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Oryza sativa
cluster # 14106 cluster # 14106       Sequences # 15       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14106#0 length = 874 sequences # 1  
consensus_14106#1 length = 750 sequences # 13  
consensus_14106#2 length = 280 sequences # 1  

consensusID : consensus_14106#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 874
fasta sequence
                              [CCGGCCCACATGAACCCGGCCCACTTCGCCCCCGCCTCGGACGTTCGGACAAGCTCGACCTCGGACCTCCCTCCAACGGTCCTACATTATTGGGTTGATACTCCAAGAAACACAAATATAACAGCTAAAAGCAATGGAGTCGTTTAAATATACCAAAAGGTGTTCGTCGAGTTCTTTTCAGGACATTGAACACAGATAGGAAGCTCATGTGGAAGAAGGGAGGTGATCTGAGTTATGTCGGATTCACAGATAGATGGTTGCACAGTGGTTAGTCGATATACACTGTGAACATCAAAGCTTAGTTTGGTTAATTTGACTATCCTGAATCAAGTTTGGCCAAGGCCATTAATGGATTCAACCTTTTGGAATTCCACCTGGCCCCCCATTGTTGGGTTCCTTTTTGTCCAAAAAGAATTCCCCCCGGAAAATTAATTCCAATTCCCCTTAAGGTTCCGGAAAAGGGCCCCTTGGAAAGGCCTTAAGGAACCGGAATTGGTTCAAAGGCCTTGGGGAAATTCCTTAACCAATTGCGTTGCCATGTTGGCCTTTAACCCTTCCTTGGAAGCCTTGGTTTGGAATTCCCCGGAAGGGGCCTTCCAACCCAAATTCCAAGGGTTGACCAATCCCTTGGAATTCCAAGTGGAATGTGGCCTTTCCAATCCACCGTGGCCTTCCCTTGGATTAAATTGGCCGAACCACCTTGCCAAGAATTCCAATGCCATTCTTAATGCCTTGCTAACCATCCTGGCTGGAAGGCCCTGGAGGAATTCCCAAGCCCAGGCCTCCGTTAGAAAACCATTAATAAGGGTAAACCGAAAATATATTTGTTGAACCGTAATAATCCAATAAACCCCTTAAAGTAATTTTCCAGTAA]

[+] EMBL BI800188             [CCGGCCCACATGAACCCGGCCCACTTCGCCCCCGCCTCGGACGTTCGGACAAGCTCGACCTCGGACCTCCCTCCAACGGTCCTACATTATTGGGTTGATACTCCAAGAAACACAAATATAACAGCTAAAAGCAATGGAGTCGTTTAAATATACCAAAAGGTGTTCGTCGAGTTCTTTTCAGGACATTGAACACAGATAGGAAGCTCATGTGGAAGAAGGGAGGTGATCTGAGTTATGTCGGATTCACAGATAGATGGTTGCACAGTGGTTAGTCGATATACACTGTGAACATCAAAGCTTAGTTTGGTTAATTTGACTATCCTGAATCAAGTTTGGCCAAGGCCATTAATGGATTCAACCTTTTGGAATTCCACCTGGCCCCCCATTGTTGGGTTCCTTTTTGTCCAAAAAGAATTCCCCCCGGAAAATTAATTCCAATTCCCCTTAAGGTTCCGGAAAAGGGCCCCTTGGAAAGGCCTTAAGGAACCGGAATTGGTTCAAAGGCCTTGGGGAAATTCCTTAACCAATTGCGTTGCCATGTTGGCCTTTAACCCTTCCTTGGAAGCCTTGGTTTGGAATTCCCCGGAAGGGGCCTTCCAACCCAAATTCCAAGGGTTGACCAATCCCTTGGAATTCCAAGTGGAATGTGGCCTTTCCAATCCACCGTGGCCTTCCCTTGGATTAAATTGGCCGAACCACCTTGCCAAGAATTCCAATGCCATTCTTAATGCCTTGCTAACCATCCTGGCTGGAAGGCCCTGGAGGAATTCCCAAGCCCAGGCCTCCGTTAGAAAACCATTAATAAGGGTAAACCGAAAATATATTTGTTGAACCGTAATAATCCAATAAACCCCTTAAAGTAATTTTCCAGTAA]


