGAAACTCCGGGTTGTCGCCAATTGATGAAACTCCGGGGACAGATCAATCCCTTAATTAATTAAAACTATGTGGGTGTTTTTGCACCCTGAACCAGCATATAGCTTGCTCGGTTTAGGGATTGGTCGGGTATAAATAGTTGTAATTGTACCCCTATGTATTGGAGGGGGTGCCACTGGGTTTGTCATGCTCCTGCATTTGCAGGGGGGCATGGCTGCATGTTATATATCAGCTTTGGGGGTTTTAAATAATGGCCCGAATGTGCCCCTGTGGGGCTGTGTGGCTGTTTGTTGGAACTTGGAAGTACTTATATATAAAATATGGTTCCCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_14057#3
TTATTACATTTGGGGGGTCCCCGGCCCTTGCGCCCCCGGGATGAAACTCCGGGTTGTCGC
CAATTGATGAAACTCCGGGGACAGATCAATCCCTTAATTAATTAAAACTATGTGGGTGTT
TTTGCACCCTGAACCAGCATATAGCTTGCTCGGTTTAGGGATTGGTCGGGTATAAATAGT
TGTAATTGTACCCCTATGTATTGGAGGGGGTGCCACTGGGTTTGTCATGCTCCTGCATTT
GCAGGGGGGCATGGCTGCATGTTATATATCAGCTTTGGGGGTTTTAAATAATGGCCCGAA
TGTGCCCCTGTGGGGCTGTGTGGCTGTTTGTTGGAACTTGGAAGTACTTATATATAAAAT
ATGGTTCCCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_14057#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 396
fasta sequence

                              [CGACCTCAAGAAGGGCGTCAACTACTTCATCTGCGGCGTCCCAGGCCACTGCGCCACCGGGATGAAGCTCCGTGTCGTCGCCAACTAATATTTATTAACGTAATTCCCCTTTGCAGAGACCAAATAAATATGCACCCACCGGCCTTACTTTGTTCAGGGGATTAATATGTATCCGTGTTTCTGAGTGTGTATTGCTAGTAGTCTTCATCAGCTGCATGCTGCAATGCGCCTACTACGGTCCTAGCTCCTAATAATTTCTGGGTTTCTAGATATACTAAGCCCCTAATAAGCAACTTGGCTATCAACAGGGACGTGTCCTTCTGGTTATTTAAAAACAGGTCTATACTATACAATAAATATTCTCCATTTAAAAAAAAAAAAAAACTTGAGGGGGGG]

[+] EMBL BE040849             [CGACCTCAAGAAGGGCGTCAACTACTTCATCTGCGGCGTCCCAGGCCACTGCGCCACCGGGATGAAGCTCCGTGTCGTCGCCAACTAATATTTATTAACGTAATTCCCCTTTGCAGAGACCAAATAAATATGCACCCACCGGCCTTACTTTGTTCAGGGGATTAATATGTATCCGTGTTTCTGAGTGTGTATTGCTAGTAGTCTTCATCAGCTGCATGCTGCAATGCGCCTACTACGGTCCTAGCTCCTAATAATTTCTGGGTTTCTAGATATACTAAGCCCCTAATAAGCAACTTGGCTATCAACAGGGACGTGTCCTTCTGGTTATTTAAAAACAGGTCTATACTATACAATAAATATTCTCCATTTAAAAAAAAAAAAAAACTTGAGGGGGGG]




>consensus_14057#4
CGACCTCAAGAAGGGCGTCAACTACTTCATCTGCGGCGTCCCAGGCCACTGCGCCACCGG
GATGAAGCTCCGTGTCGTCGCCAACTAATATTTATTAACGTAATTCCCCTTTGCAGAGAC
CAAATAAATATGCACCCACCGGCCTTACTTTGTTCAGGGGATTAATATGTATCCGTGTTT
CTGAGTGTGTATTGCTAGTAGTCTTCATCAGCTGCATGCTGCAATGCGCCTACTACGGTC
CTAGCTCCTAATAATTTCTGGGTTTCTAGATATACTAAGCCCCTAATAAGCAACTTGGCT
ATCAACAGGGACGTGTCCTTCTGGTTATTTAAAAACAGGTCTATACTATACAATAAATAT
TCTCCATTTAAAAAAAAAAAAAAACTTGAGGGGGGG

consensusID : consensus_14057#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 380
fasta sequence

