These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14148#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1843 fasta sequence [AGAGCCTTAAGAGGCGGGTGAGAGGCGGAGGAGAGGAGACTAGAGAGATCTGAGCTCTGGTCAGCCGAGCCAAGCCTGCCGGTCGCCGGAGGAGGCAACGACGACCATGATGGCGCCGTCCTTGTCCACCGCCGTCTCCTCTCTTCTCCTCCTCCTCCTCCTAGCCGCTGCTATCTCCGTCTCCTCCTCACCGCCGATGCCGGAGGACAGCATCCGGGTCATCTCCGCCGAGAAAAGGATCGACCTCACCAGCCCCATAGTCAAAGTTTTCCTCACACTAAAGCTCGAGAATGATGCCACTGCCCCTGAAGCATCTCAAGTTCTACTCGCATTCACACCCACAGAGGTTGAACATCTTGCGATTGTCAAGGCGACCAGAGCGGAGGGGAAGCGCAAGAAGAAGATATATGTGCCTCTCTCTGTGAAAGCCTCTGATCTTGCTGCCGCTCCAAATGGTGCTCGCCTGTACTCCATTTTGCTGAGCACTCCATTGAAACCTGCTGAGGTGACGACGCTGGAAGTATTTTATGCTTTGACACACTCTTTGGAGCCCTTCCCAGCAGAGATCACCCAGTCAGATCCCCAGCTGGTTTACTACCGTGACAGTGCTGTGCTTCTATCTCCGTACCATGTTCTGGAGCAGGTTACCTACATCAAAATGCCGAGCAATAGGGTGGAGTCCTTTACAAGGGTGGACCCCACCAGTCGAGCTGGTAATGAAGTGAAATACGGCGCATACAACAACCAGCTTCCAAACTCGTATGTGCCCATACTT-GTGCATTATGAAAATAATCGTCCGTTTGCTGTTGTTGAGGAATTTGTGCGCAAGGTGGAGATTTCTCATTGGGGGAATGTCCAAATCACTGAGCAGTATAAGCTGAAACATGGTGGTGCTCAGCACAAAGGAGTCTTTTCAAGGCTTGAGTATCAATCCAGGCCTTCTATAAGTGGAGTGTCATCATTTAAGAATCTTCTTGCAAGGTTGCCTCCTCGAGTTCATTCAGTATACTATCGTGATGAGATCGGCAACATATCTTCATCCCATTTGCGTAGTGATTCGCACAAGTCAGAACTTGAAATTGAGCCCAGATATCCATTATTTGGTGGTTGGCACTGCACGTTCACCATTGGCTATGGTTTGCCATTGCAAGATTTTCTCTTTGAATCAGATGATGGTCGACGCTACATAAATCTTACTTTTGGATGCCCTCTGTTGGATACGGTGGTAGATGATCTTACCATCAAAGTCGTGCTTCCTGAGGGATCGACAAGTCCACAAGCTGTAGTTCCTTTCCTGACGGAACAATATCTTGAGACTAGTTATTCATACCTTGATGTTGTTGGAAGGACGACAGTTGTACTAAAGAAGAGAAACGTAGTTGGAGAGCACAATGTTCCTTT-CCAGGTGTATTACGAATTCAAT-CCGATCTTCAT-GCTCGCAGAACCGTTGATGCTGATATCA-GCCGTGTTCCTGTTCTTTGTAGCCTGCATTGCTTATCTTCACATGGATCTTTCCATTGGGAAATCATAGGCTCCTTGAAATATTTAGAGGCGCTCTCCGCACTTGCCCTTCTAATTATCACAGTTGAATCAAGGCTGCCTTTTGTGTTAGTTTGTACGGTTCCCGTGGGGGAGAAGATGGTCTTTTTGTAGAAC-GTTGTCGTTGTAGGAATGGGAT-GATGAGGATGACTTTATATAAGTATCCATACTTGATTGATCTGCTCACTTAACTACGTTACGTACCGCTTTGTTCCTAACTGTGGTATTAGCTGTTGCACTCACATAAGTGCTCACTTTTGTGGAGAGGGAGACTTGAAGAATTGCGCCAGAATCATTGTGGCCT] [+] EMBL CB621266 [AGAGCCTTAAGAGGCGGGTGAGAGGCGGAGGAGAGGAGACTAGAGAGATCTGAGCTCTGGTCAGCCGAGCCAAGCCTGCCGGTCGCCGGAGGAGGCAACGACGACCATGATGGCGCCGTCCTTGTCCACCGCCGTCTCCTCTCTCCTCCTCCTCCTCCTCCTAGCCGCTGCTATCTCCGTCTCCTCCTCACCGCCGATGCCGGAGGACAGCATCCGGGTCATCTCCGCCGAGAAAAGGATCGACCTCACCAGCCCCATAGTCAAAGTTTTCCTCACACTAAAGCTCGAGAATGATGCCACTGCCCCTGAAGCATCTCAAGTTCTACTCGCATTCACACCCACAGAGGTTGAACATCTTGCGATTGTCAAGGCGACCAGAGCGGAGGGGAAGCGCAAGAAGAAGATATATGTGCCTCTCTCTGTGAAAGCCTCTGATCTTGCTGCCGCTCCAAATGGTGCTCGCCTGTACTCCATTTTGCTGAGCACTCCATTGAAACCTGCTGAGGTGACGACGCTGGAAGTATTTTATGCTTTGACACACTCTTTGGAGCCCTTCCCAGCAGAGATCACCCAGTCAGATCCCCAGCTGGTTTACTACCGTGACAGTGCTGTGCTTCTATCTCCGTACCATGTTCTGGAGCAGGTTACCTACATCAAAATGCCGAGCAATAGGGTGGAGTCCTTTACAAGGGTGGACCCCACCAGTCGAGCTGGTAATGAAGTGAAATACGGCGCATACAACAACCAGCTTCCAAACTCGTATGTGCCCATACTT