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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14107#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 2337 fasta sequence
[CCTCACCCTCCTTCCTCTTCACTCTCACGAGACAGCTTCCCACGCAGCGCAGCGCAACCGCAGCAATGGCCGATTCGCCAAACCCTAGCTCCGGTGACCACCCCGCGGGCGTCGGCGGGTCGCCGGAGAAGCAGCCCCCGGTGGATCGGCGCGTCGCGGCGCTCGCCGCGGGCGCGGCGGGCGCGGGGGCGAGGTACAAGGCGATGTCCCCCGCGCGGCTGCCGATCTCGCGGGAGCCCTGCCTCACCATCCCCGCGGGCTTCAGCCCCTCGGCTCTCCTCGAGTCCCCCGTCCTCCTCACCAACTTCAAGGTTGAACCCTCTCCGACAACTGGTACTCTGAGCATGGCTGCAATTATGAACAAGAGTGCAAATCCAGACATACTTCCTTCGCCTAGGGATAAAACATCTGGTAGCACCCATGAAGATGGTGGCTCTCGAGATTTTGAATTCAAGCCTCATCTGAATTCATCCTCTCAATCGAC-GGCTTCTGCTATCAATGATCCCAAAAAGCATGAAACTTCTATGAAAAATGAAAGCCTGAATACTGCCCTGTCATCTGACGATATG-ATGATCGACAATATACCTCTATGTTCTCGTGAGTCAACTCTCGCAGTCAATATTTCAAGTGCCCCGAGCCAACTGGTTGGAATGGTTGGTTTAACTGACAGCTCACCTGCTGAAGTTGGTACATCTGAGTTGCATCAGATGAATAGCTCTGGAAATGCTATGCAGGAGTCACAGCCTGAAAGTGTGGCTGAAAAGTCTGCAGAGGATGGTTATAACTGGCGCAAATATGGGCAAAAGCATGTTAAGGGAAGTGAGAACCCGAGAAGCTATTACAAGTGCACACATCCTAACTGTGATGTAAAAAAGCTATTGGAGCGTTCGCTTGATGGTCAGATTACTGAAGTGGTTTATAAAGGGCGTCACAATCACCCTAAGCCCCAACCCAATAGGAGGCTGTCTGCCGGTGCAGTTCCTCCAATCCAGGGTGAAGAAAGATATGATGGTGTGGCAACTACTGATGACAAATCTTCAAATGTTCTTAGCATTCTTGGTAATGCAGTACATACAGCTGGTATGATTGAGCCTGTTCCAGGCTCAGCTAGTGATGATGACAATGATGCCGGAGGAGGGAGACCTTACCCTGGAGATGATGCTGTTGAGGATGATGATTTAGAGTCAAAACGAAGGAAAATGGAATCTGCTGCTATTGATGCTGCTTTGATGGGCAAGCCTAACCGTGAGCCTCGTGTTGTAGTACAAACGGTTAGTGAGGTTGACATCTTGGATGATGGGTACCGCTGGCGCAAGTATGGCCAGAAAGTAGTTAAAGGAAACCCCAATCCACGGAGTTACTACAAGTGCACAAATACAGGATGCCCAGTCAGGAAGCATGTTGAGAGAGCATCACATGATCCAAAATCAGTCATAACAACATATGAAGGAAAACATAACCATGAAGTCCCTGCGTCGAGGAATGCGAGCCATGAGATGTCCACTCCCCCCATGAAGCCTGTTGTCCATCCAATTAACAGCAATATGCAGGGCCTTGGTGGCATGATGAGAGCATGTGAACCTAGGACATTTCCAAACCAATATTCTCAAGCAGCTGAAAGTGACACCATCAGCCTTGATCTTGGTGTTGGAATCAGCCCGAACCACAGCGATGCCACAAACCAATTGCAGTCCTCAGTTTCTGATCAGATGCAGTATCAAATGCAGCCCATGGGTTCAGTATACAGTAATATGGGACTTCCAGCAATGGCAATGCCGACTATGGCTGGCAATGCAGCTAGCAATATATATGGTTCGAGAGAAGAAAAACCTAGTGAAGGTTTTACTTTCAAAGCCACACCGATGGACCATTCGGCTAACTTATGCTACAGTACCGCCGGCAATTTAGTCATGGGTCCGTGAGAGTCTATACTAATGCTTATAGCTCGAGAATCATATATTACCAATGCTTCGTATT--GA-CATT-CTC-TTCAGAAAGATGCTCCTATCATTGACACATCAGTTGAACCGGAGGCGAGAGCTGTACCT-GTGGGCTGCAGCAAAATACACCACATGGGTCTTCTGGAGCGGCAAAGGCCTTGTTGTATACTTGTATGTGGCACTGGCCCTATATTCG-TTGT-ACAGTGAACCCG-TTAAGATTAATTAGATCAT-CAGAATTTGGTTTTCTTTAACTATCTTCGCCTTCAGTGGAATGTGGATAGAACATGGATTATGGTTGATTTGGTTTTGTGAGCTTGTCTAATTCTCTTTTGTGACAAAGCTTTGTATCTCACTGCATATGTACAATGCCGTTGGCAGTAAAGATATGCAAATGTGATAC]
[+] EMBL AY341850 [CCTCACCCTCCTTCCTCTTCACTCTCACGAGACAGCTTCCCACGCAGCGCAGCGCAACCGCAGCAATGGCCGATTCGCCAAACCCTAGCTCCGGTGACCACCCCGCGGGCGTCGGCGGGTCGCCGGAGAAGCAGCCCCCGGTGGATCGGCGCGTCGCGGCGCTCGCCGCGGGCGCGGCGGGCGCGGGGGCGAGGTACAAGGCGATGTCCCCCGCGCGGCTGCCGATCTCGCGGGAGCCCTGCCTCACCATCCCCGCGGGCTTCAGCCCCTCGGCTCTCCTCGAGTCCCCCGTCCTCCTCACCAACTTCAAGGTTGAACCCTCTCCGACAACTGGTACTCTGAGCATGGCTGCAATTATGAACAAGAGTGCAAATCCAGACATACTTCCTTCGCCTAGGGATAAAACATCTGGTAGCACCCATGAAGATGGTGGCTCTCGAGATTTTGAATTCAAGCCTCATCTGAATTCATCCTCTCAATCGAC GGCTTCTGCTATCAATGATCCCAAAAAGCATGAAACTTCTATGAAAAATGAAAGCCTGAATACTGCCCTGTCATCTGACGATATG