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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14097#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 3550 fasta sequence
[CCCAACCACCGGTCGCCGCCGGCGAGATGCTGCCCTACCACGGCGATCGCCACCGGGGCTCGCCCCCGCCGTACCCCGCGGCAGCGGCGCACTCCTCGCTCTCCCCCTCGGCCGCTCCCTTCACCGTGGACTGCCCCCGCCCCGCGGCGGATCCCAGGGTCCGCAACCCCAACCCCCCCGGGCTCGATCTCCCCACCGCGCCTTCCCTCTACACCACCGCCGCCGCCGGAGACTGGGGGAGCTCGTCGTGGATGGAACCCCCCGCCAGCTACATGGCCCCCTCCCCCGCCGCTGCCACCCCCCCGCCGCCGGCGTATAAAGGTGAAGCTCCTGAAACTGCACCATATGGTATATTCCCTGGGACTTGTCAAATTGGTAACTTTATGGTTACACGTCCATTGAGATCAGAGAGCTCACAACTAACAAGTGCAAAAGGTCCTGGAACTTGGCTAGGAAGTTCAGAGGTTCTGCCCAGTGGTGTTGGGCCATCAGTTTTTAGTCCGCAGCAGAATACCTTTGTGCATAAATCAGAAGATGCAGAACCTTATCCTACACAGCGAGGTTTATTACAGTATCCTCCTCAGTATCCTGCATATGACAAATACATGACACAGCTTTCATCATGTTCAACAAATGTGCCACCTCCTGTCATGTGGACGCCACCTGCCAATTCTTCTGAAGTGGTCGAACAAATGTTTCCAGTGATGAATAAAAATACTGGGGAAAGTTCTTCATCCTTTTCTTCATATATGAATCCTTGTAGAATCAACCTTGATTATTTTGATTGCATGTGGAATGAACAAAAAGATCTTGGGCATCAGACTACTGATAAACACCATGGAAAATGGAGCAGCTCTGCTAGCAATGCGGGAGACCATTTGCTCAATTCTCTTGGAGCAGATCACCGTGCTGCAAGGTGTTTTGGAAATGGGAGACCTATACAGGAATCTTCAGAGATGAAATATGACCGGGGTAGCTTTAATTCCAAAGTTTCTCCATCTGAGGTTGGATATGTTCAGTCTCGTGAATTTTCATCCGAGTTGCCTGAGGTTAATAACCCCACTGTTGATTCACCTTGTTGGAAGGGTGCACCTATTGCATATCCTCCTTCATTTGGTATTATGAAAAATACCGACAATTCCCACTCTGTAAATGGGGTAGGTGGTTATCAAATCGAGCAATCACCCGAATGGAGTTTAAAGTATTCAGAGCTATTCTCCAAACATCAGGAAGTATCAGCTTCTGAAAGTGTCAAAAGTGATGCTTTGAAGACATTCAAGTTGCCCGAGACACGTAAAAACACTGAAGATAATAAAGAAGTACTTCCGGTCTGTATTGGGGTTCATAATGGTATTGGTAACAATGCAAGTTATTTTCCTGAAGAACAAAATTCCAGAAGACAGAAATGCTATGATTCTACAGGAGATTGTAAGAACATGATAGCTGCGAATCAACAGGAAAACCTTTCAGTCAGCAAAGCCAAACTCTTAGGTGAGGATAGTTCCAACCATATTGGGAGCATAACTGAAGAATCAATTAACAAAGGGCCTAGTCCTCTTGGCAGTGCTCCTAGGGCTCTTGTTGAGAATCTGAGTGAAAGCCTACATGTTAATGTTTGTTCTCAAGCAGCTGGGGCAGAGGAATGCACACAGGCTCAAATATGTGCAAAAGGAGGTCAGCAGCCTCGCTATTATTCAGATTCTGGGGGGAGCATGTTGAAGACGTCTTCTGAATCAAGATCGAAGTCTCGGGCAGAACTTCTGAAACAAATGCATGATTTATCGGCAATGCTTCTGTCCACTTGCAATAGCGTTCCATTACAGGGATATGAAGAGGAACTTCTGCAATTAGTGATTCAAAATCTTAGAGATGCTAGTTCCTGTATAAGCAAGGTTCAAAATATGAGTTGTTCAAGGAATAACTTATGGATGGCAATGCCTGAACACTCATTAGTAGAGAACGATTCAGAATTGAAGACCTCTATTTCACAGGCTGTTGCTAAGCTCCCAGAGGATAAGACGCTTGATGATATTGATGTCTCGCAATTGTCGATCTACAAAAATTTGTGGGTTGAAGCAGAAGCATCAGCATGTAAGCTCAAATATGAGCTTCAACTTACCCGTGTGAAGCTTGCAGCAATGGAAAATCACAATAACACACAAGTTCCTGTTGACTTATCAAAAGGCAATAAAATCTTTATCTCAACCATACCCAATAGTAAACCACAAAACAGCACTGCCTATCCTGCGAACTTGCAATGTCAGGGAGCAGATAGTTGTGACGGGCAACTTCCTGCAGTAAATAGGAGCATCATTGATGGTGTTGATGCTGAGGTGATTGAGCGATTGAAATTTTTACAGTCCAATTTGAAGGATTGTCGTGCTTTTTGCCAAAACAACTGTGAAGAGCAGGAAGAAGCAAGCAAAAAACCATGTGCAATTGAAGATGCTGTTATGGCCAGGCTAAGGGTTTTGAATTCGTGTCCTGATAATATAGCCTCTCTAAAACAGGAAAACAACAACCACCACCAGCTAGATACAAGCACAAACAGAGCAGATAATATTGATGATGCTGTTATGTCTAGGCTGAGAATTTTGAAGTCCCGTCCTGATAATGTAAACCCACTGGGTCAGGAAAGCAGCAAGCATGAGCCAGATGCAGCTACAGGCACAAATAATTTTATTGACAATGCTGTTATGTCTAGGCTGAGAATTTTGAAGTCCCGTCCTGATAATGCAAACTCATTGGGTCAGGAAAGCAGCAAGCATGAGCCAGATGCAAGCACAGGCACAAATGATTTAATTGATAATGCTGTTATGTCTAGACTGAGAATTTTGAAGTGCCGTGACGATAATATAAATTCATT-GGACGATGCCATCAAGCAGCATGTAGAAGCAT-GTACTGAT-CAA-CC-AAATTGGGATGAAGATGGTGTTGTGGCCAAAATACAAGCTCCAAATGGC-G-ACACTGTGAGCACTGCTGACGGGTTCCAAAATATTCTGCA-TTCTAATAATTTTGTGAGGCACTCGGAAGGAAAAGATTCTGTCAGTGG-TCTAGACTCTCCTGGTGATGCAACCTGTAGTGATGAAGATAATGGTCGCAAGGCACCTTCTGATGAAGTCAATGACAAAACTGCAGTCCAAAGCGAAGGTAGTTTTCCCATGAACATTGGTTGGCCGCTAAGTACAATGGACTCTCATATTTGTACAGCAGGGTCTCAAGAGACGCCCCTAATCTCCTCTTCAGTTCACAGGTATGATATATTTCCGCCGAAGTGGGAGCATATGCTGAAGGAGAACTTCTTCCATCCAGGCAAATAGGCTACCGAACTGAAAGCTATCAAGGAGATCAAGCAACTATGTTTGCTCATGTTCTAACATGCTTATTGTACATATGCTATCGTAATAACGAAACCTGAAAGATCCATCGGTCCTTTTCCTCTATCTGTGACCAGTATATCATGATACACAACTGGTCAGCATATAAACATCTCATACCGTACGATGTATCTATAATAATTGTGCATATTTTGGAGTTTTCAAAAAAAATGTAT]
[+] EMBL AK068850 [CCCAACCACCGGTCGCCGCCGGCGAGATGCTGCCCTACCACGGCGATCGCCACCGGGGCTCGCCCCCGCCGTACCCCGCGGCAGCGGCGCACTCCTCGCTCTCCCCCTCGGCCGCTCCCTTCACCGTGGACTGCCCCCGCCCCGCGGCGGATCCCAGGGTCCGCAACCCCAACCCCCCCGGGCTCGATCTCCCCACCGCGCCTTCCCTCTACACCACCGCCGCCGCCGGAGACTGGGGGAGCTCGTCGTGGATGGAACCCCCCGCCAGCTACATGGCCCCCTCCCCCGCCGCTGCCACCCCCCCGCCGCCGGCGTATAAAGGTGAAGCTCCTGAAACTGCACCATATGGTATATTCCCTGGGACTTGTCAAATTGGTAACTTTATGGTTACACGTCCATTGAGATCAGAGAGCTCACAACTAACAAGTGCAAAAGGTCCTGGAACTTGGCTAGGAAGTTCAGAGGTTCTGCCCAGTGGTGTTGGGCCATCAGTTTTTAGTCCGCAGCAGAATACCTTTGTGCATAAATCAGAAGATGCAGAACCTTATCCTACACAGCGAGGTTTATTACAGTATCCTCCTCAGTATCCTGCATATGACAAATACATGACACAGCTTTCATCATGTTCAACAAATGTGCCACCTCCTGTCATGTGGACGCCACCTGCCAATTCTTCTGAAGTGGTCGAACAAATGTTTCCAGTGATGAATAAAAATACTGGGGAAAGTTCTTCATCCTTTTCTTCATATATGAATCCTTGTAGAATCAACCTTGATTATTTTGATTGCATGTGGAATGAACAAAAAGATCTTGGGCATCAGACTACTGATAAACACCATGGAAAATGGAGCAGCTCTGCTAGCAATGCGGGAGACCATTTGCTCAATTCTCTTGGAGCAGATCACCGTGCTGCAAGGTGTTTTGGAAATGGGAGACCTATACAGGAATCTTCAGAGATGAAATATGACCGGGGTAGCTTTAATTCCAAAGTTTCTCCATCTGAGGTTGGATATGTTCAGTCTCGTGAATTTTCATCCGAGTTGCCTGAGGTTAATAACCCCACTGTTGATTCACCTTGTTGGAAGGGTGCACCTATTGCATATCCTCCTTCATTTGGTATTATGAAAAATACCGACAATTCCCACTCTGTAAATGGGGTAGGTGGTTATCAAATCGAGCAATCACCCGAATGGAGTTTAAAGTATTCAGAGCTATTCTCCAAACATCAGGAAGTATCAGCTTCTGAAAGTGTCAAAAGTGATGCTTTGAAGACATTCAAGTTGCCCGAGACACGTAAAAACACTGAAGATAATAAAGAAGTACTTCCGGTCTGTATTGGGGTTCATAATGGTATTGGTAACAATGCAAGTTATTTTCCTGAAGAACAAAATTCCAGAAGACAGAAATGCTATGATTCTACAGGAGATTGTAAGAACATGATAGCTGCGAATCAACAGGAAAACCTTTCAGTCAGCAAAGCCAAACTCTTAGGTGAGGATAGTTCCAACCATATTGGGAGCATAACTGAAGAATCAATTAACAAAGGGCCTAGTCCTCTTGGCAGTGCTCCTAGGGCTCTTGTTGAGAATCTGAGTGAAAGCCTACATGTTAATGTTTGTTCTCAAGCAGCTGGGGCAGAGGAATGCACACAGGCTCAAATATGTGCAAAAGGAGGTCAGCAGCCTCGCTATTATTCAGATTCTGGGGGGAGCATGTTGAAGACGTCTTCTGAATCAAGATCGAAGTCTCGGGCAGAACTTCTGAAACAAATGCATGATTTATCGGCAATGCTTCTGTCCACTTGCAATAGCGTTCCATTACAGGGATATGAAGAGGAACTTCTGCAATTAGTGATTCAAAATCTTAGAGATGCTAGTTCCTGTATAAGCAAGGTTCAAAATATGAGTTGTTCAAGGAATAACTTATGGATGGCAATGCCTGAACACTCATTAGTAGAGAACGATTCAGAATTGAAGACCTCTATTTCACAGGCTGTTGCTAAGCTCCCAGAGGATAAGACGCTTGATGATATTGATGTCTCGCAATTGTCGATCTACAAAAATTTGTGGGTTGAAGCAGAAGCATCAGCATGTAAGCTCAAATATGAGCTTCAACTTACCCGTGTGAAGCTTGCAGCAATGGAAAATCACAATAACACACAAGTTCCTGTTGACTTATCAAAAGGCAATAAAATCTTTATCTCAACCATACCCAATAGTAAACCACAAAACAGCACTGCCTATCCTGCGAACTTGCAATGTCAGGGAGCAGATAGTTGTGACGGGCAACTTCCTGCAGTAAATAGGAGCATCATTGATGGTGTTGATGCTGAGGTGATTGAGCGATTGAAATTTTTACAGTCCAATTTGAAGGATTGTCGTGCTTTTTGCCAAAACAACTGTGAAGAGCAGGAAGAAGCAAGCAAAAAACCATGTGCAATTGAAGATGCTGTTATGGCCAGGCTAAGGGTTTTGAATTCGTGTCCTGATAATATAGCCTCTCTAAAACAGGAAAACAACAACCACCACCAGCTAGATACAAGCACAAACAGAGCAGATAATATTGATGATGCTGTTATGTCTAGGCTGAGAATTTTGAAGTCCCGTCCTGATAATGTAAACCCACTGGGTCAGGAAAGCAGCAAGCATGAGCCAGATGCAGCTACAGGCACAAATAATTTTATTGACAATGCTGTTATGTCTAGGCTGAGAATTTTGAAGTCCCGTCCTGATAATGCAAACTCATTGGGTCAGGAAAGCAGCAAGCATGAGCCAGATGCAAGCACAGGCACAAATGATTTAATTGATAATGCTGTTATGTCTAGACTGAGAATTTTGAAGTGCCGTGACGATAATATAAATTCATT GGACGATGCCATCAAGCAGCATGTAGAAGCAT GTACTGAT CAA CC AAATTGGGATGAAGATGGTGTTGTGGCCAAAATACAAGCTCCAAATGGC G ACACTGTGAGCACTGCTGACGGGTTCCAAAATATTCTGCA TTCTAATAATTTTGTGAGGCACTCGGAAGGAAAAGATTCTGTCAGTGG TCTAGACTCTCCTGGTGATGCAACCTGTAGTGATGAAGATAATGGTCGCAAGGCACCTTCTGATGAAGTCAATGACAAAACTGCAGTCCAAAGCGAAGGTAGTTTTCCCATGAACATTGGTTGGCCGCTAAGTACAATGGACTCTCATATTTGTACAGCAGGGTCTCAAGAGACGCCCCTAATCTCCTCTTCAGTTCACAGGTATGATATATTTCCGCCGAAGTGGGAGCATATGCTGAAGGAGAACTTCTTCCATCCAGGCAAATAGGCTACCGAACTGAAAGCTATCAAGGAGATCAAGCAACTATGTTTGCTCATGTTCTAACATGCTTATTGTACATATGCTATCGTAATAACGAAACCTGAAAGATCCATCGGTCCTTTTCCTCTATCTGTGACCAGTATATCATGATACACAACTGGTCAGCATATAAACATCTCATACCGTACGATGTATCTATAATAATTGTGCATA ]
[+] EMBL CF304192 [ CATGATAGCTGCGAATCAACAGGAAAACCTTTCAGTCAGCAAAGCCAAACTCTTAGGTGAGGATAGTTCCAACCATATTGGGAGCATAACTGAAGAATCAATTAACAAAGGGCCTAGTCCTCTTGGCAGTGCTCCTAGGGCTCTTGTTGAGAATCTGAGTGAAAGCCTACATGTTAATGTTTGTTCTCAAGCAGCTGGGGCAGAGGAATGCACACAGGCTCAAATATGTGCAAAAGGAGGTCAGCAGCCTCGCTATTATTCAGATTCTGGGGGGAGCATGTTGAAGACGTCTTCTGAATCAAGATCGAAGTCTCGGGCAGAACTTCTGAAACAAATGCATGATTTATCGGCAATGCTTCTGTCCACTTGCAATAGCGTTCCATTACAGGGATATGAAGAGGAACTTCTGCAATTAGTGATTCAAAATCTTAGAGATGCTAGTTCCTGTATAAGCAAGGTTCAAAATATGAGTTGTTCAAGGAATAACTTATGGATGGCAATGCCTGAACACTCATTAGTAGAGAACGATTCAGAATTGAAGACCTCTATTTCACAGGCTGTTGCTAAGCTCCCAGAGGATAAGACGCTTGATGATATTGAT ]
[+] EMBL CF304127 [ CATGATAGCTGCGAATCAACAGGAAAACCTTTCAGTCAGCAAAGCCAAACTCTTAGGTGAGGATAGTTCCAACCATATTGGGAGCATAACTGAAGAATCAATTAACAAAGGGCCTAGTCCTCTTGGCAGTGCTCCTAGGGCTCTTGTTGAGAATCTGAGTGAAAGCCTACATGTTAATGTTTGTTCTCAAGCAGCTGGGGCAGAGGAATGCACACAGGCTCAAATATGTGCAAAAGGAGGTCAGCAGCCTCGCTATTATTCAGATTCTGGGGGGAGCATGTTGAAGACGTCTTCTGAATCAAGATCGAAGTCTCGGGCAGAACTTCTGAAACAAATGCATGATTTATCGGCAATGCTTCTGTCCACTTGCAATAGCGTTCCATTACAGGGATATGAAGAGGAACTTCTGCAATTAGTGATTCAAAATCTTAGAGATGCTAGTTCCTGTATAAGCAAGGTTCAAAATATGAGTTGTTCAAGGAATAACTTATGGATGGCAATGCCTGAACACTCATTAGTAGAGAACGATTCAGAATTGAAGACCTCTAT ]
[+] EMBL OSS2602A [ gnanatACAAATGCATGATTTATCGGCAATGCTTCTGTCCACTTGCAATAGCGTTCCATTACAGGGATATGAAGAGGAACTTCTGCAATTAGTGATTCAAAATCTTAGAGATGCTAGTTCCTGTATAAGCAAGGTTCAAAATATGAGTTGTTCAAGGAATAACTTATGGATGGCAATGCCTGAACACTCATTAGTAGAGAACGATTCAGAATTGAAGACCTCTATTTCACAGGCTGTTGCTAAGCTCCCAGAGGATAAGACGCTTGATGATATTGATGTCTCGCAATTG ]