>consensus_14106#0 CCGGCCCACATGAACCCGGCCCACTTCGCCCCCGCCTCGGACGTTCGGACAAGCTCGACC TCGGACCTCCCTCCAACGGTCCTACATTATTGGGTTGATACTCCAAGAAACACAAATATA ACAGCTAAAAGCAATGGAGTCGTTTAAATATACCAAAAGGTGTTCGTCGAGTTCTTTTCA GGACATTGAACACAGATAGGAAGCTCATGTGGAAGAAGGGAGGTGATCTGAGTTATGTCG GATTCACAGATAGATGGTTGCACAGTGGTTAGTCGATATACACTGTGAACATCAAAGCTT AGTTTGGTTAATTTGACTATCCTGAATCAAGTTTGGCCAAGGCCATTAATGGATTCAACC TTTTGGAATTCCACCTGGCCCCCCATTGTTGGGTTCCTTTTTGTCCAAAAAGAATTCCCC CCGGAAAATTAATTCCAATTCCCCTTAAGGTTCCGGAAAAGGGCCCCTTGGAAAGGCCTT AAGGAACCGGAATTGGTTCAAAGGCCTTGGGGAAATTCCTTAACCAATTGCGTTGCCATG TTGGCCTTTAACCCTTCCTTGGAAGCCTTGGTTTGGAATTCCCCGGAAGGGGCCTTCCAA CCCAAATTCCAAGGGTTGACCAATCCCTTGGAATTCCAAGTGGAATGTGGCCTTTCCAAT CCACCGTGGCCTTCCCTTGGATTAAATTGGCCGAACCACCTTGCCAAGAATTCCAATGCC ATTCTTAATGCCTTGCTAACCATCCTGGCTGGAAGGCCCTGGAGGAATTCCCAAGCCCAG GCCTCCGTTAGAAAACCATTAATAAGGGTAAACCGAAAATATATTTGTTGAACCGTAATA ATCCAATAAACCCCTTAAAGTAATTTTCCAGTAA



