These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14127#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 2127 fasta sequence [CATCTCGCCTCGAAGGAGGAGTAGGAGGAAGAGAGAAGCCGGCACAAGCGAGCCCAGCAAACGCACGGCACCACGGATCATTGGGATCAAAACACGAGAGCTTAATTGAGAAGCAGAGAAGGAGATCAAGAAAAGCAGAGCAAAGCCGCCGGCGAAGAGGGAGGAGGTGGCCGGTGGGATGGACGTGAAGCGGGCCCGGAGCCCGCGGGCTCCGGGC-GTCGACGCCGACGACGACAAGAAGCGGGCCGCCGAGTGGCGCGGCGCCGTCCGGCCGCACATGGTGCTGGTCGGCTTCCTCATCACCCTGCCCGTCCTGGTCTTCGTCTTCGGCGGCCGCTGGGGCTCCTTCCAAACCACCTCCGCCCCCAACGTCGGCGGCCGCCACGTCGTCCCCGGCGGCGTAACAACGACACAAAAAAATGAAGCCCCGAAAAACGTCTCTGTACCAGCCACTGCAACCAAATCTCTGCCCCAACCCCAGGACAAGCTTCTCGGAGGACTACTCTCTGCCGCATTCGAAGAATCCTCATGTCAGAGCAGATACAAATCATCTCTCTACCGGAAGAAGTCTCCGTTCCCTCTGTCCCCTTACCTGGTTCAGAAGCTGCGGAAGTACGAGGCCTACCACAAGAAGTGCGGCCCTGGCACGAAGCGCTACCGGAAGGCGATCGAGCAGCTCAAGGCGGGGCGCAACGCCGACAACGCCGAGTGCAAGTACGTGGTGTGGTTCCCCTGCAACGGCCTCGGCAACCGCATGCTCACCATCGCCTCCACCTTCCTGTACGCGCTCATCTCCAACCGCGTCCTCCTCATGCACGTCGCGGCGGAGCAGGAGGGCCTCTTCTGCGAGCCGTTCCCGGGGAGCTCGTGGGTGCTCCCGGGCGACTTCCCCCACAACAACCCGCAGGGCCTGCACATCGGCGCGCCGGAGAGCTACGTCAACATGCTCAAGAACAACGTCGTCCGCAACGACGACCCCGGCAGCGTGTCGGCGTCGTCGCTGCCGCCGTACGTGTACCTCCACGTCGAGCAGTTCCGGCTGAAGCTGTCCGACAACATCTTCTGCGACGAGGACCAGTTGATTCTCAACAAGTTCAACTGGATGATACTCAAATCTGACAGCTACTTCGCGCCGGCGCTGTTCATGACGCCGATGTACGAGAAGGAGCTGGAAAAGATGTTCCCGCAGAAGGAGTCAGTGTTCCATCATCTTGGGAGGTACCTGTTCCATCCGACGAACAAAGTATGGGGAATCGTGAGCAGGTACTACGAAGCGTACCTTGCCAGAGTCGACGAGAAAATCGGGTTCCAGATACGGATCTTCCCGGAGAAGCCGATAAAATTCGAGAACATGTATGATCAGCTGACGAGGTGCATCAGGGAGCAGCGGTTGTTGCCGGAGCTCGGCACGGCGGAGCCGGCGAACACGACTGCCGAAGCAGGGAAGGTGAAGGCCGTACTGATCGCTTCTCTGTACTCGGGATATTACGAGAAGATCCGTGGGATGTACTACGAGAATCCAACCAAGACTGGCGAGATCGTCGCGGTGTACCAGCCGAGCCACGAGGAGCAGCAGCAGTACACGTCCAACGAGCACAACCAGAAGGCGCTGGCCGAGATCTATCTGCTCAGCTACTGCGACAAGATCGCCATGAGCGCCTGGTCGACGTTCGGGTACGTGGCCTACAGCTTCGCCGGCGTCAAGCCGTGGATCCTGCTCCGGCCGGACTGGGACAAGGAGAGGTCGGAGGTGGCGTGCGTCAGGTCGACGTCGGTGGAGCCGTGCCTCCACTCGCCGCCGATCCTCTCGTGCAGGGCCAAGAAGGAGGTCGACGCGGCCACCGTCAAGCCGTACGTTCGGCACTGCGAGGATGTCGGGTTCGGTCTCAAGTTGTTCGATAGCTAATTTTTTGGAGAAGTGACTTCTTCGGTTTCACGTTCCGAATTGCGTTCGTTACGTCACGTCCTGTGGATTAACTAGGCCTTTTGGAGATTCGTTATATTCGTTTGGACTCGTATACACCTGAAAATGCACAAAATGTATTATGTAAAATGTATTATGTATCTGTATTCAAATTCGTTCTTCATAAAACAATTCGGATATATATATACACACAAAAAAAGAGA] [+] EMBL AK072854 [CATCTCGCCTCGAAGGAGGAGTAGGAGGAAGAGAGAAGCCGGCACAAGCGAGCCCAGCAAACGCACGGCACCACGGATCATTGGGATCAAAACACGAGAGCTTAATTGAGAAGCAGAGAAGGAGATCAAGAAAAGCAGAGCAAAGCCGCCGGCGAAGAGGGAGGAGGTGGCCGGTGGGATGGACGTGAAGCGGGCCCGGAGCCCGCGGGCTCCGGGC GTCGACGCCGACGACGACAAGAAGCGGGCCGCCGAGTGGCGCGGCGCCGTCCGGCCGCACATGGTGCTGGTCGGCTTCCTCATCACCCTGCCCGTCCTGGTCTTCGTCTTCGG