[+] EMBL CA999686 [ GCTTCTGTCCACTTGCAATAGCGTTCCATTACAGGGATATGAAGAGGAACTTCTGCAATTAGTGATTCAAAATCTTAGAGATGCTAGTTCCTGTATAAGCAAGGTTCAAAATATGAGTTGTTCAAGGAATAACTTATGGATGGCAATGCCTGAACACTCATTAGTAGAGAACGATTCAGAATTGAAGACCTCTATTTCACAGGCTGTTGCTAAGCTCCCAGAGGATAAGACGCTTGATGATATTGATGTCTCGCAATTGTCGATCTACAAAAATTTGTGGGTTGAAGCAGAAGCATCAGCATGTAAGC ]
[+] EMBL CF318776 [ AATAGTAAACCACAAAACAGCACTGCCTATCCTGCGAACTTGCAATGTCAGGGAGCAGATAGTTGTGACGGGCAACTTCCTGCAGTAAATAGGAGCATCATTGATGGTGTTGATGCTGAGGTGATTGAGCGATTGAAATTTTTACAGTCCAATTTGAAGGATTGTCGTGCTTTTTGCCAAAACAACTGTGAAGAGCAGGAAGAAGCAAGCAAAAAACCATGTGCAATTGAAGATGCTGTTATGGCCAGGCTAAGGGTTTTGAATTCGTGTCCTGATAATATAGCCTCTCTAAAACAGGAAAACAACAACCACCACCAGCTAGATACAAGCACAAACAGAGCAGATAATATTGATGATGCTGTTATGTCTAGGCTGAGAATTTTGAAGTCCCGTCCTGATAATGTAAACCCACTGGGTCAGGAAAGCAGCAAGCATGAGCCAGATGCAGCTACAGGCACAAATAATTTTATTGACAATGCTGTTATGTCTAGGCTGAGAATTTTGAAGTCCCGTCCTGATAATGCAAACTCATTGGGTCAGGAAAGCAGCAAGCATGAGCCAGATGCAAGCACAGGCACAAATGATTTAATTGATAATGC ]
[+] EMBL CB675930 [ CCAAAACAACTGTGAAGAGCAGGAAGAAGCAAGCAAAAAACCATGTGCAATTGAAGATGCTGTTATGGCCAGGCTAAGGGTTTTGAATTCGTGTCCTGATAATATAGCCTCTCTAAAACAGGAAAACAACAACCACCACCAGCTAGATACAAGCACAAACAGAGCAGATAATATTGATGATGCTGTTATGTCTAGGCTGAGAATTTTGAAGTCCCGTCCTGATAATGTAAACCCACTGGGTCAGGAAAGCAGCAAGCATGAGCCAGATGCAGCTACAGGCACAAATAATTTTATTGACAATGCTGTTATGTCTAGGCTGAGAATTTTGAAGTCCCGTCCTGATAATGCAAACTCATTGGGTCAGGAAAGCAGCAAGCATGAGCCAGATGCAAGCACAGGCACAAATGATTTAATTGATAATGCTGTTATGTCTAGACTGAGAATTTTGAAGTGCCGTGACGATAATATAAATTCATT GGACGATGCCATCAAGCAGCATGTAGAAGCAT GTACTGAT CAA CC AAATTGGGATGAAGATGGTGTTGTGGCCAAAATACAAGCTCCAAATGGC G ACACTGTGAGCACTGCTGACGGGTTCCAAAATATTCTGCA TTCTAATAATTTTGTGAGGCACTCGGAAGGAAAAGATTCTGTCAGTGG TCTAGACTCTCCTGGTGATGCAACCTGTAGTGATGAAGATAATGGTCGCAAGGCACCTTCTGATGAAGTCAATGACAAAACTGCAGTCCAAAGCGAAAGTAGTTTTCCCATGAACATTGGTTGGCCGCTAAGTACAATGGACTCTC ]
[+] EMBL OSR07191A [ AGCCAGATGCAGCTACAGGCACAAATAATTTTATTGACAATGCTGTTATGTCTAGGCTGAGAATTTTGAAGTCCCGTCCTGATAATGCAAACTCATTGGGTCAGGAAAGCAGCAAGCATGAGCCAGATGCAAGCACAGGCACAAATGATTTAATTGATAATGCTGTTATGTCTAGACTGAGAATTTTGAAGTGCCGTGACGATAATATAAATTCATT GGACGATGCCATCAAGCAGCATGTAGAAGCAT GTACTGNT CAA CC AAATTGGGATGAAGATGGTGTTGTGGCCAAAATACAAGCTCCAAATGGC GNCCACTGTGAGCACTGCTGACGGGTTCCAAAATATT ]
[+] EMBL AU101633 [ AGCCAGATGCAGCTACAGGCACAAATAATTTTATTGACAATGCTGTTATGTCTAGGCTGAGAATTTTGAAGTCCCGTCCTGATAATGCAAACTCATTGGGTCAGGAAAGCAGCAAGCATGAGCCAGATGCAAGCACAGGCACAAATGATTTAATTGATAATGCTGTTATGTCTAGACTGAGAATTTTGAAGTGCCGTGACGATAATATAAATTCATT GGACGATGCCATCAAGCAGCATGTAGAAGCAT GTACTGAT CAA CC AAATTGGGATGAAGATGGTGTTGTGGCCAAAATACAAGCTCCAAATGGC G ACACTGTGAGCACTGCTGACGGGTTCCAAAATATTCTGCA TTCTAATAATTTTGTGAGGCACTCGGAAGGAAAAGATTCTGTCAGTGG TCTAGACTCTCCTGGTGATGCAACCTGTAGTGATGAAGATAATGGTCGCAAGGCACCTTCTGATGAAGTCAATGACAAAACTGCAGTCCAAAGCGAAGGTAGTTTTCCCATGAACATTGG ]
