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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14114#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1854 fasta sequence
[CCAAGCTTCAACTTCAAGAACCCACCCACTTCTCCTCCTCTTCTCCATCCGCTGCGGCAAGCGCGCAATTCAGTTGCTGCGAGCTCGCTCGCCGGCGACAATGGCGGCGGCGGTGGCGGTGGTGGTTGGTTGCGTTCTTCTTGGTGGTGTGTGGGGGTTCCCGGAGGAGGATTTGGTGGCGCGGCTGCCGGGGCAGCCCGTCGTCGGGTTCAGGCAGTTCGCCGGATACGTCGACGTCGACGAGAAGGCCGGGAGGAGCCTCTTCTACTACTTCGCCGAGGCGGCGGAGGGCGCCGCCGCCAAGCCGCTCACCCTCTGGCTCAACGGAGGTCCTGGATGTTCTTCGGTTGGAGGTGGCGCGTTCACAGAGCTCGGCCCATTTTATCCGAGAGGAGATGGCAGAGGCCTGAGATTGAACAAGAAGTCTTGGAACAAAGTATCCAATCTTCTGTTTGTTGAATCACCGGCTGGAGTTGGATGGTCCTACTCCAACACTTCATCAGATTACAATACTGGCGATGCACAGACC-GCTAATGACATGTACAAATTTCTGTT-GGGATGGTACAAGAA-GTTCCCTG-AATACAGGTCAAGAGGGCTACTTCTTAGTGGAGAGAGCTATGCAGGGCATTATATACCGCAACTCACCGATGTACTTCTCACACATAATGAGAAATCAAATGGGTTCAAATTCAACATCAAGGGAGTAGCTATCGGGAATCCGCTTCTCAAGCTTGACAGAGATGTCCCCGCAACATATGAGTATTTCTGGTCCCATGGCATGATCTCTGACGAAATATTTCTATCAATCAGCCACAGTTGTGATTTTGAGGACTATACCTTTAGCAACCCCCACAATGAGAGCAAGTCATGCAATGATGCCATTGCAGAGGCAAACAGTATAGTTGGGGATTATGTGAACAATTACGATGTTATTCTTGATGTGTGCTACCCATCAATTGTGATGCAGGAGCTACGGCTGCGGAAATATGTGACTAAAATGAGTGTAGGTGTGGATGTTTGTATGACTTACGAAAGGTATTTCTATTTCAACCTTCCAGAAGTGCAGCAAGCTCTTCATGCTAACAGAACACATTTGCCCTATGGCTGGAGCATGTGCAGCGATGTGCTGAACTACAGCAATAAGGATGGCAACATCAACATCTTGCCATTACTTCAGAGAATTGTAGAGCACAAAATACCAGTTTGGGTGTTCAGTGGAGATCAAGACTCTGTGGTGCCCCTATTGGGCTCCCGAACTCTTGTACGAGAGCTAGCTCATGACATGGGCTTGCATGTCACAGTCCCATACAGCAGCTGGTTCCGCAGAGGGCAGGTTGGAGGCTGGGTAACAGAGTATGGTAATATTCTGACCTTTGCGACGGTGCGAGGAGCATCTCACATGGTGCCATTTGCGCAGCCAGACCG-AGCTCTCGGACTTTTTCAATCATTCGCACTTGGACGGAGACTCCCGAATACAACCCACCCACCTATTAACTAAGTGTACCTACGAAAGGAGCTGAAGATACAAACAAATAGTCTAGGATTTTCAGTTTTGCTACAGAAGATTAGTTCATAAGGGTGTATTAGATGGTCAAATACGAATATTTTATCTATTAGAGAGAACAGGGAAATAATACTAGATTAAATTCTTTATTGTTCTCTATCTGGATTGTCAGATTGCATTCCTGGAAGTCTGGAACATTGAGCAATCTGTATAACTATGTCATTTTA-GGGGTTTTGGGGGCACACTGCATTTTGCAACTGTACCTATCTATGTCTGAGGAATTTCATTAGTGCAAACTGATGGAAAAAGTTGGCTCATTGAAGAAGTTGCTGCCTAAAAAAAAAAAAAAA]
[+] EMBL AK103461 [CCAAGCTTCAACTTCAAGAACCCACCCACTTCTCCTCCTCTTCTCCATCCGCTGCGGCAAGCGCGCAATTCAGTTGCTGCGAGCTCGCTCGCCGGCGACAATGGCGGCGGCGGTGGCGGTGGTGGTTGGTTGCGTTCTTCTTGGTGGTGTGTGGGGGTTCCCGGAGGAGGATTTGGTGGCGCGGCTGCCGGGGCAGCCCGTCGTCGGGTTCAGGCAGTTCGCCGGATACGTCGACGTCGACGAGAAGGCCGGGAGGAGCCTCTTCTACTACTTCGCCGAGGCGGCGGAGGGCGCCGCCGCCAAGCCGCTCACCCTCTGGCTCAACGGAGGTCCTGGATGTTCTTCGGTTGGAGGTGGCGCGTTCACAGAGCTCGGCCCATTTTATCCGAGAGGAGATGGCAGAGGCCTGAGATTGAACAAGAAGTCTTGGAACAAAGTATCCAATCTTCTGTTTGTTGAATCACCGGCTGGAGTTGGATGGTCCTACTCCAACACTTCATCAGATTACAATACTGGCGATGCACAGACC GCTAATGACATGTACAAATTTCTGTT GGGATGGTACAAGAA GTTCCCTG AATACAGGTCAAGAGGGCTACTTCTTAGTGGAGAGAGCTATGCAGGGCATTATATACCGCAACTCACCGATGTACTTCTCACACATAATGAGAAATCAAATGGGTTCAAATTCAACATCAAGGGAGTAGCTATCGGGAATCCGCTTCTCAAGCTTGACAGAGATGTCCCCGCAACATATGAGTATTTCTGGTCCCATGGCATGATCTCTGACGAAATATTTCTATCAATCAGCCACAGTTGTGATTTTGAGGACTATACCTTTAGCAACCCCCACAATGAGAGCAAGTCATGCAATGATGCCATTGCAGAGGCAAACAGTATAGTTGGGGATTATGTGAACAATTACGATGTTATTCTTGATGTGTGCTACCCATCAATTGTGATGCAGGAGCTACGGCTGCGGAAATATGTGACTAAAATGAGTGTAGGTGTGGATGTTTGTATGACTTACGAAAGGTATTTCTATTTCAACCTTCCAGAAGTGCAGCAAGCTCTTCATGCTAACAGAACACATTTGCCCTATGGCTGGAGCATGTGCAGCGATGTGCTGAACTACAGCAATAAGGATGGCAACATCAACATCTTGCCATTACTTCAGAGAATTGTAGAGCACAAAATACCAGTTTGGGTGTTCAGTGGAGATCAAGACTCTGTGGTGCCCCTATTGGGCTCCCGAACTCTTGTACGAGAGCTAGCTCATGACATGGGCTTGCATGTCACAGTCCCATACAGCAGCTGGTTCCGCAGAGGGCAGGTTGGAGGCTGGGTAACAGAGTATGGTAATATTCTGACCTTTGCGACGGTGCGAGGAGCATCTCACATGGTGCCATTTGCGCAGCCAGACCG AGCTCTCGGACTTTTTCAATCATTCGCACTTGGACGGAGACTCCAGAATACAACCCACCCACCTATTAACTAAGTGTACCTACGAAAGGAGCTGAAGATACAAACAAATAGTCTAGGATTTTCAGTTTTGCTACAGAAGATTAGTTCATAAGGGTGTATTAGATGGTCAAATACGAATATTTTATCTATTAGAGAGAACAGGGAAATAATACTAGATTAAATTCTTTATTGTTCTCTATCTGGATTGTCAGATTGCATTCCTGGAAGTCTGGAACATTGAGCAATCTGTATAACTATGTCATTTTA GGGG ]
