These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14109#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1955 fasta sequence [GCAGCAGACGCAGAGACCAGTAGCTTTCGCAGAGGCGGCAGCCACCACCGCCTCCTCCTCCTCCTCCTCATCCGACGGTGTGCAACCAAGCGATGGAGTTCTCCGGCGGCGCGACCGTGTCGGCGCCGTTCGGTTGCTGCCGTGCGGCGTGGGGCGCCGCGGCGGCGGGTGCGGGGGCGGAGGGAAGGAGCAGGAGGGTTGTGCCGCGCGCGGTGGAGCCGCGGCGGCGCGGGCGGTGGATGGTGAGGTGCGTGGCGACGGAGAAGCACAAGGACGCGGCGGCGCGGCGCGGCGGCGTGGAGGTGGAGTTCGCCGACGAGGAGGACTACGTCAAGGGCGGCGGCGGCGAGCTTCTCTACGTGCAAATGCAGGCGTCCAAGTCCATGGACAGCCAGTCCAAGATCTCCTCCAAGCTGCTGCCCATACCCGATGAAAATTCAGTTCTTGATTTGGTCATCATTGGCTGCGGTCCAGCTGGCTTATCCCTAGCAGCAGAGTCAGCTAAGAAAGGGCTCAATG-TT-GGTCTCATTGGCCCTGATCTTCCATTCACGAACAACTACGGTGTGTGGGAGGATGAATTCAAAGACCTGGGCCTGGAGAGCTGCATTGAACATGTCTGGAAGGATACTATCGTGTACCTAGACGGTAACAAGCCAATAATGATTGGCCGTGCGTATGGCAGGGTTCACAGGGACTTGCTGCACGAGGAGTTGCTGAGACGATGCTATGACGCTGGCGTCACATACCTCAGCTCGAAGGTGGACAAGATCATGGAATCTCCTGATGGACATCGGGTAGTCTGTTGTGAAGGGGATCGTGAGGTACTTTGCAGGCTTGCCATTGTTGCATCTGGGGCAGCATCTGGTAGGCTTCTAGAGTACGAGGTTGGTGGTCCGCGTGTTTGTGTGCAGACTGCATATGGTGTCGAAGTCGAGGTGGAAAACAATCCATATGATCCCAGCTTAATGGTTTTCATGGACTACAGAGATTGCTTCAAAGACAAATTCTCACATCCTGAGCAAGGAAATCCAACGTTCCTCTATGCCATGCCCATGTCATCCACACGAATTTTCTTTGAGGAAACATGCCTAGCTTCTAAAGAAGCAATGCCCTTTGACCTCCTTAAAAAGCGGTTGATGTCTCGGTTGGATGCAATGGGAGTTCATATTCGAAAAGTATACGAGGAGGAATGGTCCTACATTCCTGTTGGAGGGTCCTTACCAAATACAGACCAGAAAAATCTCGCATTTGGTGCGGCAGCAAGTATGGTGCATCCTGCAACCGGATACTCGGTGGTTAGATCATTGTCTGAAGCTCCAAGATATGCATCTGTGATATCTGATATCTTGAGAAACCGTGTCTACCCTGGAGAATATTTGCCTGGAACCTCTCAAAGTTCCAGTCCATCAATGCTTGCATGGAGAACATTATGGCCCCAAGAACGGAAACGTCAACGATCATTCTTCCTTTTTGGGCTGGCTTTGATAATCCAACTGAATAACGAAGGCATTCAGACATTCTTTGAAACCTTTTTCCGGTTGCCCAAATGGATGTGGCGAGGATTCCTTGGTTCGACGCTTTCTTCAGTGGATCTCATACTCTTTGCATTCTACATGTTCACAATTGCGCCGAACCAAATGCGAATGAACCTTGTCAGACATCTCCTCTCTGATCCGACCGGCTCAACGATGATCAAGACCTACCTGACCTTGTAAAACCATTTCAGCAGTCTACAAGAATATTAGGAAATGTACAGTTTTGTAGTTTGTACATAACATAGTGAGAGCCAGAGGATATGGGGGTTGGGGGGTTACTTATCATGCTAGAACAACAAAACACTGCAAGAATTTTATGCATGAATTTGGCAAATGGAATAGATTATGCAGAATGGGAACACGTGAATACGTGATGCGTGTGCTGGAACA-ACAAGTAGGAGGAATAAAAC-CCATGGATTA] [+] EMBL CB672157 [GCAGCAGACGCAGAGACCAGTAGCTTTCGCAGAGGCGGCAGCCACCACCGCCTCCTCCTCCTCCTCCTCATCCGACGGTGTGCAACCAAGCGATGGAGTTCTCCGGCGGCGCGACCGTGTCGGCGCCGTTCGGTTGCTGCCGTGCGGCGTGGGGCGCCGCGGCGGCGGGTGCGGGGGCGGAGGGAAGGAGCAGGAGGGTTGTGCCGCGCGCGGTGGAGCCGCGGCGGCGCGGGCGGTGGATGGTGAGGTGCGTGGCGACGGAGAAGCACAAGGACGCGGCGGCGCGGCGCGGCGGCGTGGAGGTGGAGTTCGCCGACGAGGAGGACTACGTCAAGGGCGGCGGCGGCGAGCTTCTCTACGTGCAAATGCAGGCGTCCAAGTCCATGGACAGCCAGTCCAAGATCTCCTCCAAGCTGCTGCCCATACCCGATGAAAATTCAGTTCTTGATTTGGTCATCATTGGCTGCGGTCCAGCTGGCTTATCCCTAGCAGCAGAGTCAGCTAAGAAAGGGCTCAATG TTGGGTCTCATTGGCCCTGATCTTCCATTCACGAACACCTACGGTGTGTGGGA ] [+] EMBL CB659138 [ ACGCCTAGACCAGTAGCTTTCGCAGAGGCGGCAGCCACCACCGCCTCCTCCTCCTCCTCCTCATCCGACGGTGTGCAACCAAGCGATGGAGTTCTCCGGCGGCGCGACCGTGTCGGCGCCGTTCGGTTGCTGCCGTGCGGCGTGGGGCGCCGCGGCGGCGGGTGCGGGGGCGGAGGGAAGGAGCAGGAGGGTTGTGCCGCGCGCGGTGGAGCCGCGGCGGCGCGGGCGGTGGATGGTGAGGTGCGTGGCGACGGAGAAGCACAAGGACGCGGCGGCGCGGCGCGGCGGCGTGGAGGTGGAGTTCGCCGACGAGGAGGACTACGTCAAGGGCGGCGGCGGCGAGCTTCTCTACGTGCAAATGCAGGCGTCCAAGTCCATGGACAGCCAGTCCAAGATCTCCTCCAAGCTGCTGCCCATACCCGATGAAAATTCAGTTCTTGATTTGGTCATCATTGGCTGCGGTCCAGCTGGCTTATCCCTAGCAGCAGAGTCAGCTAAGAAAGGGCTCAATG