[-] EMBL CB675931 [ ATGAGCCAGATGCAAGCACAGGCACAAATGATTTAATTGATAATGCTGTTATGTCTAGACTGAGAATTTTGAAGTGCCGTGACGATAATATAAATTCATT GGACGATGCCATCAAGCAGCATGTAGAAGCAT GTACTGAT CAA CC AAATTGGGATGAAGATGGTGTTGTGGCCAAAATACAAGCTCCAAATGGC G ACACTGTGAGCACTGCTGACGGGTTCCAAAATATTCTGCA TTCTAATAATTTTGTGAGGCACTCGGAAGGAAAAGATTCTGTCAGTGG TCTAGACTCTCCTGGTGATGCAACCTGTAGTGATGAAGATAATGGTCGCAAGGCACCTTCTGATGAAGTCAATGACAAAACTGCAGTCCAAAGCGAAGGTAGTTTTCCCATGAACATTGGTTGGCCGCTAAGTACAATGGACTCTCATATTTGTACAGCAGGGTCTCAAGAGACGCCCCTAATCTCCTCTTCAGTTCACAGGTATGATATATTTCCGCCGAAGTGGGAGCATATGCTGAAGGAGAACTTCTTCCATCCAGGCAAATAGGCTACCGAACTGAAAGCTATCAAGGAGATCAAGCAACTATGTTTGCTCATGTTCTAACATGCTTATTGTACATATGCTATCGTAATAACGAAACCTGAAAGATCCATCGGTCCTTTTCCTCTATCTGTGACCAGTATATCATGATACACAACTGGTCAGCATATAAACATCTCATACCGTACGATGTATCTATAATAATAGTGCATATTTTGGAGTTTTCATGAATTGTGTAT]
[+] EMBL AU101634 [ CATT GGGCGATGCCATCAAGCAGCATGTAGAAGCAT GTACTGATCCAACCC AAATTGGGATGAAGATGGTGTTGTGGCCAAAATACAAGCTCCAAATGGC G ACACTGTGAGCACTGCTGACGGGTTCCAAAATATTCTGCA TTCTAATAATTTTGTGAGGCACTCGGAAGGAAAAGATTCTGTCAGTGG TCTAGACTCTCCTGGTGATGCAACCTGTAGTGATGAAGATAATGGTCGCAAGGCACCTTCTGATGAAGTCAATGACAAAACTGCAGTCCAAAGCGAAGGTAGTTTTCCCATGAACATTGGTTGGCCGCTAAGTACAATGGACTCTCATATTTGTACAGCAGGGTCTCAAGAGACGCCCCTAATCTCCTCTTCAGTTCACAGGTATGATATATTTCCGCCGAAGTGGGAGCATATGCTGAAGGAGAACTTCTTCCATCCAGGCAAATAGGCTACCGAACTGAAAGCTATCAAGGAGATCAAGCAACTATGTTTGCTCATGTTCTAACATGCTTATTGTACATATGCTATCGTAATAACGAAACCTGAAAGATCCATCGGTCCTTTTCCTCTATCTGTGACCAGTATATCATGATACACAACTGGTCAGCATATAAACATCTCATACCGTACGATGTATCTATAATAATTGTGCATATTTTGGAGTTTTCAAAAAAAA ]
[+] EMBL AU164610 [ ATTGGGACGATGCCATCAAGCAGCATGTAGAAGCATGGTACTGAT CAA CCAAAATTGGGATGAAGATGGTGTTGTGGCCAAAATCCAAGCTCCAAATGGCGG ACACTGTGAGCACTGCTGACGGGTTCCAAAATATTCTGCA TTCTAATAATTTTGTGAGGCACTCGGAAGGAAAAGATTCTGTCAGTGG TCTAGACTCTCCTGGTGATGCAACCTGTAGTGATGAAGATAATGGTCGCAAGGCACCTTCTGATGAAGTCAATGACAAAACTGCAGTCCAAAGCGAAGGTAGTTTTCCCATGAACATTGGTTGGCCGCTAAGTACAATGGACTCTCATATTTGTACAGCAGGGTCTCAAGAGACGCCCCTAATCTCCTCTTCAGTTCACAGGTATGATATATTTCCGCCGAAGTGGGAGCATATGCTGAAGGAGAACTTCTTCCATCCAGGCAAATAGGCTACCGAACTGAAAGCTATCAAGGAGATCAAGCAACTATGTTTGCTCATGTTCTAACATGCTTATTGTACATATGCTATCGTAATAACGAAACCTGAAAGATCCATCGGTCCTTTTCCTCTATCTGTGACCAGTATATCATGATACACAACTGGTCAGCATATAAACATCTCATACCGTACGATGTATCTATAATAATTGTGCATATTTTGGAGTTTTCAAAAAAAA ]
[-] EMBL CF318777 [ TGGC G ACACTGCGAGCACTGCTGACGGGTTCCAAAATATTCTGCA TTCTAATAATTTTGTGAGGCACTCGGAAGGAAAAGATTCTGTCAGTGG TCTAGACTCTCCTGGTGATGCAACCTGTAGTGATGAAGATAATGGTCGCAAGGCACCTTCTGATGAAGTCAATGACAAAACTGCAGTCCAAAGCGAAGGTAGTTTTCCCATGAACATTGGTTGGCCGCTAAGTACAATGGACTCTCATATTTGTACAGCAGGGTCTCAAGAGACGCCCCTAATCTCCTCTTCAGTTCACAGGTATGATATATTTCCGCCGAAGTGGGAGCATATGCTGAAGGAGAACTTCTTCCATCCAGGCAAATAGGCTACCGAACTGAAAGCTATCAAGGAGATCAAGCAACTATGTTTGCTCATGTTCTAACATGCTTATTGTACATATGCTATCGTAATAACGAAACCTGAAAGATCCATCGGTCCTTTTCCTCTATCTGTGACCAGTATATCATGATACACAACTGGTCAGCATATAAACATCTCATACCGTACGATGTATCTATAATAATTGTGCATATTTTGGAGTTTTAAAAAAAA ]
[+] EMBL BI809892 [ TTCCAAAATATTCGGCATTTCTAATAATTTTGTGAGCCACTCGGAAGGAAAAGATTCTGTCAGTGGTTCTAGACTCTCCTGGTGAT CCACCTGTAGTGATGAAGATAATGGTTGCAAGGCACCTTCTGATGAAGTCAATGAC AAACTGCAGTCCCAAGCGAAGGTAGTTTTCCCATGAACATTGGTTGGCCGCTAAGTAC ATGGACTCTCATATTTGTACAGCAGGGTCTCAAGAGACGCCCCTAATCTCCTCTTCAGTTCACAGGTATGATATATTTCCGCCGAAGTGGGAGCATATGCTGAAGGAGAACTTCTTCCATCCAGGCAAATAGGCTACCGAACTGAAAGCTATCAAGGAGATCAAGCAACTATGTTTGCTCATGTTCTAACATGCTTATTGTACATATGCTATCGTAATAACGAAACCTGAAAGATCCATCGGTCCTTTTCCTCTATCTGTGACCAGTATATCATGATACAC ACTGGTCAGCATATAAACATCTCATACCGTACGATGTATCTATAATAATTGTGCATATTTTGGAGTTTTAAAAAAA ]