[+] EMBL OSS0012A [ cgagGTCGGGTTCAGGCAGTTCGCCGGATACGTCGACGTCGACGAGAAGGCCGGGAGGAGCCTCTTCTACTACTTCGCCGAGGCGGCGGAGGGCGCCG CGCCAAGCCGCTCACCCTCTGGCTCAACGGAGGTCCTGGATGTTCTTCGGTTGGAGGTGGCGCGTTCACAGAGCTCGGCCCATTTTATCCGAGAGGAGATGGCAGAGGCCTGAGATTGAACAAGAAGTCTTGGAACAAAGTATCCAATCTTCTGTTTGTTGAATCACCGGCTGGAGTTGGATGGTCCTACTCCAACANTTNATCAGATTACAATACTGGCGATGNACAGACC G TAATGACATGTACAAATTTCTGTT GGGATGGTACAAGAA GTTCCCTGAAATACAGGT ]
[+] EMBL CF323229 [ TTCGCCGGATACGTCGACGTCGACGAGAAGGCCGGGAGGAGCCTCTTCTACTACTTCGCCGAGGCGGCGGAGGGCGCCGCCGCCAAGCCGCTCACCCTCTGGCTCAACGGAGGTCCTGGATGTTCTTCGGTTGGAGGTGGCGCGTTCACAGAGCTCGGCCCATTTTATCCGAGAGGAGATGGCAGAGGCCTGAGATTGAACAAGAAGTCTTGGAACAAAGTATCCAATCTTCTGTTTGTTGAATCACCGGCTGGAGTTGGATGGTCCTACTCCAACACTTCATCAGATTACAATACTGGCGATGCACAGACC GCTAATGACATGTACAAATTTCTGTT GGGATGGTACAAGAA GTTCCCTG AATACAGGTCAAGAGGGCTACTTCTTAGTGGAGAGAGCTATGCAGGGCATTATATACCGCAACTCACCGATGTACTTCTCACACATAATGAGAAATCAAATGGGTTCAAATTCAACATCAAGGGAGTAGCTATCGGGAATCCGCTTCTCAAGCTTGACAGAGATGTCCCCGCAACATATGAGTATTTCTGGTCCCATGGCATGATCTCTGACGAAATATTT ]
[+] EMBL AU062698 [ CAAGCCGCTCACCCTCTGGCTCAACGGAGGTCCTGGNTGTTCTTCGGTTGGAGGTGGCGAGTTCACAGAGCTCGGACCATTTTNTCCGAGAGGAGATGGCAGANGCCTGGGATTGAACAAGAAGTCTTGGAACAAAGTATCCAATCTTCTGTTTGTTGAATCACCGGCTGGAGTTGGATGGTCCTACTCCAACACTTCATCAGATTACAATACTGGCGATGCACAGACCNGCTAATGACATGTACAAATTTCTGTTGGGGNTGGTACAAGAAGGTTCCCTGNAATACAGGTCAAGAGn ]
[+] EMBL AU062761 [ TCACAGTCCCATACAGCAGCTGGTTCCGCAGAGGGCAGGTTNGNGGCTGGGTAACAGAGTATGGTAATATTCTNACCTTTGCGACGGTGCGAGGAGCATNTCACATGGTGCCATTTACGNAG CAGACCGCAGCTCTCGGACTTTTTNAATNATTCGCACTTGGNCGGAGACTCCCGAATACANCCCACCCACCTATTAACTAAGTGTACCTACGTAAGGAGCTGANGATACAAACAA ]
[+] EMBL CA756595 [ GAGTATGGTAATATTCTGACCTTTGCGACGGTGCGAGGAGCATCTCACATGGTGCCATTTGCGCAGCCAGACCG AGCTCTCGGACTTTTTCAATCATTCGCACTTGGACGGAGACTCCCGAATACAACCCACCCACCTATTAACTAAGTGTACCTACNAAAGGAGCTGAAGATACAAACAAATAGTCTAGGATTTTCAGTTTTGCTACAGAAGATTAGTTCATAAGGGTGTTTTAGATGGTCAAATACGAATATTTTATCTATTAGAGAGAACAGGGAAATAATACTAGATTAAATTCTTTATTGTTCTCTATCTGGATTGTCAGATTGCATTCCTGGAAGTCTGGAACATTGAGCAATCTGTATAACTATGTCATTTTANGGGGTTTTGGGGGCACACTGCATTTTGCAACTGTACCTATCTATGTCTGAGGAATTTCATTAGTGCAAACTGATGGAAAAGGTTGGCTCATTGAAGAAGTTGCTGCCT ]
[+] EMBL AU062889 [ TAATATTCTGACCTTTGCGACGGTGCGAGGAGCATCTCACATGGTGCCATTTGCGCAGCANGACCG AGCTCTCGGACTTTTTCAATCATTCGCACTTGGACGGAGACTCCCGAATACAACCCACCCACCTATTAACTAAGTGTACCTACGAAAGGAGCTGAAGATACAAACAAATAGTCTAGGATTTTCAGTTTTGCTACAGAAGATTAGTTCATAAGGGTGTATTAGATGGTCAAATACGAATATTTTATCTATTAGAGAGAACAGGGAAATAATACTAGATTAA ]
[+] EMBL AU222685 [ CGACGGTGCGAGGAGCATCTCACATGGTGCCATTTGCGCAGCCAGACCG AGCTCTCGGACTTTTTCAATCATTCGCACTTGGACGGAGACTCCCGAATACAACCCACCCACCTATTAACTAAGTGTACCTACGAAAGGAGCTGAAGATACAAACAAATAGTCTAGGATTTTCAGTTTTGCTACAGAAGATTAGTTCATAAGGGTGTATTAGATGGTCAAATACGAATATTTTATCTATTAGAGAGAACAGGGAAATAATACTAGATTAAATTCTTTATTGTTCTCTATCTGGATTGTCAGATTGCATTCCTGGAAGTCTGGAACATTGAGCAATCTGTATAACTATGTCATTTTA GGGGTTTTGGGGGCACACTGCATTTTGCAACTGTACCTATCTATGTCTGAGGAATTTCATTAGTGCAAACTGATGGAAAAAGTTGGCTCAaaaaaaa ]
[+] EMBL AU166571 [ GCGCAGCCAGACCG AGCTCTCGGACTTTTTCAATCATTCGCACTTGGACGGAGACTCCCGAATACAACCCACCCACCTATTAACTAAGTGTACCTACGAAAGGAGCTGAAGATACAAACAAATAGTCTAGGATTTTCAGTTTTGCTACAGAAGATTAGTTCATAAGGGTGTATTAGATGGTCAAATACGAATATTTTATCTATTAGAGAGAACAGGGAAATAATACTAGATTAAATTCTTTATTGTTCTCTATCTGGATTGTCAGATTGCATTCCTGGAAGTNTGGAACATTGAGCAATCTGTATAACTATGTCATTTTA GGGGTTTTGGGGGCACACTGCATTTTGCAACTGNACCTATCTATGTCTGAGGAATTTCATTAGTGCAAACTGATGGAAAAAGTTGGCTCATTGAAGAAGTTGCTGCCTAAAAAAAAAAAAAAA]
consensusID : consensus_14114#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 623 fasta sequence
[GAAGTTTANTGGGTAAATATNTCTGACCTTTGCGGACGGTGCGGAAGGAGCATCTCACATGGTGCCATTTGCCGCAGCCAGACTCGAGCTCTCGGACCTTTTTCAATCATTCGCACTTGGACGGAGACTCCCCGAATACAACCCACCCTACCTATTAACTTAACGTGTACCTACGAAAGGATGCTGAAGATCACATACCTAATAGTGCTAGGATTGTTCAGTTTTGCTACAGAAGATTAGTTCATAAGGGTGTGATTGAGCATGGGTCCAAATACGAATATTTTGATGCTGATGTAGACGAGAACAGGGATAATTAATGACTAGATTCAAATGTGCTTTGTATTCGTTGCTCTATCTGGATTGTCACGATTGCATTCCTGGAAGTCCTGGAACCCTGACGCAATCTGTATAACTATGTCATGTTTAGGGGTTTTCGGCGGGCACACTGCATTTNTGCAACTTTACCTATTCTATGTCTGAGGAATTTCATTAGTGCNAACTGATGGAAAAGGTTGGCTCATTGAAGAAGTNGCTGCCTAAATTTTAGAATGTAATGTTCTAATTGAGTCTATCTAATTGGAGTATTCGTGATTATACATATGCTCGGGATCTTACTGAAAAAA]