TT GGTCTCATTGGCCCTGATCTTCCATTCACGAACAACTACGGTGTGTGGGAGGATGAATTCAAAGACCTGGGCCTGGAGAGCTGCATTGAACATGTCTGGAAGGATACTATCGTGTACCTAGACGGTAACAAGCCAATAATGATTGGCCGTGCGTATGGCAGGGTTCACAGGGACTTGCTGCACGAGGAGTTGCTGAGACGATGCTATGACGCTGGCGTCACATACCTCAGCTCGAAGGTGGACAAGATCATGG ] [+] EMBL AK072015 [ AGACCAGTAGCTTTCGCAGAGGCGGCAGCCACCACCGCCTCCTCCTCCTCCTCCTCATCCGACGGTGTGCAACCAAGCGATGGAGTTCTCCGGCGGCGCGACCGTGTCGGCGCCGTTCGGTTGCTGCCGTGCGGCGTGGGGCGCCGCGGCGGCGGGTGCGGGGGCGGAGGGAAGGAGCAGGAGGGTTGTGCCGCGCGCGGTGGAGCCGCGGCGGCGCGGGCGGTGGATGGTGAGGTGCGTGGCGACGGAGAAGCACAAGGACGCGGCGGCGCGGCGCGGCGGCGTGGAGGTGGAGTTCGCCGACGAGGAGGACTACGTCAAGGGCGGCGGCGGCGAGCTTCTCTACGTGCAAATGCAGGCGTCCAAGTCCATGGACAGCCAGTCCAAGATCTCCTCCAAGCTGCTGCCCATACCCGATGAAAATTCAGTTCTTGATTTGGTCATCATTGGCTGCGGTCCAGCTGGCTTATCCCTAGCAGCAGAGTCAGCTAAGAAAGGGCTCAATG TT GGTCTCATTGGCCCTGATCTTCCATTCACGAACAACTACGGTGTGTGGGAGGATGAATTCAAAGACCTGGGCCTGGAGAGCTGCATTGAACATGTCTGGAAGGATACTATCGTGTACCTAGACGGTAACAAGCCAATAATGATTGGCCGTGCGTATGGCAGGGTTCACAGGGACTTGCTGCACGAGGAGTTGCTGAGACGATGCTATGACGCTGGCGTCACATACCTCAGCTCGAAGGTGGACAAGATCATGGAATCTCCTGATGGACATCGGGTAGTCTGTTGTGAAGGGGATCGTGAGGTACTTTGCAGGCTTGCCATTGTTGCATCTGGGGCAGCATCTGGTAGGCTTCTAGAGTACGAGGTTGGTGGTCCGCGTGTTTGTGTGCAGACTGCATATGGTGTCGAAGTCGAGGTGGAAAACAATCCATATGATCCCAGCTTAATGGTTTTCATGGACTACAGAGATTGCTTCAAAGACAAATTCTCACATCCTGAGCAAGGAAATCCAACGTTCCTCTATGCCATGCCCATGTCATCCACACGAATTTTCTTTGAGGAAACATGCCTAGCTTCTAAAGAAGCAATGCCCTTTGACCTCCTTAAAAAGCGGTTGATGTCTCGGTTGGATGCAATGGGAGTTCATATTCGAAAAGTATACGAGGAGGAATGGTCCTACATTCCTGTTGGAGGGTCCTTACCAAATACAGACCAGAAAAATCTCGCATTTGGTGCGGCAGCAAGTATGGTGCATCCTGCAACCGGATACTCGGTGGTTAGATCATTGTCTGAAGCTCCAAGATATGCATCTGTGATATCTGATATCTTGAGAAACCGTGTCTACCCTGGAGAATATTTGCCTGGAACCTCTCAAAGTTCCAGTCCATCAATGCTTGCATGGAGAACATTATGGCCCCAAGAACGGAAACGTCAACGATCATTCTTCCTTTTTGGGCTGGCTTTGATAATCCAACTGAATAACGAAGGCATTCAGACATTCTTTGAAACCTTTTTCCGGTTGCCCAAATGGATGTGGCGAGGATTCCTTGGTTCGACGCTTTCTTCAGTGGATCTCATACTCTTTGCATTCTACATGTTCACAATTGCGCCGAACCAAATGCGAATGAACCTTGTCAGACATCTCCTCTCTGATCCGACCGGCTCAACGATGATCAAGACCTACCTGACCTTGTAAAACCATTTCAGCAGTCTACAAGAATATTAGGAAATGTACAGTTTTGTAGTTTGTACATAACATAGTGAGAGCCAGAGGATATGGGGGTT GGGGGTTACTTATCATGCTAGAACAACAAAACACTGCAAGAATTTTATGCA ] [+] EMBL AK066182 [ TCGCAGAGGCGGCAGCCACCACCGCCTCCTCCTCCTCCTCCTCATCCGACGGTGTGCAACCAAGCGATGGAGTTCTCCGGCGGCGCGACCGTGTCGGCGCCGTTCGGTTGCTGCCGTGCGGCGTGGGGCGCCGCGGCGGCGGGTGCGGGGGCGGAGGGAAGGAGCAGGAGGGTTGTGCCGCGCGCGGTGGAGCCGCGGCGGCGCGGGCGGTGGATGGTGAGGTGCGTGGCGACGGAGAAGCACAAGGACGCGGCGGCGCGGCGCGGCGGCGTGGAGGTGGAGTTCGCCGACGAGGAGGACTACGTCAAGGGCGGCGGCGGCGAGCTTCTCTACGTGCAAATGCAGGCGTCCAAGTCCATGGACAGCCAGTCCAAGATCTCCTCCAAGCTGCTGCCCATACCCGATGAAAATTCAGTTCTTGATTTGGTCATCATTGGCTGCGGTCCAGCTGGCTTATCCCTAGCAGCAGAGTCAGCTAAGAAAGGGCTCAATG TT