GTGCAT ] [+] EMBL AK065083 [ AGATCTGAGCTCTGGTCAGCCGAGCCAAGCCTGCCGGTCGCCGGAGGAGGCAACGACGACCATGATGGCGCCGTCCTTGTCCACCGCCGTCTCCTCTCTTCTCCTCCTCCTCCTCCTAGCCGCTGCTATCTCCGTCTCCTCCTCACCGCCGATGCCGGAGGACAGCATCCGGGTCATCTCCGCCGAGAAAAGGATCGACCTCACCAGCCCCATAGTCAAAGTTTTCCTCACACTAAAGCTCGAGAATGATGCCACTGCCCCTGAAGCATCTCAAGTTCTACTCGCATTCACACCCACAGAGGTTGAACATCTTGCGATTGTCAAGGCGACCAGAGCGGAGGGGAAGCGCAAGAAGAAGATATATGTGCCTCTCTCTGTGAAAGCCTCTGATCTTGCTGCCGCTCCAAATGGTGCTCGCCTGTACTCCATTTTGCTGAGCACTCCATTGAAACCTGCTGAGGTGACGACGCTGGAAGTATTTTATGCTTTGACACACTCTTTGGAGCCCTTCCCAGCAGAGATCACCCAGTCAGATCCCCAGCTGGTTTACTACCGTGACAGTGCTGTGCTTCTATCTCCGTACCATGTTCTGGAGCAGGTTACCTACATCAAAATGCCGAGCAATAGGGTGGAGTCCTTTACAAGGGTGGACCCCACCAGTCGAGCTGGTAATGAAGTGAAATACGGCGCATACAACAACCAGCTTCCAAACTCGTATGTGCCCATACTT GTGCATTATGAAAATAATCGTCCGTTTGCTGTTGTTGAGGAATTTGTGCGCAAGGTGGAGATTTCTCATTGGGGGAATGTCCAAATCACTGAGCAGTATAAGCTGAAACATGGTGGTGCTCAGCACAAAGGAGTCTTTTCAAGGCTTGAGTATCAATCCAGGCCTTCTATAAGTGGAGTGTCATCATTTAAGAATCTTCTTGCAAGGTTGCCTCCTCGAGTTCATTCAGTATACTATCGTGATGAGATCGGCAACATATCTTCATCCCATTTGCGTAGTGATTCGCACAAGTCAGAACTTGAAATTGAGCCCAGATATCCATTATTTGGTGGTTGGCACTGCACGTTCACCATTGGCTATGGTTTGCCATTGCAAGATTTTCTCTTTGAATCAGATGATGGTCGACGCTACATAAATCTTACTTTTGGATGCCCTCTGTTGGATACGGTGGTAGATGATCTTACCATCAAAGTCGTGCTTCCTGAGGGATCGACAAGTCCACAAGCTGTAGTTCCTTTCCTGATGGAACAATATCTTGAGACTAGTTATTCATACCTTGATGTTGTTGGAAGGACGACAGTTGTACTAAAGAAGAGAAACGTAGTTGGAGAGCACAATGTTCCTTT CCAGGTGTATTACGAATTCAAT CCGATCTTCAT GCTCGCAGAACCGTTGATGCTGATATCA GCCGTGTTCCTGTTCTTTGTAGCCTGCATTGCTTATCTTCACATGGATCTTTCCATTGGGAAATCATAGGCTCCTTGAAATATTTAGAGGCGCTCTCCGCACTTGCCCTTCTAATTATCACAGTTGAATCAAGGCTGCCTTTTGTGTTAGTTTGTACGGTTCCCGTGGGGGAGAAGATGGTCTTTTTGTAGAAC GTTGTCGTTGTAGGAATGGGAT GATGAGGATGACTTTATATAAGTATCCATACTTGATTGATCTGCTCACTTAACTACGTTACGTACCGCTTTGTTCCTAACTGTGGTATTAGCTGTTGCACTCACATAAGTGCTCACTTTTGTGGAGAGGGAGACTTGAAGAATTGCGCCAGAATCATTGTGGCCT] [+] EMBL CB640386 [ GCCGAGCCAAGCCTGCCGGTCGCCGGAGGAGGCAACGACGACCATGATGGCGCCGTCCTTGTCCACCGCCGTCTCCTCTCTTCTCCTCCTCCTCCTCCTAGCCGCTGCTATCTCCGTCTCCTCCTCACCGCCGATGCCGGAGGACAGCATCCGGGTCATCTCCGCCGAGAAAAGGATCGACCTCACCAGCCCCATAGTCAAAGTTTTCCTCACACTAAAGCTCGAGAATGATGCCACTGCCCCTGAAGCATCTCAAGTTCTACTCGCATTCACACCCACAGAGGTTGAACATCTTGCGATTGTCAAGGCGACCAGAGCGGAGGGGAAGCGCAAGAAGAAGATATATGTGCCTCTCTCTGTGAAAGCCTCTGATCTTGCTGCCGCTCCAAATGGTGCTCGCCTGTACTCCATTTTGCTGAGCACTCCATTGAAACCTGCTGAGGTGACGACGCTGGAAGTATTTTATGCTT ] [+] EMBL CB626986 [ AGCCAATCCTGCCGGTCGCCGGAGGAGGCAACGACGACCATGATGGCGCCGTCCTTGTCCACCGCCGTCTCCTCTCTTCTCCTCCTCCTCCTCCTAGCCGCTGCTATCTCCGTCTCCTCCTCACCGCCGATGCCGGAGGACAGCATCCGGGTCATCTCCGCCGAGAAAAGGATCGACCTCACCAGCCCCATAGTCAAAGTTTTCCTCACACTAAAGCTCGAGAATGATGCCACTGCCCCTGAAGCATCTCAAGTTCTACTCGCATTCACACCCACAGAGGTTGAACATCTTGCGATTGTCAAGGCGACCAGAGCGGAGGGGAAGCGCAAGAAGAAGATATATGTGCCTCTCTCTGTGAAAGCCTCTGATCTTGCTGCCGCTCCAAATGGTGCTCGCCTGTACTCCATTTTGCTGAGCACTCCATTGAAACCTGCTGAGGTGACGACGCTGGAAGTATTTTATGCTTTGACACACTCTTTGGAGCCCTTCCCAGCAGAGATCACCCAGTCAGATCCCCAGCTGGTTTACTACCGTGACAGTGCTGTGCTTCTATCTCCGTACCATGTTCTGGAGCAGGTTACCTACATCAAAATGCCGAGCAATAGGGTGGAGTCCTTTACAAGGGTGGACCCCACCAGTCGAGCTGGTAATGAAGTGAAATACGGCGCATACAACAACCAGCTTCCAAACTCGTATGTGCCCATACTT