[+] EMBL BQ907225 [GAAGTTTANTGGGTAAATATNTCTGACCTTTGCGGACGGTGCGGAAGGAGCATCTCACATGGTGCCATTTGCCGCAGCCAGACTCGAGCTCTCGGACCTTTTTCAATCATTCGCACTTGGACGGAGACTCCCCGAATACAACCCACCCTACCTATTAACTTAACGTGTACCTACGAAAGGATGCTGAAGATCACATACCTAATAGTGCTAGGATTGTTCAGTTTTGCTACAGAAGATTAGTTCATAAGGGTGTGATTGAGCATGGGTCCAAATACGAATATTTTGATGCTGATGTAGACGAGAACAGGGATAATTAATGACTAGATTCAAATGTGCTTTGTATTCGTTGCTCTATCTGGATTGTCACGATTGCATTCCTGGAAGTCCTGGAACCCTGACGCAATCTGTATAACTATGTCATGTTTAGGGGTTTTCGGCGGGCACACTGCATTTNTGCAACTTTACCTATTCTATGTCTGAGGAATTTCATTAGTGCNAACTGATGGAAAAGGTTGGCTCATTGAAGAAGTNGCTGCCTAAATTTTAGAATGTAATGTTCTAATTGAGTCTATCTAATTGGAGTATTCGTGATTATACATATGCTCGGGATCTTACTGAAAAAA]
consensusID : consensus_14114#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 476 fasta sequence
[TCAAGTGGAGATCAAGACTCTGTGGGCCCCTATTGGGCTCCCGAACTCTTGTACGAGAGCTAGCTCATGACACTGGGCTTGCATGTCACAGTCCCATACAGCAGCTGGTTCCCCAGAGGCCCGTTGGAGCTGGGTACCCGAGTATGGTAATATTCTGACCTTTGCGACGGTGCGAGGACACATCTCACCTGGTCCCCATTTGCGCAGCCCAGACCGAGCTTCTCGGACATTTTTCAATCATTCGCACTTGGACGGAGACTCCCGAATCAAACCCCACCCCCCTATTAACTAAGTGTACCTACGAAAGGAGCTGAAGATCACCACACCAAATAGTCTAGGATTTCTCCAGTTTTGCTCACCAGAAGATTAGTTCATAAGGGTGTATTAGATGGCTCCAAATACGAATATTTTATCTATTAGAGAGACCCGGGAAATAATACTAAATTAAATTCTTTATTTTTCTCTTAAAAAAAAAA]
[+] EMBL BI797155 [TCAAGTGGAGATCAAGACTCTGTGGGCCCCTATTGGGCTCCCGAACTCTTGTACGAGAGCTAGCTCATGACACTGGGCTTGCATGTCACAGTCCCATACAGCAGCTGGTTCCCCAGAGGCCCGTTGGAGCTGGGTACCCGAGTATGGTAATATTCTGACCTTTGCGACGGTGCGAGGACACATCTCACCTGGTCCCCATTTGCGCAGCCCAGACCGAGCTTCTCGGACATTTTTCAATCATTCGCACTTGGACGGAGACTCCCGAATCAAACCCCACCCCCCTATTAACTAAGTGTACCTACGAAAGGAGCTGAAGATCACCACACCAAATAGTCTAGGATTTCTCCAGTTTTGCTCACCAGAAGATTAGTTCATAAGGGTGTATTAGATGGCTCCAAATACGAATATTTTATCTATTAGAGAGACCCGGGAAATAATACTAAATTAAATTCTTTATTTTTCTCTTAAAAAAAAAA]
consensusID : consensus_14114#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 442 fasta sequence
[GCATCTCACATGGTGCCATTTGCGCAGCCAGACCGAGCTCTCGGACTTTTTCAATCATTCGCACTTGGACGGAGACTCCCGAATACAACCCACCCNCCTATTAACTAAGTGTACCTACGAAAGGAGCTGAAGATACAAACAAATAGTCTAGGATTTTCAGTTTTGCTACAGAAGATTAGTTCATAAGGGTGTATTAGATGGTCAAATACGAATATTTTATCTATTAGAGAGAACAGGGAAATAATACTAGATTAAATTCTTTATTGTTCTCTATCTGGATTGTCAGATTGCATTCCTGGAAGTCTGGAACATTGAGCNATCTGTATAACTATGTCATTTTAGGGGTTTTGGGGGCACACTGCATTTTGCAACTGTACCTATCTATGTNTGAGGAATTTCATTAGTGCAAACTGATGGAAAAAGTTGGCTCAAAAAAAAAAAA]
[+] EMBL AU166669 [GCATCTCACATGGTGCCATTTGCGCAGCCAGACCGAGCTCTCGGACTTTTTCAATCATTCGCACTTGGACGGAGACTCCCGAATACAACCCACCCNCCTATTAACTAAGTGTACCTACGAAAGGAGCTGAAGATACAAACAAATAGTCTAGGATTTTCAGTTTTGCTACAGAAGATTAGTTCATAAGGGTGTATTAGATGGTCAAATACGAATATTTTATCTATTAGAGAGAACAGGGAAATAATACTAGATTAAATTCTTTATTGTTCTCTATCTGGATTGTCAGATTGCATTCCTGGAAGTCTGGAACATTGAGCNATCTGTATAACTATGTCATTTTAGGGGTTTTGGGGGCACACTGCATTTTGCAACTGTACCTATCTATGTNTGAGGAATTTCATTAGTGCAAACTGATGGAAAAAGTTGGCTCAAAAAAAAAAAA]
consensusID : consensus_14114#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 271 fasta sequence
[AACTTCAAGAACCCACCCACTTCTCCTCCTCTTCTCCATCCGCTGCGGCAAGGCGCANATTCAGTTGCTGCGAGCTCGCTCNGNGTCGACAATGGCGGCGGNTNGGCGGTGGTGGTTGGTTGCGTTCTTCTTGGTGGTGTGTGGGGGTTCCCGGAGAGGATTTGGTGGCGCGGCTGCCGGGGCACGTNCGTTCGGGTTCAGGCAGTTCGCCGGNATACGTCGACGTCGANATGAAGGCCGGGAGAGCCTCTTCTACTACTTCGCCGAGGCG]
[+] EMBL C27220 [AACTTCAAGAACCCACCCACTTCTCCTCCTCTTCTCCATCCGCTGCGGCAAGGCGCANATTCAGTTGCTGCGAGCTCGCTCNGNGTCGACAATGGCGGCGGNTNGGCGGTGGTGGTTGGTTGCGTTCTTCTTGGTGGTGTGTGGGGGTTCCCGGAGAGGATTTGGTGGCGCGGCTGCCGGGGCACGTNCGTTCGGGTTCAGGCAGTTCGCCGGNATACGTCGACGTCGANATGAAGGCCGGGAGAGCCTCTTCTACTACTTCGCCGAGGCG]
consensusID : consensus_14114#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 252 fasta sequence