consensusID : consensus_14106#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 750
fasta sequence
                              [CTACAACCTGTCGGAGCTAAGATGGAGTGCCACATGGGCACCCACGTCGACGCGCC--GGGCCACATGAACCAGGGCCACTTCGCCGCCGGCCTCGACGTCGACAAGCTCGACCTCGACCTCCTCAACGGTCCTACATTATTGGTTGATACTCCAAGAAACACAAATATAACAGCTAAAGCAATGGAGTCGTTAAATATACCAAAAGGTGTTCGTCGAGTTCTTTTCAGGACATTGAACACAGATAGGAAGCTCATGTGGAAGAAGGGAGGTGATCTGAGTTATGTCGGATTCACAGAAGATGGCGCACAGTGGTTAGTTGACAACACTGACATCAAGCTAGTTGGTATTGACTATCTATCAGTTGCAGCATATGATCACTTGATCACTGCCCATGTGGTCTTTTTCAAATTCCCGAA-TATCATCCTAGTCGAAGGCCTGAAGCTAGACGATGTCAAGGCTGGAATCTACATGCTGCATTGCTTACCTCTGAGGCTGGTTGGATCCGAGGGCTCACCAATCAGGTGCATCCTGATCAAGTGATTGCTTCATCACTGCTCCTGATAATGGCGACACTGCAGATCATGCCATCTGATGCTGCTACATCCTGGCTGAGGCCTTGAGAGTGCCAAGGCCAGCTCAGTAGAAAAACAATAATAAGTGTAAAC-GTATATATATCGTTTGTTTGATCAGTAATAATTCAATAAAGCACTTAAAGTAATTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CB096818             [CTACAACCTGTCGGAGCTAAGATGGAGTGCCACATGGGCACCCACGTCGACGCGCC  GGGCCACATGAACCAGGGCCACTTCGCCGCCGGCCTCGACGTCGACAAGCTCGACCTCGACCTCCTCAACGGTCCTACATTATTGGTTGATACTCCAAGAAACACAAATATAACAGCTAAAGCAATGGAGTCGTTAAATATACCAAAAGGTGTTCGTCGAGTTCTTTTCAGGACATTGAACACAGATAGGAAGCTCATGTGGAAGAAGGGAGGTGATCTGAGTTATGTCGGATTCACAGAAGATGGTGCACAGTGGTTAGTCGATAACACTGACATCAAGCTAGTTGGTATTGACTATCTATCAGTTGCAGCATATGATCACTTGATCACTGCCCATGTGGTCTTTTTCAAAATCCCGAA TATCATCCTAGTCGAAGGCCTGAAGCTAGACGATGTCAAGGCTGGAATCTACATGCTGCATTGCTTACCTCTGAGGCTGGTTGGATCCGAGGGCTCACCAATCAGGTGCATCCTGATCAAGTGATTGCTTCATCACTGCTCCTGATAATGGCGACACTGCAGATCATGCCATCTGATGCTGCTACATACTGGCTGAGGCCTTGAGAGTGCCAAGGCCAGCTCAGTAGAAAAACAATAATAAGTGTAAAC GTATATATATTGGTTGGTTGATCAGTAATAATTCAATAAAGCACTTAAAGTAATT                              ]
[+] EMBL CB096669             [                                                GACGAGACAAGGGGCACATGAACCAGGGCCACTTCGCCGCCGGCCTCGACGTCGACAAGCTCGACCTCGACCTCCTCAACGGTCCTACATTA TGGTTGATACTCCAAGAAACACAAATATAACAGCTAAAGCAATGGAGTCGTTAAATATACCAAAAGGTGTTCGTCGAGTTCTTTTCAGGACATTGAACACAGATAGGAAGCTCATGTGGAAGAAGGGAGGTGATCTGAGTTATGTCGGATTCACAGAAGATGGTGCACAGTGGTTAGTCGATAACACTGACATCAAGCTAGTTGGTATTGACTATCTATCAGTTGCAGCATATGATCACTTGATCACTGCCCATGTGGTCTTTTTCAAAATCCCGAA TATCATCCTAGTCGAAGGCCTGAAGCTAGACGATGTCAAGGCTGGAATCTACATGCTGCATTGCTTACCTCTGAGGCTGGTTGGATCCGAGGGCTCACCAATCAGGTGCATCCTGATCAAGTGATTGCTTCATCACTGCTCCTGATAATGGCGACACTGCAGATCATGCCATCTGATGCTGCTACATACTGGCTGAGGCCTTGAGAGTGCCAAGGCCAGCTCAGTAGAAAAACAATAATAAGTGTAAAC GTATATATATTGTTTGTTTGATCAGTAATAACTCAATAAAGCA                                          ]
[+] EMBL CA767470             [                                                                        AGGGCCACTTCGCCGCCGGCCTCGACGTCGACAAGCTCGACCTCGACCTCCTCAACGGTCCTACATTATTGGTTGATACTCCAAGAAACACAAATATAACAGCTAAAGCAATGGAGTCGTTAAATATACCAAAAGGTGTTCGTCGAGTTCTTTTCAGGACATTGAACACAGATAGGAAGCTCATGTGGAAGAAGGGAGGCGATCTGAGTTATGTCGGATTCACAGAAGATGGTGCACAGTGGTTAGTCGATAACACTGACATCAAGCTAGTTGGTATTGACTATCTATCAGTTGCAGCATATGATCACTTGATCACTGCCCATGTGGTCTTTTTCAAAATCCCGAA TATCATCCTAGTCGAAGGCCTGAAGCTAGACGATGTCAAGGCTGGAATCTACATGCTGCATTGCTTACCTCTGAGGCTGGTTGGATCCGAGGGCTCACCAATCAGGTGCATCCTGATCAAGTGATTGCTTCATCACTGCTCCTGATAATGGCGACACTGCAGATCATGCCATCTGATGCTGCTACATACTGGCTGAGGCCTTGAGAGTGCCAAGGCCAGCTCAGTAGAAAAACAATAATAAGTGTAAAC GTATATATATTGTTTGTTTGATCAGTAATAATTCAATAAAGCACTTAAAGTAATTTTTtc                         ]
[+] EMBL C99283               [                                                                                     CGCCGGCCTCGACGTCGACAAGCTCGACCTCGACNTCCTCAACGGTCCTACATTATTGGTTGATACTCCAAGAAACCCAAATATAACAGCTAAAGCAATGGAGTCGTTAAATATNCCAAAAGGTGTTCGTCGAGTTCTTTTCAGGACATTGAACACAGATAGGAAGCTCATGTGGAAGAAGGGAGGTGATCTGAGTTATGTCGGATTCACAGAAGATGGCGCACAGTGGTTAGTTGACAACACTGACATCAAGCTAGTTGGTATTGACTATCTATCAGTTGCAGCATATGATCACTTGATCACTGCCCATGTGGTCTTTTTCAAATTCCCGAA TATCATCCTAGTCGAAGGCCTGAAGCTAGACGATGTCAAGGCTGGAATCTACATGCTGCATTGCTTACCTCTGAGGCTGGTTGGATCCGAGGGCTCACCAATCAGGTGCATCCTGATCAAGTGATTGCTTCATCACTGCTCCTGATAATGGCGACACTGCAGATCATGCCATCTGATGCTGCTACATCCTGGCTGAGGCCTTGAGAGTGCCAAGGCCAGCTCAGTAGAAAAACAATAATAAGTGTAAAC GTATATATATCGTTTGTTTGATCAGTAATAATTCAATAAAGCACTTAAAGTAAaaa                             ]