ATGATCGACAATATACCTCTATGTTCTCGTGAGTCAACTCTCGCAGTCAATATTTCAAGTGCCCCGAGCCAACTGGTTGGAATGGTTGGTTTAACTGACAGCTCACCTGCTGAAGTTGGTACATCTGAGTTGCATCAGATGAATAGCTCTGGAAATGCTATGCAGGAGTCACAGCCTGAAAGTGTGGCTGAAAAGTCTGCAGAGGATGGTTATAACTGGCGCAAATATGGGCAAAAGCATGTTAAGGGAAGTGAGAACCCGAGAAGCTATTACAAGTGCACACATCCTAACTGTGATGTAAAAAAGCTATTGGAGCGTTCGCTTGATGGTCAGATTACTGAAGTGGTTTATAAAGGGCGTCACAATCACCCTAAGCCCCAACCCAATAGGAGGCTGTCTGCCGGTGCAGTTCCTCCAATCCAGGGTGAAGAAAGATATGATGGTGTGGCAACTACTGATGACAAATCTTCAAATGTTCTTAGCATTCTTGGTAATGCAGTACATACAGCTGGTATGATTGAGCCTGTTCCAGGCTCAGCTAGTGATGATGACAATGATGCCGGAGGAGGGAGACCTTACCCTGGAGATGATGCTGTTGAGGATGATGATTTAGAGTCAAAACGAAGGAAAATGGAATCTGCTGCTATTGATGCTGCTTTGATGGGCAAGCCTAACCGTGAGCCTCGTGTTGTAGTACAAACGGTTAGTGAGGTTGACATCTTGGATGATGGGTACCGCTGGCGCAAGTATGGCCAGAAAGTAGTTAAAGGAAACCCCAATCCACGGAGTTACTACAAGTGCACAAATACAGGATGCCCAGTCAGGAAGCATGTTGAGAGAGCATCACATGATCCAAAATCAGTCATAACAACATATGAAGGAAAACATAACCATGAAGTCCCTGCGTCGAGGAATGCGAGCCATGAGATGTCCACTCCCCCCATGAAGCCTGTTGTCCATCCAATTAACAGCAATATGCAGGGCCTTGGTGGCATGATGAGAGCATGTGAACCTAGGACATTTCCAAACCAATATTCTCAAGCAGCTGAAAGTGACACCATCAGCCTTGATCTTGGTGTTGGAATCAGCCCGAACCACAGCGATGCCACAAACCAATTGCAGTCCTCAGTTTCTGATCAGATGCAGTATCAAATGCAGCCCATGGGTTCAGTATACAGTAATATGGGACTTCCAGCAATGGCAATGCCGACTATGGCTGGCAATGCAGCTAGCAATATATATGGTTCGAGAGAAGAAAAACCTAGTGAAGGTTTTACTTTCAAAGCCACACCGATGGACCATTCGGCTAACTTATGCTACAGTACCGCCGGCAATTTAGTCATGGGTCCGTGAGAGTCTATACTAATGCTTATAGCTCGAGAATCATATATT CCAATGCTTCGTATT GA CATT CTC TTCAGAAAGATGCTCCTATCATTGACACATCAGTTGAACCGGAGGCGAGAGCTGTACCT GTGGG ]
[+] EMBL AK070537 [ GAGACAGCTTCCCACGCAGCGCAGCGCAACCGCAGCAATGGCCGATTCGCCAAACCCTAGCTCCGGTGACCACCCCGCGGGCGTCGGCGGGTCGCCGGAGAAGCAGCCCCCGGTGGATCGGCGCGTCGCGGCGCTCGCCGCGGGCGCGGCGGGCGCGGGGGCGAGGTACAAGGCGATGTCCCCCGCGCGGCTGCCGATCTCGCGGGAGCCCTGCCTCACCATCCCCGCGGGCTTCAGCCCCTCGGCTCTCCTCGAGTCCCCCGTCCTCCTCACCAACTTCAAGGTTGAACCCTCTCCGACAACTGGTACTCTGAGCATGGCTGCAATTATGAACAAGAGTGCAAATCCAGACATACTTCCTTCGCCTAGGGATAAAACATCTGGTAGCACCCATGAAGATGGTGGCTCTCGAGATTTTGAATTCAAGCCTCATCTGAATTCATCCTCTCAATCGAC GGCTTCTGCTATCAATGATCCCAAAAAGCATGAAACTTCTATGAAAAATGAAAGCCTGAATACTGCCCTGTCATCTGACGATATG ATGATCGACAATATACCTCTATGTTCTCGTGAGTCAACTCTCGCAGTCAATATTTCAAGTGCCCCGAGCCAACTGGTTGGAATGGTTGGTTTAACTGACAGCTCACCTGCTGAAGTTGGTACATCTGAGTTGCATCAGATGAATAGCTCTGGAAATGCTATGCAGGAGTCACAGCCTGAAAGTGTGGCTGAAAAGTCTGCAGAGGATGGTTATAACTGGCGCAAATATGGGCAAAAGCATGTTAAGGGAAGTGAGAACCCGAGAAGCTATTACAAGTGCACACATCCTAACTGTGATGTAAAAAAGCTATTGGAGCGTTCGCTTGATGGTCAGATTACTGAAGTGGTTTATAAAGGGCGTCACAATCACCCTAAGCCCCAACCCAATAGGAGGCTGTCTGCCGGTGCAGTTCCTCCAATCCAGGGTGAAGAAAGATATGATGGTGTGGCAACTACTGATGACAAATCTTCAAATGTTCTTAGCATTCTTGGTAATGCAGTACATACAGCTGGTATGATTGAGCCTGTTCCAGGCTCAGCTAGTGATGATGACAATGATGCCGGAGGAGGGAGACCTTACCCTGGAGATGATGCTGTTGAGGATGATGATTTAGAGTCAAAACGAAGGAAAATGGAATCTGCTGCTATTGATGCTGCTTTGATGGGCAAGCCTAACCGTGAGCCTCGTGTTGTAGTACAAACGGTTAGTGAGGTTGACATCTTGGATGATGGGTACCGCTGGCGCAAGTATGGCCAGAAAGTAGTTAAAGGAAACCCCAATCCACGGAGTTACTACAAGTGCACAAATACAGGATGCCCAGTCAGGAAGCATGTTGAGAGAGCATCACATGATCCAAAATCAGTCATAACAACATATGAAGGAAAACATAACCATGAAGTCCCTGCGTCGAGGAATGCGAGCCATGAGATGTCCACTCCCCCCATGAAGCCTGTTGTCCATCCAATTAACAGCAATATGCAGGGCCTTGGTGGCATGATGAGAGCATGTGAACCTAGGACATTTCCAAACCAATATTCTCAAGCAGCTGAAAGTGACACCATCAGCCTTGATCTTGGTGTTGGAATCAGCCCGAACCACAGCGATGCCACAAACCAATTGCAGTCCTCAGTTTCTGATCAGATGCAGTATCAAATGCAGCCCATGGGTTCAGTATACAGTAATATGGGACTTCCAGCAATGGCAATGCCGACTATGGCTGGCAATGCAGCTAGCAATATATATGGTTCGAGAGAAGAAAAACCTAGTGAAGGTTTTACTTTCAAAGCCACACCGATGGACCATTCGGCTAACTTATGCTACAGTACCGCCGGCAATTTAGTCATGGGTCCGTGAGAGTCTATACTAATGCTTATAGCTCGAGAATCATATATTACCAATGCTTCGTATT