GGCCGCTGGGGCTCCTTCCAAACCACCTCCGCCCCCAACGTCGGCGGCCGCCACGTCGTCCCCGGCGGCGTAACAACGACACAAAAAAATGAAGCCCCGAAAAACGTCTCTGTACCAGCCACTGCAACCAAATCTCTGCCCCAACCCCAGGACAAGCTTCTCGGAGGACTACTCTCTGCCGCATTCGAAGAATCCTCATGTCAGAGCAGATACAAATCATCTCTCTACCGGAAGAAGTCTCCGTTCCCTCTGTCCCCTTACCTGGTTCAGAAGCTGCGGAAGTACGAGGCCTACCACAAGAAGTGCGGCCCTGGCACGAAGCGCTACCGGAAGGCGATCGAGCAGCTCAAGGCGGGGCGCAACGCCGACAACGCCGAGTGCAAGTACGTGGTGTGGTTCCCCTGCAACGGCCTCGGCAACCGCATGCTCACCATCGCCTCCACCTTCCTGTACGCGCTCATCTCCAACCGCGTCCTCCTCATGCACGTCGCGGCGGAGCAGGAGGGCCTCTTCTGCGAGCCGTTCCCGGGGAGCTCGTGGGTGCTCCCGGGCGACTTCCCCCACAACAACCCGCAGGGCCTGCACATCGGCGCGCCGGAGAGCTACGTCAACATGCTCAAGAACAACGTCGTCCGCAACGACGACCCCGGCAGCGTGTCGGCGTCGTCGCTGCCGCCGTACGTGTACCTCCACGTCGAGCAGTTCCGGCTGAAGCTGTCCGACAACATCTTCTGCGACGAGGACCAGTTGATTCTCAACAAGTTCAACTGGATGATACTCAAATCTGACAGCTACTTCGCGCCGGCGCTGTTCATGACGCCGATGTACGAGAAGGAGCTGGAAAAGATGTTCCCGCAGAAGGAGTCAGTGTTCCATCATCTTGGGAGGTACCTGTTCCATCCGACGAACAAAGTATGGGGAATCGTGAGCAGGTACTACGAAGCGTACCTTGCCAGAGTCGACGAGAAAATCGGGTTCCAGATACGGATCTTCCCGGAGAAGCCGATAAAATTCGAGAACATGTATGATCAGCTGACGAGGTGCATCAGGGAGCAGCGGTTGTTGCCGGAGCTCGGCACGGCGGAGCCGGCGAACACGACTGCCGAAGCAGGGAAGGTGAAGGCCGTACTGATCGCTTCTCTGTACTCGGGATATTACGAGAAGATCCGTGGGATGTACTACGAGAATCCAACCAAGACTGGCGAGATCGTCGCGGTGTACCAGCCGAGCCACGAGGAGCAGCAGCAGTACACGTCCAACGAGCACAACCAGAAGGCGCTGGCCGAGATCTATCTGCTCAGCTACTGCGACAAGATCGCCATGAGCGCCTGGTCGACGTTCGGGTACGTGGCCTACAGCTTCGCCGGCGTCAAGCCGTGGATCCTGCTCCGGCCGGACTGGGACAAGGAGAGGTCGGAGGTGGCGTGCGTCAGGTCGACGTCGGTGGAGCCGTGCCTCCACTCGCCGCCGATCCTCTCGTGCAGGGCCAAGAAGGAGGTCGACGCGGCCACCGTCAAGCCGTACGTTCGGCACTGCGAGGATGTCGGGTTCGGTCTCAAGTTGTTCGATAGCTAATTTTTTGGAGAAGTGACTTCTTCGGTTTCACGTTCCGAATTGCGTTCGTTACGTCACGTCCTGTGGATTAACTAGGCCTTTTGGAGATTCGTTATATTCGTTTGGACTCGTATACACCTGAAAATGCACAAAATGTATTATGTAAAATGTATTATGTATCTGTATTCAAATTCGTTCTTCATAAAACAATTCGGATATATATATACACACACGCAAACAGA] [+] EMBL CB655511 [ ACGTGAAGCGGGCCCGGAGCCCGCGGGCTCCGGGC GTCGACGCCGACGACGACAAGAAGCGGGCCGCCGAGTGGCGCGGCGCCGTCCGGCCGCACATGGTGCTGGTCGGCTTCCTCATCACCCTGCCCGTCCTGGTCTTCGTCTTCGGCGGCCGCTGGGGCTCCTTCCAAACCACCTCCGCCCCCAACGTCGGCGGCCGCCACGTCGTCCCCGGCGGCGTAACAACGACACAAAAAAATGAAGCCCCGAAAAACGTCTCTGTACCAGCCACTGCAACCAAATCTCTGCCCCAACCCCAGGACAAGCTTCTCGGAGGACTACTCTCTGCCGCATTCGAAGAATCCTCATGTCAGAGCAGATACAAATCATCTCTCTACCGGAAGAAGTCTCCGTTCCCTCTGTCCCCTTACCTGGTTCAGAAGCTGCGGAAGTACGAGGCCTACCACAAGAAGTGCGGCCCTGGCACGAAGCGCTACCGGAAGGCGATCGAGCAGCTCAAGGCGGGGCGCAACGCCGACAACGCCGAGTGCAAGTACGTGGTGTGGTTCCCCTGCAACGGCCTCGGCAACCGCATGCTCACCATCGCCTCCACCTTCCTGTACGCGCTCATCTCCAACCGCGTCCTCCTCATGCACGTCGCGGCGGAGCAGGAGGGCCTCTTCTGCGAGCCGTTCCCGGGGAGCTCGTGGGTGCTCCCGGGCGACTTCCCCCACAACAACCCGCAGGGCCTGCACATCGGCGCGCCGGAGAGCTACGTCAACATGCTCAAGAATCACGTCGTC ] [+] EMBL CB652814 [ GGCTCCCGGCTGTCGACGCCGACGACGACAAGAAGCGGGCCGCCGAGTGGCGCGGCGCCGTCCGGCCGCACATGGTGCTGGTCGGCTTCCTCATCACCCTGCCCGTCCTGGTCTTCGTCTTCGGCGGCCGCTGGGGCTCCTTCCAAACCACCTCCGCCCCCAACGTCGGCGGCCGCCACGTCGTCCCCGGCGGCGTAACAACGACACAAAAAAATGAAGCCCCGAAAAACGTCTCTGTACCAGCCACTGCAACCAAATCTCTGCCCCAACCCCAGGACAAGCTTCTCGGAGGACTACTCTCTGCCGCATTCGAAGAATCCTCATGTCAGAGCAGATACAAATCATCTCTCTACCGGAAGAAGTCTCCGTTCCCTCTGTCCCCTTACCTGGTTCAGAAGCTGCGGAAGTACGAGGCCTACCACAAGAAGTGCGGCCCTGGCACGAAGCGCTACCGGAAGGCGATCGAGCAGCTCAAGGCGGGGCGCAACGCCGACAACGCCGAGTGCAAGTACGTGGTGTGGTTCCCCTGCAACGGCCTCGGCAACCGCATGCTCACCATCGCCTCCACCTTCCTGTACGCGCTCATCTCCAACCGCGTCCTCCTCATGCACGTCGCGGCGGAGCAGGAGGGCCTCTTCTGCGAGCCGTTCCCGGGGAGCTCGTGGGTGCTCCCGGGCGACTTCCCCCACAACAACCCGCAGGGCCTGCACATCGGCGCGCCGGAGAGCTACGTCAACATGCTCAAGAACAACGTCGTCCGCAACGACGACCCCGGCAGCGTGTCGGCGTCGTCGCTGCCGCCGTA ] [+] EMBL CB652848 [ GCTCCTGGC GTCGACGCCGACGACGACAAGAAGCGGGCCGCCGAGTGGCGCGGCGCCGTCCGGCCGCACATGGTGCTGGTCGGCTTCCTCATCACCCTGCCCGTCCTGGTCTTCGTCTTCGGCGGCCGCTGGGGCTCCTTCCAAACCACCTCCGCCCCCAACGTCGGCGGCCGCCACGTCGTCCCCGGCGGCGTAACAACGACACAAAAAAATGAAGCCCCGAAAAACGTCTCTGTACCAGCCACTGCAACCAAATCTCTGCCCCAACCCCAGGACAAGCTTCTCGGAGGACTACTCTCTGCCGCATTCGAAGAATCCTCATGTCAGAGCAGATACAAATCATCTCTCTACCGGAAGAAGTCTCCGTTCCCTCTGTCCCCTTACCTGGTTCAGAAGCTGCGGAAGTACGAGGCCTACCACAAGAAGTGCGGCCCTGGCACGAAGCGCTACCGGAAGGCGATCGAGCAGCTCAAGGCGGGGCGCAACGCCGACAACGCCGAGTGCAAGTACGTGGTGTGGTTCCCCTGCAACGGCCTCGGCAACCGCATGCTCACCATCGCCTCCACCTTCCTGTACGCGCTCATCTCCAACCGCGTCCTCCTCATGCACGTCGCGGCGGAGCAGGAGGGCCTCTTCTGCGAGCCGTTCCCGGGGAGCTCGTGGGTGCTCCCGGGCGACTTCCCCCACAACAACCCGCAGGGCCTGCACA ] [+] EMBL CB652906 [ ACAAGAAGCGGGCCGCCGAGTGGCGCGGCGCCATCCGGCCGCACATGGTGCTGGCCGGCTTCCTCATCACCCTGCCCGTCCTGGACTTCGTCTTCGGCGGCCGCTGGGGCTCCTTCCAAACCACCTCCGCCCCCAACGTCGGCGGCCGCCACGTCGTCCCCGGCGGCGTAACAACGACACAAAAAAATGAAGCCCCGAAAAACGTCTCTGTACCAGCCACTGCAACCAAATCTCTGCCCCAACCCCAGGACAAGCTTCTCGGAGGACTACTCTCTGCCGCATTCGAAGAATCCTCATGTCAGAGCAGATACAAATCCTCTCTCTACCGGAAGAAGTCTCCGTTCCCTCTGTCCCCTTACCTGGATCAGAAGCTGCGGAAGTACGAGGCCTACCACAAGAAGTGCGGCCCTGGCACGAAACGCTACCGGAAGGCGATCGAGCAGCTCAAGGGGGGGCGCAACG ] [-] EMBL CB652849 [ ATACGGATCTCCCCGGAGAAGCCGATAAAATTCGAGAACATGTATGATCAGCTGACGAGGTGCATCAGGGAGCAGCGGTTGTTGCCGGAGCTCGGCACGGCGGAGCCGGCGAACACGACTGCCGAAGCAGGGAAGGTGAAGGCCGTACTGATCGCTTCTCTGTACTCGGGATATTACGAGAAGATCCGTGGGATGTACTACGAGAATCCAACCAAGACTGGCGAGATCGTCGCGGTGTACCAGCCGAGCCACGAGGAGCAGCAGCAGTACACGTCCAACGAGCACAACCAGAAGGCGCTGGCCGAGATCTATCTGCTCAGCTACTGCGACAAGATCGCCATGAGCGCCTGGTCGACGTTCGGGTACGTGGCCTACAGCTTCGCCGGCGTCAAGCCGTGGATCCTGCTCCGGCCGGACTGGGACAAGGAGAGGTCGGAGGTGGCGTGCGTCAGGTCGACGTCGGTGGAGCCGTGCCTCCACTCGCCGCCGATCCTCTCGTGCAGGGCCAAGAAGGAGGTCGACGCGGCCACCGTCAAGCCGTACGTTCGGCACTGCGAGGATGTCGGGTTCGGTCTCAAGTTGTTCGATAGCTAATTTTTTGGAGAAGTGACTTCTTCGGTTTCACGTTCCGAATTGCGTTCGTTACGTCACGTCCTGTGGATTAACTAGGCCTTTTGGAGATTCGTTATATTCGTTTGGACTCGTATACACCTGAAAATGCACAAAATGTATTATGTTAAAGGTATTATGTATCTGTATTCA ] [-] EMBL CB652815 [ GGATCTTCCCGGAGAAGCCGATAAAATTCGAGAACATGTATGATCAGCTGACGAGGTGCATCAGGGAGCAGCGGTTGTTGCCGGAGCTCGGCACGGCGGAGCCGGCGAACACGACTGCCGAAGCAGGGAAGGTGAAGGCCGTACTGATCGCTTCTCTGTACTCGGGATATTACGAGAAGATCCGTGGGATGTACTACGAGAATCCAACCAAGACTGGCGAGATCGTCGCGGTGTACCAGCCGAGCCACGAGGAGCAGCAGCAGTACACGTCCAACGAGCACAACCAGAAGGCGCTGGCCGAGATCTATCTGCTCAGCTACTGCGACAAGATCGCCATGAGCGCCTGGTCGACGTTCGGGTACGTGGCCTACAGCTTCGCCGGCGTCAAGCCGTGGATCCTGCTCCGGCCGGACTGGGACAAGGAGAGGTCGGAGGTGGCGTGCGTCAGGTCGACGTCGGTGGAGCCGTGCCTCCACTCGCCGCCGATCCTCTCGTGCAGGGCCAAGAAGGAGGTCGACGCGGCCACCGTCAAGCCGTACGTTCGGCACTGCGAGGATGTCGGGTTCGGTCTCAAGTTGTTCGATAGCTAATTTTTTGGAGAAGTGACTTCTTCGGTTTCACGTTCCGAATTGCGTTCGTTACGTCACGTCCTGTGGATTAACTAGGCCTTTTGGAGATTCGTTATATTCGTTTGGACTCGTATACACCTGAAAATGCACAAAATGTATTATGTAAAATGTATTATGTATCTGTATTCAAATTCGTTCTTCA ] [-] EMBL CB641473 [ TTCGAGAACATGTATGATCAGCTGACGAGGTGCATCAGGGAGCAGCGGTTGTTGCCGGAGCTCGGCACGGCGGAGCCGGCGAACACGACTGCCGAAGCAGGGAAGGTGAAGGCCGTACTGATCGCTTCTCTGTACTCGGGATATTACGAGAAGATCCGTGGGATGTACTACGAGAATCCAACCAAGACTGGCGAGATCGTCGCGGTGTACCAGCCGAGCCACGAGGAGCAGCAGCAGTACACGTCCAACGAGCACAACCAGAAGGCGCTGGCCGAGATCTATCTGCTCAGCTACTGCGACAAGATCGCCATGAGCGCCTGGTCGACGTTCGGGTACGTGGCCTACAGCTTCGCCGGCGTCAAGCCGTGGATCCTGCTCCGGCCGGACTGGGACAAGGAGAGGTCGGAGGTGGCGTGCGTCAGGTCGACGTCGGTGGAGCCGTGCCTCCACTCGCCGCCGATCCTTTCGTGCAGGGCCAAGAAGGAGGTCGACGCGGCCACCGTCAAGCCGTACGTTCGGCACTGCGAGGATGTCGGGTTCGGTCTCAAGTTGTTCGATAGCTAATTTTTTGGAGAAGTGACTTCTTCGGTTTCACGTTCCGAATTGCGTTCGTTACGTCACGTCCTGTGGATTAACTAGGCCTTTTGGAGATTCGTTATATTCGTTTGGACTCGTATACCCCTGAAAATGCACAAAATGTATTATGTAAAATGTATTATGTATCTGTATTCAAATTCGTTCTTCATAAAACAATTCGGATATATATATCCACAAAAAAAAAG ] [-] EMBL CB652907 [ TTCGAGAACATGTATGATCAGCTGACGAGGTGCATCAGGGAGCAGCGGTTGTTGCCGGAGCTCGGCACGGCGGAGCCGGCGAACACGACTGCCGAAGCAGGGAAGGTGAAGGCCGTACTGATCGCTTCTCTGTACTCGGGATATTACGAGAAGATCCGTGGGATGTACTACGAGAATCCAACCAAGACTGGCGAGATCGTCGCGGTGTACCAGCCGAGCCACGAGGAGCAGCAGCAGTACACGTCCAACGAGCACAACCAGAAGGCGCTGGCCGAGATCTATCTGCTCAGCTACTGCGACAAGATCGCCATGAGCGCCTGGTCGACGTTCGGGTACGTGGCCTACAGCTTCGCCGGCGTCAAGCCGTGGATCCTGCTCCGGCCGGACTGGGACAAGGAGAGGTCGGAGGTGGCGTGCGTCAGGTCGACGTCGGTGGAGCCGTGCCTCCACTCGCCGCCGATCCTCTCGTGCAGGGCCAAGAAGGAGGTCGACGCGGCCACCGTCAAGCCGTACGTTCGGCACTGCGAGGATGTCGGGTTCGGTCTCAAGTTGTTCGATAGCTAATTTTTTGGAGAAGTGACTTCTTCGGTTTCACGTTCCGAATTGCGTTCGTTACGTCACGTCCTGTGGATTAACTAGGCCTTTTGGAGATTCGTTATATTCGTTTGGACTCGTATACACCTGAAAATGCc ] [-] EMBL CB655512 [ AGAACATGTATGATCAGCTGACGAGGTGCATCAGGGAGCAGCGGTTGTTGCCGGAGCTCGGCACGGCGGAGCCGGCGAACACGACTGCCGAAGCAGGGAAGGTGAAGGCCGTACTGATCGCTTCTCTGTACTCGGGATATTACGAGAAGATCCGTGGGATGTACTACGAGAATCCAACCAAGACTGGCGAGATCGTCGCGGTGTACCAGCCGAGCCACGAGGAGCAGCAGCAGTACACGTCCAACGAGCACAACCAGAAGGCGCTGGCCGAGATCTATCTGCTCAGCTACTGCGACAAGATCGCCATGAGCGCTTGGTCGACGTTCGGGTACGTGGCCTACAGCTTCGCCGGCGTCAAGCCGTGGATCCTGCTCCGGCCGGATTGGGACAAGGAGAGGTCGGAGGTGGCGTGCGTCAGGTCGACGTCGGTGGAGCCGTGCCTCCACTCGCCGCCGATCCTCTCGTGCAGGGCCAAGAAGGAGGTCGACGCGGCCACCGTCAAGCCGTACGTTCGGCACTGCGAGGATGTCGGGTTCGGTCTCAAGTTGTTCGATAGCTAATTTTTTGGAGAAGTGACTTCTTCGGTTTCACGTTCGGAATTGCGTTCGTTACGTCACGTCCTGTGGATTAACTAGGCCTTTTGGAGATTCGTTATATTCGTTTGGACTCGTATACACCTGAAAATGCACAAAATGTATTATGTAAAATGTATTATGTATCTGTATTCAAATTCGTTGTTCATAAAACAATTCGGATATATATATACA ] [-] EMBL CB641394 [ CAGCGGTTGTTGCCGGAGCTCGGCACGGCGGAGCCGGCGAACACGACTGCCGAAGCAGGGAAGGTGAAGGCCGTACTGATCGCTTCTCTGTACTCGGGATATTACGAGAAGATCCGTGGGATGTACTACGAGAATCCAACCAAGACTGGCGAGATCGTCGCGGTGTACCAGCCGAGCCACGAGGAGCAGCAGCAGTACACGTCCAACGAGCACAACCAGAAGGCGCTGGCCGAGATCTATCTGCTCAGCTACTGCGACAAGATCGCCATGAGCGCCTGGTCGACGTTCGGGTACGTGGCCTACAGCTTCGCCGGCGTCAAGCCGTGGATCCTGCTCCGGCCGGACTGGGACAAGGAGAGGTCGGAGGTGGCGTGCGTCAGGTCGACGTCGGTGGAGCCGTGCCTCCACTCGCCGCCGATCCTCTCGTGCAGGGCCAAGAAGGAGGTCGACGCGGCCACCGTCAAGCCGTACGTTCGGCACTGCGAGGATGTCGGGTTCGGTCTCAAGTTGTTCGATAGCTAATTTTTTGGAGAAGTGACTTCTTCGGTTTCACGTTCCGAATTGCGTTCGTTACGTCACGTCCTGTGGATTAACTAGGCCTTTTGGAGATTCGTTATATTCGTTTGGACTCGTATACCCCTGAAAATGCACAAAATGTATTATGTAAAATGTATTATGTATCTGTATTCAAATTCGTTCGTCATAAAACAATTCGGATATATATATCCACAAAAAAAAAG ] [+] EMBL CB640020 [ ACTGATCGCTTCTCTGTACTCGGGATATTACGAGAAGATCCGTGGGATGTACTACGAGAATCCAACCAAGACTGGCGAGATCGTCGCGGTGTACCAGCCGAGCCACGAGGAGCAGCAGCAGTACACGTCCAACGAGCACAACCAGAAGGCGCTGGCCGAGATCTATCTGCTCAGCTACTGCGACAAGATCGCCATGAGCGCCTGGTCGACGTTCGGGTACGTGGCCTACAGCTTCGCCGGCGTCAAGCCGTGGATCCTGCTCCGGCCGGACTGGGACAAGGAGAGGTCGGAGGTGGCGTGCGTCAAGTCGACGTCGGTGGAGCCGTGCCTCCACTCGCCGCCGATCCTCTCGTGCAGGGCCAAGAAGGAGGTCGACGCGGCCACCGTCAAGCCGTACGTTCGGCACTGCGAGGATGTCGGGTTCGGTCTCAAGTTGTTCGATAGCTAATTTTTTGGAGAAGTGACTTCTTCGGTTTCACGTTCCGAATTGCGTTCGTTACGTCACGTCCTGTGGATT ] [-] EMBL CF312679 [ AGCCGTGGATCCTGCTCCGGCCGGACTGGGACAAGGAGAGGTCGGAGGTGGCGTGCGTCAGGTCGACGTCGGTGGAGCCGTGCCTCCACTCGCCGCCGATCCTTTCGTGCAGGGCCAAGAAGGAGGTCGACGCGGCCACTGTCAAGCCGTACGTTCGGCACTGCGAGGATGTCGGGTTCGGTCTCAAGTTGTTCGATAGCTAATTTTTTGGAGAAGTGACTTCTTCGGTTTCACGTTCCGAATTGCGTTCGTTACGTCACGTCCTGTGGATTAACTAGGCCTTTTGGAGATTCGTTATATTCGTTTGGACTCGTATACACCTGAAAATGCACAAAATGTATTATGTAAAATGTATTATGTATCTGTATTCAAATTCGTTCTTCATAAAACAATTCGGATATATATta ] [+] EMBL BQ906461 [ TTTGGAGATTCGTTATATTCGTTTGGACTCGTATACACCTGAAAATGCACAAAATGTATTATGTAAAATGTATTATGTATCTGTATTCAAATTCGTTCTTCACCANACAATTCGGATATATATATACACACAAAA ] consensusID : consensus_14127#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 839 fasta sequence [TACTCGAGTGGTCCCTGGATTTACTGGAGTAGCAGACAAACTTAAGCATCTTGGGAGGCCTCATGCCCTCGTGAAAGTAGGTGGTCCGAGATGGATAATTTCTGCCGTGCATGTTGCCAGCAATAATGCTGGTAACAACGCTGTTGAGAGTGATGACAAATCTACAACAAAGTAAACTTTTGTTCCTATATGGGGGCTGTTCTGAGAGGAAAAAAAAGTACAGCACGATGTTTATTTTGACAAAATGAAAATGAAGCCCCGAAAAACGTCTCTGTACCAGCCACTGCAACCAAATCTCTGCCCCAACCCCAGGACAAGCTTCTCGGAGGACTACTCTCTGCCGCATTCGAAGAATCCTCATGTCAGAGCAGATACAAATCATCTCTCTACCGGAAGAAGTCTCCGTTCCCTCTGTCCCCTTACCTGGTTCAGAAGCTGCGGAAGTACGAGGCCTACCACAAGAAGTGCGGCCCTGGCACGAAGCGCTACCGGAAGGCGATCGAGCAGCTCAAGGCGGGGCGCAACGCCGACAACGCCGAGTGCAAGTACGTGGTGTGGTTCCCCTGCAACGGCCTCGGCAACCGCATGCTCACCATCGCCTCCACCTTCCTGTACGCGCTCATCTCCAACCGCGTCCTCCTCATGCACGTCGCGGCGGAGCAGGAGGGCCTCTTCTGCGAGCCGTTCCCGGGGAGCTCGTGGGTGCTCCCGGGCGACTTCCCCCACAACAACCCGCAGGGCCTGCACATCGGCGCGCCGGAGAGCTACGTCAACATGCTCAAGAAACACGTCGTCCGCAACGACGACCCCGGCAGCGTGTCGGCGTCGTCGCTGCCGCC] [+] EMBL CB641472 [TACTCGAGTGGTCCCTGGATTTACTGGAGTAGCAGACAAACTTAAGCATCTTGGGAGGCCTCATGCCCTCGTGAAAGTAGGTGGTCCGAGATGGATAATTTCTGCCGTGCATGTTGCCAGCAATAATGCTGGTAACAACGCTGTTGAGAGTGATGACAAATCTACAACAAAGTAAACTTTTGTTCCTATATGGGGGCTGTTCTGAGAGGAAAAAAAAGTACAGCACGATGTTTATTTTGACAAAATGAAAATGAAGCCCCGAAAAACGTCTCTGTACCAGCCACTGCAACCAAATCTCTGCCCCAACCCCAGGACAAGCTTCTCGGAGGACTACTCTCTGCCGCATTCGAAGAATCCTCATGTCAGAGCAGATACAAATCATCTCTCTACCGGAAGAAGTCTCCGTTCCCTCTGTCCCCTTACCTGGTTCAGAAGCTGCGGAAGTACGAGGCCTACCACAAGAAGTGCGGCCCTGGCACGAAGCGCTACCGGAAGGCGATCGAGCAGCTCAAGGCGGGGCGCAACGCCGACAACGCCGAGTGCAAGTACGTGGTGTGGTTCCCCTGCAACGGCCTCGGCAACCGCATGCTCACCATCGCCTCCACCTTCCTGTACGCGCTCATCTCCAACCGCGTCCTCCTCATGCACGTCGCGGCGGAGCAGGAGGGCCTCTTCTGCGAGCCGTTCCCGGGGAGCTCGTGGGTGCTCCCGGGCGACTTCCCCCACAACAACCCGCAGGGCCTGCACATCGGCGCGCCGGAGAGCTACGTCAACATGCTCAAGAAACACGTCGTCCGCAACGACGACCCCGGCAGCGTGTCGGCGTCGTCGCTGCCGCC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14127#0 CATCTCGCCTCGAAGGAGGAGTAGGAGGAAGAGAGAAGCCGGCACAAGCGAGCCCAGCAA 60 consensus_14127#1 ------------------------------------------------------------ consensus_14127#0 ACGCACGGCACCACGGATCATTGGGATCAAAACACGAGAGCTTAATTGAGAAGCAGAGAA 120 consensus_14127#1 ------------------------------------------------------------ consensus_14127#0 GGAGATCAAGAAAAGCAGAGCAAAGCCGCCGGCGAAGAGGGAGGAGGTGGCCGGTGGGAT 180 consensus_14127#1 ---------------------------------------TACTCGAGTGGTCCCTGG-AT 20 **** * *** ** consensus_14127#0 GGACGTGAAGCGGGCCCGGAGCCCGCGGGCTCCGGGCGTCGACGCCGACGACGACAAGAA 240 consensus_14127#1 TTAC-TGGAGTAGCAGACAAACTTAAGCATCTTGGGAGGCCTCATGCCCTCGTGAAAGTA 79 ** ** ** * * * * *** * * * * *** * consensus_14127#0 GCGGGCCGCCGAGTGGCGCGGCGCCGTCCGGCCGCACATGGTGCTGGTCGGCTTCCTCAT 300 consensus_14127#1 GGTGGTC--CGAGATGGATAAT----TTCTGCCGTGCATGTTGCCAGCAATAATGCTGGT 133 * ** * **** * * * **** **** *** * * ** * consensus_14127#0 CACCCTGCCCGTCCTGGTCTTCGTCT-TCGGCGGCCGCTGGGGCTCCTTCCAAACCACCT 359 consensus_14127#1 AACAACGCTGTTGAGAGTGATGACAAATCTACAACAAAGTAAACTTTTGTT--CCTATAT 191 ** ** * ** * ** * * ** * * * * consensus_14127#0 CCGCCCCCAACGTCGGCGGCCGCCACGTCGTCCCCGGCGGCGTAACAACGACACAA-AAA 418 consensus_14127#1 GGGGGCTGTTCTGAGAGGAAAAAAAAGTACAGCACGATG--TTTATTTTGACAAAATGAA 