These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14118#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1744 fasta sequence [TTTTTTTTTTTGGAGAAATTAACCTTGATCTCTGTTTCGTAGTCCCCAACATATAGGATTATTTCGTTAGTACAAACACGGAAGCCAGATATAATGGAGGGTTTGCAAACCAAATTTCTACGCCCTTCGTCCCAAAATAAGTTGAACTACACGCTGAGTTTATTTTGAGACAGAGTGAGTAATAACTAAACACAGCCACACAGGTACTACAAACACTTGCCAATGATGCATGCAAAATAAACTGCACCAAGTTAACAATAACACAAACTGGAGTTTCAGGCTAAGTTACATTAGTTATTTCGCGCTCTCACCTCAACCGTGACAACAACGTTCATCGCAACAGGGAAAATCTAGCACGCATAAATAGAAAACCGCTACTTGCCAACTACGTGCTTCTCATATAAGGCGACGATGTCCTTCTTGTTGGGATTCTTCAGTTGCAGGAGTTGAGCACCAAACCCATGCTTAGTGAGCTCCTGCTTCAGCTTCAGCACAGTGAACTTGATGTAGTCTTCAGTCTCCGTCTCCTGCGCTTGCTGGCTCCCGTTGTTAGTGTCTTCTCCTACAAATACAGAGCCACCGTCCTCGGTGTGATTGCTCTTAAACGGGCTCGTCGTGCTTTTTGATCGTTTCCTTCGCCTGCCAGTGTTGTCATCGTCGATATCCATATCATGGACAGACTCAGTAGCTTCACCCCTCAGGCGCCTTGCATGTGAGGCCTTAAGCTTGCTGTCCAGTGCGGTTTCATTGAACCGAACAGATGTCAGCTCTTGTTGGAGCATATCTAACTTGCTTTGAGTTGCCTGCAACTGCAGTGACAGAGCCTCAGCTCTCCTATTGGCCTCAGCGCAGGCTTCTCGTTCTGTCTCCAGTAGACTCTCAAGAACTTGAACTGTACTGGACCTTTGCTGGTTGCTCCGTTGCATCATCTCATCAATTTCCTTTTCCCGCTCGTCAACCCTTTGTTCAAGCGATGAAACCTTACATACAGCATCCTCGTCAGACTGACCAACTCGCTCAATTTCTTCCAGCATCTTATTCTTCTCTCTCTCCAGACCTTCAACCTGTCTCTCCATTCTTTCTATTAACGCAAGTCTCTCCATTGCTAGCCTCTGCGCTTCACCCTTATCCTTCTGGGAAGCAACAGCTTCTGCACGAGCTACGTCAGCCAATTCCGTTGCTCGTTTAGCCTCCCTTTCAGCTTCCTTGCACCGGCTGTCTGCCTCATCAAACCTCTTGCACTCTGTTAGATACTTCTCCTGAAGATGGTTTTTTTCTTGTTCCAAGATCTTCACTTCCTTCTCACGTGACTGAGCTTCAGTTCTAAAAGACTCCAAGCTAACAGTCAGTGATCTGATCTCTTCTTTCAAAGCCAGCGAATCTGACTCATGGTTCTTCAACTTTGCTTCAGTAGCCTCAAGCCTTGAGATCAAATTTGTGGCATGAATTTCGGTTTGGTTAATTTTTGTGTTTAATCTTGCGATCTCCTCTTCCTTCTCAGACAGTTGGCTAGCAAGTTCTGCCCTTAAAGCGTCTTCCCTTTCTTGCACTTTCTTATTAGTGCGTTCTTGTGCTACAGCTGCTCTTTGCAGAGCTGTTTTTGCCTCACTTACAGCAACTTCATATTTCCGTTTCCACTCCGATGCCTCTTCTTGAGCAGACTCAGCCTGTTCTCGCACAGCAGATAATCTGCCCTCACTGATATTTACCCTGGATTCCAGAGAAGCAATTTGAGACTTTAACT] [+] EMBL CA762426 [TTTTTTTTTTTGGAGAAATTAACCTTGATCTCTGTTTCGTAGTCCCCAACATATAGGATTATTTCGTTAGTACAAACACGGAAGCCAGATATAATGGAGGGTTTGCAAACCAAATTTCTACGCCCTTCGTCCCAAAATAAGTTGAACTACACGCTGAGTTTATTTTGAGACAGAGTGAGTAATAACTAAACACAGCCACACAGGTACTACAAACACTTGCCAATGATGCATGCAAAATAAACTGCACCAAGTTAACAATAACACAAACTGGAGTTTCAGGCTAAGTTACATTAGTTATTTCGCGCTCTCACCTCAACCGTGACAACAACGTTCATCGCAACAGGGAAAATCTAGCACGCATAAATAGAAAACCGCTACTTGCCAACTACGTGCTTCTCATATAAGGCGACGATGTCCTTCTTGTTGGGATTCTTCAGTTGCAGGAGTTGAGCACCAAACCCATGCTTAGTGAGCTCCTGCTTCAGCTTCAGCACAGTGAACTTGATGTAGTCTTCAGTCTCCGTCTCCTGCGCTTGCTGGCTCCCGTTGTctcgtc ] [+] EMBL CB644149 [ ATTTCTACGCCCTCCGACCCAAAATAAGTTGAACTACACGCTGAGTTTATTTTGAGACAGAGTGAGTAATAACTAAACACAGCCACACAGGTACTACAAACACTTGCCAATGATGCATGCAAAATAAACTGCACCAAGTTAACAATAACACAAACTGGAGTTTCAGGCTAAGTTACATTAGTTATTTCGCGCTCTCACCTCAACCGTGACAACAACGTTCATCGCAACAGGGAAAATCTAGCACGCATAAATAGAAAACCGCTACTTGCCAACTACGTGCTTCTCATATAAGGCGACGATGTCCTTCTTGTTGGGATTCTTCAGTTGCAGGAGTTGAGCACCAAACCCATGCTTAGTGAGCTCCTGCTTCAGCTTCAGCACAGTGAACTTGGTGTAGTCTTCAGTCTCCGTCTCCTGCGCTTGCTGGCTCCCGTTGTTAGTGTCTTCTCCTACAAATACAGAGCCACCGTCCTCGGTGTGATTGCTCTTAAACGGGCTCGTCGTGCTTTTTGATCGTTTCCTTCGCCTGCCAGTGTTGTCATCGTCGATATCCATATCATGGACAGACTCAGTAGCTTCACCCCTCAGGCGCCTTGCATGTGAGGCCTTAAGCTTGCTGTCCAGTGCGGTTTCATTGAACCGAACAGATGTCAGCTCTTGTTGGAGCATATCTAACTTGCTTTGAGTTGCCTGCAACTGCAGTGACAGAGCCTCAGCTCTCCTATTGGCCTCAGCGCAGGCTTCTCGTTCTGTCTCCAGTAGACTCTCAAGAACTTGAACTGTACTGGACCTTTGCTGGTTGCTCCGTTGCA ] [-] EMBL BI118647 [ CTTGCCAATGATGCATGCAAAATAAACTGCACCAAGTTAACAATAACACAAACTGGAGTTTCAGGCTAAGTTACATTAGTTATTTCGCGCTCTCACCTCAACCGTGACAACAACGTTCATCGCAACAGGGAAAATCTAGCACGCATAAATAGAAAACCGCTACTTGCCAACTACGTGCTTCTCATATAAGGCGACGATGTCCTTCTTGTTGGGATTCTTCAGTTGCAGGAGTTGAGCACCAAACCCATGCTTAGTGAGCTCCTGCTTCAGCTTCAGCACAGTGAACTTGATGTAGTCTTCAGTCTCCGTCTCCTGCGCTTGCTGGCTCCCGTTGTTAGTGTCTTCTCCTACAAATACAGAGCCACCGTCCTCGGTGTGATTGCTCTTAAACGGGCTCGTCGTGCTTTTTGATCGTTTCCTTCGCCTGCCAGTGTTGTCATCGTCGATATCCATATCATGGACAGACTCAGTAGCTTCACCCCTCAGGCGCCTTGCATGTGAGGCCTTAAGCTTGCTGTCCAGTGCGGTTTCATTGAACCGAACAGATGTCAACTCTTGTTGGAGCATATCTAACTTGCTTTGAGTTGCCTGCAACTGCAGTGACAGAGCCTCAGCTCTCCTATTGGCCTCAGCGCAGGCTTCTCGTTCTGTCTCCAGTAGACTCTCAAGAAC ] [-] EMBL BP185022 [ ACAACGTTCATCGCAACAGGGAAAATCTAGCACGCATAAATAGAAAACCGCTACTTGCCAACTACGTGCTTCTCATATAAGGCGACGATGTCCTTCTTGTTGGGATTCTTCAGTTGCAGGAGTTGAGCACCAAACCCATGCTTAGTGAGCTCCTGCTTCAGCTTCAGCACAGTGAACTTGGTGTAGTCTTCAGTCTCCGTCTCCTGCGCTTGCTGGCTCCCGTTGTTAGTGTCTTCTCCTACAAATACAGAGCCACCGTCCTCGGTGTGATTGCTCTTAAACGGGCTCGTCGTGCTTTTTGATCGTTTCCTTCGCCTGCCAGTGTTGTCATCGTCGATATCCATATCATGGACAGACTCAGTAGCTTCACCCCTCAGGCGCCTTGCATGTGAGGCCTTAAGCTTGCTGTCCAGTGCGGTTTCATTGAACCGAACAGATGTCAGCTCTTGTTGGAGCATATCTAACTTGCTTTGAGTTGCCTGCAACTGCAGTGACAGAGCCTCAGCTCTCCTATTGGCCTCAGCGCAGGCTTCTCGTTCTGTCTCCAGTAGACTCTCAAGAACTTGAACTGTACTGGACCTTTGCTGGTTGCTCCGTTGCATCATCTCATCAATTTCCTTTTCCCGCTCGTCAACCCTTTGTTCAAGCGATGAAACCTTACATACAGCATCCTCGT ] [-] EMBL CB644148 [ CTGGACCTTTGCTGGTTGCTCCGTTGCATCATCTCATC ATTTCCTTTTCCCGCTCGTCAACCCTTTGTTCAAGCGATGAAACCTTACATACAGCATCCTTCTCAGACTGACCAACTCGCTCAATTTCTTCCAGCATCTTATTCTTCTCTCTCTCCAGACCTTCAACCTGTCTCTCCATTCTTTCTATTAACGCAAGTCTCTCCATTGCTAGCCTCTGCGCTTCACCCTTATCCTTCTGGGAAGCAACAGCTTCTGCACGAGCTACGTCAGCCAATTCCGTTGCTCGTTTAGCCTCCCTTTCAGCTTCCTTGCACCGGCTGTCTGCCTCATCAAACCTCTTGCACTCTGTTAGATACTTCTCCTGAAGATGGTTTTTTTCTTGTTCCAAGATCTTCACTTCCTTCTCACGTGACTGAGCTTCAGTTCTAAAAGACTCCAAGCTAACAGTCAGTGATCTGATCTCTTCTTTCAAAGCCAGCGAATCTGACTCATGGTTCTTCAACTTTGCTTCAGTAGCCTCAAGCCTTGAGATCAAATTTGTGGCATGAATTTCGGTTTGGTTAATTTTTGTGTTTAATCTTGCGATCTCCTCTTCCTTCTCAGACAGTTGGCTAGCAAGTTCTGCCCTTAAAGCGTCTTCCCTTTCTTGCACTTTCTTATTAGTGCGTTCTTGTGCTACAGCTGCTCTTTGCAGAGCTGTTTTTGCCTCACTTACAGCAACTTCATATTTCCGTTTCCACTCCGATGCCTCTTCTTGAGCAGACTCAGCCTGTTCTCGCACAGCAGATAATCTGCCCTCACTGATATTTACCCTGGATTCCAGAGAAGCAATTTGAGACTTTAACT] consensusID : consensus_14118#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 876 fasta sequence [AGCTCGCCACCAGCCCCGTCGCCGGCAGGCTTGGCCCCGTCTCCCACCGCCGAGGTGACCCCTCCCCCCAGCGCCGCCGCCGTCGTCTACCCCGACGCCGGGTGGGTCGACGCCGCCGCCGTGGCAGCCGTCGACGAGTTCTACTGAGATCGAGGCTGATGAGATTCGTCGACCACCTCATTAATTTATTACCCGTCCATTAAAGGGACTCACCATTCCTACTCCTCCTCTCCTGATCTCCTACTTTTCCTTCTTCATCTGCGGTGGCGGTGTCGAGCTGTTTATTATATACCTCTCTCTATCTATGTTTTGTTTCATTGTATGGGGCATTTTTATTTCCATTCATGCATTTGAGACACCATGTGTGTGGGCGTTTGGCGTGGACAGATTGGTTGGATGGGCTGGTGTTGCGCTGCTTCTACATTGTACTATACATCTTCCGGTGGTTAAAACTCGAAGAGGATGGGGTGTCAAGAGATATCCTATTTGGTGGTTATATAATAATTCTTGAGGGGGGGGCCCGGTTCCCAAATTTGCCCTTAAAAGAAGCCGTATTACCCCTCCCTTGATTGGCCCCTGGTTTTAACAACCTCCTTAATGGGAAAAACCCTTGAGGGTTACCAAACTTTATTCGCTTTTGAAAAAACATACCCCCTTTGGAAAAACCTGGGTTATTTAATAAAAAAGGGCCCTCTCTGTATGGGGCTTTTCCAAATATTTGGGTATGTCTTAATTTGGCAAATAGGGCCCCCCCCTTTAATACGCTCCAATTAAAAAACGGGCGGGTGGGGTTGGGTTTATTTGCAACATTGCCCCTTTTTAAAATTTGCATAAAAGCCCTTTTACGCCCCGCAGGCTTTTTAAATTTACATAGCG] [+] EMBL