[+] EMBL AU184835             [                                                                                        CGGCCTCGACGTCGACAAGCTCGACCTCGACCTCCTCAACGGTCCTACATTATTGGTTGATACTCCAAGAAACACAAATATAACAGCTAAAGCAATGGAGTCGTTAAATATACCAAAAGGTGTTCGTCGAGTTCTTTTCAGGACATTGAACACAGATAGGAAGCTCATGTGGAAGAAGGGAGGTGATCTGAGTTATGTCGGATTCACAGAAGATGGCGCACAGTGGTTAGTTGACAACACTGACATCAAGCTAGTTGGTATTGACTATCTATCAGTTGCAGCATATGATCACTTGATCACTGCCCATGTGGTCTTTTTCAAATTCCCGAA TATCATCCTAGTCGAAGGCCTGAAGCTAGACGATGTCAAGGCTGGAATCTACATGCTGCATTGCTTACCTCTGAGGCTGGTTGGATCCGAGGGCTCACCAATCAGGTGCATCCT                                                                                                                                                                                                                             ]
[+] EMBL AU070929             [                                                                                             TCGACGTCGACAAGCTCGACCTCGACCTCCTCAACGGTCCTACATTATTGGTTGATACTCCAAGAAACACAAATATAACAGCTAAAGCAATGGAGTCGTTAAATATACCAAAAGGTGTTCGTCGAGTTCTTTTCAGGACATTGAACACAGATAGGAAGCTCATGTGGAAGAAGGGAGGTGATCTGAGTTATGTCGGATTCACAGAAGATGGCGCACAGTGGTTAGTTGACAACACTGACATCAAGCTAGTTGGTATTGACTATCTATCAGTTGCAGCATATGATCACTTGATCACTGCCCATGTGGTCTTTTTCAAATTCCCGAATTATCATCCTAGTCGAAGGCCTGAAGCTAGAC                                                                                                                                                                                                                                                                                                                ]
[+] EMBL C27494               [                                                                                                                                                                                      ATGGAGTCGTTAAATATACCAAAAGGTGTTCGTCGAGTTCTTTTCAGGACATTGAACACAGATAGGAAGCTCATGTGGAAGAAGGGAGGTGATCTGAGTTATGTCGGATTCACAGAAGATGGCGCACAGTGGTTAGTTGACANCACTGACATCAAGCTAGTTGGTATTGACTATCTATCAGTTGCAGCATATGATCACTTGATCACTGCCCATGTGGTCTTTTTCAAATTNCCGAATTATCATCCTAGTCGAAGG                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CF323196             [                                                                                                                                                                                          AGTCGTTAAATATACCAAAAGGTGTTCGTCGAGTTCTTTTCAGGACATTGAACACAGATAGGAAGCTCATGTGGAAGAAGGGAGGTGATCTGAGTTATGTCGGATTCACAGAAGATGGCGCACAGTGGTTAGTTGACAACACTGACATCAAGCTAGTTGGTATTGACTATCTATCAGTTGCAGCATATGATCACTTGATCACTGCCCATGTGGTCTTTTTCAAATTCCCGAA TATCATCCTAGTCGAAGGCCTGAAGCTAGACGATGTCAAGGCTGGAATCTACATGCTGCATTGCTTACCTCTGAGGCTGGTTGGATCCGAGGGCTCACCAATCAGGTGCATCCTGATCAAGTGATTGCTTCATCACTGCTCCTGATAATGGCGACACTGCAGATCATGCCATCTGATGCTGCTACATCCTGGCTGAGGCCTTGAGAGTGCCAAGGCCAGCTCAGTAGAAAAACAATAATAAGTGTAAAC GTATATATATCGTTTGTTTGATCAGTAATAATTCAATAAAGCACTTAAAGTAATTTTTCATGTAAAAAAAAAAAAAAAA      ]
[+] EMBL AU070179             [                                                                                                                                                                                                                                                              ATNTNGANGAAGGGAGGTGATCTGAGTTATNTCGGATTCACAGNAGATGGCGCACAGTGGTTAGTTGACAACACTGACATCAAGCTACTTGGTATTGACTATCTATCAGTTGCAGCATATGATCACTTGATCACTGCCCATGTGGTCTTTTNCAAATTCCCGAA TATCANCCTANTCGAAG                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU181362             [                                                                                                                                                                                                                                                                                                           GATGGCGCACAGTGGTTAGTTGACAACACTGACATCAAGCTAGTTGGTATTGACTATCTATCAGTTGCAGCATATGATCACTTGATCACTGCCCATGTGGTCTTTTTCAAATTCCCGAA TATCATCCTAGTCGAAGGCCTGAAGCTAGACGATGTCAAGGCTGGAATCTACATGCTGCATTGCTTACCTCTGAGGCTGGTTGGATCCGAGGGCTCACCAATCAGGTGCATCCTGATCAAGTGATTGCTTCATCACTGCTCCTGATAATGGCGACACTGCAGATCATGCCATCTGATGCTGCTACATCCTGGCTGAGGCCTTGAGAGTGCCAAGGCCAGCTCAGTAGAAAAACAATAATAAGTGTAAAC GTATATATATCGTTTGTTTGATCAGTAATAATTCAATAAAGCACTTAAAGTAATTTTTCATGTAAAAAA                ]