249 * * * * * * ** * ** * * * **** ** ** consensus_14127#0 AATGAAGCCCCGAAAAACGTCTCTGTACCAGCCACTGCAACCAAATCTCTGCCCCAACCC 478 consensus_14127#1 AATGAAGCCCCGAAAAACGTCTCTGTACCAGCCACTGCAACCAAATCTCTGCCCCAACCC 309 ************************************************************ consensus_14127#0 CAGGACAAGCTTCTCGGAGGACTACTCTCTGCCGCATTCGAAGAATCCTCATGTCAGAGC 538 consensus_14127#1 CAGGACAAGCTTCTCGGAGGACTACTCTCTGCCGCATTCGAAGAATCCTCATGTCAGAGC 369 ************************************************************ consensus_14127#0 AGATACAAATCATCTCTCTACCGGAAGAAGTCTCCGTTCCCTCTGTCCCCTTACCTGGTT 598 consensus_14127#1 AGATACAAATCATCTCTCTACCGGAAGAAGTCTCCGTTCCCTCTGTCCCCTTACCTGGTT 429 ************************************************************ consensus_14127#0 CAGAAGCTGCGGAAGTACGAGGCCTACCACAAGAAGTGCGGCCCTGGCACGAAGCGCTAC 658 consensus_14127#1 CAGAAGCTGCGGAAGTACGAGGCCTACCACAAGAAGTGCGGCCCTGGCACGAAGCGCTAC 489 ************************************************************ consensus_14127#0 CGGAAGGCGATCGAGCAGCTCAAGGCGGGGCGCAACGCCGACAACGCCGAGTGCAAGTAC 718 consensus_14127#1 CGGAAGGCGATCGAGCAGCTCAAGGCGGGGCGCAACGCCGACAACGCCGAGTGCAAGTAC 549 ************************************************************ consensus_14127#0 GTGGTGTGGTTCCCCTGCAACGGCCTCGGCAACCGCATGCTCACCATCGCCTCCACCTTC 778 consensus_14127#1 GTGGTGTGGTTCCCCTGCAACGGCCTCGGCAACCGCATGCTCACCATCGCCTCCACCTTC 609 ************************************************************ consensus_14127#0 CTGTACGCGCTCATCTCCAACCGCGTCCTCCTCATGCACGTCGCGGCGGAGCAGGAGGGC 838 consensus_14127#1 CTGTACGCGCTCATCTCCAACCGCGTCCTCCTCATGCACGTCGCGGCGGAGCAGGAGGGC 669 ************************************************************ consensus_14127#0 CTCTTCTGCGAGCCGTTCCCGGGGAGCTCGTGGGTGCTCCCGGGCGACTTCCCCCACAAC 898 consensus_14127#1 CTCTTCTGCGAGCCGTTCCCGGGGAGCTCGTGGGTGCTCCCGGGCGACTTCCCCCACAAC 729 ************************************************************ consensus_14127#0 AACCCGCAGGGCCTGCACATCGGCGCGCCGGAGAGCTACGTCAACATGCTCAAGAACAAC 958 consensus_14127#1 AACCCGCAGGGCCTGCACATCGGCGCGCCGGAGAGCTACGTCAACATGCTCAAGAAACAC 789 ******************************************************** ** consensus_14127#0 GTCGTCCGCAACGACGACCCCGGCAGCGTGTCGGCGTCGTCGCTGCCGCCGTACGTGTAC 1018 consensus_14127#1 GTCGTCCGCAACGACGACCCCGGCAGCGTGTCGGCGTCGTCGCTGCCGCC---------- 839 ************************************************** consensus_14127#0 CTCCACGTCGAGCAGTTCCGGCTGAAGCTGTCCGACAACATCTTCTGCGACGAGGACCAG 1078 consensus_14127#1 ------------------------------------------------------------ consensus_14127#0 TTGATTCTCAACAAGTTCAACTGGATGATACTCAAATCTGACAGCTACTTCGCGCCGGCG 1138 consensus_14127#1 ------------------------------------------------------------ consensus_14127#0 CTGTTCATGACGCCGATGTACGAGAAGGAGCTGGAAAAGATGTTCCCGCAGAAGGAGTCA 