CA758446 [AGCTCGCCACCAGCCCCGTCGCCGGCAGGCTTGGCCCCGTCTCCCACCGCCGAGGTGACCCCTCCCCCCAGCGCCGCCGCCGTCGTCTACCCCGACGCCGGGTGGGTCGACGCCGCCGCCGTGGCAGCCGTCGACGAGTTCTACTGAGATCGAGGCTGATGAGATTCGTCGACCACCTCATTAATTTATTACCCGTCCATTAAAGGGACTCACCATTCCTACTCCTCCTCTCCTGATCTCCTACTTTTCCTTCTTCATCTGCGGTGGCGGTGTCGAGCTGTTTATTATATACCTCTCTCTATCTATGTTTTGTTTCATTGTATGGGGCATTTTTATTTCCATTCATGCATTTGAGACACCATGTGTGTGGGCGTTTGGCGTGGACAGATTGGTTGGATGGGCTGGTGTTGCGCTGCTTCTACATTGTACTATACATCTTCCGGTGGTTAAAACTCGAAGAGGATGGGGTGTCAAGAGATATCCTATTTGGTGGTTATATAATAATTCTTGAGGGGGGGGCCCGGTTCCCAAATTTGCCCTTAAAAGAAGCCGTATTACCCCTCCCTTGATTGGCCCCTGGTTTTAACAACCTCCTTAATGGGAAAAACCCTTGAGGGTTACCAAACTTTATTCGCTTTTGAAAAAACATACCCCCTTTGGAAAAACCTGGGTTATTTAATAAAAAAGGGCCCTCTCTGTATGGGGCTTTTCCAAATATTTGGGTATGTCTTAATTTGGCAAATAGGGCCCCCCCCTTTAATACGCTCCAATTAAAAAACGGGCGGGTGGGGTTGGGTTTATTTGCAACATTGCCCCTTTTTAAAATTTGCATAAAAGCCCTTTTACGCCCCGCAGGCTTTTTAAATTTACATAGCG] consensusID : consensus_14118#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 438 fasta sequence [GTTAACCCCCCCTNAAGCTCCTTGAACGGNTTGTCTGCCTAAAAAAACCTCTTGAACTCTGGTAAGANA-CTCCCCTGAAGATGGTTTTTTCCTTGTCCAAAGACCTAAACTCCCTCCTCACCGTGACTGAGCTTCAGTCCTAAAAGACTCCAAGCTAACAGTCAGTGATCTGATCCCTTCTTTCAAAGCCAGCGAATCTGACTCATGGTTCTTCAACTTTGCTTCAGTAGCCTCAAGCCTTGAGATCAAATTTGTGGCATGAATTTCGGTTTGGTTAATTTTTGTGTTTAATCTTGCGATCTCCTCTTCCTTCTCAGACAGTTGGCTAGCAAGTTCTGCCCTTAAAGCGTCTTCCCTTTCTTGCACTTTCTTATTAGTGCGTTCTTGTGCTAGGGTTTGGGAGGAGAGTGTGTGCTTGGGGAGAAGGTGGCTACTAGC] [-] EMBL OSS4244A [GTTAACCCCCCCTNAAGCTCCTTGAACGGNTTGTCTGCCTAAAAAAACCTCTTGAACTCTGGTAAGANA CTCCCCTGAAGATGGTTTTTTCCTTGTCCAAAGACCTAAACTCCCTCCTCACCGTGACTGAGCTTCAGTCCTAAAAGACTCCAAGCTAACAGTCAGTGATCTGATCCCTTCTTTCAAAGCCAGCGAATCTGACTCATGGTTCTTCAACTTTGCTTCAGTAGCCTCAAGCCTTGAGATCAAATTTGTGGCATGAATTTCGGTTTGGTTAATTTTTGTGTTTAATCTTGCGATCTCCTCTTCCTTCTCAGACAGTTGGCTAGCAAGTTCTGCCCTTAAAGCGTCTTCCCTTTCTTGCACTTTCTTATTAGTGCGTTCTTGTGCTAGGGTTTGGGAGGAGAGTGTGTGCTTGGGGAGAAGGTGGCTACTAGC] [-] EMBL OSS2641A [ cACTCT GTTAGATACCTCTCCTGAAGATGGTTTTTTCC TGTTCCAAGATCTTCACTTCCTTCTCA CGTGACTGAGCTTCAGTTCTAAAAGACTCCAAGCTAACAGTCAGTGATCTGATCTCTTCTTTCAAAGCCAGCGAATCTGACTCATGGTTCTTCAACTTTGCTTCAGTAGCCTCAAGCCTTGAGATCAAATTTGTGGCATGAATTTCGGTTTGGTTAATTTTTGTGTTTAATCTTGCGATCTCCTCTTCCTTCTCAGACAGTTGGCTAGCAAGTTCTGCCCTTAAAGCGTCTTCCCTTTCTTGCACTTTCTTATTAGTGCGTTCTTGTGCTAGGGTTTGGGAGGAGAGTGTGTGCTTGGGGAGAAGGTGGCTACTAGC] consensusID : consensus_14118#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 323 fasta sequence [TCAAGCTAGTAGCCACCTTCTCCCCAAGCACACACTCTCCTCCCAAACCCTAGCACCAGCTAGCTCTCTCACTCTACTCCAATGGCGCGCTTCCAGATCGTGGCCTTGGCCATGGCGATGCTCTTCGCCGCCGCATCAGCTCAGGCCCCGGCGGCCACCCCGACGCCCGCTCCCAAGGCGTCCCCTCCTCCGGCGACGCCGCCGCCGACGCCTGCGCCGGTGTCAGCGCCCCCGGCTCAGGCCCCGGCCACTCCTCCCCCGGCTCCGGCTCCCGCCCCCAAGGCCTCAGCTCCGGCTCCCGCCCCCAAGGCCTCGGCTCCGGC] [+] EMBL AU173090 [TCAAGCTAGTAGCCACCTTCTCCCCAAGCACACACTCTCCTCCCAAACCCTAGCACCAGCTAGCTCTCTCACTCTACTCCAATGGCGCGCTTCCAGATCGTGGCCTTGGCCATGGCGATGCTCTTCGCCGCCGCATCAGCTCAGGCCCCGGCGGCCACCCCGACGCCCGCTCCCAAGGCGTCCCCTCCTCCGGCGACGCCGCCGCCGACGCCTGCGCCGGTGTCAGCGCCCCCGGCTCAGGCCCCGGCCACTCCTCCCCCGGCTCCGGCTCCCGCCCCCAAGGCCTCAGCTCCGGCTCCCGCCCCCAAGGCCTCGGCTCCGGC] [+] EMBL AU164290 [ AGCTAGTAGCCACCTTCTCCCCAAGCACACACTCTCCTCCCAAACCCTAGCACCAGCTAGCTCTCTCACTCTACTCCAATGGCGCGCTTCCAGATCGTGGCCTTGGCCATGGCGATGCTCTTCGCCGCCGCATCAGCTCAGGCCCCGGCGGCCACCCCGACGCCCGCTCCCAAGGCGTCCCCTCCTCCGGCGACGCCGCCGCCGACGCCTGCGCCGGTGTCAGCGCCCCCGGCTCAGGCCCCGGCCACTCCTCCCCCGGCTCCGGCTCCCGCCCCCAAGGCCTCAGCTCCGGCTCCCGCCCCCAAGGCCTCGGCTCCGGC] [+] EMBL C74136 [ AGCTAGTAGCCACCTTCTCCCCAAGCACACACTCTCCTCCCAAACCCTAGCACCAGCTAGCTCTCTCACTCTACTCCAATGGCGCGCTTCCAGATCGTGGCCTTGGCCATGGCGATGCTCTTCGCCGCCGCATCAGCTCAGGCCCCGGCGGCCACNCCGACGCCCGCTCCCAAGGCGTCCCCTCCTCCGGCGACG CGCNGCCGACGCCTGCGCCGGTGTCAGCGCCCCCGGCTCAGGCC ] [+] EMBL AU064360 [ GCTAGTAGCCACCTTCTCCCCAAGCACACACTCTCCTCCCAAACCCTAGCACCAGCTAGCTCTCTCACTCTACTCCAATGGCGCGCTTCCAGATCGTGGCCTTGGCCATGGCGATGCTCTTCGCCGCCGCATCAGCTCAGGCCCCGGCGGCCACCCCGACGNCCGNTCCCAAGGCGTCCCCTGCTCCGGCGACG CGTNGACGACGNCTGCGCCGGTGTCAGCGGCCCCGGCTCAGGTCCCGG ] [+] EMBL AU064359 [ GCTAGTAGCCACCTTCTCCCCAAGCACACACTCTCCTCCCAAACCCTAGCACCAGCTAGCTCTCTCACTCTACTCCAATGGCGCGCTTCCAGATCGTGGCCTTGGCCATGGCGATGCTCTTCGCCGCCGCATCAGCTCAGGCCCCGGCGGCCACCCCGACGCCCGCTCCCAAGGCGTCCCCTNCTCCGGCGACG CGNCGCCGACGNCTGCGCCGGTGTCAGCGCCCCCGGCTCAGGC ] [+] EMBL AU164482 [ AGTAGCCACCTTCTCCCCAAGCACACACTCTCCTCCCAAACCCTAGCACCAGCTAGCTCTCTCACTCTACTCCAATGGCGCGCTTCCAGATCGTGGCCTTGGCCATGGCGATGCTCTTCGCCGCCGCATCAGCTCAGGCCCCGGCGGCCACCCCGACGCCCGCTCCCAAGGCGTCCCCTCCTCCGGCGACGCCGCCGCCGACGCCTGCGCCGGTGTCAGCGCCCCCGGCTCAGGCCCCGGCCACTCCTCCCCCGGCTCCGGCTCCCGCCCCCAAGGCCTCAGCTCCGGCTCCCGCCCCCAAGGCCTCGGCTCCGGC] consensusID : consensus_14118#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 306 fasta sequence [GTACACCACCTCAAGCTAGTAGCCACCTTCTCCCCAAGCACACACTCTCCTCCCCCCAGCGCCGCCGCCGGCGTCTCCCCCGCCGCCGCGTGGGTCGCCGCCGCCGCCGTGGCCGCCGCCGCCGCGTTCTACTGAGATCGAGGCTGATGAGATCCGCCGACCACCTCATTAATTTATTACCCGTCCATCAGAGGGACCCACCATTCCTCCTCCTCCTCTCCTGATCTCCTCCTTTTCCTTCTTCATCTGTGGTGGTGGTGTTGAGCTGTTTATTTTATTTCTCTCTCTATCTTTTTTTTCTTCCAT] [+] EMBL AK058776 [GTACACCACCTCAAGCTAGTAGCCACCTTCTCCCCAAGCACACACTCTCCTCCCCCCAGCGCCGCCGCCGGCGTCTCCCCCGCCGCCGCGTGGGTCGCCGCCGCCGCCGTGGCCGCCGCCGCCGCGTTCTACTGAGATCGAGGCTGATGAGATCCGCCGACCACCTCATTAATTTATTACCCGTCCATCAGAGGGACCCACCATTCCTCCTCCTCCTCTCCTGATCTCCTCCTTTTCCTTCTTCATCTGTGGTGGTGGTGTTGAGCTGTTTATTTTATTTCTCTCTCTATCTTTTTTTTCTTCCAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14118#1 ------------------------------------------------------------ consensus_14118#4 ------------------------------------------------------------ consensus_14118#0 TTTTTTTTTTTGGAGAAATTAACCTTGATCTCTGTTTCGTAGTCCCCAACATATAGGATT 60 consensus_14118#2 ------------------------------------------------------------ consensus_14118#3 ------------------------------------------------------------ consensus_14118#1 ------------------------------------------------------------ consensus_14118#4 ------------------------------------------------------------ consensus_14118#0 ATTTCGTTAGTACAAACACGGAAGCCAGATATAATGGAGGGTTTGCAAACCAAATTTCTA 120 consensus_14118#2 ------------------------------------------------------------ consensus_14118#3 ------------------------------------------------------------ consensus_14118#1 ------------------------------------------------------------ consensus_14118#4 ------------------------------------------------------------ consensus_14118#0 CGCCCTTCGTCCCAAAATAAGTTGAACTACACGCTGAGTTTATTTTGAGACAGAGTGAGT 180 consensus_14118#2 ------------------------------------------------------------ consensus_14118#3 ------------------------------------------------------------ consensus_14118#1 ------------------------------------------------------------ consensus_14118#4 ------------------------------------------------------------ consensus_14118#0 AATAACTAAACACAGCCACACAGGTACTACAAACACTTGCCAATGATGCATGCAAAATAA 240 consensus_14118#2 ------------------------------------------------------------ consensus_14118#3 ------------------------------------------------------------ consensus_14118#1 ------------------------------------------------------------ consensus_14118#4 ------------------------------------------------------------ consensus_14118#0 ACTGCACCAAGTTAACAATAACACAAACTGGAGTTTCAGGCTAAGTTACATTAGTTATTT 300 consensus_14118#2 ------------------------------------------------------------ consensus_14118#3 ------------------------------------------------------------ consensus_14118#1 ------------------------------------------------------------ consensus_14118#4 ------------------------------------------------------------ consensus_14118#0 CGCGCTCTCACCTCAACCGTGACAACAACGTTCATCGCAACAGGGAAAATCTAGCACGCA 360 consensus_14118#2 ------------------------------------------------------------ consensus_14118#3 ------------------------------------------------------------ consensus_14118#1 ------------------------------------------------------------ consensus_14118#4 ------------------------------------------------------------ consensus_14118#0 TAAATAGAAAACCGCTACTTGCCAACTACGTGCTTCTCATATAAGGCGACGATGTCCTTC 420 consensus_14118#2 ------------------------------------------------------------ consensus_14118#3 ------------------------------------------------------------ consensus_14118#1 ------------------------------------------------------------ consensus_14118#4 ------------------------------------------------------------ consensus_14118#0 TTGTTGGGATTCTTCAGTTGCAGGAGTTGAGCACCAAACCCATGCTTAGTGAGCTCCTGC 480 consensus_14118#2 ------------------------------------------------------------ consensus_14118#3 ------------------------------------------------------------ consensus_14118#1 ------------------------------------------------------------ consensus_14118#4 ------------------------------------------------------------ consensus_14118#0 TTCAGCTTCAGCACAGTGAACTTGATGTAGTCTTCAGTCTCCGTCTCCTGCGCTTGCTGG 540 consensus_14118#2 ------------------------------------------------------------ consensus_14118#3 ------------------------------------------------------------ consensus_14118#1 ------------------------------------------------------------ consensus_14118#4 ------------------------------------------------------------ consensus_14118#0 CTCCCGTTGTTAGTGTCTTCTCCTACAAATACAGAGCCACCGTCCTCGGTGTGATTGCTC 600 consensus_14118#2 ------------------------------------------------------------ consensus_14118#3 ------------------------------------------------------------ consensus_14118#1 ------------------------------------------------------------ consensus_14118#4 ------------------------------------------------------------ consensus_14118#0 TTAAACGGGCTCGTCGTGCTTTTTGATCGTTTCCTTCGCCTGCCAGTGTTGTCATCGTCG 660 consensus_14118#2 ------------------------------------------------------------ consensus_14118#3 ------------------------------------------------------------ consensus_14118#1 ------------------------------------------------------------ consensus_14118#4 ------------------------------------------------------------ consensus_14118#0 ATATCCATATCATGGACAGACTCAGTAGCTTCACCCCTCAGGCGCCTTGCATGTGAGGCC 720 consensus_14118#2 ------------------------------------------------------------ consensus_14118#3 ------------------------------------------------------------ consensus_14118#1 ------------------------------------------------------------ consensus_14118#4 ------------------------------------------------------------ consensus_14118#0 TTAAGCTTGCTGTCCAGTGCGGTTTCATTGAACCGAACAGATGTCAGCTCTTGTTGGAGC 780 consensus_14118#2 ------------------------------------------------------------ consensus_14118#3 ------------------------------------------------------------ consensus_14118#1 ------------------------------------------------------------ consensus_14118#4 ------------------------------------------------------------ consensus_14118#0 ATATCTAACTTGCTTTGAGTTGCCTGCAACTGCAGTGACAGAGCCTCAGCTCTCCTATTG 840 consensus_14118#2 ------------------------------------------------------------ consensus_14118#3 ------------------------------------------------------------ consensus_14118#1 ------------------------------------------------------------ consensus_14118#4 ------------------------------------------------------------ consensus_14118#0 GCCTCAGCGCAGGCTTCTCGTTCTGTCTCCAGTAGACTCTCAAGAACTTGAACTGTACTG 900 consensus_14118#2 ------------------------------------------------------------ consensus_14118#3 ------------------------------------------------------------ consensus_14118#1 ------------------------------------------------------------ consensus_14118#4 ------------------------------------------------------------ consensus_14118#0 GACCTTTGCTGGTTGCTCCGTTGCATCATCTCATCAATTTCCTTTTCCCGCTCGTCAACC 960 consensus_14118#2 ------------------------------------------------------------ consensus_14118#3 ------------------------------------------------------------ consensus_14118#1 ------------------------------------------------------------ consensus_14118#4 ------------------------------------------------------------ consensus_14118#0 CTTTGTTCAAGCGATGAAACCTTACATACAGCATCCTCGTCAGACTGACCAACTCGCTCA 1020 consensus_14118#2 ------------------------------------------------------------ consensus_14118#3 ------------------------------------------------------------ consensus_14118#1 ------------------------------------------------------------ consensus_14118#4 ------------------------------------------------------------ consensus_14118#0 ATTTCTTCCAGCATCTTATTCTTCTCTCTCTCCAGACCTTCAACCTGTCTCTCCATTCTT 1080 consensus_14118#2 ------------------------------------------------------------ consensus_14118#3 ------------------------------------------------------------ consensus_14118#1 ------------------------------------------------------------ consensus_14118#4 ------------------------------------------------------------ consensus_14118#0 TCTATTAACGCAAGTCTCTCCATTGCTAGCCTCTGCGCTTCACCCTTATCCTTCTGGGAA 1140 consensus_14118#2 ------------------------------------------------------------ consensus_14118#3 ------------------------------------------------------------ consensus_14118#1 ------------------------------------AGCTCGCCACCAGCCCCGTCGCCG 24 consensus_14118#4 ----------------------------------------------GTACACCACCTCAA 14 consensus_14118#0 GCAACAGCTTCTGCACGAGCTACGTCAGCCAATTCCGTTGCTCGTTTAGCCTCCCTTTCA 1200 consensus_14118#2 --------------------------------------------GTTAACCCCCCCTNAA 16 consensus_14118#3 --------------------------------------------------------TCAA 4 consensus_14118#1 GCAGGCTTGGCCCCGTCTCCCACCGCCGAGGTGACCC----CTCCCCCCAGCGCCGCCGC 80 consensus_14118#4 GCTAG--TAGCCACCTTCTCCCCAAGCACACACTCTC----CTCCCCCCAGCGCCGCCGC 68 consensus_14118#0 GCTTCCTTGCACCGGCTGTCTGCCTCATCAAACCTCTTGCACTCTGTTAGATACTTCTCC 1260 consensus_14118#2 GCT-CCTTGAACGGNTTGTCTGCCTAAAAAAACCTCTTGAACTCTGGTAAGANACTCCCC 75 consensus_14118#3 GCTAG--TAGCCACCTTCTCCCCAAGCACACACTCTC------CTCCCAAACCCTAGCAC 56 ** * * * * * * consensus_14118#1 CG----TCGTCTACCCCGACGCCGGGTGGGTCGACGCCGCCGCCGTGGCAGCCGTCGACG 136 consensus_14118#4 CG----GCGTCTCCCCCGCCGCCGCGTGGGTCGCCGCCGCCGCCGTGGCCGCCGCCGCCG 124 consensus_14118#0 TGAAGATGGTTTTTTTCTTGTTCCAAGATCTTCACTTCCTTCTCAC-GTGACTGAGCTTC 1319 consensus_14118#2 TGAAGATGGTTTTTTCCTTGTCCAAAGACCTAAACTCCCTCCTCACCGTGACTGAGCTTC 135 consensus_14118#3 CA------GCTAGCTCTCTCAC--------TCTACTCCAATGGCGC-GCTTCCAGATCGT 101 * * * * * * * consensus_14118#1 AGTTCTACTGAGATCGAGGCTGATGAGATTCGTCGACCACCTCATTAATTTATTACCCGT 196 consensus_14118#4 CGTTCTACTGAGATCGAGGCTGATGAGATCCGCCGACCACCTCATTAATTTATTACCCGT 184 consensus_14118#0 AGTTCTAAAAGACTCCAAGCTAACA------GTCAGTGATCTGATCTCTTCTTTCAAAGC 1373 consensus_14118#2 AGTCCTAAAAGACTCCAAGCTAACA------GTCAGTGATCTGATCCCTTCTTTCAAAGC 189 consensus_14118#3 GGCCTTGGCCATGGCGATGCTC----------TTCGCCGCCGCATCAGCTCAGGCCCCGG 151 * * * * *** * ** * * consensus_14118#1 CCATTAAAGGGACTCACCATTCCTACTCCTCCTCTCCTGATCTCCTACTTTTCCTTCTTC 256 consensus_14118#4 CCATCAGAGGGACCCACCATTCCTCCTCCTCCTCTCCTGATCTCCTCCTTTTCCTTCTTC 244 consensus_14118#0 CAGCGAATCTGACTCATGGTTCTTCAACTTTGCTTCAGTAGCCTCAAGCCTTGAGATCAA 1433 consensus_14118#2 CAGCGAATCTGACTCATGGTTCTTCAACTTTGCTTCAGTAGCCTCAAGCCTTGAGATCAA 249 consensus_14118#3 CGGCCACCCCGACGCCCGCTCCCAAGGCGTCCCCTCCT--CCGGCGACGCCGCCGCCGAC 209 * * *** * * * * * ** * * consensus_14118#1 ATCTGCGGTGGCGGTGTCGAGCT--GTTTATTATATA-CCTCTC-TCTATCTATGTTTTG 312 consensus_14118#4 ATCTGTGGTGGTGGTGTTGAGCT--GTTTATTTTATT-TCTCTC-TCTATCTTTTTTTTC 300 consensus_14118#0 ATTTGTGGCATGAATTTCGGTTT--GGTTAATTTTTG-TGTTTAATCTTGCGATCTCCTC 1490 consensus_14118#2 ATTTGTGGCATGAATTTCGGTTT--GGTTAATTTTTG-TGTTTAATCTTGCGATCTCCTC 306 consensus_14118#3 GCCTGCGCCGGTGTCAGCGCCCCCGGCTCAGGCCCCGGCCACTCCTCCCCCGGCTCCGGC 269 ** * * * * * * ** * consensus_14118#1 TTTCATTGTATGGGGCATTTTTATTTCCATTCATGCATTTGAGACACCATG--TGTGTGG 370 consensus_14118#4 TTCCAT------------------------------------------------------ 306 consensus_14118#0 TTCCTTCTCA---GACAGTTGGCTAGCAAGTTCTGCCCTTAAAGCGTCTTCCCTTTCTTG 1547 consensus_14118#2 TTCCTTCTCA---GACAGTTGGCTAGCAAGTTCTGCCCTTAAAGCGTCTTCCCTTTCTTG 363 consensus_14118#3 TCCCGCCCCC---AAGGCCTCAGCTCCGGCTCCCGCCCCCAAGGCCTCGGCTCCGGC--- 323 * * consensus_14118#1 GCGTTTGGCGTGGACAGATTGGTTGGATGGGCTGGTGTTGCGCTGCTTCTACATTGTACT 430 consensus_14118#4 ------------------------------------------------------------ consensus_14118#0 CACTTTCTTATTAGTGCGTTCTTGTGCTACAGCTGCTCTTTGCAGAGCTGTTTTTGCCTC 