[CGGACTTTTTCAATCATTCGCACTTGGNCGGAGACTCCCGAATACAACCCNCCCNCCTATTAACTAAGTGTNCCTACGAAAGGAGCTGAAGATACAAACAAATAGTCTAGGATTTTCAGTTTTGCTACAGAAGATTAGTTCATAAGGGTGTATTAGATGGTCAAATACGAATATTTTATCTATTAGAGAGAACAGGGAAATAATACTAGATTAAATTCTTTATTGTTCTCAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU092482 [CGGACTTTTTCAATCATTCGCACTTGGNCGGAGACTCCCGAATACAACCCNCCCNCCTATTAACTAAGTGTNCCTACGAAAGGAGCTGAAGATACAAACAAATAGTCTAGGATTTTCAGTTTTGCTACAGAAGATTAGTTCATAAGGGTGTATTAGATGGTCAAATACGAATATTTTATCTATTAGAGAGAACAGGGAAATAATACTAGATTAAATTCTTTATTGTTCTCAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_14114#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 242 fasta sequence
[ACGAGGNTTGCATGTCACAGTCCCATACAGCAGCTGGTTCCGCAGAGGGCAGGTTNGAGGNTGGGTAACAGAGTATGGTAATATTCTGACCTTTGCGACGGTGCGAGGAGCATCTCACATGGTGCCATTTGCGNAGCAGACCGAGCTNTNGGACTNTTNCAATCATTCGNACTTGGACGNAGACTNCCGGAATACANCCCACCCCACCTATTTAACCTAAGGTGTTACCTNCGGAAGGAAGC]
[+] EMBL AU068615 [ACGAGGNTTGCATGTCACAGTCCCATACAGCAGCTGGTTCCGCAGAGGGCAGGTTNGAGGNTGGGTAACAGAGTATGGTAATATTCTGACCTTTGCGACGGTGCGAGGAGCATCTCACATGGTGCCATTTGCGNAGCAGACCGAGCTNTNGGACTNTTNCAATCATTCGNACTTGGACGNAGACTNCCGGAATACANCCCACCCCACCTATTTAACCTAAGGTGTTACCTNCGGAAGGAAGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14114#1 ------------------------------------------------------------
consensus_14114#3 ------------------------------------------------------------
consensus_14114#5 ------------------------------------------------------------
consensus_14114#2 ------------------------------------------------------------
consensus_14114#6 ------------------------------------------------------------
consensus_14114#0 CCAAGCTTCAACTTCAAGAACCCACCCACTTCTCCTCCTCTTCTCCATCCGCTGCGGCAA 60
consensus_14114#4 ------------------------------------------------------------
consensus_14114#1 ------------------------------------------------------------
consensus_14114#3 ------------------------------------------------------------
consensus_14114#5 ------------------------------------------------------------
consensus_14114#2 ------------------------------------------------------------
consensus_14114#6 ------------------------------------------------------------
consensus_14114#0 GCGCGCAATTCAGTTGCTGCGAGCTCGCTCGCCGGCGACAATGGCGGCGGCGGTGGCGGT 120
consensus_14114#4 ------------------------------------------------------------
consensus_14114#1 ------------------------------------------------------------
consensus_14114#3 ------------------------------------------------------------
consensus_14114#5 ------------------------------------------------------------
consensus_14114#2 ------------------------------------------------------------
consensus_14114#6 ------------------------------------------------------------
consensus_14114#0 GGTGGTTGGTTGCGTTCTTCTTGGTGGTGTGTGGGGGTTCCCGGAGGAGGATTTGGTGGC 180
consensus_14114#4 ------------------------------------------------------------
consensus_14114#1 ------------------------------------------------------------
consensus_14114#3 ------------------------------------------------------------
consensus_14114#5 ------------------------------------------------------------
consensus_14114#2 ------------------------------------------------------------
consensus_14114#6 ------------------------------------------------------------
consensus_14114#0 GCGGCTGCCGGGGCAGCCCGTCGTCGGGTTCAGGCAGTTCGCCGGATACGTCGACGTCGA 240
consensus_14114#4 ------------------------------------------------------------
consensus_14114#1 ------------------------------------------------------------
consensus_14114#3 ------------------------------------------------------------
consensus_14114#5 ------------------------------------------------------------
consensus_14114#2 ------------------------------------------------------------
consensus_14114#6 ------------------------------------------------------------
consensus_14114#0 CGAGAAGGCCGGGAGGAGCCTCTTCTACTACTTCGCCGAGGCGGCGGAGGGCGCCGCCGC 300
consensus_14114#4 ------------------------------------------------------------
consensus_14114#1 ------------------------------------------------------------
consensus_14114#3 ------------------------------------------------------------