1198 consensus_14127#1 ------------------------------------------------------------ consensus_14127#0 GTGTTCCATCATCTTGGGAGGTACCTGTTCCATCCGACGAACAAAGTATGGGGAATCGTG 1258 consensus_14127#1 ------------------------------------------------------------ consensus_14127#0 AGCAGGTACTACGAAGCGTACCTTGCCAGAGTCGACGAGAAAATCGGGTTCCAGATACGG 1318 consensus_14127#1 ------------------------------------------------------------ consensus_14127#0 ATCTTCCCGGAGAAGCCGATAAAATTCGAGAACATGTATGATCAGCTGACGAGGTGCATC 1378 consensus_14127#1 ------------------------------------------------------------ consensus_14127#0 AGGGAGCAGCGGTTGTTGCCGGAGCTCGGCACGGCGGAGCCGGCGAACACGACTGCCGAA 1438 consensus_14127#1 ------------------------------------------------------------ consensus_14127#0 GCAGGGAAGGTGAAGGCCGTACTGATCGCTTCTCTGTACTCGGGATATTACGAGAAGATC 1498 consensus_14127#1 ------------------------------------------------------------ consensus_14127#0 CGTGGGATGTACTACGAGAATCCAACCAAGACTGGCGAGATCGTCGCGGTGTACCAGCCG 1558 consensus_14127#1 ------------------------------------------------------------ consensus_14127#0 AGCCACGAGGAGCAGCAGCAGTACACGTCCAACGAGCACAACCAGAAGGCGCTGGCCGAG 1618 consensus_14127#1 ------------------------------------------------------------ consensus_14127#0 ATCTATCTGCTCAGCTACTGCGACAAGATCGCCATGAGCGCCTGGTCGACGTTCGGGTAC 1678 consensus_14127#1 ------------------------------------------------------------ consensus_14127#0 GTGGCCTACAGCTTCGCCGGCGTCAAGCCGTGGATCCTGCTCCGGCCGGACTGGGACAAG 1738 consensus_14127#1 ------------------------------------------------------------ consensus_14127#0 GAGAGGTCGGAGGTGGCGTGCGTCAGGTCGACGTCGGTGGAGCCGTGCCTCCACTCGCCG 1798 consensus_14127#1 ------------------------------------------------------------ consensus_14127#0 CCGATCCTCTCGTGCAGGGCCAAGAAGGAGGTCGACGCGGCCACCGTCAAGCCGTACGTT 1858 consensus_14127#1 ------------------------------------------------------------ consensus_14127#0 CGGCACTGCGAGGATGTCGGGTTCGGTCTCAAGTTGTTCGATAGCTAATTTTTTGGAGAA 1918 consensus_14127#1 ------------------------------------------------------------ consensus_14127#0 GTGACTTCTTCGGTTTCACGTTCCGAATTGCGTTCGTTACGTCACGTCCTGTGGATTAAC 1978 consensus_14127#1 ------------------------------------------------------------ consensus_14127#0 TAGGCCTTTTGGAGATTCGTTATATTCGTTTGGACTCGTATACACCTGAAAATGCACAAA 2038 consensus_14127#1 ------------------------------------------------------------ consensus_14127#0 ATGTATTATGTAAAATGTATTATGTATCTGTATTCAAATTCGTTCTTCATAAAACAATTC 2098 consensus_14127#1 ------------------------------------------------------------ consensus_14127#0 GGATATATATATACACACAAAAAAAGAGA 2127 consensus_14127#1 ----------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||