These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14076#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1336 fasta sequence [TCTTTTAATTTTTGGATAGGGTGATCTCTATTAAATTCAGACTAGTTCTGTCACAAATTAACAACCACATTTGTATGAGGCCTACAGTTGTGTATTCTTTTCACCAAATGCAGCACACATCATTCCCTAATACCATTCTATCACACATCTGTGCTTTCTTGTACATCATACCGTGTCGCTTCTTTCTTTTTACATTGAACAACAGTGGCCACTAATTACAGCTTCTCCTTGCTAATAAAACTCGCTGAGACTGTAGTTCAGTTCATTCCTCGGAATCGGAATCCATTGGGCATGATCCGTCATCCACGGTGGCGAGTGGATCAAACATGTGCGAGTTTGGATCCATGCACCCTGACACAATGTCCAGCTTGCAGCGATCTCCCCCCTCTTCGTAGTAGCTGCCCATCTCGCAGCTTGTGATGACAACGTTTTCGTCTGGGAAGATGGCTCTGTCGCATGCCCCTTCTCTGTTCAGTTCGTCTGCTAGACCCTCGTTGAAGAAGCTCAAGGGCTTGTTGAGCCATGGCTTGGGGACCCTGAACTTGAGGGTGTACGGTCCATCCCAATCCACCCCGTTTGTGAAGGAGAAGACGAGGGTCATGGCTGCGAGTGCAAAACCAACCAGACAAAATCTCACTCCGATGACAACATGCTATTACATACATACAGTACTAGTAACGAATCCATGGCCACTCAGATGACAACATGCTATTACATACATACAGTACTAGTAACGATCACTTGAACATATGGTGTCAGCATGATGCAAAAGCTTAATTTAAGTTAATGAGAAATTGCAGGCGAATCATTCATATCTTCAACGAAACAAAACAATCAGCTGCTGACCATGCTGCGGCACACGTATCCTGATGGTGTATATGGGAGGATCAGCTGATCCCCTCTCTTGCAGCGTCATCTGCCTCGGCTCACCACCGCACATGATCGGCTGGTTAAAACCACCATTAAACGCGATGCCAAACTGAGCGTTGGGGGTCATCTTGGTCGCTGCCGGGTTGTAGAAAAGGATCAGGCCCTCTCCAGCCGATGGAGGAAGACCGTTCATGGTCTTCCAGTAGACCGGCGCCTTGCCCAGCTCGAACTCCGCCCATGTCGGAAGCGAGCACTCGTTGGTCTGCGGCACGGCGGGCGCCGTGGCCGCGGCAGGCGCCGCGGCGGCGCCTGTGCGGACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCTTGCCGGCCGCCGGGGACGGCGCTGGACGGCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGAAGAGAGCGTGGCCATCCTACAGTATGCACT] [+] EMBL CB683824 [TCTTTTAATTTTTGGATAGGGTGATCTCTATTAAATTCAGACTAGTTCTGTCACAAATTAACAACCACATTTGTATGAGGCCTACAGTTGTGTATTCTTTTCACCAAATGCAGCACACATCATTCCCTAATACCATTCTATCACACATCTGTGCTTTCTTGTACATCATACCGTGTCGCTTCTTTCTTTTTACATTGAACAACAGTGGCCACTAATTACAGCTTCTCCTTGCTAATAAAACTCGCTGAGACTGTAGTTCAGTTCATTCCTCGGAATCGGAATCCATTGGGCATGATCCGTCATCCACGGTGGCGAGTGGATCAAACATGTGCGAGTTTGGATCCATGCACCCTGACACAATGTCCAGCTTGCAGCGATCTCCCCCCTCTTCGTAGTAGCTGCCCATCTCGCAGCTTGTGATGACAACGTTTTCGTCTGGGAAGATGGCTCTGTCGCATGCCCCTTCTCTGTTCAGTTCGTCTGCTAGACCCTCGTTGAAGAAGCTCAAGGGCTTGTTGAGCCATGGCTTGGGGACCCTGAACTTGAGGGTGTACGGTCCATCCCAATCCACCCCGTTTGTGAAGGAGAAGACGAGGGTCATGGCTGCGAGTGCAAAACCAACCAGACAAAATCTCACTCCGATGACAACATGCTATTACATACATACAGTACTAGTAACGAATCCATGGCCACTCAGATGACAACATGCTATTACATAC ] [-] EMBL CB683440 [ GTACGGTCCATCCCAATCCACCCCGTTTGTGAAGGAGAAGACGAGGGTCATGGCTGCGAGTGCAAAACCAACCAGACAAAATCTCACTCCGATGACAACATGCTATTACATACATACAGTACTAGTAACGAATCCATGGCCACTCAGATGACAACATGCTATTACATACATACAGTACTAGTAACGATCACTTGAACATATGGTGTCAGCATGATGCAAAAGCTTAATTTAAGTTAATGAGAAATTGCAGGCGAATCATTCATATCTTCAACGAAACAAAACAATCAGCTGCTGACCATGCTGCGGCACACGTATCCTGATGGTGTATATGGGAGGATCAGCTGATCCCCTCTCTTGCAGCGTCATCTGCCTCGGCTCACCACCGCACATGATCGGCTGGTTAAAACCACCATTAAACGCGATGCCAAACTGAGCGTTGGGGGTCATCTTGGTCGCTGCCGGGTTGTAGAAAAGGATCAGGCCCTCTCCAGCCGATGGAGGAAGACCGTTCATGGTCTTCCAGTAGACCGGCGCCTTGCCCAGCTCGAACTCCGCCCATGTCGGAAGCGAGCACTCGTTGGTCTGCGGCACGGCGGGCGCCGTGGCCGCGGCAGGCGCCGCGGCGGCGCCTGTGCGGACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCTTGCCGGCCGCCGGGGACGGCGCTGGACGGCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGAAGAGAGCGTGGCCATCCTACAGTATGCACT] consensusID : consensus_14076#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1254 fasta sequence [TTTTTTTTTTTTTTTGATGGTATTTGTATAGGTTGATCTCTATTAAATTCAGAGTAGTTCTGTCACAAATTAACAA-CCACATTTGTATGAGGCCTACAGTTGTGTATTCTTTTCACCAAATGCAGCACACATCATTCCCTAATACCATTCTATCACACATCTGTGCTTTCTTGTACATCATACCGTGTCGCT--TCTTTCTTTTTACATTGAACAACAGTGGCCACTAATTACAGCTTCTCCTTGCTAATAAAACTCGCTGAGACTGTAGTTCAGTTCATTCCTCGGAATCGGAATCCATTGGGCATGATCCGTCATCCACGGTGGCGAGTGGATCAAACATGTGCGAGTTTGGATCCATGCACCCTGACACAATGTCCAGCTTGCAGCGATCTCCCCCCTCTTCGTAGTAGCTGCCCATCTCGCAGCTTGTGATGACAACGTTTTCGTCTGGGAAGATGGCTCTGTCGCATGCCCCTTCTCTGTTCAGTTCGTCTGCTAGACCCTCGTTGAAGAAGCTCAAGGGCTTGTTGAGCCATGGCTTGGGGACCCTGAACTTGAGGGTGTACGGTCCATCCCAATCCACCCCGTTTGTGAAGGAGAAGACGAGGGTCATGGCATGCTGCGGCACACGTATCCTGATGGTGTATATGGGAGGATCAGCTGATCCCCTCTCTTGCAGCGTCATCTGCCTCGGCTCACCACCGCACATGATCGGCTGGTTAAAACCACCATTAAACGCGATGCCAAACTGAGCGTTGGGGGTCATCTTGGTCGCTGCCGGGTTGTAGAAAAGGATCAGGCCCTCTCCAGCCG-ATGGAGGAAGACCGTTCATGGTCTTCCAGTAGACCGGCGCCTTGCCCAGCTCGAACTCCGCCCATGTCGGAAGCGAGCACTCGTTGGTCTGCGGCACGGCGGGCGCCGTGGC-CGCGGCAGGCGCCGCGGCGGCGCCTGTGCGGACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCTTGCCGGCCGCCGGGGACGGCGCTGGACGGCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGAAGAGAGCGTGGCCATCCTACAGTCTACACTTGTGAATTGTGATAGCTGATGAAAGAAAGAGAAGAGAATCCGAAGTGAGTTTGCGAAGGAGGCATATATAAGGATGGATCATGATATTATCGTGGATGGAGAGGTGAGGTGAGGTGAGGGGCTTGGCTGCGCGTGTGTG-GTGGTGAGGT] [-] EMBL AU088664 [TTTTTTTTTTTTTTTGATGGTATTTGTATAGGTTGATCTCTATTAAATTCAGAGTAGTTCTGTCACAAATTAACAA CCACATTTGTATGAGGCCTACAGTTGTGTATTCTTTTCACCAAATGCAGCACACATCATTCCCTAATACCATTCTATCACACATCTGTGCTTTCTTGTACATCATACCGTGTCGCT TCTTTCTTTTTACATTGAACAACAGTGGCCACTAATTACAGCTTCTCCTTGCTAATAAAACTCGCTGAGACT ] [+] EMBL CB667015 [ TGTATAGGGTGATCTCTATTAAATTCAGAGTAGTTCTGTCACAAATTAACAA CCACATTTGTATGAGGCCTACAGTTGTGTATTCTTTTCACCAAATGCAGCACACATCATTCCCTAATACCATTCTATCACACATCTGTGCTTTCTTGTACATCATACCGGGTCGCT