[+] EMBL AU173405             [                                                                                                                                                                                                                                                                                                                     AGTGGTTAGTTGNCAACACTGACATCAAGCTAGTTGGTATTGACTATCTATCAGTTGCAGCATATGATCACTTGATCACTGCCCATGTGGTCTTTTTCAAATTCCCGAA TATCATCCTAGTCGAAGGCCTGAAGCTAGACGATGTCAAGGCTGGAATCTACATGCTGCATTGCTTACCTCTGAGGCTGGTTGGATCCGAGGGCTCACCAATCAGGTGCATCCTGATCAAGTGATTGCTTCATCACTGCTCCTGATAATGGCGACACTGCAGATCATGCCATCTGATGCTGCTACATCCTGGCTGAGGCCTTGAGAGTGCCAAGGCCAGCTCAGTAGAAAAACAATAATAAGTGTAAACGGTATATATATCGTTTGTTTGATCAGTAATAATTCAATAAAGCACTTAAAGTAATTTTTCAAAAAAAA                  ]
[+] EMBL CF309814             [                                                                                                                                                                                                                                                                                                                                                                                             TGATCACTGCCCATGTGGTCTTTTTCAAATTCCCGAA TATCATCCTAGTCGAAGGCCTGAAGCTAGACGATGTCAAGGCTGGAATCTACATGCTGCATTGCTTACCTCTGAGGCTGGTTGGATCCGAGGGCTCACCAATCAGGTGCATCCTGATCAAGTGATTGCTTCATCACTGCTCCTGATAATGGCGACACTGCAGATCATGCCATCTGATGCTGCTACATCCTGGCTGAGGCCTTGAGAGTGCCAAGGCCAGCTCAGTAGAAAAACAATAATAAGTGTAAAC GTATATATATCGTTTGTTTGATCAGTAATAATTCAATAAAGCACTTAAAG      TNNAAAAAAAAAAAAAAAAAAAAAAAAA ]
[-] EMBL CF309813             [                                                                                                                                                                                                                                                                                                                                                                                              GATCACTGCCCATGTGGTTTTTTTCAAATTCCCGAA TATCATCCTAGTCGAAGGCCTGAAGCTAGACGATGTCAAGGCTGGAATTTACATGCTGCATTGCTTACCTTTGAGGCTGGTTGGATCCGAGGGCTCACCAATCAGGTGCATCCTGATCAAGTGATTGCTTCATCACTGCTCCTGATAATGGCGACACTGCAGATCATGCCATTTGATGCTGCTACATCCTGGCTGAGGCCTTGAGAGTGCCAAGGCCAGCTCAGTAGAAAAACAATAATAAGTGTAAAC GTATATATATCGTTTGTTTGATCAGGAATAATTCAATAAAGCCCTTAAAGTAA      AAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_14106#1 CTACAACCTGTCGGAGCTAAGATGGAGTGCCACATGGGCACCCACGTCGACGCGCCGGGC CACATGAACCAGGGCCACTTCGCCGCCGGCCTCGACGTCGACAAGCTCGACCTCGACCTC CTCAACGGTCCTACATTATTGGTTGATACTCCAAGAAACACAAATATAACAGCTAAAGCA ATGGAGTCGTTAAATATACCAAAAGGTGTTCGTCGAGTTCTTTTCAGGACATTGAACACA GATAGGAAGCTCATGTGGAAGAAGGGAGGTGATCTGAGTTATGTCGGATTCACAGAAGAT GGCGCACAGTGGTTAGTTGACAACACTGACATCAAGCTAGTTGGTATTGACTATCTATCA GTTGCAGCATATGATCACTTGATCACTGCCCATGTGGTCTTTTTCAAATTCCCGAATATC ATCCTAGTCGAAGGCCTGAAGCTAGACGATGTCAAGGCTGGAATCTACATGCTGCATTGC TTACCTCTGAGGCTGGTTGGATCCGAGGGCTCACCAATCAGGTGCATCCTGATCAAGTGA TTGCTTCATCACTGCTCCTGATAATGGCGACACTGCAGATCATGCCATCTGATGCTGCTA CATCCTGGCTGAGGCCTTGAGAGTGCCAAGGCCAGCTCAGTAGAAAAACAATAATAAGTG TAAACGTATATATATCGTTTGTTTGATCAGTAATAATTCAATAAAGCACTTAAAGTAATT TTTCAAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_14106#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 280
fasta sequence
                              [TCCTAATATCTGCTGCATTTTTACATGAAAAATTACTTTAAGTGCTTTATTGAATTATTACTGATCAAACAAACGATATATATACGTTTACACTTATTATTGTTTTTCTACTGAGCTGGCCTTGGCACTCTCAAGGCCTCAGCCAGGATGTAGCAGCATCAGATGGCATGATCTGCAGTGTCGCCATTATCAGGAGCAGTGATGAAGCAATCACTTGATCAGGATGCACCTGATTGGTGAGCCCTCGGATCAGCGGCCGCGAATTCGCGGCCGCTAGCGG]