consensusID : consensus_14097#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 382 fasta sequence
[AGTGATGAAGATAATGGTCGCAAGGCACCTTCTGATGAAGTCAATGACAAAACTGCAGTCCAAAGCGAAGTTCACAGGTATGATATATTTCCGCCGAAGTGGGAGCATATGCTGAAGGAGAACTTCTTCCATCCAGGCAAATAGGCTACCGAACTGAAAGCTATCAAGGAGATCAAGCAACTATGTTTGCTCATGTTCTAACATGCTTATTGTACATATGCTATCGTAATAACGAAACCTGAAAGATCCATCGGTCCTTTTCCTCTATCTGTGACCAGTATATCATGATACACAACTGGTCAGCATATAAACATCTCATACCGTACGATGTATCTATAATAATTGTGCATATTTTGGAGTTTTCAAAAAAAAAAAAAAAAAA]
[+] EMBL AU197821 [AGTGATGAAGATAATGGTCGCAAGGCACCTTCTGATGAAGTCAATGACAAAACTGCAGTCCAAAGCGAAGTTCACAGGTATGATATATTTCCGCCGAAGTGGGAGCATATGCTGAAGGAGAACTTCTTCCATCCAGGCAAATAGGCTACCGAACTGAAAGCTATCAAGGAGATCAAGCAACTATGTTTGCTCATGTTCTAACATGCTTATTGTACATATGCTATCGTAATAACGAAACCTGAAAGATCCATCGGTCCTTTTCCTCTATCTGTGACCAGTATATCATGATACACAACTGGTCAGCATATAAACATCTCATACCGTACGATGTATCTATAATAATTGTGCATATTTTGGAGTTTTCAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14097#0 CCCAACCACCGGTCGCCGCCGGCGAGATGCTGCCCTACCACGGCGATCGCCACCGGGGCT 60
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 CGCCCCCGCCGTACCCCGCGGCAGCGGCGCACTCCTCGCTCTCCCCCTCGGCCGCTCCCT 120
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 TCACCGTGGACTGCCCCCGCCCCGCGGCGGATCCCAGGGTCCGCAACCCCAACCCCCCCG 180
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 GGCTCGATCTCCCCACCGCGCCTTCCCTCTACACCACCGCCGCCGCCGGAGACTGGGGGA 240
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 GCTCGTCGTGGATGGAACCCCCCGCCAGCTACATGGCCCCCTCCCCCGCCGCTGCCACCC 300
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 CCCCGCCGCCGGCGTATAAAGGTGAAGCTCCTGAAACTGCACCATATGGTATATTCCCTG 360
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 GGACTTGTCAAATTGGTAACTTTATGGTTACACGTCCATTGAGATCAGAGAGCTCACAAC 420
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 TAACAAGTGCAAAAGGTCCTGGAACTTGGCTAGGAAGTTCAGAGGTTCTGCCCAGTGGTG 480
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 TTGGGCCATCAGTTTTTAGTCCGCAGCAGAATACCTTTGTGCATAAATCAGAAGATGCAG 540
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 AACCTTATCCTACACAGCGAGGTTTATTACAGTATCCTCCTCAGTATCCTGCATATGACA 600
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 AATACATGACACAGCTTTCATCATGTTCAACAAATGTGCCACCTCCTGTCATGTGGACGC 660
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 CACCTGCCAATTCTTCTGAAGTGGTCGAACAAATGTTTCCAGTGATGAATAAAAATACTG 720
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 GGGAAAGTTCTTCATCCTTTTCTTCATATATGAATCCTTGTAGAATCAACCTTGATTATT 780
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 TTGATTGCATGTGGAATGAACAAAAAGATCTTGGGCATCAGACTACTGATAAACACCATG 840
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 GAAAATGGAGCAGCTCTGCTAGCAATGCGGGAGACCATTTGCTCAATTCTCTTGGAGCAG 900
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 ATCACCGTGCTGCAAGGTGTTTTGGAAATGGGAGACCTATACAGGAATCTTCAGAGATGA 960
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 AATATGACCGGGGTAGCTTTAATTCCAAAGTTTCTCCATCTGAGGTTGGATATGTTCAGT 1020