GA CATT CTC TTCAGAAAGATGCTCCTATCATTGACACATCAGTTGAACCGGAGGCGAGAGCTGTACCT GTGGGCTGCAGCAAAATACACCACATGGGTCTTCTGGAGCGGCAAAGGCCTTGTTGTATACTTGTATGTGGCACTGGCCCTATATTCG TTGT ACAGTGAACCCG TTAAGATTAATTAGATCAT CAGAATTTGGTTTTCTTTAACTATCTTCGCCTTCAGTGGAATGTGGATAGAACATGGATTATGGTTGATTTGGTTTTGTGAGCTTGTCTAATTCTCTTTTGTGACAAAGCTTTGTATCTCACTGCATATGTACAATGCCGTTGGCAGTAAAGATATGCAAATGTGATAC]
[+] EMBL CB639821 [ GCCGATTCGCCAAACCCTAGCTCCGGTGACCACCCCGCGGGCGTCGGCGGGTCGCCGGAGAAGCAGCCCCCGGTGGATCGGCGCGTCGCGGCGCTCGCCGCGGGCGCGGCGGGCGCGGGGGCGAGGTACAAGGCGATGTCCCCCGCGCGGCTGCCGATCTCGCGGGAGCCCTGCCTCACCATCCCCGCGGGCTTCAGCCCCTCGGCTCTCCTCGAGTCCCCCGTCCTCCTCACCAACTTCAAGGTTGAACCCTCTCCGACAACTGGTACTCTGAGCATGGCTGCAATTATGAACAAGAGTGCAAATCCAGACATACTTCCTTCGCCTAGGGATAAAACATCTGGTAGCACCCATGAAGATGGTGGCTCTCGAGATTTTGAATTCAAGCCTCATCTGAATTCATCCTCTCAATCGAC GGCTTCTGCTATCAATGATCCCAAAAAGCATGAAACTTCTATGAAAAATGAAAGCCTGAATACTGCCCTGTCATCTGACGATATGNATGATCGACAATATACCTCTATGTTCTCGTGAGTCAACTCTCGCAGTCAATATTTC ]
[+] EMBL CB639823 [ GCCGATTCGCCAAACCCTAGCTCCGGTGACCACCCCGCGGGCGTCGGCGGGTCGCCGGAGAAGCAGCCCCCGGTGGATCGGCGCGTCGCGGCGCTCGCCGCGGGCGCGGCGGGCGCGGGGGCGAGGTACAAGGCGATGTCCCCCGCGCGGCTGCCGATCTCGCGGGAGCCCTGCCTCACCATCCCCGCGGGCTTCAGCCCCTCGGCTCTCCTCGAGTCCCCCGTCCTCCTCACCAACTTCAAGGTTGAACCCTCTCCGACAACTGGTACTCTGAGCATGGCTGCAATTATGAACAAGAGTGCAAATCCAGACATACTTCCTTCGCCTAGGGATAAAACATCTGGTAGCACCCATGAAGATGGTGGCTCTCGAGATTTTGAATTCAAGCCTCATCTGAATTCATCCTCTCAATCGAC GGCTTCTGCTATCAATGATCCCAAAAAGCATGAAACTTCTATGAAAAATGAAAGCCTGAATACTGCCCTGTCATCTGACGATATG ATGATCGACAATATACCTCTATGTTCTCGTGAGTCAACTCTCGCAGTCAATATTTCAAGTGCCCCGAGCCAACTGGTTGGAATGGTTGGTTTAACTGACAGC ]
[+] EMBL OSS3329A [ gcgcgGCGGGAG CCTGCCTCACCATCCCCGCGGGCTTCAGCCCCTCGGCTCTCCTCGAGTCCCCCGTGCTCCTCACCAACTTCAAGGTTGAACCCTCTCCGACAACTGNNACTCTGAGCATGGCTGCAATTATGAACAAGAGTGCAAATCCAGACATACTTCCTNCGNCTAGGGATAAAACATCTGGTAGCACCCATGAAGATGGTGGCTCTCGAGATTTTGAATTCAAGNCTCATCTGAATTCATCCTCTCAATC ]
[+] EMBL OSS2838A [ gcgcgGCGGGAG CCTGCNTCACCATCCCCGCGGGCTTNAGCCCCTCGGCTCTCCTCGAGTCCCCCGTCCTCCTCACCAACTTCAAGGTTGAACCCTCTCCGACAACTGGTACTCTGAGCATGGCTGCAATTATGAACAAGAGTGCAAATCCAGACATACTTCCTTCGCCTAGGGATAAAACATCTGGTAGCACCCATGAAGATGGTGGCTCTCGAGATTTTGAATTCAAGCCTCATCTGAATTCATCCTCTCAATCGACGGGNTTCTGCTATCAATGATCCCAAAAAGCATGAAACTTCTATGAAAAATGAAAGCCTGAATA ]
[+] EMBL OSS3271A [ ncgcgGCGGGAG CCTGCCTCACCATCCCCGCGGGCTTCAGCCCCTCGGCTCTCCTCGAGTCCCCCGTCCTCCTCACCAACTTCAAGGTTGAACCCTCTCCGACANCTGGTACTCTGAGCATGGCTGCANTTATGAACAAGAGTGCAAATCCAGACATACTTCCTTCGACTAGGGATAAAACATCTGGTAGCACCCATGAAGATGGTGGCTCTCGAGATTT ]
[+] EMBL CB672946 [ ATGAAAAATGAAAGCCTGAATACTGCCCTGTCATCTGACGATATG ATGATCGACAATATACCTCTATGTTCTCGTGAGTCAACTCTCGCAGTCAATATTTCAAGTGCCCCGAGCCAACTGGTTGGAATGGTTGGTTTAACTGACAGCTCACCTGCTGAAGTTGGTACATCTGAGTTGCATCAGATGAATAGCTCTGGAAATGCTATGCAGGAGTCACAGCCTGAAAGTGTGGCTGAAAAGTCTGCAGAGGATGGTTATAACTGGCGCAAATATGGGCAAAAGCATGTTAAGGGAAGTGAGAACCCGAGAAGCTATTACAAGTGCACACATCCTAACTGTGATGTAAAAAAGCTATTGGAGCGTTCGCTTGATGGTCAGATTACTGAAGTGGTTTATAAAGGGCGTCACAATCACCCTAAGCCCCAACCCAATAGGAGGCTGTCTGCCGGTGCAGTTCCTCCAATCCAGGGTGAAGAAAGATATGATGGTGTGGCAACTACTGATGACAAATCTTCAAATGTTCTTAGCATTCTTGGTAATGCAGTACATACAGCTGGTATGATTGAGCCTGTTCCAGGCTCAGCTAGTGATGATGACAATGATGCCGGAGGAGGGAGACCTTACCCTGGAGATGATGCTGTTGAGGATGATGATTTAGAGTCAAAACGAAGGAAAATGGAATCTGCTGCTATTGATGCTGCTTTGATGGGCAAGCCTAACCGTGAGCCTCGTGTTGTAGTACAAACGGTTAGTGAGGTTGACAT ]