GTGCATTATGAAAATAATCGTCCGTTTGCTGTTGTTGAGGAATTTGTGCGCAAGGTGGAGATTTCTCATTGNGGGAATGTCCAAATCACTGAGCAGTATAAGCTGAAACATGGTGGTGCTCAGCACAAAGGAGTCTTTTCAAGGCTT ] [+] EMBL OSR17291A [ TCCTCCTCCTCCTCCTAGCCGCTGCTATCTCCGTCTCCTCCTCACCGCCGATGCCGGAGNCCAGCATCCGGGTCATCTCCGCCGAGAAAAGGATCGACCTCACCAGCCCCATAGTCAAAGTTTTCCTCACACTAAAGCTCGAGAATGATGCCACTGCCCCTGAAGCATCTNAAGTTCTACTCGCATTCACACCCACAGAGGTTGAACATCTTGCGATTGTCAAGGCGACCAGAGCGGAGGGGAAGCGCAAGAAGAAGnt ] [+] EMBL AK059710 [ CACACTAAAGCTCGAGAATGATGCCACTGCCCCTGAAGCATCTCAAGTTCTACTCGCATTCACACCCACAGAGGTTGAACATCTTGCGATTGTCAAGGCGACCAGAGCGGAGGGGAAGCGCAAGAAGAAGATATATGTGCCTCTCTCTGTGAAAGCCTCTGATCTTGCTGCCGCTCCAAATGGTGCTCGCCTGTACTCCATTTTGCTGAGCACTCCATTGAAACCTGCTGAGGTGACGACGCTGGAAGTATTTTATGCTTTGACACACTCTTTGGAGCCCTTCCCAGCAGAGATCACCCAGTCAGATCCCCAGCTGGTTTACTACCGTGACAGTGCTGTGCTTCTATCTCCGTACCATGTTCTGGAGCAGGTTACCTACATCAAAATGCCGAGCAATAGGGTGGAGTCCTTTACAAGGGTGGACCCCACCAGTCGAGCTGGTAATGAAGTGAAATACGGCGCATACAACAACCAGCTTCCAAACTCGTATGTGCCCATACTT GTGCATTATGAAAATAATCGTCCGTTTGCTGTTGTTGAGGAATTTGTGCGCAAGGTGGAGATTTCTCATTGGGGGAATGTCCAAATCACTGAGCAGTATAAGCTGAAACATGGTGGTGCTCAGCACAAAGGAGTCTTTTCAAGGCTTGAGTATCAATCCAGGCCTTCTATAAGTGGAGTGTCATCATTTAAGAATCTTCTTGCAAGGTTGCCTCCTCGAGTTCATTCAGTATACTATCGTGATGAGATCGGCAACATATCTTCATCCCATTTGCGTAGTGATTCGCACAAGTCAGAACTTGAAATTGAGCCCAGATATCCATTATTTGGTGGTTGGCACTGCACGTTCACCATTGGCTATGGTTTGCCATTGCAAGATTTTCTCTTTGAATCAGATGATGGTCGACGCTACATAAATCTTACTTTTGGATGCCCTCTGTTGGATACGGAGGTAGATGATCTTACCATCAAAGTCGTGCTTCCTGAGGGATCGACAAGTCCACAAGCTGTAGTTCCTTTCCTGATGGAACAATATCTTGAGACTAGTTATTCATACCTTGATGTTGTTGGAAGGACGACAGTTGTACTAAAGAAGAGAAACGTAGTTGGAGAGCACAATGTTCCTTT CCAGGTGTATTACGAATTCAAT CCGATCTTCAT GCTCGCAGAACCGTTGATGCTGATATCA GCCGTGTTCCTGTTCTTTGTAGCCTGCATTGCTTATCTTCACATGGATCTTTCCATTGGGAAATCATAGGCTCCTTGAAATATTTAGAGGCGCTCTCCGCACTTGCCCTTCTAATTATCACAGTTGAATCAAGGCTGCCTTTTGTGTTAGTTTGTACGGTTCCCGTGGGGGAGAAGATGGTCTTTTTGTAGAAC GTTGTCGTTGTAGGAATGGGAT GATGAGGATGACTTTATATAAGTATCCATACTTGAT ] [+] EMBL AU030422 [ TGCTGCCGCTCCAAATGGTGCTCGCCTGTACTCCATTTTGCTGAGCACTCCATTGAAACCTGCTGAGGTGACGACGCTGGAAGTATTTTATGCTTTGACACACTCTTTGGAGCCCTTCCCAGCAGAGATCACCCAGTCAGATCCCCAGCTGGTTTACTACCGTGACAGTGCTGTGCTTCTATCTCCGTACCATGTTCTGGAGCAGGTTACCTACATCAAAATGCCGAGCAATAGGGTGGAGTCCTTTACAAGGGTGGACCCCACCAGTCGAGCTGGTAATGAAGTGAAATACGGCGCATACAACAACCAGCTTCCAAACTCGTATGTGCCCATACTTGGTGCATTATGGAAATAATCGNCCGTTTGCTGTTGTTGAGG ATTTGTGCGC AGGTGGAGA TTCTCATTGGGGGAATGTCC AATCACTGAGCAGTATAA ] [-] EMBL CB621267 [ TTTCTCATGGGGGGAATGTCCAAATCACTGAGCAGTATAAGCTGAAACATGGTGGTGCTCAGCACAAAGGAGTCTTTTCAAGGCTTGAGTATCAATCCAGGCCTTCTATAAGTGGAGTGTCATCATTTAAGAATCTTCTTGCAAGGTTGCCTCCTCGAGTTCATTCAGTATACTATCGTGATGAGATCGGCAACATATCTTCATCCCATTTGCGTAGTGATTCGCACAAGTCAGAACTTGAAATTGAGCCCAGATATCCATTATTTGGTGGTTGGCACTGCACGTTCACCATTGGCTATGGTTTGCCATTGCAAGATTTTCTCTTTGAATCAGATGATGGTCGACGCTACATAAATCTTACTTTTGGATGCCCTCTGTTGGATACGGTGGTAGATGATCTTACCATCAAAGTCGTGCTTCCTGAGGGATCGACAAGTCCACAAGCTGTAGTTCCTTTCCTGACGGAACAATATCTTGAGACTAGTTATTCATACCTTGATGTTGTTGGAAGGACGACAGTTGTACTAAAGAAGAGAAACGTAGTTGGAGAGCACAATGTTCCTTT CCAGGTGTATTACGAATTCAAT CCGATCTTCAT GCTCGCAGAACCGTTGATGCTGATATCA GCCGTGTTCCTGTTCTTTGTAGCCTGCATTGCTTATCTTCACATGGATCTTTCCATTGGGAAATCATAGGCTCCTTGAAATATTTAGAGGCGCTCTCCGCACTTGCCCTTCTAATTATCACAGTTGAATCAAGGCTGCCTTTTGTGTTAGTTTGTACGGTTCCCGTGGGGGAGAAGATGGTCTTTTTGTAGAACNGTTGTCGTTGTAGGAATGGGAT GATGAGGATGACTTTATATAAGTATCCATACTAAAGGGATCT ] [-] EMBL CB626985 [ TGTCATCATTTAAGAATCTTCTTGCAAGGTTGCCTCCTCGAGTTCATTCAGTATACTATCGTGATGAGATCGGCAACATATCTTCATCCCATTTGCGTAGTGATTCGCACAAGTCAGAACTTGAAATTGAGCCCAGATATCCATTATTTGGTGGTTGGCACTGCACGTTCACCATTGGCTATGGTTTGCCATTGCAAGATTTTCTCTTTGAATCAGATGATGGTCGACGCTACATAAATCTTACTTTTGGATGCCCTCTGTTGGATACGGTGGTAGATGATCTTACCATCAAAGTCGTGCTTCCTGAGGGATCGACAAGTCCACAAGCTGTAGTTCCTTTCCTGACGGAACAATATCTTGAGACTAGTTATTCATACCTTGATGTTGTTGGAAGGACGACAGTTGTACTAAAGAAGAGAAACGTAGTTGGAGAGCACAATGTTCCTTT CCAGGTGTATTACGAATTCAAT CCGATCTTCAT GCTCGCAGAACCGTTGATGCTGATATCA GCCGTGTTCCTGTTCTTTGTAGCCTGCATTGCTTATCTTCACATGGATCTTTCCATTGGGAAATCATAGGCTCCTTGAAATATTTAGAGGCGCTCTCCGCACTTGCCCTTCTAATTATCACAGTTGAATCAAGGCTGCCTTTTGTGTTAGTTTGTACGGTTCCCGTGGGGGAGAAGATGGTCTTTTTGTAGAAC GTGGGCGTTGTAGAAATGGGAT GATGAGGATGACTTTATATAAGTATCCATACTTGATT ] [+] EMBL BI797646 [ GATGGTCGACGCTACATAAATCTTACTTTTGGATGCCCTCTGTTGGATAC GTGGTAGATGATCTTACCATCAAAGTCGTGCTTCCTGAGGGATCGACAAGTCCACAAGCTGTAGTTCCTTTCCTGACGGAACAATATCTTGAGACTAGTTATTCATACCTTGATGTTGTTGGAAGGACGACAGTTGTACTAAAGAAGAGAAACGTAGTTGGAGAGCAC ATGTTCCTTT CCAGGTGTATTACGAATTCAAT CCGATCTTCAT GCTCGCAGAACCGTTGATGCTGATATCA GCCGTGTTCCTGTTCTTTGTAGCCTGCATTGCTTATCTTCACATGGATCTTTCCATTGGGAAATCATAGGCTCCTTGAAATATTTAGAGGCGCTCTCCGCACTTGCCCTTCTAATTATCACAGTTGAATCAAGGCTGCCTTTTGTGTTAGTTTGTACGGTTCCCGTGGGGGAGAAGATGGTCTTTTTGTAGAAC GTTGTCGTTGTAGAAATGGGAT GATGAGGATGACTTTATATAAGTATCCATACTTGATTGATCTGCTCACTTAAaaaaa ] [-] EMBL CB638595 [ TTCCTGAGGGATCGACAAGTCCACAAGCTGTAGTTCCTTTCCTGAGGGAACAATATCTTGAGACTAGTTATTCATACCTTGATGTTGTTGGAAGGACGCCAGTTGTACTAAAGAAGAGAAACGTAGTTGGAGAGCACAATGTTCCTTT CCAGGTGTATTACGAATTCAAT CCGATCTTCAT GCTCGCAGAACCGTTGATGCTGATATCA GCCGTGTTCCTGTTCTTTGTAGCCTGCATTGCTTATCTTCACAGGGATCTTTCCATTGGGAAATCATAGGCTCCTTGAAATATTTAGAGGCGCTCTCCGCACTTGCCCTTTTAATTATCACAGTTGAATCAAGGCTGCCTTTTGTGTTAGTTTGTACGGTTCCCG GGGGGAGAAGATGGTCTTTTTGTAGAAC GTTGTCGTTGTAGGAATGGGAT GATGAGGATGACTTTA ] [+] EMBL BI806087 [ TTGTACTAAAGAAGAGAAACGTAGTTGGAGAGCAC ATGTTCCTTT