                              [ATCAATCCCTTAATTAATTAAAACTATGTGGGGGTTTTTGCAGCCTTAAACAGCAAAAAGCTTGCTCGGTTTAGGGATTGGTCGGGGAAAAAAAGTTGGAATTGTAGCCCCATGTACTGGAGTGGGTGACCCTGGGTTTGTCAAGGTCCTGCATTTGCAAGGGGGCAAGGGTGCATGTTAAAAATCAGCTTTGTGGGTTTTAAAAAAAGGCCCCAATGTGCCCCTGTGTGGCTGTGTGGCTGTTTGTTGGAACTTGGAAGGACTTAAAAATAAAAAAAAGTTCCCCTTTATGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTGTCATGCCGTTACCGTAGCGTATCGTGACAG]

[-] EMBL CF291295             [ATCAATCCCTTAATTAATTAAAACTATGTGGGGGTTTTTGCAGCCTTAAACAGCAAAAAGCTTGCTCGGTTTAGGGATTGGTCGGGGAAAAAAAGTTGGAATTGTAGCCCCATGTACTGGAGTGGGTGACCCTGGGTTTGTCAAGGTCCTGCATTTGCAAGGGGGCAAGGGTGCATGTTAAAAATCAGCTTTGTGGGTTTTAAAAAAAGGCCCCAATGTGCCCCTGTGTGGCTGTGTGGCTGTTTGTTGGAACTTGGAAGGACTTAAAAATAAAAAAAAGTTCCCCTTTATGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTGTCATGCCGTTACCGTAGCGTATCGTGACAG]




>consensus_14057#5
ATCAATCCCTTAATTAATTAAAACTATGTGGGGGTTTTTGCAGCCTTAAACAGCAAAAAG
CTTGCTCGGTTTAGGGATTGGTCGGGGAAAAAAAGTTGGAATTGTAGCCCCATGTACTGG
AGTGGGTGACCCTGGGTTTGTCAAGGTCCTGCATTTGCAAGGGGGCAAGGGTGCATGTTA
AAAATCAGCTTTGTGGGTTTTAAAAAAAGGCCCCAATGTGCCCCTGTGTGGCTGTGTGGC
TGTTTGTTGGAACTTGGAAGGACTTAAAAATAAAAAAAAGTTCCCCTTTATGGGAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTGTCATGCCGTT
ACCGTAGCGTATCGTGACAG

consensusID : consensus_14057#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 358
fasta sequence

                              [CAATCCCTTAATTAATTAAAAATATGGGGGGGTTTTTGCAGCCTAAAACAGCAAAAAGCTTGTTCGGTTTAGGGATTGGTGGGGTAAAAAAAGTTGTAATTGGAGCCCTATGTTTTGGAGGGGGTGACCCTGGGTTTGTTAAGTTCCTGCATTTGCAAGGGGGCAAGGGTGCATTTTATAAAACAGCTTTGGGGGTTTTAAAAAAAGGCCCAAATGGGCCCCTGTGGGGCTGTGGGGCTTTTTTTTGGAACTTGGAAGGATTTATAAATAAAAAAAAGTTCCCTTTTAGGGAGGGGGATTCCCAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CF291467             [CAATCCCTTAATTAATTAAAAATATGGGGGGGTTTTTGCAGCCTAAAACAGCAAAAAGCTTGTTCGGTTTAGGGATTGGTGGGGTAAAAAAAGTTGTAATTGGAGCCCTATGTTTTGGAGGGGGTGACCCTGGGTTTGTTAAGTTCCTGCATTTGCAAGGGGGCAAGGGTGCATTTTATAAAACAGCTTTGGGGGTTTTAAAAAAAGGCCCAAATGGGCCCCTGTGGGGCTGTGGGGCTTTTTTTTGGAACTTGGAAGGATTTATAAATAAAAAAAAGTTCCCTTTTAGGGAGGGGGATTCCCAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_14057#6
CAATCCCTTAATTAATTAAAAATATGGGGGGGTTTTTGCAGCCTAAAACAGCAAAAAGCT
TGTTCGGTTTAGGGATTGGTGGGGTAAAAAAAGTTGTAATTGGAGCCCTATGTTTTGGAG
GGGGTGACCCTGGGTTTGTTAAGTTCCTGCATTTGCAAGGGGGCAAGGGTGCATTTTATA
AAACAGCTTTGGGGGTTTTAAAAAAAGGCCCAAATGGGCCCCTGTGGGGCTGTGGGGCTT
TTTTTTGGAACTTGGAAGGATTTATAAATAAAAAAAAGTTCCCTTTTAGGGAGGGGGATT
CCCAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14057#1      ------------------------------------------------------------
consensus_14057#2      ------------------------------------------------------------
consensus_14057#5      ------------------------------------------------------------
consensus_14057#6      ------------------------------------------------------------
consensus_14057#3      ------------------------------------------------------------
consensus_14057#0      GAGCTGCAGGAATTCGGCACGAGTGATGGAAAGGTCTTCGCTGCTGGTGACACTCTTGTT 60
consensus_14057#4      ------------------------------------------------------------
                                                                                   