[+] EMBL CB681461 [ ATTGGACCGTTCGCTTGATGGTCAGATTACTGAAGTGGTTTATAAAGGGCGTCACAATCACCCTAAGCCCCAACCCAATAGGAGGCTGTCTGCCGGTGCAGTTCCTCCAATCCAGGGTGAAGAAAGATATGATGGTGTGGCAACTACTGATGACAAATCTTCAAATGTTCTTAGCATTCTTGGTAATGCAGTACATACAGCTGGTATGATTGAGCCTGTTCCAGGCTCAGCTAGTGATGATGACAATGATGCCGGAGGAGGGAGACCTTACCCTGGAGATGATGCTGTTGAGGATGATGATTTAGAGTCAAAACGAAGGAAAATGGAATCTGCTGCTATTGATGCTGCTTTGATGGGCAAGCCTAACCGTGAGCCTCGTGTTGTAGTACAAACGGTTAGTGAGGTTGACATCTTGGATGATGGGTACCGCTGGCGCAAGTATGGCCAGAAAGTAGTTAAAGGAAACCCCAATCCACGGAGTTACTACAAGTGCACAAATACAGGATGCCCAGTCAGGAAGCATGTTGAGAGAGCATCACATGATCCAAAATCAGTCATAACAACATATGAAGGAAAACATAACCATGAAGTCCCTGCGTCGAGGAATGCGAGCCATGAGATGTCCACTCCCCCCATGAAGCCTGTTGTCCATCCAATTAACAGCAATATGCAGGGCCTTGGTGGCATGATGAGAGCATGTGAACCTANGACATTTCCAAACCAATATTCTCAAGCAGCTGAAAGTGACACCATCAGCCTTGATCTTGGTGTTGGAATCAGCCCGAACCACAGCGATGCCACAAACCAATTGCAGTCCTCAGTTTCTGATCAGATGCA ]
[+] EMBL AY324393 [ GATGGTCAGATTACTGAAGTGGTTTATAAAGGGCGTCACAATCACCCTAAGCCCCAACCCAATAGGAGGCTGTCTGCCGGTGCAGTTCCTCCAATCCAGGGTGAAGAAAGATATGATGGTGTGGCAACTACTGATGACAAATCTTCAAATGTTCTTAGCATTCTTGGTAATGCAGTACATACAGCTGGTATGATTGAGCCTGTTCCAGGCTCAGCTAGTGATGATGACAATGATGCCGGAGGAGGGAGACCTTACCCTGGAGATGATGCTGTTGAGGATGATGATTTAGAGTCAAAACGAAGGAAAATGGAATCTGCTGCTATTGATGCTGCTTTGATGGGCAAGCCTAACCGTGAGCCTCGTGTTGTAGTACAAACGGTTAGTGAGGTTGACATCTTGGATGATGGGTACCGCTGGCGCAAGTATGGCCAGAAAGTAGTTAAAGGAAACCCCAATCCACGGAGTTACTACAAGTGCACAAATACAGGATGCCCAGTCAGGAAGCATGTTGAGAGAGCATCACATGATCCAAAATCAGTCATAACAA ]
[-] EMBL CB672947 [ ATGCCCAGTCAGGAAGCATGTTGAGAGAGCATCACATGATCCAAAATCAGTCATAACAACATATGAAGGAAAACATANCCATGAAGTCCCTGCGTCGAGGAATGCGAGCCATGAGATGTCCACTCCCCCCATGAAGCCTGTTGTCCATCCAATTAACAGCAATATGCAGGGCCTTGGTGGCATGATGAGAGCATGTGAACCTAGGACATTTCCAAACCAATATTCTCAAGCAGCTGAAAGTGACACCATCAGCCTTGATCTTGGTGTTGGAATCAGCCCGAACCACAGCGATGCCACAAACCAATTGCAGTCCTCAGTTTCTGATCAGATGCAGTATCAAATGCAGCCCATGGGTTCAGTATACAGTAATATGGGACTTCCAGCAATGGCAATGCCGACTATGGCTGGCAATGCAGCTAGCAATATATATGGTTCGAGAGAAGAAAAACCTAGTGAAGGTTTTACTTTCAAAGCCACACCGATGGACCATTCGGCTAACTTATGCTACAGTACCGCCGGCAATTTAGTCATGGGTCCGTGAGAGTCTATACTAATGCTTATAGCTCGAGAATCATATATTACCAATGCTTCGTATT GA CATT CTC TTCAGAAAGATGCTCCTATCATTGACACATCAGTTGAACCGGAGGCGAGAGCTGTACCT GTGGGCTGCAGCAAAATACACCACATGGGTCTTCTGGAGCGGCAAAGGCCTTGTTGTATACTTGTATGTGGCACTGGCCCTATATTCG TTGT ACAGTGAACCCG TTAAGATTAATTAGATCAT CAGAATTTGGTTTTC ]
[+] EMBL CA998226 [ AATGGCAATGCCGACTATGGCTGGCAATGCAGCTAGCAATATATATGGTTCGAGAGAAGAAAAACCTAGTGAAGGTTTTACTTTCAAAGCCACACCGATGGACCATTCGGCTAACTTATGCTACAGTACCGCCGGCAATTTAGTCATGGGTCCGTGAGAGTCTATACTAATGCTTATAGCTCGAGAATCATATATTACCAATGCTTCGTATT GA CATT CTC TTCAGAAAGATGCTCCTATCATTGACACATCAGTTGAACCGGAGGCGAGAGCTGTACCT GTGGGCTGCAGCAAAATACACCACATGGGTCTTCTGGAGCGGCAAAGGCCTTGTTGTATACTTGTATGTGGCACTGGCCCTATATTCG TTGT ACAGTGAACCCG TTAAGATTAATTAGATCAT CAGAATTTGGTTTTCTTTAACTATCTTCGCCTTCAGTGGAATGTGGATAGAACATGGATTATGGTTGATTTGGTTTTGTG ]