1607 consensus_14118#2 CACTTTCTTATTAGTGCGTTCTTGTGCTAGGGTT-----TGGGAGGAGAGTGTGTGCTTG 418 consensus_14118#3 ------------------------------------------------------------ consensus_14118#1 ATACATCTTCCGGTGGTTAAAACTCGAAGAGGATGGGGTGTCAAGAGATATCCTATTTGG 490 consensus_14118#4 ------------------------------------------------------------ consensus_14118#0 ACTTACAGCAACTTCATATTTCCGTTTCCACTCCGATGCCTCTTCTTGAGCAGACTCAGC 1667 consensus_14118#2 GGGAGAAGGTGGCTACTAGC---------------------------------------- 438 consensus_14118#3 ------------------------------------------------------------ consensus_14118#1 TGGTTATATAATAATTCTTGAGGGGGGGGCCCGGTTCCCAAATTTGCCCTTAAAAGAAGC 550 consensus_14118#4 ------------------------------------------------------------ consensus_14118#0 CTGTTCTCGCACAGCAGATAATCTGCCCTCACTGATATTTACCCTGGATTCCAGAGAAGC 1727 consensus_14118#2 ------------------------------------------------------------ consensus_14118#3 ------------------------------------------------------------ consensus_14118#1 CGTATTACCCCTCCCTTGATTGGCCCCTGGTTTTAACAACCTCCTTAATGGGAAAAACCC 610 consensus_14118#4 ------------------------------------------------------------ consensus_14118#0 AATTTGAGACTTTAACT------------------------------------------- 1744 consensus_14118#2 ------------------------------------------------------------ consensus_14118#3 ------------------------------------------------------------ consensus_14118#1 TTGAGGGTTACCAAACTTTATTCGCTTTTGAAAAAACATACCCCCTTTGGAAAAACCTGG 670 consensus_14118#4 ------------------------------------------------------------ consensus_14118#0 ------------------------------------------------------------ consensus_14118#2 ------------------------------------------------------------ consensus_14118#3 ------------------------------------------------------------ consensus_14118#1 GTTATTTAATAAAAAAGGGCCCTCTCTGTATGGGGCTTTTCCAAATATTTGGGTATGTCT 730 consensus_14118#4 ------------------------------------------------------------ consensus_14118#0 ------------------------------------------------------------ consensus_14118#2 ------------------------------------------------------------ consensus_14118#3 ------------------------------------------------------------ consensus_14118#1 TAATTTGGCAAATAGGGCCCCCCCCTTTAATACGCTCCAATTAAAAAACGGGCGGGTGGG 790 consensus_14118#4 ------------------------------------------------------------ consensus_14118#0 ------------------------------------------------------------ consensus_14118#2 ------------------------------------------------------------ consensus_14118#3 ------------------------------------------------------------ consensus_14118#1 GTTGGGTTTATTTGCAACATTGCCCCTTTTTAAAATTTGCATAAAAGCCCTTTTACGCCC 850 consensus_14118#4 ------------------------------------------------------------ consensus_14118#0 ------------------------------------------------------------ consensus_14118#2 ------------------------------------------------------------ consensus_14118#3 ------------------------------------------------------------ consensus_14118#1 CGCAGGCTTTTTAAATTTACATAGCG 876 consensus_14118#4 -------------------------- consensus_14118#0 -------------------------- consensus_14118#2 -------------------------- consensus_14118#3 -------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||