consensus_14057#1      ------------------------------------------------------GAGTAG 6
consensus_14057#2      ------------------------------------------------------------
consensus_14057#5      ------------------------------------------------------------
consensus_14057#6      ------------------------------------------------------------
consensus_14057#3      ------------------------------------------------------------
consensus_14057#0      TTCAACTGCGAACCGGGCGCACACAACGTGCTGGCCGTGGACGCGGCGACGTACAGGAGC 120
consensus_14057#4      ------------------------------------------------------------
                                                                                   

consensus_14057#1      AAAGCATGCACATTCAGATAGATCATATCAGACAAGTAAATCTAGCTTGCTGTAAACACA 66
consensus_14057#2      -------------------------------------AAATCTAGCTTGCTGTAAACACA 23
consensus_14057#5      ------------------------------------------------------------
consensus_14057#6      ------------------------------------------------------------
consensus_14057#3      ------------------------------------------------------------
consensus_14057#0      TGCAAGGTGGGCAGCTCGGCGGACTCGGTGGCGGCGGCGACGGGGACCGCGTCGTTCCTC 180
consensus_14057#4      ------------------------------------------------------------
                                                                                   

consensus_14057#1      GTTAGTTCGTAATTATCGCATAGGGCCATGGGGAAGTACAGTGTGGGTCTCGTGGTTTTA 126
consensus_14057#2      GTTAGTTCGTAATTATCGCATAGGGCCATGGGGAAGTACAGTGTGGGTCTCGTGGTTTTA 83
consensus_14057#5      ------------------------------------------------------------
consensus_14057#6      ------------------------------------------------------------
consensus_14057#3      -----------------TTATTACATTTGGGGGGTCCCCGGCCCTTGCGCCCCCGGGATG 43
consensus_14057#0      CTCAAGAAGGGCGTCAACTACTACATCTGCGGCGTCCCCGGCCACTGCGCCGCCGGGATG 240
consensus_14057#4      --------------------------------CGACCTCAAGAAGGGCGTCAACTACTTC 28
                                                                                   

consensus_14057#1      GGGTTGCTGGCCCTTGCGTTTTCGACCACTGTGCTGGCTGAAACAC-ATGTTGTTGGTGA 185
consensus_14057#2      GGGTTGCTGGCCCTTGCGTTTTCGACCACTGTGCTGGCTGAAACAC-ATGTTGTTGGTGA 142
consensus_14057#5      -----------------------------------------ATCA--ATCCCTTAATTAA 17
consensus_14057#6      -------------------------------------------CA--ATCCCTTAATTAA 15
consensus_14057#3      AAACTCCGGGTTGTCGCCAATTGATGAAACTCCGGGGACAGATCA--ATCCCTTAATTAA 101
consensus_14057#0      AAACTCCGGGTCGTCGCCAACTGATGAAACTCCGGCGACAGATCA--ATCCCTTAATTAA 298
consensus_14057#4      ATCTGCGGCGTCCCAGGCCACTGCGCCACCG----GGATGAAGCTCCGTGTCGTCGCCAA 84
                                                                  *    *    *     *