[+] EMBL D42861 [ tggcntcCGTATTTGGANCATTNCCCTTTCAGAAAGATGCTCCTATCATTGACACCTCAGTTGAACCGGAGGCGAGAGCTGTACCTGGTGGGCTCCAGCAAAATACACCACATGGGTCTTCTGGAGCGGCAAAGGCCTTGTTGTATACTTGAATTTGGCACTGGCCCTANNACCGTTTGTAACAGTGAACCCGTTTAAGATTAATTAGATCATACAGAATTTGGTTTTCTTTAACTATCTTCGCCTTCAGTGGAATGTGGATAGAACATGGATTATGGTTGATTT ]
consensusID : consensus_14107#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 814 fasta sequence
[ATGCCCAGTCAGGAAGCATGTTGAGAGAGCATCACATGATCCAAAATCAGTCATAACAACATATGAAGGAAAACATAACCATGAAGTCCCTGCGTCGAGGAATGCGAGCCATGAGATGTCCACTCCCCCCATGAAGCCTGTTGTCCATCCAATTAACAGCAATATGCAGGGCCTTGGTGGCATGATGAGAGCATGTGAACCTAGGACATTTCCAAACCAATATTCTCAAGCAGCTGAAAGTGACACCATCAGCCTTGATCTTGGTGTTGGAATCAGCCCGAACCACAGCGATGCCACAAACCAATTGCAGTCCTCAGTTTCTGATCAGATGCAGTATCAAATGCAGCCCATGGGTTCAGTATACAGTAATATGGGACTTCCAGCAATGGCAATGCCGACTATGGCTGGCAATGCAGCTAGCAATATATATGGTTCGAGAGAAGAAAAACCTAGTGAAGGTTTTACTTTCAAAGCCACACCGATGGACCATTCGGCTAACTTATGCTACAGTACCGCCGGCAATTTAGTCATGGGTCCGTGAGAGTCTATACTAATGCTTATAGCTCGAGAATCATATATTACCAATGCTTCGTATTGACATTCTCTTCAGAAAGATGCTCCTATCATTGACACATCAGTTGAACCGGAGGCGAGAGCTGTACCTGTGGGCTGCAGCAAAATACACCACATGGGTCTTCTGGAGCGGCAAAGGCCTTGTTGTATACTTGTATGTGGCACTGGCCCTATATTCGTTGTACAGTGAACCCGTAAGGATTAATTAGATCATCAGAATTTGGTTTTCTTCTTAAAGGAA]
[-] EMBL CB681462 [ATGCCCAGTCAGGAAGCATGTTGAGAGAGCATCACATGATCCAAAATCAGTCATAACAACATATGAAGGAAAACATAACCATGAAGTCCCTGCGTCGAGGAATGCGAGCCATGAGATGTCCACTCCCCCCATGAAGCCTGTTGTCCATCCAATTAACAGCAATATGCAGGGCCTTGGTGGCATGATGAGAGCATGTGAACCTAGGACATTTCCAAACCAATATTCTCAAGCAGCTGAAAGTGACACCATCAGCCTTGATCTTGGTGTTGGAATCAGCCCGAACCACAGCGATGCCACAAACCAATTGCAGTCCTCAGTTTCTGATCAGATGCAGTATCAAATGCAGCCCATGGGTTCAGTATACAGTAATATGGGACTTCCAGCAATGGCAATGCCGACTATGGCTGGCAATGCAGCTAGCAATATATATGGTTCGAGAGAAGAAAAACCTAGTGAAGGTTTTACTTTCAAAGCCACACCGATGGACCATTCGGCTAACTTATGCTACAGTACCGCCGGCAATTTAGTCATGGGTCCGTGAGAGTCTATACTAATGCTTATAGCTCGAGAATCATATATTACCAATGCTTCGTATTGACATTCTCTTCAGAAAGATGCTCCTATCATTGACACATCAGTTGAACCGGAGGCGAGAGCTGTACCTGTGGGCTGCAGCAAAATACACCACATGGGTCTTCTGGAGCGGCAAAGGCCTTGTTGTATACTTGTATGTGGCACTGGCCCTATATTCGTTGTACAGTGAACCCGTAAGGATTAATTAGATCATCAGAATTTGGTTTTCTTCTTAAAGGAA]
consensusID : consensus_14107#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 380 fasta sequence
[CCGGCTACAGTACCGCCGGCAATTTAGTCATGGGTCCGTGAGAGTCTATACTAATGCTTATAGCTCGAGAATCATATATTACCAGTGCTTCGTATTGACATTCTCTTCAGAAAGATGCTCCTATCATTGACACATCAGTTGAACCGGAGGCGAGAGCTGTACCTGTGGGCTGCAGCAAAATACACCACATGGGTCTTCTGGAGCGGCAAGGCCTTGTTGTATACTTGTATGTGGCACTGGCCCTATATTCGTTGTACAGTGAACCCGTTAAGATTAATTAGATCATCAGAATTTGGTTTTCTTTAACTATCTTCGCCTTCAGTGGAATGTGGATAGAACATGGATTATGGTTGATTTGGTTTTGTGAGCTAAAAAAAAAA]
[+] EMBL BM418897 [CCGGCTACAGTACCGCCGGCAATTTAGTCATGGGTCCGTGAGAGTCTATACTAATGCTTATAGCTCGAGAATCATATATTACCAGTGCTTCGTATTGACATTCTCTTCAGAAAGATGCTCCTATCATTGACACATCAGTTGAACCGGAGGCGAGAGCTGTACCTGTGGGCTGCAGCAAAATACACCACATGGGTCTTCTGGAGCGGCAAGGCCTTGTTGTATACTTGTATGTGGCACTGGCCCTATATTCGTTGTACAGTGAACCCGTTAAGATTAATTAGATCATCAGAATTTGGTTTTCTTTAACTATCTTCGCCTTCAGTGGAATGTGGATAGAACATGGATTATGGTTGATTTGGTTTTGTGAGCTAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14107#0 CCTCACCCTCCTTCCTCTTCACTCTCACGAGACAGCTTCCCACGCAGCGCAGCGCAACCG 60
consensus_14107#1 ------------------------------------------------------------
consensus_14107#2 ------------------------------------------------------------
consensus_14107#0 CAGCAATGGCCGATTCGCCAAACCCTAGCTCCGGTGACCACCCCGCGGGCGTCGGCGGGT 120