TCTTTCTTTTTACATTGAACAACAGTGGCCACTAATTACAGCTTCTCCTTGCTAATAAAACTCGCTGAGACTGGAGTTCAGTTCATTCCTCGGAATCGGAATCCATTGGGCATGATCCGTCATCCACGGGGGCGAGTGGATCAAACATGTGCGAGTTTGGATCCATGCACCCTGACACAATGTCCAGCTTGCAGCGATCTCCCCCCTCTTCGTAGTAGCTGCCCATCTCGCAGCTTGTGATGACAACGTTTTCGTCTGGGAAGATGGCTCTGTCGCATGCCCCTTCTCTGTTCAGTTCGTCTGCTAAACCCTCGTTGAAAAAGCTCAAGGGCTTGTTGAGCCATGGCTTGGGGACCCTGAACTTGAGGGTGTACGGTCCATCCCAATCCACCCCGTTTGTGAAGGAGAAGACGAGGGTCATGGCATGCTGCGGCACACGTATCCTGATGGTGTATATGGGAGGATCAGCTGATCCCCTCTCTTGCAGCGTCATCTGCCTCGGCTCACCACCGCACATGATCGGCTGGTTAAAACCACCATTAAACGCGATGCCAAACTGAGCGTTGGGGG ] [-] EMBL CA765565 [ TATAGGCTGATCACTATTAAATTCAGAGTAGTTCTGTCACAAATTANCAACCCACATTTGTATGAGGCCTACAATTGTGTATTCTTTTCACCAAATGCAGCACACATCATTCCCTAATACCATTCTATCACACATCTGTGCTTTCTTGTACATCATACCGTGTCGCTTCTCTTTCTTTTTACATTGAACAACAGTGGCCACTAATTACAGCTTCTCCTTGCTAATAAAACTCGCTGAGACTGTAGTTCAGTTCATTCCTCGGAATCGGAATCCATTGGGCATGATCCGTCATCCACGGTGGCGAGTGGATCAAACATGTGCGAGTTTGGATCCATGCACCCTGACACAATGTCCAGCTTGCAGCGATCTCCCCCCTCTTCGTAGCAGCTGCCCATCTCGCAACTTGTGATGACAACGTTTTCGTCTGGGAAGATGGCTCTGTCGCATGCCCCTTCTCTGTTCAGTTCGTCTGCTAGACCCTCGTTGAAGAAGCTCAAGGGCTTGTTGAGCCATGGCTTGGGGACCCTGAACTTGAGGGTGTACGGTCCATCCCAATCCACCCCGTTTGTGAAGGAGAAGA ] [-] EMBL AK068097 [ TAGGTTGATCTCTATTAAATTCAGAGTAGTTCTGTCACAAATTAACAA CCACATTTGTATGAGGCCTACAGTTGTGTATTCTTTTCACCAAATGCAGCACACATCATTCCCTAATACCATTCTATCACACATCTGTGCTTTCTTGTACATCATACCGTGTCGCT TCTTTCTTTTTACATTGAACAACAGTGGCCACTAATTACAGCTTCTCCTTGCTAATAAAACTCGCTGAGACTGTAGTTCAGTTCATTCCTCGGAATCGGAATCCATTGGGCATGATCCGTCATCCACGGTGGCGAGTGGATCAAACATGTGCGAGTTTGGATCCATGCACCCTGACACAATGTCCAGCTTGCAGCGATCTCCCCCCTCTTCGTAGTAGCTGCCCATCTCGCAGCTTGTGATGACAACGTTTTCGTCTGGGAAGATGGCTCTGTCGCATGCCCCTTCTCTGTTCAGTTCGTCTGCTAGACCCTCGTTGAAGAAGCTCAAGGGCTTGTTGAGCCATGGCTTGGGGACCCTGAACTTGAGGGTGTACGGTCCATCCCAATCCACCCCGTTTGTGAAGGAGAAGACGAGGGTCATGGCATGCTGCGGCACACGTATCCTGATGGTGTATATGGGAGGATCAGCTGATCCCCTCTCTTGCAGCGTCATCTGCCTCGGCTCACCACCGCACATGATCGGCTGGTTAAAACCACCATTAAACGCGATGCCAAACTGAGCGTTGGGGGTCATCTTGGTCGCTGCCGGGTTGTAGAAAAGGATCAGGCCCTCTCCAGCCG ATGGAGGAAGACCGTTCATGGTCTTCCAGTAGACCGGCGCCTTGCCCAGCTCGAACTCCGCCCATGTCGGAAGCGAGCACTCGTTGGTCTGCGGCACGGCGGGCGCCGTGGC CGCGGCAGGCGCCGCGGCGGCGCCTGTGCGGACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCTTGCCGGCCGCCGGGGACGGCGCTGGACGGCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGAAGAGAGCGTGGCCATCCTACAGTCTACACTTGTGAATTGTGATAGCTGATGAAAGAAAGAGAA ] [-] EMBL AK059901 [ ATCTCTATTAAATTCAGAGTAGTTCTGTCACAAATTAACAA CCACATTTGTATGAGGCCTACAGTTGTGTATTCTTTTCACCAAATGCAGCACACATCATTCCCTAATACCATTCTATCACACATCTGTGCTTTCTTGTACATCATACCGTGTCGCT TCTTTCTTTTTACATTGAACAACAGTGGCCACTAATTACAGCTTCTCCTTGCTAATAAAACTCGCTGAGACTGTAGTTCAGTTCATTCCTCGGAATCGGAATCCATTGGGCATGATCCGTCATCCACGGTGGCGAGTGGATCAAACATGTGCGAGTTTGGATCCATGCACCCTGACACAATGTCCAGCTTGCAGCGATCTCCCCCCTCTTCGTAGTAGCTGCCCATCTCGCAGCTTGTGATGACAACGTTTTCGTCTGGGAAGATGGCTCTGTCGCATGCCCCTTCTCTGTTCAGTTCGTCTGCTAGACCCTCGTTGAAGAAGCTCAAGGGCTTGTTGAGCCATGGCTTGGGGACCCTGAACTTGAGGGTGTACGGTCCATCCCAATCCACCCCGTTTGTGAAGGAGAAGACGAGGGTCATGGCATGCTGCGGCACACGTATCCTGATGGTGTATATGGGAGGATCAGCTGATCCCCTCTCTTGCAGCGTCATCTGCCTCGGCTCACCACCGCACATGATCGGCTGGTTAAAACCACCATTAAACGCGATGCCAAACTGAGCGTTGGGGGTCATCTTGGTCGCTGCCGGGTTGTAGAAAAGGATCAGGCCCTCTCCAGCCG ATGGAGGAAGACCGTTCATGGTCTTCCAGTAGACCGGCGCCTTGCCCAGCTCGAACTCCGCCCATGTCGGAAGCGAGCACTCGTTGGTCTGCGGCACGGCGGGCGCCGTGGC CGCGGCAGGCGCCGCGGCGGCGCCTGTGCGGACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCTTGCCGGCCGCCGGGGACGGCGCTGGACGGCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGAAGAGAGCGTGGCCATCCTACAGTCTACACTTGTGAATTGTGATAGCTGATGAAAGAA ] [-] EMBL CB657914 [ GCGAGTTTGGATCCATGCACCCTGACACAATGTCCAGCTTGCAGCGATCTCCCCCCTCTTCGTAGTAGCTGCCCATCTCGCAGCTTGTGATGACAACGTTTTCGTCTGGGAAGATGGCTCTGTCGCATGCCCCTTCTCTGTTCAGTTCGTCTGCTAGACCCTCGTTGAAGAAGCTCAAGGGCTTGTTGAGCCATGGCTTGGGGACCCTGAACTTGAGGGTGTACGGTCCATCCCAATCCACCCCGTTTGTGAAGGAGAAGACGAGGGTCATGGCATGCTGCGGCACACGTATCCTGATGGTGTATATGGGAGGATCAGCTGATCCCCTCTCTTGCAGCGTCATCTGCCTCGGCTCACCACCGCACATGATCGGCTGGTTAAAACCACCATTAAACGCGATGCCAAACTGAGCGTTGGGGGTCATCTTGGTCGCTGCCGGGTTGTAGAAAAGGATCAGGCCCTCTCCAGCCG ATGGAGGAAGACCGTTCATGGTCTTCCAGTAGACCGGCGCCTTGCCCAGCTCGAACTCCGCCCATGTCGGAAGCGAGCACTCGTTGGTCTGCGGCACGGCGGGCGCCGTGGC CGCGGCAGGCGCCGCGGCGGCGCCTGTGCGGACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCTTGCCGGCCGCCGGGGACGGCGCTGGACGGCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGAAGAGAGCGTGGCCATCCTACAGTCAAGACT ] [-] EMBL CB667014 [ CCATCTCGCAGCTTGTGATGACAACGTTTTCGTCTGGGAAGATGGCTCTGTCGCATGCCCCTTCTCTGTTCAGTTCGTCTGCTAGACCCTCGTTGAAGAAGCTCAAGGGCTTGTTGAGCCATGGCTTGGGGACCCTGAACTTGAGGGTGTACGGTCCATCCCAATCCACCCCGTTTGTGAAGGAGAAGACGAGGGTCATGGCATGCTGCGGCACACGTATCCTGATGGTGTATATGGGAGGATCAGCTGATCCCCTCTCTTGCAGCGTCATCTGCCTCGGCTCACCACCGCACATGATCGGCTGGTTAAAACCACCATTAAACGCGATGCCAAACTGAGCGTTGGGGGTCATCTTGGTCGCTGCCGGGTTGTAGAAAAGGATCAGGCCCTCTCCAGCCG ATGGAGGAAGACCGTTCATGGTCTTCCAGTAGACCGGCGCCTTGCCCAGCTCGAACTCCGCCCATGTCGGAAGCGAGCACTCGTTGGTCTGCGGCACGGCGGGCGCCGTGGC CGCGGCAGGCGCCGCGGCGGCGCCTGTGCGGACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCTTGCCGGCCGCCGGGGACGGCGCTGGACGGCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGAAGAGAGCGTGGCCATCCTACAGTC ] [-] EMBL CB657376 [ TTTTCGTCTGGGAAGATGGCTCTGTCGCATGCCCCTTCTCTGTTCAGTTCGTCTGCTAGACCCTCGTTGAAGAAGCTCAAGGGCTTGTTGAGCCATGGCTTGGGGACCCTGAACTTGAGGGTGTACGGTCCATCCCAATCCACCCCGTTTGTGAAGGAGAAGACGAGGGTCATGGCATGCTGCGGCACACGTATCCTGATGGTGTATATGGGAGGATCAGCTGATCCCCTCTCTTGCAGCGTCATCTGCCTCGGCTCACCACCGCACATGATCGGCTGGTTAAAACCACCATTAAACGCGATGCCAAACTGAGCGTTGGGGGTCATCTTGGTCGCTGCCGGGTTGTAGAAAAGGATCAGGCCCTCTCCAGCCG ATGGAGGAAGACCGTTCATGGTCTTCCAGTAGACCGGCGCCTTGCCCAGCTCGAACTCCGCCCATGTCGGAAGCGAGCACTCGTTGGTCTGCGGCACGGCGGGCGCCGTGGC CGCGGCAGGCGCCGCGGCGGCGCCTGTGCGGACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCTTGCCGGCCGCCGGGGACGGCGCTGGACGGCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGAAGAGAGCGTGGCCATCCTACAGTCTACACTTGTGAATTGTGATAGCTGATGAAAGAAAGAGAAGAGAATCCGAAGTGAGTTTGCGAAGGAGGCATATATAAGGATGGATCATGATATTATCGTGGATGGAGAGGTGAGGTGAGGTGAGGGGCTTGGCTGCGCGTGTGTG GTGGTGAGGT] [-] EMBL CA753922 [ CCCTCGTTGAAGAAGCTCAAGGGCTTGTTGAGCCATGGCTTGGGGACCCTGAACTTGAGGGTGTACGGTCCATCCCAATCCACCCCGTTTGTGAAGGAGAAGACGAGGGTCATGGCATGCTGCGGCACACGTATCCTGATGGTGTATATGGGAGGATCAGCTGATCCCCTCTCTTGCAGCGTCATCTGCCTCGGCTCACCACCGCACATGATCGGCTGGTTAAAACCACCATTAAACGCGATGCCAAACTGAGCGTTGGGGGTCATCTTGGTCGCTGCCGGGTTGTAGAAAAGGATCAGGCCCTCTCCAGCCG ATGGAGGAAGACCGTTCATGGTCTTCCAGTAGACCGGCGCCTTGCCCAGCTCGAACTCCGCCCATGTCGGAAGCGAGCACTCGTTGGTCTGCGGCACGGCGGGCGCCGTGGC CGCGGCAGGCGCCGCGGCGGCGCCTGTGCGGACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCTTGCCGGCCGCCGGGGACGGCGCTGGACGGCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGAAGAGAGCGTGGCCATCCTACAGTCTACA ] [-] EMBL CB657377 [ ATCCACCCCGTTTGTGAAGGAGAAGACGAGGGTCATGGCATGCTGCGGCACACGTATCCTGATGGTGTATATGGGAGGATCAGCTGATCCCCTCTCTTGCAGCGTCATCTGCCTCGGCTCACCACCGCACATGATCGGCTGGTTAAAACCACCATTAAACGCGATGCCAAACTGAGCGTTGGGGGTCATCTTGGTCGCTGCCGGGTTGTAGAAAAGGATCAGGCCCTCTCCAGCCG ATGGAGGAAGACCGTTCATGGTCTTCCAGTAGACCGGCGCCTTGCCCAGCTCGAACTCCGCCCATGTCGGAAGCGAGCACTCGTTGGTCTGCGGCACGGCGGGCGCCGTGGC CGCGGCAGGCGCCGCGGCGGCGCCTGTGCGGACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCTTGCCGGCCGCCGGGGACGGCGCTGGACGGCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGAAGAGAGCGTGGCCATCCTACAGTCTACACTTGTGAATTGTGATAGCTGATGAAAGAAAGAGAAGAGAATCCGAAGTGAGTTTGCGAAGGAGGCATATATAAGGATGGATCATGATATTATCGTGGATGGAGAGGTGAGGTGAGGTGAGGGGCTTGGCTGCGCGTGTGTGAGTGGTGAGGT] [+] EMBL AW069987 [ aagttcAGGGTCATGGCATGCTGCGGCACACGTATCCTGATGGTGTATATGGGAGGATCAGCTGATCCCCTCTCTTGCAGCGTCATCTGCCTCGGCTCACCACCGCACATGATCGGCTGGTTAAAACCACCATTAAACGCGATGCCAAACTGAGCGTTGGGGGT ACCTCGGc ] [-] EMBL AU088665 [ nTCTCCAGCCGNATGGAGGAAGACCGTTCATGGTCTTCCAGTAGACCGGCGCATTGCCCAGCTCGAACTCCGCCCATGTCGGAAGCGAGCACTCGTTGGTCTGCGGCACGGCGGGCGCCGTTGCGCGCNGCAGGCGCCGCGGCGGCNCCTGTGCGGACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCTTGCCGGCCGCCGGGGACGGCGCTGGAC GCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGAAGAGAGCGTGGCCATCCTACAGTCTACACTTGTGAATTG ] consensusID : consensus_14076#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 355 fasta sequence [GGTCAATTTGGTNCTTCCGGGTTTTAAAAAAGGATTAAGCCTTCTCCAACCGATGGAGGAAAACCGTTCATGGTCTTCCAGTANACCGGCGCCTTGCCCAGCTCGAACTCCGCCCATGTCGGAAACGAGCACTCGTTGGTCTGCGNGCACGGCGGGCGCNCGTTNGCCCNNGNAGCGCCGCGGCGGCGCCTGTGCGGACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCTTGCCGGCCGCCGGGGACGGCGCTGGNANGCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGAAGAGAGCGTGGCCATCCTACAGTCTACACTTGTGAATTG] [-] EMBL OSS12248A [GGTCAATTTGGTNCTTCCGGGTTTTAAAAAAGGATTAAGCCTTCTCCAACCGATGGAGGAAAACCGTTCATGGTCTTCCAGTANACCGGCGCCTTGCCCAGCTCGAACTCCGCCCATGTCGGAAACGAGCACTCGTTGGTCTGCGNGCACGGCGGGCGCNCGTTNGCCCNNGNAGCGCCGCGGCGGCGCCTGTGCGGACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCTTGCCGGCCGCCGGGGACGGCGCTGGNANGCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGAAGAGAGCGTGGCCATCCTACAGTCTACACTTGTGAATTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14076#1 TTTTTTTTTTTTTTTGATGGTATTTGTATAGGTTGATCTCTATTAAATTCAGAGTAGTTC 60 consensus_14076#2 ------------------------------------------------------------ consensus_14076#0 ------------TCTTTTAATTTTTGGATAGGGTGATCTCTATTAAATTCAGACTAGTTC 48 consensus_14076#1 TGTCACAAATTAACAACCACATTTGTATGAGGCCTACAGTTGTGTATTCTTTTCACCAAA 120 consensus_14076#2 ------------------------------------------------------------ consensus_14076#0 TGTCACAAATTAACAACCACATTTGTATGAGGCCTACAGTTGTGTATTCTTTTCACCAAA 108 consensus_14076#1 TGCAGCACACATCATTCCCTAATACCATTCTATCACACATCTGTGCTTTCTTGTACATCA 180 consensus_14076#2 ------------------------------------------------------------ consensus_14076#0 TGCAGCACACATCATTCCCTAATACCATTCTATCACACATCTGTGCTTTCTTGTACATCA 168 consensus_14076#1 TACCGTGTCGCTTCTTTCTTTTTACATTGAACAACAGTGGCCACTAATTACAGCTTCTCC 240 consensus_14076#2 ------------------------------------------------------------ consensus_14076#0 TACCGTGTCGCTTCTTTCTTTTTACATTGAACAACAGTGGCCACTAATTACAGCTTCTCC 228 consensus_14076#1 TTGCTAATAAAACTCGCTGAGACTGTAGTTCAGTTCATTCCTCGGAATCGGAATCCATTG 300 consensus_14076#2 ------------------------------------------------------------ consensus_14076#0 TTGCTAATAAAACTCGCTGAGACTGTAGTTCAGTTCATTCCTCGGAATCGGAATCCATTG 288 consensus_14076#1 GGCATGATCCGTCATCCACGGTGGCGAGTGGATCAAACATGTGCGAGTTTGGATCCATGC 360 consensus_14076#2 ------------------------------------------------------------ consensus_14076#0 GGCATGATCCGTCATCCACGGTGGCGAGTGGATCAAACATGTGCGAGTTTGGATCCATGC 348 consensus_14076#1 