consensus_14057#1      CTCCAACGGTTGGGACTTCTCTGTGTCGTTTGATAGCTGGGCTGATGGAAAGGTCTTCGC 245
consensus_14057#2      CTCCAACGGTTGGGACTTCTCTGTGTCGTTTGATAGCTGGGCTGATGGAAAGGTCTTCGC 202
consensus_14057#5      TTAAAACTATGTGGGGGTTTTTGCAGCCTTAAACAGC-AAAAAGCTTGCTCGGT-TTAGG 75
consensus_14057#6      TTAAAAATATGGGGGGGTTTTTGCAGCCTAAAACAGC-AAAAAGCTTGTTCGGT-TTAGG 73
consensus_14057#3      TTAAAACTATGTGGGTGTTTTTGCACCCTGAACCAGC-ATATAGCTTGCTCGGT-TTAGG 159
consensus_14057#0      TTAAAACTATGTGGGTGTCTCTGCAGCCTGAAGCAGC-ATATAGCTTGCTCGGT-TTAGG 356
consensus_14057#4      CTAATATT-TATTAACGTAATTCCCCTTTGCAGAGAC----CAAATAAATATGCACCCAC 139
                        *   *   *       *   *      *       *        *      *       

consensus_14057#1      TGCTGGT--GACACTCTTGTTTTCAAC-TACAAACCGGGCGCACACAACGTGCTGGCCGT 302
consensus_14057#2      TGCTGGT--GACACTCTTGTTTTCAAC-TACAAACCGGGCGCACACAACGTGCTGGCCGT 259
consensus_14057#5      GATTGGTCGGGGAAAAAAAGTTGGAAT-TGTAGCCCCA-TGTACTGGAGTGGGTGACCCT 133
consensus_14057#6      GATTGGTGGGGTAAAAAAAGTTGTAAT-TGGAGCCCTA-TGTTTTGGAGGGGGTGACCCT 131
consensus_14057#3      GATTGGTCGGGTATAAATAGTTGTAAT-TGTACCCCTA-TGTATTGGAGGGGGTGCCACT 217
consensus_14057#0      GATTGGTCGCGTATATATAGTTGTAAT-TGTAGCCCTA-TGTACTGGAGTGGCTGACACT 414
consensus_14057#4      CGGCCTTACTTTGTTCAGGGGATTAATATGTATCCGTGTTTCTGAGTGTGTATTGCTAGT 199
                             *                 **  *  *  *                  **    *

consensus_14057#1      GGACGCGGCGACGTACAGGAGCTGCAAGGTGGGCAGCTCGGCGGACTCGGTGG-CGGCGG 361
consensus_14057#2      GGACGCGGCGACGTACAGGAGCTGCAAGGTGGGCAGCTCGGCGGACTCGGTGGGCGGCGG 319
consensus_14057#5      GGGTTTGTCAAGGTCCTGCATTTGCAAGG-GGGCAAG--GGTGCATGTTAAAA--ATCAG 188
consensus_14057#6      GGGTTTGTTAAGTTCCTGCATTTGCAAGG-GGGCAAG--GGTGCATTTTATAA--AACAG 186
consensus_14057#3      GGGTTTGTCATGCTCCTGCATTTGCAGGG-GGGCATG--GCTGCATGTTATAT--ATCAG 272
consensus_14057#0      GGGTCTGTCATGCTCCTGCATCTGCATGC-GTGCATG--GCTGCATGCTATAT--ATCAG 469
consensus_14057#4      AGTCTTCATCAGCTGCATG--CTGCAATGCGCCTACT---ACGGTCCTAGCTCCTAATAA 254
                        *           * *      ****    *   *       *                 