consensus_14107#1 ------------------------------------------------------------
consensus_14107#2 ------------------------------------------------------------
consensus_14107#0 CGCCGGAGAAGCAGCCCCCGGTGGATCGGCGCGTCGCGGCGCTCGCCGCGGGCGCGGCGG 180
consensus_14107#1 ------------------------------------------------------------
consensus_14107#2 ------------------------------------------------------------
consensus_14107#0 GCGCGGGGGCGAGGTACAAGGCGATGTCCCCCGCGCGGCTGCCGATCTCGCGGGAGCCCT 240
consensus_14107#1 ------------------------------------------------------------
consensus_14107#2 ------------------------------------------------------------
consensus_14107#0 GCCTCACCATCCCCGCGGGCTTCAGCCCCTCGGCTCTCCTCGAGTCCCCCGTCCTCCTCA 300
consensus_14107#1 ------------------------------------------------------------
consensus_14107#2 ------------------------------------------------------------
consensus_14107#0 CCAACTTCAAGGTTGAACCCTCTCCGACAACTGGTACTCTGAGCATGGCTGCAATTATGA 360
consensus_14107#1 ------------------------------------------------------------
consensus_14107#2 ------------------------------------------------------------
consensus_14107#0 ACAAGAGTGCAAATCCAGACATACTTCCTTCGCCTAGGGATAAAACATCTGGTAGCACCC 420
consensus_14107#1 ------------------------------------------------------------
consensus_14107#2 ------------------------------------------------------------
consensus_14107#0 ATGAAGATGGTGGCTCTCGAGATTTTGAATTCAAGCCTCATCTGAATTCATCCTCTCAAT 480
consensus_14107#1 ------------------------------------------------------------
consensus_14107#2 ------------------------------------------------------------
consensus_14107#0 CGACGGCTTCTGCTATCAATGATCCCAAAAAGCATGAAACTTCTATGAAAAATGAAAGCC 540
consensus_14107#1 ------------------------------------------------------------
consensus_14107#2 ------------------------------------------------------------
consensus_14107#0 TGAATACTGCCCTGTCATCTGACGATATGATGATCGACAATATACCTCTATGTTCTCGTG 600
consensus_14107#1 ------------------------------------------------------------
consensus_14107#2 ------------------------------------------------------------
consensus_14107#0 AGTCAACTCTCGCAGTCAATATTTCAAGTGCCCCGAGCCAACTGGTTGGAATGGTTGGTT 660
consensus_14107#1 ------------------------------------------------------------
consensus_14107#2 ------------------------------------------------------------
consensus_14107#0 TAACTGACAGCTCACCTGCTGAAGTTGGTACATCTGAGTTGCATCAGATGAATAGCTCTG 720
consensus_14107#1 ------------------------------------------------------------
consensus_14107#2 ------------------------------------------------------------
consensus_14107#0 GAAATGCTATGCAGGAGTCACAGCCTGAAAGTGTGGCTGAAAAGTCTGCAGAGGATGGTT 780
consensus_14107#1 ------------------------------------------------------------
consensus_14107#2 ------------------------------------------------------------
consensus_14107#0 ATAACTGGCGCAAATATGGGCAAAAGCATGTTAAGGGAAGTGAGAACCCGAGAAGCTATT 840
consensus_14107#1 ------------------------------------------------------------
consensus_14107#2 ------------------------------------------------------------
consensus_14107#0 ACAAGTGCACACATCCTAACTGTGATGTAAAAAAGCTATTGGAGCGTTCGCTTGATGGTC 900