consensus_14114#5 ------------------------------------------------------------
consensus_14114#2 ------------------------------------------------------------
consensus_14114#6 ------------------------------------------------------------
consensus_14114#0 CAAGCCGCTCACCCTCTGGCTCAACGGAGGTCCTGGATGTTCTTCGGTTGGAGGTGGCGC 360
consensus_14114#4 ------------------------------------------------------------
consensus_14114#1 ------------------------------------------------------------
consensus_14114#3 ------------------------------------------------------------
consensus_14114#5 ------------------------------------------------------------
consensus_14114#2 ------------------------------------------------------------
consensus_14114#6 ------------------------------------------------------------
consensus_14114#0 GTTCACAGAGCTCGGCCCATTTTATCCGAGAGGAGATGGCAGAGGCCTGAGATTGAACAA 420
consensus_14114#4 ------------------------------------------------------------
consensus_14114#1 ------------------------------------------------------------
consensus_14114#3 ------------------------------------------------------------
consensus_14114#5 ------------------------------------------------------------
consensus_14114#2 ------------------------------------------------------------
consensus_14114#6 ------------------------------------------------------------
consensus_14114#0 GAAGTCTTGGAACAAAGTATCCAATCTTCTGTTTGTTGAATCACCGGCTGGAGTTGGATG 480
consensus_14114#4 ------------------------------------------------------------
consensus_14114#1 ------------------------------------------------------------
consensus_14114#3 ------------------------------------------------------------
consensus_14114#5 ------------------------------------------------------------
consensus_14114#2 ------------------------------------------------------------
consensus_14114#6 ------------------------------------------------------------
consensus_14114#0 GTCCTACTCCAACACTTCATCAGATTACAATACTGGCGATGCACAGACCGCTAATGACAT 540
consensus_14114#4 ------------------------------------------------------------
consensus_14114#1 ------------------------------------------------------------
consensus_14114#3 ------------------------------------------------------------
consensus_14114#5 ------------------------------------------------------------
consensus_14114#2 ------------------------------------------------------------
consensus_14114#6 ------------------------------------------------------------
consensus_14114#0 GTACAAATTTCTGTTGGGATGGTACAAGAAGTTCCCTGAATACAGGTCAAGAGGGCTACT 600
consensus_14114#4 ------------------------------------------------------------
consensus_14114#1 ------------------------------------------------------------
consensus_14114#3 ------------------------------------------------------------
consensus_14114#5 ------------------------------------------------------------
consensus_14114#2 ------------------------------------------------------------
consensus_14114#6 ------------------------------------------------------------
consensus_14114#0 TCTTAGTGGAGAGAGCTATGCAGGGCATTATATACCGCAACTCACCGATGTACTTCTCAC 660
consensus_14114#4 ------------------------------------------------------------
consensus_14114#1 ------------------------------------------------------------
consensus_14114#3 ------------------------------------------------------------
consensus_14114#5 ------------------------------------------------------------
consensus_14114#2 ------------------------------------------------------------
consensus_14114#6 ------------------------------------------------------------
consensus_14114#0 ACATAATGAGAAATCAAATGGGTTCAAATTCAACATCAAGGGAGTAGCTATCGGGAATCC 720
consensus_14114#4 ------------------------------------------------------------
consensus_14114#1 ------------------------------------------------------------
consensus_14114#3 ------------------------------------------------------------