GGTCTCATTGGCCCTGATCTTCCATTCACGAACAACTACGGTGTGTGGGAGGATGAATTCAAAGACCTGGGCCTGGAGAGCTGCATTGAACATGTCTGGAAGGATACTATCGTGTACCTAGACGGTAACAAGCCAATAATGATTGGCCGTGCGTATGGCAGGGTTCACAGGGACTTGCTGCACGAGGAGTTGCTGAGACGATGCTATGACGCTGGCGTCACATACCTCAGCTCGAAGGTGGACAAGATCATGGAATCTCCTGATGGACATCGGGTAGTCTGTTGTGAAGGGGATCGTGAGGTACTTTGCAGGCTTGCCATTGTTGCATCTGGGGCAGCATCTGGTAGGCTTCTAGAGTACGAGGTTGGTGGTCCGCGTGTTTGTGTGCAGACTGCATATGGTGTCGAAGTCGAGGTGGAAAACAATCCATATGATCCCAGCTTAATGGTTTTCATGGACTACAGAGATTGCTTCAAAGACAAATTCTCACATCCTGAGCAAGGAAATCCAACGTTCCTCTATGCCATGCCCATGTCATCCACACGAATTTTCTTTGAGGAAACATGCCTAGCTTCTAAAGAAGCAATGCCCTTTGACCTCCTTAAAAAGCGGTTGATGTCTCGGTTGGATGCAATGGGAGTTCATATTCGAAAAGTATACGAGGAGGAATGGTCCTACATTCCTGTTGGAGGGTCCTTACCAAATACAGACCAGAAAAATCTCGCATTTGGTGCGGCAGCAAGTATGGTGCATCCTGCAACCGGATACTCGGTGGTTAGATCATTGTCTGAAGCTCCAAGATATGCATCTGTGATATCTGATATCTTGAGAAACCGTGTCTACCCTGGAGAATATTTGCCTGGAACCTCTCAAAGTTCCAGTCCATCAATGCTTGCATGGAGAACATTATGGCCCCAAGAACGGAAACGTCAACGATCATTCTTCCTTTTTGGGCTGGCTTTGATAATCCAACTGAATAACGAAGGCATTCAGACATTCTTTGAAACCTTTTTCCGGTTGCCCAAATGGATGTGGCGAGGATTCCTTGGTTCGACGCTTTCTTCAGTGGATCTCATACTCTTTGCATTCTACATGTTCACAATTGCGCCGAACCAAATGCGAATGAACCTTGTCAGACATCTCCTCTCTGATCCGACCGGCTCAACGATGATCAAGACCTACCTGACCTTGTAAAACCATTTCAGCAGTCTACAAGAATATTAGGAAATGTACAGTTTTGTAGTTTGTACATAACATAGTGAGAGCCAGAGGATATGGGGGTTGGGGGGTTACTTATCATGCTAGAACAACAAAACACTGCAAGAATTTTATGCATGAATTTGGCAAATGGAATAGATTATGCGGAATGGGAACACGTGAATACGTGATGCGTGTGCTGGAACA ACAAGTAGGAGGAATAAAAC CCATGGATTA] [+] EMBL CB636454 [ TCCTCCTCCTCCTCATCCGACGGTGTGCAACCAAGCGATGGAGTTCTCCGGCGGCGCGACCGTGTCGGCGCCGTTCGGTTGCTGCCGTGCGGCGTGGGGCGCCGCGGCGGCGGGTGCGGGGGCGGAGGGAAGGAGCAGGAGGGTTGTGCCGCGCGCGGTGGAGCCGCGGCGGCGCGGGCGGTGGATGGTGAGGTGCGTGGCGACGGAGAAGCACAAGGACGCGGCGGCGCGGCGCGGCGGCGTGGAGGTGGAGTTCGCCGACGAGGAGGACTACGTCAAGGGCGGCGGCGGCGAGCTTCTCTACGTGCAAATGCAGGCGTCCAAGTCCATGGACAGCCAGTCCAAGATCTCCTCCAAGCTGCTGCCCATACCCGATGAAAATTCAGTTCTTGATTTGGTCATCATTGGCTGCGGTCCAGCTGGCTTATTCCTAGCAGCAGAGTCAGCTAAGAAAGGGCTCAATG TT GGTCTCATTG ] [+] EMBL CB636426 [ TCCTCCTCCTCCTCATCCGACGGTGTGCAACCAAGCGATGGAGTTCTCCGGCGGCGCGACCGTGTCGGCGCCGTTCGGTTGCTGCCGTGCGGCGTGGGGCGCCGCGGCGGCGGGTGCGGGGGCGGAGGGAAGGAGCAGGAGGGTTGTGCCGCGCGCGGTGGAGCCGCGGCGGCGCGGGCGGTGGATGGTGAGGTGCGTGGCGACGGAGAAGCACAAGGACGCGGCGGCGCGGCGCGGCGGCGTGGAGGTGGAGTTCGCCGACGAGGAGGACTACGTCAAGGGCGGCGGCGGCGAGCTTCTCTACGTGCAAATGCAGGCGTCCAAGTCCATGGACAGCCAGTCCAAGATCTCCTCCAAGCTGCTGCCCATACCCGATGAAAATTCAATTCTTGATTTGGTCATCATTGGCTGCGGTCCAGCTGGCTTATCCCTAGCAGCAGAGTCAGCTAAGAAAGGGCTCAATG TT GGTCTCATTGGCCCTGATCTTCCATTCACGAACAACTACGGTGTGT ] [+] EMBL CB653161 [ GCTTCTCCCTAGCAGCAGAGTCAGCTAAGAAAGGGCTCAATGATT GGTCTCATTGGCCCTGATCTTCCATTCACGAACAACTACGGTGTGTGGGAGGATGAATTCAAAGACCTGGGCCTGGAGAGCTGCATTGAACATGTCTGGAAGGATACTATCGTGTACCTAGACGGTAACAAGCCAATAATGATTGGCCGTGCGTATGGCAGGGTTCACAGGGACTTGCTGCACGAGGAGTTGCTGAGACGATGCTATGACGCTGGCGTCACATACCTCAGCTCGAAGGTGGACAAGATCATGGAATCTCCTGATGGACATCGGGTAGTCTGTTGTGAAGGGGATCGTGAGGTACTTTGCAGGCTTGCCATTGTTGCATCTGGGGCAGCATCTGGTAAGCTTCTAGAGTACGAGGTTGGTGGTCCGCGTGTTTGTGTGCAGACTGCATATGGTGTCAAAGTCAAGGTGGAAAACAATCCATATGATCCCAGCTTAATGGTTTTCATGGACTACAGAGATTGCTTCAAAGACAAATTCTCACATCCTGAGCAAGGAAATCCAACGTTCCTCTATGCCATGCCCATGTCATCCACACGAATTTTCTTTGAAGAAACATGCCTAGCTTCTAAAGAAGCAATGCCCTTTGACCTCCTTAAAAAGCGGTTGATGTCTCGGTTGG ] [-] EMBL CB659139 [ TTGACCTCCTTAAAAAGCGGTTGATGTCTCGGTTGGATGCAATGGGAGTTCATATTCGAAAAGTATACGAGGAGGAATGGTCCTACATTCCTGTTGGAGGGTCCTTACCAAATACAGACCAGAAAAATCTCGCATTTGGTGCGGCAGCAAGTATGGTGCATCCTGCAACCGGATACTCGGTGGTTAGATCATTGTCTGAAGCTCCAAGATATGCATCTGTGATATCTGATATCTTGAGAAACCGTGTCTACCCTGGAGAATATTTGCCTGGAACCTCTCAAAGTTCCAGTCCATCAATGCTTGCATGGAGAACATTATGGCCCCAAGAACGGAAACGTCAACGATCATTCTTCCTTTTTGGGCTGGCTTTGATAATCCAACTGAATAACGAAGGCATTCAGACATTCTTTGAAACCTTTTTCCGGTTGCCCAAATGGATGTGGCGAGGATTCCTTGGTTCGACGCTTTCTTCAGTGGATCTCATACTCTTTGCATTCTACATGTTCACAATTGCGCCGAACCAAATGCGAATGAACCTTGTCAGACATCTCCTCTCTGATCCGACCGGCTCAACGATGATCAAGACCTACCTGACCTTGTAAAACCATTTCAGCAGTCTACAAGAATATTAGGAAATGTACAGTTTTGTAGTTTGTACATAACATAGTGAGAGCCAGAGGATATGGGGGTTGGGGGGTTACTTATCATGCTAGAACAACAAAACACTGCAAGAATTTTATGCATGAATTTGGCAAATGGAATAGATTATGCAGAATGGGAACACGTG ] [-] EMBL CB672158 [ CGAAAAGTATACGAGGAGGAATGGTCNTACATTCCTGTTGGAGGGTCCTTACCAAATACAGACCAGAAAAATCTCGCATTTGGTGCGGCAGCAAGTATGGTGCATCCTGCAACCGGATACTCGGTGGTTAGATCATTGTCTGAAGCTCCAAGATATGCATCTGTGATATCTGATATCTTGAGAAACCGTGTCTACCCTGGAGAATATTTGCCTGGAACCTCTCAAAGTTCCAGTCCATCAATGCTTGCATGGAGAACATTATGGCCCCAAGAACGGAAACGTCAACGATCATTCTTCCTTTTTGGGCTGGCTTTGATAATCCAACTGAATAACGAAGGCATTCAGACATTCTTTGAAACCTTTTTCCGGTTGCCCAAATGGATGTGGCGAGGATTCCTTGGTTCGACGCTTTCTTCAGTGGATCTCATACTCTTTGCATTCTACATGTTCACAATTGCGCGGAACCAAATGCGAATGAACCTTGTCAGACATCTCCTCTCTGATCCGACCGGTTCAACGATGATCAAGCCTTCCCTGCCCTTGTAAAACCATTTCAGCAGTGTACAAGAATATTAGGAAATGTACAGTTTTGTAGTTTGTACATACCATAGTGAGACCCAGAGGATATGGGGGTTGGGGGGTTACTTATCATGCTAGAGCAACAAAACACTGCAAGAATTTTATGCATGAATTTGGCAAATGGAATAGATTATGCAGAATGGGAACACGTGAATACGTGATGCGTGTGTTGGAACATCCAAGTAGGGGGAATAAAACTCCATG ] [-] EMBL CB653162 [ AGCAAGTATGGTGCATCCTGCAACCGGATAGTCGGTGGTTAGATCATTGTCTGAAGCTCCAAGATATGCATCTGTGATATCTGATATCTTGAGAAACGGTGTCTACCCTGGAGAATATTTGCGTGGAACCTCTCAAAGTTCCAGTCCATCAATGCTTGCATGGAGAACATTATGGCCCCAAGAACGGAAAGGTCTACGATCATTTTTCCTTTTTGGGCTGGGTTTGATAATCCACATGAATAACGAAGGCATTCAGACATTCTTTGAAACCTTTTTCCGGTTGCCCAAATGGATGTGGCGAGGATTCCTTGGTTCGACGATTTGTTCAGTGGATCTCATACTTTTTGCATTCTTCATGTTCACAATTGCGCCGAACCAAATGTGAATGACCCTTGTCAGACATGTCCTATCTGATCCGACCGGTTCAAGGATGATCAAGACATACTTGCCCTTGTAAAACCATTTCAGCAGTCTACAAGAATATTAGGAAATGTACAGTTTTGTAGTTTGTACATAACATAGTGAGAGCCAGAGGATATGGGGGTTGGGGGGTTACTTATCATG TTTAACAACAAAACATTGCAAGGATTTTATGCATGAATTT ] [-] EMBL CB636427 [ GATATGCATCTGTGATATCTGATATCTTGAGAAACCGTGTCTACCCTGGAGAATATTTGCCTGGAACCTCTCAAAGTTCCAGTCCATCAATGCTTGCATGGAGAACATTATGGCCCCAAGAACGGAAACGTCAACGATCATTCTTCCTTTTTGGGCTGGCTTTGATAATCCAACTGAATAACGAAGGCATTCAGACATTCTTTGAAACCTTTTTCCGGTTGCCCAAATGGATGTGGCGAGGATTCCTTGGTTCGACGCTTTCTTCAGTGGATCTCATACTCTTTGCATTCTACATGTTCACAATTGCGCCGAACCAAATGCGAATGAACCTTGTCAGACATCTCCTCTTTGATCCGACCGGCTCAACGATGATCAAGACCTACCTGACCTTGTAAAACCATTTCAGCAGTTTACAAGAATATTAGGAAATGTACAGTTTTGTAGTTTGTACATAACATAGTGAGAGCCAGAGGATATGGGGGTTGGGGGGTTACTTATCATGCTAGAACAACAAAACACTGCAAGAATTTTATGCATGAATTTGGCAAATGGAATAGATTATGCAGAATGG ] [-] EMBL CB636455 [ CCAAATGGATGTGGCGAGGATTCCTTGGTTCGACGCTTTCTTCAGTGGATTTCATACTCTTTGCATTTTACATGTTCACAATTGCGCCGAACCAAATGCGAATGAACCTTGTCAGACATTTCCTCTCTGATCCGACCGGCTCAACGATGATCAAGACCTACCTGACCTTGTAAAACCATTTCAGCAGTTTACAAGAATATTAGGAAATGTACAGTTTTGTAGTTTGTACATAACATAGTGAGAGCCAGAGGATATGGGGGTTGGGGGGTTACTTATCATGCTAGAACAACAAAACACTGCA ] [+] EMBL CB682375 [ ATGACCTTGACCTACCTGACCTTGTAAAACCATTTCAGCAGTCTACAAGAATATTAGGAAATGTACAGTTTTGTAGTTTGTACATAACATAGTGAGAGCCAGAGGATATGGGGGTTGGGGGGTTACTTATCATGCTAGAACAACAAAACACTGCAAGAATTTTATGCATGAATTTGGCAAATGGAATA ] consensusID : consensus_14109#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 685 fasta sequence [CCTACATTCCTGTGNGAGGGTCCTTACCAAATACAGACCAGAAAAATCTCGCATTTGGTGCGGCAGCAAGTATGGTGCATCCTGCAACCGGATACTCAGTGGTTAGATCATTGTCTGAAGCTCCAAGATATGCATCTGTGATATCTGACATCTTGAGAAACCGTGTCTACCCTGGACAATATTTGCCTGGAACCTCTCAAAGTTCCAGTCCATCAATGCTTGCATGGAGAACATTATGGCCCCAAGAACGGAAACGTCAACGATCATTCTTCCTTTTTGGGCTGGCTTTGATAATCCAACTGAATAACGAAGGCATTCAGACATTCTTTGAAACCTTTTTCCGGTTGCCCAAATGGATGTGGCGAGGATTCCTTGGTTCGACGCTTTCTTCAGTGGATCTCATACTCTTTGCATTCTACATGTTCACAATTGCGCCGAACCAAATGCGAATGAACCTTGTCAGACATCTCCTCTTTGATCCGACCGGCTCAACGATGATCAAGACCTACCTGACCTTGTAAAACCATTTCAGCAGTTTGAAAGAATACTAGGAAATGTACAGTTTTGTAGTTTGTACATAACATAGTGAGAGCCAGAGGATATGGGGGTTGGGGGGTTACTTATCATGCTAGAACAACAAAACACTGCAAGAATTTTATGCATGAATTTGGCAAAAAAAAAAAAA] [-] EMBL CA763005 [CCTACATTCCTGTGNGAGGGTCCTTACCAAATACAGACCAGAAAAATCTCGCATTTGGTGCGGCAGCAAGTATGGTGCATCCTGCAACCGGATACTCAGTGGTTAGATCATTGTCTGAAGCTCCAAGATATGCATCTGTGATATCTGACATCTTGAGAAACCGTGTCTACCCTGGACAATATTTGCCTGGAACCTCTCAAAGTTCCAGTCCATCAATGCTTGCATGGAGAACATTATGGCCCCAAGAACGGAAACGTCAACGATCATTCTTCCTTTTTGGGCTGGCTTTGATAATCCAACTGAATAACGAAGGCATTCAGACATTCTTTGAAACCTTTTTCCGGTTGCCCAAATGGATGTGGCGAGGATTCCTTGGTTCGACGCTTTCTTCAGTGGATCTCATACTCTTTGCATTCTACATGTTCACAATTGCGCCGAACCAAATGCGAATGAACCTTGTCAGACATCTCCTCTTTGATCCGACCGGCTCAACGATGATCAAGACCTACCTGACCTTGTAAAACCATTTCAGCAGTTTGAAAGAATACTAGGAAATGTACAGTTTTGTAGTTTGTACATAACATAGTGAGAGCCAGAGGATATGGGGGTTGGGGGGTTACTTATCATGCTAGAACAACAAAACACTGCAAGAATTTTATGCATGAATTTGGCAAAAAAAAAAAAA] consensusID : consensus_14109#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 680 fasta sequence [CATTTGGTCGGCCACCAAGTTTGTTGCATCTCGCAACCCGGATACTCAGTGGGTTAGATCATTGTCTGAAGCTCCCAAGATATGAATTTGTGATATTTGCCATCTTGAGAAACCCTGTTTACCCTGGACAATATTTGCCTGGAACCTCTCAAAGTTCCAGTCCATCAATGCTTGCATGGAGAACATTATGGCCCCAAGAACGGAAACGTCAACGATCATTCTTCCTTTTTGGGCTGGCTTTGATAATCCAACTGAATAACGAAGGCATTCAGACATTCTTTGAAACCTTTTTCCGGTTGCCCAAATGGATGTGGCGAGGATTCCTTGGTTCGACGCTTTTTTCAGTGGATTTCATACTCTTTGCATTCCACATGTTCACAATTGCGCCGAACCAAATGCGAATGAACCTTGTCAGACATTTCCTTTTTGATCCGACCGGCTCAACGATGATCAAGACCTACCTGACCTTGTAAAACCATTTCAGCAGTTTGAGAGAATACTTGGAAATGTCCAGTTTTGTAGTTTGTACATAACATAGTGAGAGCCAGGGGATATGGGGGTTGGGGGGTTACTTATCATGCTAGAACAACAAAACCCTGCAAGAATTTTATGCATGAATTTGGCAAATGGAATAGATTGTGCAGAATGGGACCAAAAAAAAAAAAAAAAAAAAAAAAAAA] [-] EMBL CA763004 [CATTTGGTCGGCCACCAAGTTTGTTGCATCTCGCAACCCGGATACTCAGTGGGTTAGATCATTGTCTGAAGCTCCCAAGATATGAATTTGTGATATTTGCCATCTTGAGAAACCCTGTTTACCCTGGACAATATTTGCCTGGAACCTCTCAAAGTTCCAGTCCATCAATGCTTGCATGGAGAACATTATGGCCCCAAGAACGGAAACGTCAACGATCATTCTTCCTTTTTGGGCTGGCTTTGATAATCCAACTGAATAACGAAGGCATTCAGACATTCTTTGAAACCTTTTTCCGGTTGCCCAAATGGATGTGGCGAGGATTCCTTGGTTCGACGCTTTTTTCAGTGGATTTCATACTCTTTGCATTCCACATGTTCACAATTGCGCCGAACCAAATGCGAATGAACCTTGTCAGACATTTCCTTTTTGATCCGACCGGCTCAACGATGATCAAGACCTACCTGACCTTGTAAAACCATTTCAGCAGTTTGAGAGAATACTTGGAAATGTCCAGTTTTGTAGTTTGTACATAACATAGTGAGAGCCAGGGGATATGGGGGTTGGGGGGTTACTTATCATGCTAGAACAACAAAACCCTGCAAGAATTTTATGCATGAATTTGGCAAATGGAATAGATTGTGCAGAATGGGACCAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14109#0 GCAGCAGACGCAGAGACCAGTAGCTTTCGCAGAGGCGGCAGCCACCACCGCCTCCTCCTC 60 consensus_14109#1 ------------------------------------------------------------ consensus_14109#2 ------------------------------------------------------------ consensus_14109#0 CTCCTCCTCATCCGACGGTGTGCAACCAAGCGATGGAGTTCTCCGGCGGCGCGACCGTGT 120 consensus_14109#1 ------------------------------------------------------------ consensus_14109#2 ------------------------------------------------------------ consensus_14109#0 CGGCGCCGTTCGGTTGCTGCCGTGCGGCGTGGGGCGCCGCGGCGGCGGGTGCGGGGGCGG 180 consensus_14109#1 ------------------------------------------------------------ consensus_14109#2 ------------------------------------------------------------ consensus_14109#0 AGGGAAGGAGCAGGAGGGTTGTGCCGCGCGCGGTGGAGCCGCGGCGGCGCGGGCGGTGGA 240 consensus_14109#1 ------------------------------------------------------------ consensus_14109#2 ------------------------------------------------------------ consensus_14109#0 TGGTGAGGTGCGTGGCGACGGAGAAGCACAAGGACGCGGCGGCGCGGCGCGGCGGCGTGG 300 consensus_14109#1 ------------------------------------------------------------ consensus_14109#2 ------------------------------------------------------------ consensus_14109#0 AGGTGGAGTTCGCCGACGAGGAGGACTACGTCAAGGGCGGCGGCGGCGAGCTTCTCTACG 360 consensus_14109#1 ------------------------------------------------------------ consensus_14109#2 ------------------------------------------------------------ consensus_14109#0 TGCAAATGCAGGCGTCCAAGTCCATGGACAGCCAGTCCAAGATCTCCTCCAAGCTGCTGC 420 consensus_14109#1 ------------------------------------------------------------ consensus_14109#2 ------------------------------------------------------------ consensus_14109#0 CCATACCCGATGAAAATTCAGTTCTTGATTTGGTCATCATTGGCTGCGGTCCAGCTGGCT 480 consensus_14109#1 ------------------------------------------------------------ consensus_14109#2 ------------------------------------------------------------ consensus_14109#0 TATCCCTAGCAGCAGAGTCAGCTAAGAAAGGGCTCAATGTTGGTCTCATTGGCCCTGATC 540 consensus_14109#1 ------------------------------------------------------------ consensus_14109#2 ------------------------------------------------------------ consensus_14109#0 TTCCATTCACGAACAACTACGGTGTGTGGGAGGATGAATTCAAAGACCTGGGCCTGGAGA 600 consensus_14109#1 ------------------------------------------------------------ consensus_14109#2 ------------------------------------------------------------ consensus_14109#0 GCTGCATTGAACATGTCTGGAAGGATACTATCGTGTACCTAGACGGTAACAAGCCAATAA 660 consensus_14109#1 ------------------------------------------------------------ consensus_14109#2 ------------------------------------------------------------ consensus_14109#0 