consensus_14107#1 ------------------------------------------------------------
consensus_14107#2 ------------------------------------------------------------
consensus_14107#0 AGATTACTGAAGTGGTTTATAAAGGGCGTCACAATCACCCTAAGCCCCAACCCAATAGGA 960
consensus_14107#1 ------------------------------------------------------------
consensus_14107#2 ------------------------------------------------------------
consensus_14107#0 GGCTGTCTGCCGGTGCAGTTCCTCCAATCCAGGGTGAAGAAAGATATGATGGTGTGGCAA 1020
consensus_14107#1 ------------------------------------------------------------
consensus_14107#2 ------------------------------------------------------------
consensus_14107#0 CTACTGATGACAAATCTTCAAATGTTCTTAGCATTCTTGGTAATGCAGTACATACAGCTG 1080
consensus_14107#1 ------------------------------------------------------------
consensus_14107#2 ------------------------------------------------------------
consensus_14107#0 GTATGATTGAGCCTGTTCCAGGCTCAGCTAGTGATGATGACAATGATGCCGGAGGAGGGA 1140
consensus_14107#1 ------------------------------------------------------------
consensus_14107#2 ------------------------------------------------------------
consensus_14107#0 GACCTTACCCTGGAGATGATGCTGTTGAGGATGATGATTTAGAGTCAAAACGAAGGAAAA 1200
consensus_14107#1 ------------------------------------------------------------
consensus_14107#2 ------------------------------------------------------------
consensus_14107#0 TGGAATCTGCTGCTATTGATGCTGCTTTGATGGGCAAGCCTAACCGTGAGCCTCGTGTTG 1260
consensus_14107#1 ------------------------------------------------------------
consensus_14107#2 ------------------------------------------------------------
consensus_14107#0 TAGTACAAACGGTTAGTGAGGTTGACATCTTGGATGATGGGTACCGCTGGCGCAAGTATG 1320
consensus_14107#1 ------------------------------------------------------------
consensus_14107#2 ------------------------------------------------------------
consensus_14107#0 GCCAGAAAGTAGTTAAAGGAAACCCCAATCCACGGAGTTACTACAAGTGCACAAATACAG 1380
consensus_14107#1 ------------------------------------------------------------
consensus_14107#2 ------------------------------------------------------------
consensus_14107#0 GATGCCCAGTCAGGAAGCATGTTGAGAGAGCATCACATGATCCAAAATCAGTCATAACAA 1440
consensus_14107#1 -ATGCCCAGTCAGGAAGCATGTTGAGAGAGCATCACATGATCCAAAATCAGTCATAACAA 59
consensus_14107#2 ------------------------------------------------------------
consensus_14107#0 CATATGAAGGAAAACATAACCATGAAGTCCCTGCGTCGAGGAATGCGAGCCATGAGATGT 1500
consensus_14107#1 CATATGAAGGAAAACATAACCATGAAGTCCCTGCGTCGAGGAATGCGAGCCATGAGATGT 119
consensus_14107#2 ------------------------------------------------------------
consensus_14107#0 CCACTCCCCCCATGAAGCCTGTTGTCCATCCAATTAACAGCAATATGCAGGGCCTTGGTG 1560
consensus_14107#1 CCACTCCCCCCATGAAGCCTGTTGTCCATCCAATTAACAGCAATATGCAGGGCCTTGGTG 179
consensus_14107#2 ------------------------------------------------------------
consensus_14107#0 GCATGATGAGAGCATGTGAACCTAGGACATTTCCAAACCAATATTCTCAAGCAGCTGAAA 1620
consensus_14107#1 GCATGATGAGAGCATGTGAACCTAGGACATTTCCAAACCAATATTCTCAAGCAGCTGAAA 239
consensus_14107#2 ------------------------------------------------------------
consensus_14107#0 GTGACACCATCAGCCTTGATCTTGGTGTTGGAATCAGCCCGAACCACAGCGATGCCACAA 1680