consensus_14114#5 ------------------------------------------------------------
consensus_14114#2 ------------------------------------------------------------
consensus_14114#6 ------------------------------------------------------------
consensus_14114#0 GCTTCTCAAGCTTGACAGAGATGTCCCCGCAACATATGAGTATTTCTGGTCCCATGGCAT 780
consensus_14114#4 ------------------------------------------------------------
consensus_14114#1 ------------------------------------------------------------
consensus_14114#3 ------------------------------------------------------------
consensus_14114#5 ------------------------------------------------------------
consensus_14114#2 ------------------------------------------------------------
consensus_14114#6 ------------------------------------------------------------
consensus_14114#0 GATCTCTGACGAAATATTTCTATCAATCAGCCACAGTTGTGATTTTGAGGACTATACCTT 840
consensus_14114#4 ------------------------------------------------------------
consensus_14114#1 ------------------------------------------------------------
consensus_14114#3 ------------------------------------------------------------
consensus_14114#5 ------------------------------------------------------------
consensus_14114#2 ------------------------------------------------------------
consensus_14114#6 ------------------------------------------------------------
consensus_14114#0 TAGCAACCCCCACAATGAGAGCAAGTCATGCAATGATGCCATTGCAGAGGCAAACAGTAT 900
consensus_14114#4 ------------------------------------------------------------
consensus_14114#1 ------------------------------------------------------------
consensus_14114#3 ------------------------------------------------------------
consensus_14114#5 ------------------------------------------------------------
consensus_14114#2 ------------------------------------------------------------
consensus_14114#6 ------------------------------------------------------------
consensus_14114#0 AGTTGGGGATTATGTGAACAATTACGATGTTATTCTTGATGTGTGCTACCCATCAATTGT 960
consensus_14114#4 ------------------------------------------------------------
consensus_14114#1 ------------------------------------------------------------
consensus_14114#3 ------------------------------------------------------------
consensus_14114#5 ------------------------------------------------------------
consensus_14114#2 ------------------------------------------------------------
consensus_14114#6 ------------------------------------------------------------
consensus_14114#0 GATGCAGGAGCTACGGCTGCGGAAATATGTGACTAAAATGAGTGTAGGTGTGGATGTTTG 1020
consensus_14114#4 ------------------------------------------------------------
consensus_14114#1 ------------------------------------------------------------
consensus_14114#3 ------------------------------------------------------------
consensus_14114#5 ------------------------------------------------------------
consensus_14114#2 ------------------------------------------------------------
consensus_14114#6 ------------------------------------------------------------
consensus_14114#0 TATGACTTACGAAAGGTATTTCTATTTCAACCTTCCAGAAGTGCAGCAAGCTCTTCATGC 1080
consensus_14114#4 ------------------------------------------------------------
consensus_14114#1 ------------------------------------------------------------
consensus_14114#3 ------------------------------------------------------------
consensus_14114#5 ------------------------------------------------------------
consensus_14114#2 ------------------------------------------------------------
consensus_14114#6 ------------------------------------------------------------
consensus_14114#0 TAACAGAACACATTTGCCCTATGGCTGGAGCATGTGCAGCGATGTGCTGAACTACAGCAA 1140
consensus_14114#4 ------------------------------------------------------------
consensus_14114#1 ------------------------------------------------------------
consensus_14114#3 ------------------------------------------------------------