[+] EMBL AU225465             [TCCTAATATCTGCTGCATTTTTACATGAAAAATTACTTTAAGTGCTTTATTGAATTATTACTGATCAAACAAACGATATATATACGTTTACACTTATTATTGTTTTTCTACTGAGCTGGCCTTGGCACTCTCAAGGCCTCAGCCAGGATGTAGCAGCATCAGATGGCATGATCTGCAGTGTCGCCATTATCAGGAGCAGTGATGAAGCAATCACTTGATCAGGATGCACCTGATTGGTGAGCCCTCGGATCAGCGGCCGCGAATTCGCGGCCGCTAGCGG]


>consensus_14106#2 TCCTAATATCTGCTGCATTTTTACATGAAAAATTACTTTAAGTGCTTTATTGAATTATTA CTGATCAAACAAACGATATATATACGTTTACACTTATTATTGTTTTTCTACTGAGCTGGC CTTGGCACTCTCAAGGCCTCAGCCAGGATGTAGCAGCATCAGATGGCATGATCTGCAGTG TCGCCATTATCAGGAGCAGTGATGAAGCAATCACTTGATCAGGATGCACCTGATTGGTGA GCCCTCGGATCAGCGGCCGCGAATTCGCGGCCGCTAGCGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14106#0      ------------------------------------------------------CCGGCC 6
consensus_14106#1      CTACAACCTGTCGGAGCTAAGATGGAGTGCCACATGGGCACCCACGTCGACGCGCCGGGC 60
consensus_14106#2      ------------------------------------------------------------
                                                                                   