ACCCTGACACAATGTCCAGCTTGCAGCGATCTCCCCCCTCTTCGTAGTAGCTGCCCATCT 420 consensus_14076#2 ------------------------------------------------------------ consensus_14076#0 ACCCTGACACAATGTCCAGCTTGCAGCGATCTCCCCCCTCTTCGTAGTAGCTGCCCATCT 408 consensus_14076#1 CGCAGCTTGTGATGACAACGTTTTCGTCTGGGAAGATGGCTCTGTCGCATGCCCCTTCTC 480 consensus_14076#2 ------------------------------------------------------------ consensus_14076#0 CGCAGCTTGTGATGACAACGTTTTCGTCTGGGAAGATGGCTCTGTCGCATGCCCCTTCTC 468 consensus_14076#1 TGTTCAGTTCGTCTGCTAGACCCTCGTTGAAGAAGCTCAAGGGCTTGTTGAGCCATGGCT 540 consensus_14076#2 ------------------------------------------------------------ consensus_14076#0 TGTTCAGTTCGTCTGCTAGACCCTCGTTGAAGAAGCTCAAGGGCTTGTTGAGCCATGGCT 528 consensus_14076#1 TGGGGACCCTGAACTTGAGGGTGTACGGTCCATCCCAATCCACCCCGTTTGTGAAGGAGA 600 consensus_14076#2 ------------------------------------------------------------ consensus_14076#0 TGGGGACCCTGAACTTGAGGGTGTACGGTCCATCCCAATCCACCCCGTTTGTGAAGGAGA 588 consensus_14076#1 AGACGAGGGTCATGGC-------------------------------------------- 616 consensus_14076#2 ------------------------------------------------------------ consensus_14076#0 AGACGAGGGTCATGGCTGCGAGTGCAAAACCAACCAGACAAAATCTCACTCCGATGACAA 648 consensus_14076#1 ------------------------------------------------------------ consensus_14076#2 ------------------------------------------------------------ consensus_14076#0 CATGCTATTACATACATACAGTACTAGTAACGAATCCATGGCCACTCAGATGACAACATG 708 consensus_14076#1 ------------------------------------------------------------ consensus_14076#2 ------------------------------------------------------------ consensus_14076#0 CTATTACATACATACAGTACTAGTAACGATCACTTGAACATATGGTGTCAGCATGATGCA 768 consensus_14076#1 ------------------------------------------------------------ consensus_14076#2 ------------------------------------------------------------ consensus_14076#0 AAAGCTTAATTTAAGTTAATGAGAAATTGCAGGCGAATCATTCATATCTTCAACGAAACA 828 consensus_14076#1 -------------------ATGCTGCGGCACACGTATCCTGATGGTGTATATGGGAGGAT 657 consensus_14076#2 ------------------------------------------------------------ consensus_14076#0 AAACAATCAGCTGCTGACCATGCTGCGGCACACGTATCCTGATGGTGTATATGGGAGGAT 888 consensus_14076#1 CAGCTGATCCCCTCTCTTGCAGCGTCATCTGCCTCGGCTCACCACCGCACATGATCGGCT 717 consensus_14076#2 ------------------------------------------------------------ consensus_14076#0 CAGCTGATCCCCTCTCTTGCAGCGTCATCTGCCTCGGCTCACCACCGCACATGATCGGCT 948 consensus_14076#1 GGTTAAAACCACCATTAAACGCGATGCCAAACTGAGCGTTGGGGGTCATCTTGGTCGCTG 777 consensus_14076#2 -------------------------------------------GGTCAATTTGGTN-CTT 16 consensus_14076#0 GGTTAAAACCACCATTAAACGCGATGCCAAACTGAGCGTTGGGGGTCATCTTGGTCGCTG 1008 ***** ***** ** consensus_14076#1 CCGGGTTGTAGAAAAGGATCAGGCCCTCTCCAGCCGATGGAGGAAGACCGTTCATGGTCT 837 consensus_14076#2 CCGGGTTTTAAAAAAGGATTAAGCCTTCTCCAACCGATGGAGGAAAACCGTTCATGGTCT 76 consensus_14076#0 CCGGGTTGTAGAAAAGGATCAGGCCCTCTCCAGCCGATGGAGGAAGACCGTTCATGGTCT 1068 ******* ** ******** * *** ****** ************ ************** consensus_14076#1 TCCAGTAGACCGGCGCCTTGCCCAGCTCGAACTCCGCCCATGTCGGAAGCGAGCACTCGT 897 consensus_14076#2 TCCAGTANACCGGCGCCTTGCCCAGCTCGAACTCCGCCCATGTCGGAAACGAGCACTCGT 136 consensus_14076#0 TCCAGTAGACCGGCGCCTTGCCCAGCTCGAACTCCGCCCATGTCGGAAGCGAGCACTCGT 1128 ******* **************************************** *********** consensus_14076#1 TGGTCTGCGG-CACGGCGGGCGCC-GTGGCCGCGGCAGGCGCCGCGGCGGCGCCTGTGCG 955 consensus_14076#2 TGGTCTGCGNGCACGGCGGGCGCNCGTTNGCCCNNGNAGCGCCGCGGCGGCGCCTGTGCG 196 consensus_14076#0 TGGTCTGCGG-CACGGCGGGCGCC-GTGGCCGCGGCAGGCGCCGCGGCGGCGCCTGTGCG 1186 ********* ************ ** * * ********************** consensus_14076#1 GACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCT 1015 consensus_14076#2 GACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCT 256 consensus_14076#0 GACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCT 1246 ************************************************************ consensus_14076#1 TGCCGGCCGCCGGGGACGGCGCTGGACGGCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGA 1075 consensus_14076#2 TGCCGGCCGCCGGGGACGGCGCTGGNANGCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGA 316 consensus_14076#0 TGCCGGCCGCCGGGGACGGCGCTGGACGGCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGA 1306 ************************* ******************************** consensus_14076#1 AGAGAGCGTGGCCATCCTACAGTCTACACTTGTGAATTGTGATAGCTGATGAAAGAAAGA 1135 consensus_14076#2 AGAGAGCGTGGCCATCCTACAGTCTACACTTGTGAATTG--------------------- 355 consensus_14076#0 AGAGAGCGTGGCCATCCTACAGTATGCACT------------------------------ 1336 *********************** * **** consensus_14076#1 GAAGAGAATCCGAAGTGAGTTTGCGAAGGAGGCATATATAAGGATGGATCATGATATTAT 1195 consensus_14076#2 ------------------------------------------------------------ consensus_14076#0 ------------------------------------------------------------ consensus_14076#1 CGTGGATGGAGAGGTGAGGTGAGGTGAGGGGCTTGGCTGCGCGTGTGTGGTGGTGAGGT 1254 consensus_14076#2 ----------------------------------------------------------- consensus_14076#0 ----------------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||