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 CTCGTGAATTTTCATCCGAGTTGCCTGAGGTTAATAACCCCACTGTTGATTCACCTTGTT 1080
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 GGAAGGGTGCACCTATTGCATATCCTCCTTCATTTGGTATTATGAAAAATACCGACAATT 1140
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 CCCACTCTGTAAATGGGGTAGGTGGTTATCAAATCGAGCAATCACCCGAATGGAGTTTAA 1200
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 AGTATTCAGAGCTATTCTCCAAACATCAGGAAGTATCAGCTTCTGAAAGTGTCAAAAGTG 1260
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 ATGCTTTGAAGACATTCAAGTTGCCCGAGACACGTAAAAACACTGAAGATAATAAAGAAG 1320
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 TACTTCCGGTCTGTATTGGGGTTCATAATGGTATTGGTAACAATGCAAGTTATTTTCCTG 1380
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 AAGAACAAAATTCCAGAAGACAGAAATGCTATGATTCTACAGGAGATTGTAAGAACATGA 1440
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 TAGCTGCGAATCAACAGGAAAACCTTTCAGTCAGCAAAGCCAAACTCTTAGGTGAGGATA 1500
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 GTTCCAACCATATTGGGAGCATAACTGAAGAATCAATTAACAAAGGGCCTAGTCCTCTTG 1560
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 GCAGTGCTCCTAGGGCTCTTGTTGAGAATCTGAGTGAAAGCCTACATGTTAATGTTTGTT 1620
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 CTCAAGCAGCTGGGGCAGAGGAATGCACACAGGCTCAAATATGTGCAAAAGGAGGTCAGC 1680
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 AGCCTCGCTATTATTCAGATTCTGGGGGGAGCATGTTGAAGACGTCTTCTGAATCAAGAT 1740
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 CGAAGTCTCGGGCAGAACTTCTGAAACAAATGCATGATTTATCGGCAATGCTTCTGTCCA 1800
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 CTTGCAATAGCGTTCCATTACAGGGATATGAAGAGGAACTTCTGCAATTAGTGATTCAAA 1860
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 ATCTTAGAGATGCTAGTTCCTGTATAAGCAAGGTTCAAAATATGAGTTGTTCAAGGAATA 1920
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 ACTTATGGATGGCAATGCCTGAACACTCATTAGTAGAGAACGATTCAGAATTGAAGACCT 1980
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 CTATTTCACAGGCTGTTGCTAAGCTCCCAGAGGATAAGACGCTTGATGATATTGATGTCT 2040
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 CGCAATTGTCGATCTACAAAAATTTGTGGGTTGAAGCAGAAGCATCAGCATGTAAGCTCA 2100
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 AATATGAGCTTCAACTTACCCGTGTGAAGCTTGCAGCAATGGAAAATCACAATAACACAC 2160
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 AAGTTCCTGTTGACTTATCAAAAGGCAATAAAATCTTTATCTCAACCATACCCAATAGTA 2220
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 AACCACAAAACAGCACTGCCTATCCTGCGAACTTGCAATGTCAGGGAGCAGATAGTTGTG 2280
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 ACGGGCAACTTCCTGCAGTAAATAGGAGCATCATTGATGGTGTTGATGCTGAGGTGATTG 2340
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 AGCGATTGAAATTTTTACAGTCCAATTTGAAGGATTGTCGTGCTTTTTGCCAAAACAACT 2400
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 GTGAAGAGCAGGAAGAAGCAAGCAAAAAACCATGTGCAATTGAAGATGCTGTTATGGCCA 2460
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 GGCTAAGGGTTTTGAATTCGTGTCCTGATAATATAGCCTCTCTAAAACAGGAAAACAACA 2520