TGATTGGCCGTGCGTATGGCAGGGTTCACAGGGACTTGCTGCACGAGGAGTTGCTGAGAC 720 consensus_14109#1 ------------------------------------------------------------ consensus_14109#2 ------------------------------------------------------------ consensus_14109#0 GATGCTATGACGCTGGCGTCACATACCTCAGCTCGAAGGTGGACAAGATCATGGAATCTC 780 consensus_14109#1 ------------------------------------------------------------ consensus_14109#2 ------------------------------------------------------------ consensus_14109#0 CTGATGGACATCGGGTAGTCTGTTGTGAAGGGGATCGTGAGGTACTTTGCAGGCTTGCCA 840 consensus_14109#1 ------------------------------------------------------------ consensus_14109#2 ------------------------------------------------------------ consensus_14109#0 TTGTTGCATCTGGGGCAGCATCTGGTAGGCTTCTAGAGTACGAGGTTGGTGGTCCGCGTG 900 consensus_14109#1 ------------------------------------------------------------ consensus_14109#2 ------------------------------------------------------------ consensus_14109#0 TTTGTGTGCAGACTGCATATGGTGTCGAAGTCGAGGTGGAAAACAATCCATATGATCCCA 960 consensus_14109#1 ------------------------------------------------------------ consensus_14109#2 ------------------------------------------------------------ consensus_14109#0 GCTTAATGGTTTTCATGGACTACAGAGATTGCTTCAAAGACAAATTCTCACATCCTGAGC 1020 consensus_14109#1 ------------------------------------------------------------ consensus_14109#2 ------------------------------------------------------------ consensus_14109#0 AAGGAAATCCAACGTTCCTCTATGCCATGCCCATGTCATCCACACGAATTTTCTTTGAGG 1080 consensus_14109#1 ------------------------------------------------------------ consensus_14109#2 ------------------------------------------------------------ consensus_14109#0 AAACATGCCTAGCTTCTAAAGAAGCAATGCCCTTTGACCTCCTTAAAAAGCGGTTGATGT 1140 consensus_14109#1 ------------------------------------------------------------ consensus_14109#2 ------------------------------------------------------------ consensus_14109#0 CTCGGTTGGATGCAATGGGAGTTCATATTCGAAAAGTATACGAGGAGGAATGGTCCTACA 1200 consensus_14109#1 ------------------------------------------------------CCTACA 6 consensus_14109#2 ------------------------------------------------------------ consensus_14109#0 TTCCTGTTGGAGGGTCCTTACCAAATACAGACCAGAAAAATCTCGCATTTGGTGCGGCAG 1260 consensus_14109#1 TTCCTGTGNGAGGGTCCTTACCAAATACAGACCAGAAAAATCTCGCATTTGGTGCGGCAG 66 consensus_14109#2 ---------------------------------------------CATTTGGTCGGCCAC 15 ******** * ** consensus_14109#0 CAAGTATGGTGCATCCTGCAACC-GGATACTCGGTGG-TTAGATCATTGTCTGAAGCTCC 1318 consensus_14109#1 CAAGTATGGTGCATCCTGCAACC-GGATACTCAGTGG-TTAGATCATTGTCTGAAGCTCC 124 consensus_14109#2 CAAGTTTGTTGCATCTCGCAACCCGGATACTCAGTGGGTTAGATCATTGTCTGAAGCTCC 75 ***** ** ****** ****** ******** **** ********************** consensus_14109#0 -AAGATATGCATCTGTGATATCTGATATCTTGAGAAACCGTGTCTACCCTGGAGAATATT 1377 consensus_14109#1 -AAGATATGCATCTGTGATATCTGACATCTTGAGAAACCGTGTCTACCCTGGACAATATT 183 consensus_14109#2 CAAGATATGAATTTGTGATATTTGCCATCTTGAGAAACCCTGTTTACCCTGGACAATATT 135 ******** ** ******** ** ************* *** ********* ****** consensus_14109#0 TGCCTGGAACCTCTCAAAGTTCCAGTCCATCAATGCTTGCATGGAGAACATTATGGCCCC 1437 consensus_14109#1 TGCCTGGAACCTCTCAAAGTTCCAGTCCATCAATGCTTGCATGGAGAACATTATGGCCCC 243 consensus_14109#2 TGCCTGGAACCTCTCAAAGTTCCAGTCCATCAATGCTTGCATGGAGAACATTATGGCCCC 195 ************************************************************ consensus_14109#0 AAGAACGGAAACGTCAACGATCATTCTTCCTTTTTGGGCTGGCTTTGATAATCCAACTGA 1497 consensus_14109#1 AAGAACGGAAACGTCAACGATCATTCTTCCTTTTTGGGCTGGCTTTGATAATCCAACTGA 303 consensus_14109#2 AAGAACGGAAACGTCAACGATCATTCTTCCTTTTTGGGCTGGCTTTGATAATCCAACTGA 255 ************************************************************ consensus_14109#0 ATAACGAAGGCATTCAGACATTCTTTGAAACCTTTTTCCGGTTGCCCAAATGGATGTGGC 1557 consensus_14109#1 ATAACGAAGGCATTCAGACATTCTTTGAAACCTTTTTCCGGTTGCCCAAATGGATGTGGC 363 consensus_14109#2 ATAACGAAGGCATTCAGACATTCTTTGAAACCTTTTTCCGGTTGCCCAAATGGATGTGGC 315 ************************************************************ consensus_14109#0 GAGGATTCCTTGGTTCGACGCTTTCTTCAGTGGATCTCATACTCTTTGCATTCTACATGT 1617 consensus_14109#1 GAGGATTCCTTGGTTCGACGCTTTCTTCAGTGGATCTCATACTCTTTGCATTCTACATGT 423 consensus_14109#2 GAGGATTCCTTGGTTCGACGCTTTTTTCAGTGGATTTCATACTCTTTGCATTCCACATGT 375 ************************ ********** ***************** ****** consensus_14109#0 TCACAATTGCGCCGAACCAAATGCGAATGAACCTTGTCAGACATCTCCTCTCTGATCCGA 1677 consensus_14109#1 TCACAATTGCGCCGAACCAAATGCGAATGAACCTTGTCAGACATCTCCTCTTTGATCCGA 483 consensus_14109#2 TCACAATTGCGCCGAACCAAATGCGAATGAACCTTGTCAGACATTTCCTTTTTGATCCGA 435 ******************************************** **** * ******** consensus_14109#0 CCGGCTCAACGATGATCAAGACCTACCTGACCTTGTAAAACCATTTCAGCAGTCTACAAG 1737 consensus_14109#1 CCGGCTCAACGATGATCAAGACCTACCTGACCTTGTAAAACCATTTCAGCAGTTTGAAAG 543 consensus_14109#2 CCGGCTCAACGATGATCAAGACCTACCTGACCTTGTAAAACCATTTCAGCAGTTTGAGAG 495 ***************************************************** * ** consensus_14109#0 AATATTAGGAAATGTACAGTTTTGTAGTTTGTACATAACATAGTGAGAGCCAGAGGATAT 1797 consensus_14109#1 AATACTAGGAAATGTACAGTTTTGTAGTTTGTACATAACATAGTGAGAGCCAGAGGATAT 603 consensus_14109#2 AATACTTGGAAATGTCCAGTTTTGTAGTTTGTACATAACATAGTGAGAGCCAGGGGATAT 555 **** * ******** ************************************* ****** consensus_14109#0 GGGGGTTGGGGGGTTACTTATCATGCTAGAACAACAAAACACTGCAAGAATTTTATGCAT 1857 consensus_14109#1 GGGGGTTGGGGGGTTACTTATCATGCTAGAACAACAAAACACTGCAAGAATTTTATGCAT 663 consensus_14109#2 GGGGGTTGGGGGGTTACTTATCATGCTAGAACAACAAAACCCTGCAAGAATTTTATGCAT 615 **************************************** ******************* consensus_14109#0 GAATTTGGCAAATGGAATAGATTATGCAGAATGGGAACACGTGAATACGTGATGCGTGTG 1917 consensus_14109#1 GAATTTGGCAAAAAAAAAAAAA-------------------------------------- 685 consensus_14109#2 GAATTTGGCAAATGGAATAGATTGTGCAGAATGGGACCAAAAAAAAAAAAAAAAAAAAAA 675 ************ ** * * consensus_14109#0 CTGGAACAACAAGTAGGAGGAATAAAACCCATGGATTA 1955 consensus_14109#1 -------------------------------------- consensus_14109#2 AAAAA--------------------------------- 680 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||