consensus_14057#1      CGACGGGG-ACCGCGTCGTTCCTCCTCAAGAAGGGCGTCAACTACTACATCTGCGGCGTC 420
consensus_14057#2      CGACGGGGGACCGGGTCGTTCCTCCTCAAGAAGGGGGTCAACTACTACCTCTGGGGCGTC 379
consensus_14057#5      CTTTGTGG---------GTT-----TTAAAAAAAGGCCCCAATG-TGCCCCTGTGTGGCT 233
consensus_14057#6      CTTTGGGG---------GTT-----TTAAAAAAAGGCCCAAATG-GGCCCCTGTGGGGCT 231
consensus_14057#3      CTTTGGGG---------GTT-----TTAAATAATGGCCCGAATG-TGCCCCTGTGGGGCT 317
consensus_14057#0      CTTTGTGC---------GTT-----TTAAATAATGGCCCGAATG-TGCACCTGTGTGGCT 514
consensus_14057#4      TTTCTGGG----------TTTCTAGATATACTAAGCCCCTAATA-AGCAACTTGGCTATC 303
                             *           **       *      *   * * *    *  **  *     

consensus_14057#1      CCCGGCCACTGCGCCGCCGGGATGA---AACTCCGGGTCGTCGCCAACTGATGAAA--CT 475
consensus_14057#2      CCCGGC-ACTGGGCCCCCCGGATGA---AACTCCGGGCCGCCCCCCACTGATGAAA--TT 433
consensus_14057#5      G--------TGTGGCTGTTTGTTGG---AACTTGGAAGGACTTAAAAATAAAAAAAAGTT 282
consensus_14057#6      G--------TGGGGCTTTTTTTTGG---AACTTGGAAGGATTTATAAATAAAAAAAAGTT 280
consensus_14057#3      G--------TGTGGCTGTTTGTTGG---AACTTGGAAGTACTTATATATAAAATATGGTT 366
consensus_14057#0      G--------TGTGGCTGTTTGTTGG---AACTTGGAAGTACTTATATATAATATATAGTT 563
consensus_14057#4      AACAGG-GACGTGTCCTTCTGGTTATTTAAAAACAGGTCTATACTATACAATAAATATTC 362
                                 * * *       *     **                    *   *     

consensus_14057#1      CCGGCGACAGATCAATCCCTTAATTAATTAAAACTATGTGGGTGTCTCTGCAGCCTGAAG 535
consensus_14057#2      CCCGCGAAGGAACCATCCCCTAATTATTTAAACTTTTTGGGGGGCTCTTGCCCCCTGAAA 493
consensus_14057#5      CCCCTTTATGGGAAA------AAA-----AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 331
consensus_14057#6      CCCTTTTAGGGAGGG------GGATTCCCAAAATAAAAAAAAAAAAAAAAAAAAAAAAAA 334
consensus_14057#3      CCCTTCAAAAAAAAA------AAA-----AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 415
consensus_14057#0      CCCTTCTATGGAAAA------AGATTCCCAAAATAAAAAAAAAAAAAAAAAAAAAAAAAA 617
consensus_14057#4      TCCATTTAAAAAAAA------AAA-----AAAACTTGAGGGGGGG--------------- 396
                        *                           ***                            

consensus_14057#1      CAGCATATAGCTTGCTCGGTTTAGGGATTGGTCGCGTATATATAG--------------- 580
consensus_14057#2      CA-CAAAAAACTGGGCCGGTTTAGGGATTGGGCCC-TATATTTTGGGGAATTTGGCCCCT 551
consensus_14057#5      AAAAAAAAAAAAAACCCTGTCATGCCGTTACCGTAGCGTATCGTGACAG----------- 380
consensus_14057#6      AAAAAAAAAAAAAAAAAAAAAAAA------------------------------------ 358
consensus_14057#3      ------------------------------------------------------------
consensus_14057#0      AAAAAAAAACACTGTCATGCCGTTATGTAGCGTATC------------------------ 653
consensus_14057#4      ------------------------------------------------------------
                                                                                   

consensus_14057#1      ----------
consensus_14057#2      TTTCCGGGGG 561
consensus_14057#5      ----------
consensus_14057#6      ----------
consensus_14057#3      ----------
consensus_14057#0      ----------
consensus_14057#4      ----------