consensus_14106#0      CACATGAACCCGGCCCACTTCGCCCCCGCCTCGGACGTTCGGACAAGCTCGACCTCGGAC 66
consensus_14106#1      CACATGAACCAGGGCCACTTCGCCGCCGGCCTCGACGTC--GACAAGCTCGACCTCG-AC 117
consensus_14106#2      ---------------------------------------------------TCCTAATAT 9
                                                                           ***   * 

consensus_14106#0      CTCCCTCCAACGGTCCTACATTATTGGGTTGA-TACTCCAAGAAACACAAATATAACAGC 125
consensus_14106#1      CTCC--TCAACGGTCCTACATTATTGG-TTGA-TACTCCAAGAAACACAAATATAACAGC 173
consensus_14106#2      CTGCTGCATTTTTACATGAAAAATTACTTTAAGTGCTTTATTGAATTATTACTGATCAAA 69
                       ** *          * *  *  ***   ** * * **  *   **     *   * **  

consensus_14106#0      TAAAAGCAATGGAGTCGTTTAAATATACCAAAAGGTGTTCGTCGAGTTCTTTTCAGGACA 185
consensus_14106#1      TAAA-GCAATGGAGTCGTT-AAATATACCAAAAGGTGTTCGTCGAGTTCTTTTCAGGACA 231
consensus_14106#2      CAAACGATATATATACGTTTACACTTATTATTGTTTTTCTACTGAGCTGGCCTTGGCACT 129
                        *** *  **  *  **** * *  **  *     * *     *** *    *  * ** 

consensus_14106#0      TTGAA---CACAGATAGGAAGCTCATGTGGAAGAAGGGAGGTGATCTGAGTTATGTCGGA 242
consensus_14106#1      TTGAA---CACAGATAGGAAGCTCATGTGGAAGAAGGGAGGTGATCTGAGTTATGTCGGA 288
consensus_14106#2      CTCAAGGCCTCAGCCAGGATGTAGCAGCATCAGATGGCA--TGATCT--GCAGTGTCGCC 185
                        * **   * ***  **** *     *    *** ** *  ******  *   *****  