consensus_14107#1 GTGACACCATCAGCCTTGATCTTGGTGTTGGAATCAGCCCGAACCACAGCGATGCCACAA 299
consensus_14107#2 ------------------------------------------------------------
consensus_14107#0 ACCAATTGCAGTCCTCAGTTTCTGATCAGATGCAGTATCAAATGCAGCCCATGGGTTCAG 1740
consensus_14107#1 ACCAATTGCAGTCCTCAGTTTCTGATCAGATGCAGTATCAAATGCAGCCCATGGGTTCAG 359
consensus_14107#2 ------------------------------------------------------------
consensus_14107#0 TATACAGTAATATGGGACTTCCAGCAATGGCAATGCCGACTATGGCTGGCAATGCAGCTA 1800
consensus_14107#1 TATACAGTAATATGGGACTTCCAGCAATGGCAATGCCGACTATGGCTGGCAATGCAGCTA 419
consensus_14107#2 ------------------------------------------------------------
consensus_14107#0 GCAATATATATGGTTCGAGAGAAGAAAAACCTAGTGAAGGTTTTACTTTCAAAGCCACAC 1860
consensus_14107#1 GCAATATATATGGTTCGAGAGAAGAAAAACCTAGTGAAGGTTTTACTTTCAAAGCCACAC 479
consensus_14107#2 ------------------------------------------------------------
consensus_14107#0 CGATGGACCATTCGGCTAACTTATGCTACAGTACCGCCGGCAATTTAGTCATGGGTCCGT 1920
consensus_14107#1 CGATGGACCATTCGGCTAACTTATGCTACAGTACCGCCGGCAATTTAGTCATGGGTCCGT 539
consensus_14107#2 ---------------------CCGGCTACAGTACCGCCGGCAATTTAGTCATGGGTCCGT 39
************************************
consensus_14107#0 GAGAGTCTATACTAATGCTTATAGCTCGAGAATCATATATTACCAATGCTTCGTATTGAC 1980
consensus_14107#1 GAGAGTCTATACTAATGCTTATAGCTCGAGAATCATATATTACCAATGCTTCGTATTGAC 599
consensus_14107#2 GAGAGTCTATACTAATGCTTATAGCTCGAGAATCATATATTACCAGTGCTTCGTATTGAC 99
********************************************* **************
consensus_14107#0 ATTCTCTTCAGAAAGATGCTCCTATCATTGACACATCAGTTGAACCGGAGGCGAGAGCTG 2040
consensus_14107#1 ATTCTCTTCAGAAAGATGCTCCTATCATTGACACATCAGTTGAACCGGAGGCGAGAGCTG 659
consensus_14107#2 ATTCTCTTCAGAAAGATGCTCCTATCATTGACACATCAGTTGAACCGGAGGCGAGAGCTG 159
************************************************************
consensus_14107#0 TACCTGTGGGCTGCAGCAAAATACACCACATGGGTCTTCTGGAGCGGCAAAGGCCTTGTT 2100
consensus_14107#1 TACCTGTGGGCTGCAGCAAAATACACCACATGGGTCTTCTGGAGCGGCAAAGGCCTTGTT 719
consensus_14107#2 TACCTGTGGGCTGCAGCAAAATACACCACATGGGTCTTCTGGAGCGGCAA-GGCCTTGTT 218
************************************************** *********
consensus_14107#0 GTATACTTGTATGTGGCACTGGCCCTATATTCGTTGTACAGTGAACCCGTTAAGATTAAT 2160
consensus_14107#1 GTATACTTGTATGTGGCACTGGCCCTATATTCGTTGTACAGTGAACCCGTAAGGATTAAT 779
consensus_14107#2 GTATACTTGTATGTGGCACTGGCCCTATATTCGTTGTACAGTGAACCCGTTAAGATTAAT 278
************************************************** * *******
consensus_14107#0 TAGATCATCAGAATTTGGTTTTCTTTAACTATCTTCGCCTTCAGTGGAATGTGGATAGAA 2220
consensus_14107#1 TAGATCATCAGAATTTGGTTTTCTTCTTAAAGGAA------------------------- 814
consensus_14107#2 TAGATCATCAGAATTTGGTTTTCTTTAACTATCTTCGCCTTCAGTGGAATGTGGATAGAA 338
************************* *
consensus_14107#0 CATGGATTATGGTTGATTTGGTTTTGTGAGCTTGTCTAATTCTCTTTTGTGACAAAGCTT 2280
consensus_14107#1 ------------------------------------------------------------
consensus_14107#2 CATGGATTATGGTTGATTTGGTTTTGTGAGCTAAAAAAAAAA------------------ 380
consensus_14107#0 TGTATCTCACTGCATATGTACAATGCCGTTGGCAGTAAAGATATGCAAATGTGATAC 2337
consensus_14107#1 ---------------------------------------------------------
consensus_14107#2 ---------------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||