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 ACCACCACCAGCTAGATACAAGCACAAACAGAGCAGATAATATTGATGATGCTGTTATGT 2580
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 CTAGGCTGAGAATTTTGAAGTCCCGTCCTGATAATGTAAACCCACTGGGTCAGGAAAGCA 2640
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 GCAAGCATGAGCCAGATGCAGCTACAGGCACAAATAATTTTATTGACAATGCTGTTATGT 2700
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 CTAGGCTGAGAATTTTGAAGTCCCGTCCTGATAATGCAAACTCATTGGGTCAGGAAAGCA 2760
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 GCAAGCATGAGCCAGATGCAAGCACAGGCACAAATGATTTAATTGATAATGCTGTTATGT 2820
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 CTAGACTGAGAATTTTGAAGTGCCGTGACGATAATATAAATTCATTGGACGATGCCATCA 2880
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 AGCAGCATGTAGAAGCATGTACTGATCAACCAAATTGGGATGAAGATGGTGTTGTGGCCA 2940
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 AAATACAAGCTCCAAATGGCGACACTGTGAGCACTGCTGACGGGTTCCAAAATATTCTGC 3000
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 ATTCTAATAATTTTGTGAGGCACTCGGAAGGAAAAGATTCTGTCAGTGGTCTAGACTCTC 3060
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 CTGGTGATGCAACCTGTAGTGATGAAGATAATGGTCGCAAGGCACCTTCTGATGAAGTCA 3120
consensus_14097#1 -----------------AGTGATGAAGATAATGGTCGCAAGGCACCTTCTGATGAAGTCA 43
*******************************************
consensus_14097#0 ATGACAAAACTGCAGTCCAAAGCGAAGGTAGTTTTCCCATGAACATTGGTTGGCCGCTAA 3180
consensus_14097#1 ATGACAAAACTGCAGTCCAAAGCGAAG--------------------------------- 70
***************************
consensus_14097#0 GTACAATGGACTCTCATATTTGTACAGCAGGGTCTCAAGAGACGCCCCTAATCTCCTCTT 3240
consensus_14097#1 ------------------------------------------------------------
consensus_14097#0 CAGTTCACAGGTATGATATATTTCCGCCGAAGTGGGAGCATATGCTGAAGGAGAACTTCT 3300
consensus_14097#1 ---TTCACAGGTATGATATATTTCCGCCGAAGTGGGAGCATATGCTGAAGGAGAACTTCT 127
*********************************************************
consensus_14097#0 TCCATCCAGGCAAATAGGCTACCGAACTGAAAGCTATCAAGGAGATCAAGCAACTATGTT 3360
consensus_14097#1 TCCATCCAGGCAAATAGGCTACCGAACTGAAAGCTATCAAGGAGATCAAGCAACTATGTT 187
************************************************************
consensus_14097#0 TGCTCATGTTCTAACATGCTTATTGTACATATGCTATCGTAATAACGAAACCTGAAAGAT 3420
consensus_14097#1 TGCTCATGTTCTAACATGCTTATTGTACATATGCTATCGTAATAACGAAACCTGAAAGAT 247
************************************************************
consensus_14097#0 CCATCGGTCCTTTTCCTCTATCTGTGACCAGTATATCATGATACACAACTGGTCAGCATA 3480
consensus_14097#1 CCATCGGTCCTTTTCCTCTATCTGTGACCAGTATATCATGATACACAACTGGTCAGCATA 307
************************************************************
consensus_14097#0 TAAACATCTCATACCGTACGATGTATCTATAATAATTGTGCATATTTTGGAGTTTTCAAA 3540
consensus_14097#1 TAAACATCTCATACCGTACGATGTATCTATAATAATTGTGCATATTTTGGAGTTTTCAAA 367
************************************************************
consensus_14097#0 AAAAATGTAT----- 3550
consensus_14097#1 AAAAAAAAAAAAAAA 382
***** *
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||