CCAGGTGTATTACGAATTCAAT CCGATCTTCAT GCTCGCAGAACCGTTGATGCTGATATCA CCGTGTTCCTGTTCTTTGTAGCCTGCATTGCTTATCTTCACATGGATCTTTCCATTGGGAAATCATAGGCTCCTTGAAATATTTAGAGGCGCTCTCCGCACTTGCCCTTCTAATTATCACAGTTGAATCAA GCT CCTTTTGTGTTAGTTTGTACGGTTCCCGTGGGGGAGAAGATGGTCTTTTTGTAGAAC GTTGTCGTTGTAGGAATGGGATCGATGAGGATGACTTTATATAAGTATCCATACTTGATTGATCaaaaa ] [+] EMBL AU030423 [ AGCACAATGTTCCTTTCCCAGGTGTATTACGAATTCAATCCCGATCTTCATGGCTCGCAGAACCGTTGATGCTGATATCANCCCGTGTTCCTGTTCTTTGTAGCCTGCATTGCTTATCTTCACATGGATCTTTCCATTGGGAAATCATAGGCTCCTTGAAATATTTAGAGGCGCTCTCCGCACTTGCCCTTCTAATTATCACAGTTGAATCAAGGCTGCCTTTTGTGTTAGTTTGTACGGTTCCCGTGGGGGAGAAGATGGTCTTTTTGTAGAAC GTTGTCGTTGTAGGAATGGGAT GATGAGGATGACTTTATATAAGTATCCATACTTGATTGAaaaaaaa ] consensusID : consensus_14148#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 683 fasta sequence [ATATCCCATCAGCGGTGGTTCCAGGGGGNAGTTCGCAAACTGACAGTGATAAGGCTTGCAGGACTTTGTGCCGAATGAAAAGACGCGCGCGGCTCGTAGGTCTTACCTCGGAGCGCCTTTGTGGATCCGGCGGTAAAGATTGTACCACTCAAACTCGTGCCTCGTGAGGGATCGACAAGTGCGCAAGCGGTAGTTCCTTTCGTGGCGGAGCAATATCTTAGACTGAGTTATTCATACCTTGATGTTGTTGAAAGGACGACAGTTGTACTAAAGAAGAGAAACGTAGTTGGAGAGCACAATGTTCCTTTCCAGGTGTATTACGAATTCAATCCGATCTTCATGCTCGCAGAACCGTTGATGCTGATATCAGCCGTGTTCCTGTTCTTTGTAGCCTGCATTGCTTATCTTCACATGGATCTTTCCATTGGGAAATCATAGGCTCCTTGAAATATTTAGAGGCGCTCTCCGCACTTGCCCTTCTAATTATCACAGTTGAATCAAGGCTGCCTTTTGTGTTAGTTTGTACGGTTCCCGTGGGGGAGAAGATGGTCTTTTTGTGGAACGTTGTCGTTGTAGAAATGGGATGATGAGGATGACTTTATATAAGTATCCATACTTGATTGATCTGCTCACTTAACTACGTTACGTACCGCTTTGTTCCTAAAAAAAAAAAAAAAAAAAAA] [-] EMBL CA762128 [ATATCCCATCAGCGGTGGTTCCAGGGGGNAGTTCGCAAACTGACAGTGATAAGGCTTGCAGGACTTTGTGCCGAATGAAAAGACGCGCGCGGCTCGTAGGTCTTACCTCGGAGCGCCTTTGTGGATCCGGCGGTAAAGATTGTACCACTCAAACTCGTGCCTCGTGAGGGATCGACAAGTGCGCAAGCGGTAGTTCCTTTCGTGGCGGAGCAATATCTTAGACTGAGTTATTCATACCTTGATGTTGTTGAAAGGACGACAGTTGTACTAAAGAAGAGAAACGTAGTTGGAGAGCACAATGTTCCTTTCCAGGTGTATTACGAATTCAATCCGATCTTCATGCTCGCAGAACCGTTGATGCTGATATCAGCCGTGTTCCTGTTCTTTGTAGCCTGCATTGCTTATCTTCACATGGATCTTTCCATTGGGAAATCATAGGCTCCTTGAAATATTTAGAGGCGCTCTCCGCACTTGCCCTTCTAATTATCACAGTTGAATCAAGGCTGCCTTTTGTGTTAGTTTGTACGGTTCCCGTGGGGGAGAAGATGGTCTTTTTGTGGAACGTTGTCGTTGTAGAAATGGGATGATGAGGATGACTTTATATAAGTATCCATACTTGATTGATCTGCTCACTTAACTACGTTACGTACCGCTTTGTTCCTAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_14148#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 431 fasta sequence [AAGGGGCCGATTTNTCATTGGGGGAATGTTCAAATTACTGAGCAGTATAAGCTGNAACATGGTGGTNCTCAGCACAANGGAGTCTTTTCAAGGCTTGAGTATCAATCCAGGCCTTACTATAAGTGGNNGTNTCATCATTTAAGCCNTACTTACTTNTCAAGGTTGCGCTCCCCNGGGTTTCACGTTCAGTGATAACTATCGTGNATGCAGAATCGGTCAACATTATGCTTAGATCCCATATTGCNNTGAGTGATTTCGGCAACATNNTTNAGANCTTGCAAATTGCAGCCCNGATATCCNTCANTTTGCNTGGTNTGNCACNCTANGTNCCNNCNTTGGNCNAANGGTTTCCCCCATTGCAAGANNTNACTGCNATTGAATCTAGATTGGTGCTNCGACGCTACAAGACAAGNCCGTANCTTNTNGAGATG] [+] EMBL AA751490 [AAGGGGCCGATTTNTCATTGGGGGAATGTTCAAATTACTGAGCAGTATAAGCTGNAACATGGTGGTNCTCAGCACAANGGAGTCTTTTCAAGGCTTGAGTATCAATCCAGGCCTTACTATAAGTGGNNGTNTCATCATTTAAGCCNTACTTACTTNTCAAGGTTGCGCTCCCCNGGGTTTCACGTTCAGTGATAACTATCGTGNATGCAGAATCGGTCAACATTATGCTTAGATCCCATATTGCNNTGAGTGATTTCGGCAACATNNTTNAGANCTTGCAAATTGCAGCCCNGATATCCNTCANTTTGCNTGGTNTGNCACNCTANGTNCCNNCNTTGGNCNAANGGTTTCCCCCATTGCAAGANNTNACTGCNATTGAATCTAGATTGGTGCTNCGACGCTACAAGACAAGNCCGTANCTTNTNGAGATG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14148#0 AGAGCCTTAAGAGGCGGGTGAGAGGCGGAGGAGAGGAGACTAGAGAGATCTGAGCTCTGG 60 consensus_14148#1 ------------------------------------------------------------ consensus_14148#2 ------------------------------------------------------------ consensus_14148#0 TCAGCCGAGCCAAGCCTGCCGGTCGCCGGAGGAGGCAACGACGACCATGATGGCGCCGTC 120 consensus_14148#1 ------------------------------------------------------------ consensus_14148#2 ------------------------------------------------------------ consensus_14148#0 CTTGTCCACCGCCGTCTCCTCTCTTCTCCTCCTCCTCCTCCTAGCCGCTGCTATCTCCGT 180 consensus_14148#1 ------------------------------------------------------------ consensus_14148#2 ------------------------------------------------------------ consensus_14148#0 CTCCTCCTCACCGCCGATGCCGGAGGACAGCATCCGGGTCATCTCCGCCGAGAAAAGGAT 240 consensus_14148#1 ------------------------------------------------------------ consensus_14148#2 ------------------------------------------------------------ consensus_14148#0 CGACCTCACCAGCCCCATAGTCAAAGTTTTCCTCACACTAAAGCTCGAGAATGATGCCAC 300 consensus_14148#1 ------------------------------------------------------------ consensus_14148#2 ------------------------------------------------------------ consensus_14148#0 TGCCCCTGAAGCATCTCAAGTTCTACTCGCATTCACACCCACAGAGGTTGAACATCTTGC 360 consensus_14148#1 ------------------------------------------------------------ consensus_14148#2 ------------------------------------------------------------ consensus_14148#0 GATTGTCAAGGCGACCAGAGCGGAGGGGAAGCGCAAGAAGAAGATATATGTGCCTCTCTC 420 consensus_14148#1 ------------------------------------------------------------ consensus_14148#2 ------------------------------------------------------------ consensus_14148#0 TGTGAAAGCCTCTGATCTTGCTGCCGCTCCAAATGGTGCTCGCCTGTACTCCATTTTGCT 480 consensus_14148#1 ------------------------------------------------------------ consensus_14148#2 ------------------------------------------------------------ consensus_14148#0 GAGCACTCCATTGAAACCTGCTGAGGTGACGACGCTGGAAGTATTTTATGCTTTGACACA 540 consensus_14148#1 ------------------------------------------------------------ consensus_14148#2 ------------------------------------------------------------ consensus_14148#0 CTCTTTGGAGCCCTTCCCAGCAGAGATCACCCAGTCAGATCCCCAGCTGGTTTACTACCG 600 consensus_14148#1 ------------------------------------------------------------ consensus_14148#2 ------------------------------------------------------------ consensus_14148#0 TGACAGTGCTGTGCTTCTATCTCCGTACCATGTTCTGGAGCAGGTTACCTACATCAAAAT 660 consensus_14148#1 ------------------------------------------------------------ consensus_14148#2 ------------------------------------------------------------ consensus_14148#0 GCCGAGCAATAGGGTGGAGTCCTTTACAAGGGTGGACCCCACCAGTCGAGCTGGTAATGA 720 consensus_14148#1 ------------------------------------------------------------ consensus_14148#2 ------------------------------------------------------------ consensus_14148#0 AGTGAAATACGGCGCATACAACAACCAGCTTCCAAACTCGTATGTGCCCATACTTGTGCA 780 consensus_14148#1 ------------------------------------------------------------ consensus_14148#2 ------------------------------------------------------------ consensus_14148#0 TTATGAAAATAATCGTCCGTTTGCTGTTGTTGAGGAATTTGTGCGCAAGGTGGAGATTTC 840 consensus_14148#1 ------------------------------------------------------------ consensus_14148#2 ------------------------------------------------------------ consensus_14148#0 TCATTGGGGGAATGTCCAAATCACTGAGCAGTATAAGCTGAAACATGGTGGTGCTCAGCA 900 consensus_14148#1 ------------------------------------------------------------ consensus_14148#2 ------------------------------------------------------------ consensus_14148#0 CAAAGGAGTCTTTTCAAGGCTTGAGTATCAATCCAGGCCTTCTATAAGTGGAGTGTCATC 960 consensus_14148#1 ------------------------------------------------------------ consensus_14148#2 ------------------------------------------------------------ consensus_14148#0 ATTTAAGAATCTTCTTGCAAGGTTGCCTCCTCGAGTTCATTCAGTATACTATCGTGATGA 1020 consensus_14148#1 ------------------------------------------------------------ consensus_14148#2 ------------------------------------------------------------ consensus_14148#0 GATCGGCAACATATCTTCATCCCATTTGCGTAGTGATTCGCACAAGTCAGAACTTGAAAT 1080 consensus_14148#1 ------------------------------------------------------------ consensus_14148#2 ------------------------------------------------------------ consensus_14148#0 TGAGCCCAGATATCCATTATTTGGTGGTTGGCACTGCACGTTCACCA-TTGGCTATGGTT 1139 consensus_14148#1 ---------ATATCCCATCAGCGGTGGTTCCAGGGGGNAGTTCGCAAACTGACAGTGATA 51 consensus_14148#2 ------------------------------------------------------------ consensus_14148#0 TGCCATTGCAAGATTTTCTCTTTGAATCAGATGATGGTCGACGCTACATAAATCTTACTT 1199 consensus_14148#1 AGGC-TTGCAGGACTTTGTGCC-GAATGAAAAGACGCGCGCGGCT-CGTAGGTCTTACCT 108 consensus_14148#2 ------------------------------------------------------------ consensus_14148#0 TTGGATGCCCTCTGTTGGATACGGTGGTAGATGATCTTACCA-TCAAAGTCGTGCTTCCT 1258 consensus_14148#1 CGGAGCGCCTTT--GTGGATCCGGCGGTAAA-GATTGTACCACTCAAACTCGTGCCTCGT 165 consensus_14148#2 -----------------AAGGGGCCGATTTNTCATTGGGGGA---ATGTTCAAATTAC-T 