consensus_14106#0      TTCACAGATAGATGGTTGCACAGTGGTTAGTCGATATACACTGTGAACATCAAAGCTTAG 302
consensus_14106#1      TTCACAGA-AGATGGC-GCACAGTGGTTAGTTGACA-ACACTG---ACATCAAG--CTAG 340
consensus_14106#2      ATTATCAG-GAGCAGTGATGAAGCAATCACTTGATC-AGGATG----CACC------TGA 233
                        * *          *      **   * * * **   *   **    ** *      *  

consensus_14106#0      TTTGGTTAATTTGACTATCCTGAATCAAGTTTGGCCAAGGCCATTAATGGATT-CAACCT 361
consensus_14106#1      TTGG--TA--TTGACTATCT---ATCAGTTGCAGC--ATATGATCACTTGATCACTGCCC 391
consensus_14106#2      TTGG------TGAGCCCTCG--GATCAGCGGCCGC--GAATTCGCGGCCGCTAGCGG--- 280
                       ** *      *   *  **    ****      **              * *  *     

consensus_14106#0      TTTGGAATTCCACCTGGCCCCCCATTGTTGGGTTCCTTTTTGTCCAAAAAGAATTCCCCC 421
consensus_14106#1      ATGTGGTCTTTTTCAAATTCCCGAATATCATCCTAGTCGAAGGCCTGAAGCTAGACGATG 451
consensus_14106#2      ------------------------------------------------------------
                                                                                   

consensus_14106#0      CGGAAAATTAATTCCAATTCCCCTTAAGGTTCCGGAAAAGGGCCCCTTGGAAAGGCCTTA 481
consensus_14106#1      TCAAGGCTGGAATCTACATGCTGCATTGCTTACCTCTGAGG-----CTGGTTGGATCCGA 506
consensus_14106#2      ------------------------------------------------------------
                                                                                   

consensus_14106#0      AGGAACCGGAATTGGTTCAAAGGCCTTGGGGAAATTCCTTAACCAATTGCGTTGCCATGT 541
consensus_14106#1      GGGCTCACCAATCAGGTGCATCCTGATCAAGTGATTGCTTCATCACTGCTCCTG--ATAA 564
consensus_14106#2      ------------------------------------------------------------
                                                                                   

consensus_14106#0      TGGCCTTTAACCCTTCCTTGGAAGCCTTGGTTTGGAATTCCCCGGAAGGGGCCTTCCAAC 601
consensus_14106#1      TGGCGACACTGCAGATCATGCCA-TCTGATGCTGCTACATCCTGGCTGAGGCCTTGAGA- 622
consensus_14106#2      ------------------------------------------------------------
                                                                                   

consensus_14106#0      CCAAATTCCAAGGGTTGACCAATCCCTTGGAATTCCAAGTGGAATGTGGCCTTTCCAATC 661
consensus_14106#1      ----GTGCCAAGG-----CCAGCTCAGTAGAAAAACAA-TAATAAGTGTAAACGTATATA 672
consensus_14106#2      ------------------------------------------------------------
                                                                                   

consensus_14106#0      CACCGTGGCCTTCCCTTGGATTAAATTGGCCGAACCACCTTGCCAAGAATTCCAATGCCA 721
consensus_14106#1      TATCGTTTGTTTGATCAGTAATAA-TTCAATAAAGCACTTAAAGTAATTTTTCAAAAAAA 731
consensus_14106#2      ------------------------------------------------------------
                                                                                   

consensus_14106#0      TTCTTAATGCCTTGCTAACCATCCTGGCTGGAAGGCCCTGGAGGAATTCCCAAGCCCAGG 781
consensus_14106#1      AAAAAAAAAAAAAAAAAAA----------------------------------------- 750
consensus_14106#2      ------------------------------------------------------------
                                                                                   

consensus_14106#0      CCTCCGTTAGAAAACCATTAATAAGGGTAAACCGAAAATATATTTGTTGAACCGTAATAA 841
consensus_14106#1      ------------------------------------------------------------
consensus_14106#2      ------------------------------------------------------------
                                                                                   

consensus_14106#0      TCCAATAAACCCCTTAAAGTAATTTTCCAGTAA 874
consensus_14106#1      ---------------------------------
consensus_14106#2      ---------------------------------
                                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)