consensus_14114#5 ------------------------------------------------------------
consensus_14114#2 ------------------------------------------------------------
consensus_14114#6 ------------------------------------------------------------
consensus_14114#0 TAAGGATGGCAACATCAACATCTTGCCATTACTTCAGAGAATTGTAGAGCACAAAATACC 1200
consensus_14114#4 ------------------------------------------------------------
consensus_14114#1 ------------------------------------------------------------
consensus_14114#3 ------------------------------------------------------------
consensus_14114#5 ------------------------------------------------------------
consensus_14114#2 -----------TCAAGTGGAGATCAAGACTCTGTGGGCCCCTATTGGGCTCCCGAACTCT 49
consensus_14114#6 ------------------------------------------------------------
consensus_14114#0 AGTTTGGGTGTTCAGTGGAGATCAAGACTCTGTGGTGCCCCTATTGGGCTCCCGAACTCT 1260
consensus_14114#4 ------------------------------------------------------------
consensus_14114#1 ------------------------------------------------------------
consensus_14114#3 ------------------------------------------------------------
consensus_14114#5 ------------------------------------------------------------
consensus_14114#2 TGTACGAGAGCTAGCTCATGACACTGGGCTTGCATGTCACAGTCCCATACAGCAGCTGGT 109
consensus_14114#6 ----------------------ACGAGGNTTGCATGTCACAGTCCCATACAGCAGCTGGT 38
consensus_14114#0 TGTACGAGAGCTAGCTCATGACATG-GGCTTGCATGTCACAGTCCCATACAGCAGCTGGT 1319
consensus_14114#4 ------------------------------------------------------------
consensus_14114#1 ------------------------GAAGTTTANTGGGTAAATATNTCTGACCTTTGCGGA 36
consensus_14114#3 ------------------------------------------------------------
consensus_14114#5 ------------------------------------------------------------
consensus_14114#2 TCCCCAGAGGCCCG--TTGGAGCTGGGTACCCGAGTATGGTAATATTCTGACCTTTGCGA 167
consensus_14114#6 TCCGCAGAGGGCAGGTTNGAGGNTGGGTAACAGAGTATGGTAATATTCTGACCTTTGCGA 98
consensus_14114#0 TCCGCAGAGGGCAGGTTGGAGGCTGGGTAACAGAGTATGGTAATATTCTGACCTTTGCGA 1379
consensus_14114#4 ------------------------------------------------------------
consensus_14114#1 CGGTGCGGAAGGAGCATCTCACATGGTGCCATTTGCCGCAGCCAGACTCGAGCTC-TCGG 95
consensus_14114#3 -------------GCATCTCACATGGTGCCATTTGC-GCAGCCAGAC-CGAGCTC-TCGG 44
consensus_14114#5 ---------------------------------------------------------CGG 3
consensus_14114#2 CGGTGCGAGGAC-ACATCTCACCTGGTCCCCATTTGCGCAGCCCAGACCGAGCTTCTCGG 226
consensus_14114#6 CGGTGCGAGGA--GCATCTCACATGGTGCC-ATTTGCGNAGC--AGACCGAGCTN-TNGG 152
consensus_14114#0 CGGTGCGAGGA--GCATCTCACATGGTGCC-ATTTGCGCAGCC-AGACCGAGCTC-TCGG 1434
consensus_14114#4 ------------------------------AACTTCAAGAACCCA---CCCACTTCTCCT 27
consensus_14114#1 ACCTTTTTCAATCATTCGCACTTGGACGGAGACTCCCCGAATACAACCCACCCTACCTAT 155
consensus_14114#3 AC-TTTTTCAATCATTCGCACTTGGACGGAGACTCCC-GAATACAACCCACCCN-CCTAT 101
consensus_14114#5 AC-TTTTTCAATCATTCGCACTTGGNCGGAGACTCCC-GAATACAACCCNCCCN-CCTAT 60
consensus_14114#2 ACATTTTTCAATCATTCGCACTTGGACGGAGACTCCCGAATCAAACCCCACCCC-CCTAT 285
consensus_14114#6 AC-TNTTNCAATCATTCGNACTTGGACGNAGACTNCCGGAATACANCCCACCCCACCTAT 211
consensus_14114#0 AC-TTTTTCAATCATTCGCACTTGGACGGAGACTCCC-GAATACAACCCACCCA-CCTAT 1491
consensus_14114#4 CCTCTTCTCCATCCGCTGCGGCAAGGCGCANATTC---AGTTGCTGCGAGCTCGCTCNGN 84
* * * *** * * ** * * * * * * *
consensus_14114#1 T-AACTTAACGTGT-ACCTACGAAAGGATGCTGAAGATCACATACCTAATAGTGCTAGGA 213
consensus_14114#3 T-AACTAA--GTGT-ACCTACGAAAGGA-GCTGAAGAT-ACAAACA-AATAGT-CTAGGA 153
consensus_14114#5 T-AACTAA--GTGT-NCCTACGAAAGGA-GCTGAAGAT-ACAAACA-AATAGT-CTAGGA 112
consensus_14114#2 T-AACT--AAGTGT-ACCTACGAAAGGAGCTGAAGATCACCACACCAAATAGTCTAGGAT 341
consensus_14114#6 TTAACCTAAGGTGTTACCTNCGGAAGGAAGC----------------------------- 242
consensus_14114#0 T-AACTAA--GTGT-ACCTACGAAAGGA-GCTGAAGAT-ACAAACA-AATAGT-CTAGGA 1543
consensus_14114#4 GTCGACAATGGCGG--CGGNTNGGCGGTGGTGGTTGGTTGCGTTCTTCTTGGT----GGT 138
* * * **
consensus_14114#1 TTGTTCAGTTTTGCTA--CAGAAGATTAGTTCATAAGGGTGTGATTGAGCATGGGTCCAA 271