39 * * * * ** * * ** * * consensus_14148#0 GAGGGATCGACAAGTCCACAAGCTGTAGTTCCTTTCCTGACGGAACAATATCTTGAGACT 1318 consensus_14148#1 GAGGGATCGACAAGTGCGCAAGCGGTAGTTCCTTTCGTGGCGGAGCAATATCTTAGACTG 225 consensus_14148#2 GAGCAGT--ATAAGCTGNAACATGGTGGTNCTCAGCACAANGGAGTCTTTTCAAGGCTTG 97 *** * * *** * ** ** * * *** * ** consensus_14148#0 AGTTATTCATACCTTGATGTTGTTGGAAGGACGACAGTTGTACTAAAGAAGAGAAACGTA 1378 consensus_14148#1 AGTTATTCATACCTTGATGTTGTTGAAAGGACGACAGTTGTACTAAAGAAGAGAAACGTA 285 consensus_14148#2 AGT--ATCA-ATCCAGGCCTTACTATAAG--TGGNNGTNTCATCATTTAAGCCNTACTTA 152 *** *** * * * ** * *** * ** * * *** ** ** consensus_14148#0 GTTGGAGAGCACAATGTTCCTTTCCAGGTGTATTACGAATTCAATCCGATCT-TCATGCT 1437 consensus_14148#1 GTTGGAGAGCACAATGTTCCTTTCCAGGTGTATTACGAATTCAATCCGATCT-TCATGCT 344 consensus_14148#2 CTTNT----CAAGGTTGCGCTCCCCNGG-GTTTCACG--TTCAGTGATAACTATCGTGNA 205 ** ** * ** ** ** ** * *** **** * * ** ** ** consensus_14148#0 CGCAGAACCGTTGATGCTGATATCAGCCGTGTTCCTGTTCTTTGTAGCCTGCATTGCTTA 1497 consensus_14148#1 CGCAGAACCGTTGATGCTGATATCAGCCGTGTTCCTGTTCTTTGTAGCCTGCATTGCTTA 404 consensus_14148#2 TGCAGAATCG-----GTCAACATTA----TGCTTAGATCCCATATTGCNNTGAGTGATTT 256 ****** ** * * ** * ** * * * * * ** * ** ** consensus_14148#0 TCTTCACATGGATCTTTCCATTGGGAAATCATAGGCTCCTTGAAATATTTAGAGGCGCTC 1557 consensus_14148#1 TCTTCACATGGATCTTTCCATTGGGAAATCATAGGCTCCTTGAAATATTTAGAGGCGCTC 464 consensus_14148#2 CGGCAACATNN--TTNAGANCTTGCAAATTGCAG---CCCNGATATCCNTCA----NTTT 307 **** * * * **** ** ** ** ** * * consensus_14148#0 TCCGCACTTGCCCTTCTAATTATCACAGTTGAATCAAGGCTGCCTTTTGTGTTAGTTTGT 1617 consensus_14148#1 TCCGCACTTGCCCTTCTAATTATCACAGTTGAATCAAGGCTGCCTTTTGTGTTAGTTTGT 524 consensus_14148#2 GCNTGGTNTGNCACNCTANGTNCCNNCNTTGGNCNAANGGTTTCCCCCAT-------TGC 360 * ** * *** * * *** ** * * * * ** consensus_14148#0 ACGGTTCCCGTGGGGGAGAAGATGGTCTTTTTGTAGAACGTTGTCGTTGTAGGAATGGGA 1677 consensus_14148#1 ACGGTTCCCGTGGGGGAGAAGATGGTCTTTTTGTGGAACGTTGTCGTTGTAGAAATGGGA 584 consensus_14148#2 AAGANNTNACTGCNATTGAATCTAGATTGGTGCTNCGACGCTACAAGACAAGNCCGTANC 420 * * ** *** * * * * * *** * ** consensus_14148#0 TGATGAGGATGACTTTATATAAGTATCCATACTTGATTGATCTGCTCACTTAACTACGTT 1737 consensus_14148#1 TGATGAGGATGACTTTATATAAGTATCCATACTTGATTGATCTGCTCACTTAACTACGTT 644 consensus_14148#2 TTNTNGAGATG------------------------------------------------- 431 * * **** consensus_14148#0 ACGTACCGCTTTGTTCCTAACTGTGGTATTAGCTGTTGCACTCACATAAGTGCTCACTTT 1797 consensus_14148#1 ACGTACCGCTTTGTTCCTAAAAAAAAAAAAAAAAAAAAA--------------------- 683 consensus_14148#2 ------------------------------------------------------------ consensus_14148#0 TGTGGAGAGGGAGACTTGAAGAATTGCGCCAGAATCATTGTGGCCT 1843 consensus_14148#1 ---------------------------------------------- consensus_14148#2 ---------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||