consensus_14114#3 TT-TTCAGTTTTGCTA--CAGAAGATTAGTTCATAAGGGTGTATTAGA---TGG--TCAA 205
consensus_14114#5 TT-TTCAGTTTTGCTA--CAGAAGATTAGTTCATAAGGGTGTATTAGA---TGG--TCAA 164
consensus_14114#2 TTCTCCAGTTTTGCTCACCAGAAGATTAGTTCATAAGGGTGTATTAGA---TGGCTCCAA 398
consensus_14114#6 ------------------------------------------------------------
consensus_14114#0 TT-TTCAGTTTTGCTA--CAGAAGATTAGTTCATAAGGGTGTATTAGA---TGG--TCAA 1595
consensus_14114#4 GTGTGGGGGTTCCCGG---AGAGGATTTGGTGGCGCGGCTGCCGGGGCACGTNCGTTCGG 195
consensus_14114#1 ATACGAATATTTTGATGCTGATGTAGACGAGAACAGGGATAATTAATGACTAGATTCAAA 331
consensus_14114#3 ATACGAATATTTTATC-----TATTAGAGAGAACAGGG--AAATAAT-ACTAGATTAAAT 257
consensus_14114#5 ATACGAATATTTTATC-----TATTAGAGAGAACAGGG--AAATAAT-ACTAGATTAAAT 216
consensus_14114#2 ATACGAATATTTTATC-----TATTAGAGAGACCCGGG--AAATAAT-ACTAAATTAAAT 450
consensus_14114#6 ------------------------------------------------------------
consensus_14114#0 ATACGAATATTTTATC-----TATTAGAGAGAACAGGG--AAATAAT-ACTAGATTAAAT 1647
consensus_14114#4 GTTCAGGCAGTTCGCC-----GGNATACGTCGACGTCG--ANATGAAGGCCGGGAGAGCC 248
consensus_14114#1 TGTGCTTTGTATTCGTTGCTCTATCTGGATTGTCACGATTGCATTCCTGGAAGTCCTGGA 391
consensus_14114#3 T---CTTTAT---TGTT-CTCTATCTGGATTGTCA-GATTGCATTCCTGGAAGTC-TGGA 308
consensus_14114#5 T---CTTTAT---TGTT-CTCAAAAAAAAAAAAAAAAAAAAAA----------------- 252
consensus_14114#2 T---CTTTATTTTTCTCTTAAAAAAAAAA------------------------------- 476
consensus_14114#6 ------------------------------------------------------------
consensus_14114#0 T---CTTTAT---TGTT-CTCTATCTGGATTGTCA-GATTGCATTCCTGGAAGTC-TGGA 1698
consensus_14114#4 T---CTTCTACTACTTCGCCGAGGCG---------------------------------- 271
consensus_14114#1 ACCCTGACGCAATCTGTATAACTATGTCATGTTTAGGGGTTTTCGGCGGGCACACTGCAT 451
consensus_14114#3 ACATTGA-GCNATCTGTATAACTATGTCAT-TTTAGGGGTTTTGGG--GGCACACTGCAT 364
consensus_14114#5 ------------------------------------------------------------
consensus_14114#2 ------------------------------------------------------------
consensus_14114#6 ------------------------------------------------------------
consensus_14114#0 ACATTGA-GCAATCTGTATAACTATGTCAT-TTTAGGGGTTTTGGG--GGCACACTGCAT 1754
consensus_14114#4 ------------------------------------------------------------
consensus_14114#1 TTNTGCAACTTTACCTATTCTATGTCTGAGGAATTTCATTAGTGCNAACTGATGGAAAAG 511
consensus_14114#3 TTT-GCAACTGTACCTAT-CTATGTNTGAGGAATTTCATTAGTGCAAACTGATGGAAAAA 422
consensus_14114#5 ------------------------------------------------------------
consensus_14114#2 ------------------------------------------------------------
consensus_14114#6 ------------------------------------------------------------
consensus_14114#0 TTT-GCAACTGTACCTAT-CTATGTCTGAGGAATTTCATTAGTGCAAACTGATGGAAAAA 1812
consensus_14114#4 ------------------------------------------------------------
consensus_14114#1 GTTGGCTCATTGAAGAAGTNGCTGCCTAAATTTTAGAATGTAATGTTCTAATTGAGTCTA 571
consensus_14114#3 GTTGGCTCAAAAAAAAAAAA---------------------------------------- 442
consensus_14114#5 ------------------------------------------------------------
consensus_14114#2 ------------------------------------------------------------
consensus_14114#6 ------------------------------------------------------------
consensus_14114#0 GTTGGCTCATTGAAGAAGTTGCTGCCTAAAAAAAAAAAAAAA------------------ 1854
consensus_14114#4 ------------------------------------------------------------
consensus_14114#1 TCTAATTGGAGTATTCGTGATTATACATATGCTCGGGATCTTACTGAAAAAA 623
consensus_14114#3 ----------------------------------------------------
consensus_14114#5 ----------------------------------------------------
consensus_14114#2 ----------------------------------------------------
consensus_14114#6 ----------------------------------------------------
consensus_14114#0 ----------------------------------------------------
consensus_14114#4 ----------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||