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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14148#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1843 fasta sequence
[AGAGCCTTAAGAGGCGGGTGAGAGGCGGAGGAGAGGAGACTAGAGAGATCTGAGCTCTGGTCAGCCGAGCCAAGCCTGCCGGTCGCCGGAGGAGGCAACGACGACCATGATGGCGCCGTCCTTGTCCACCGCCGTCTCCTCTCTTCTCCTCCTCCTCCTCCTAGCCGCTGCTATCTCCGTCTCCTCCTCACCGCCGATGCCGGAGGACAGCATCCGGGTCATCTCCGCCGAGAAAAGGATCGACCTCACCAGCCCCATAGTCAAAGTTTTCCTCACACTAAAGCTCGAGAATGATGCCACTGCCCCTGAAGCATCTCAAGTTCTACTCGCATTCACACCCACAGAGGTTGAACATCTTGCGATTGTCAAGGCGACCAGAGCGGAGGGGAAGCGCAAGAAGAAGATATATGTGCCTCTCTCTGTGAAAGCCTCTGATCTTGCTGCCGCTCCAAATGGTGCTCGCCTGTACTCCATTTTGCTGAGCACTCCATTGAAACCTGCTGAGGTGACGACGCTGGAAGTATTTTATGCTTTGACACACTCTTTGGAGCCCTTCCCAGCAGAGATCACCCAGTCAGATCCCCAGCTGGTTTACTACCGTGACAGTGCTGTGCTTCTATCTCCGTACCATGTTCTGGAGCAGGTTACCTACATCAAAATGCCGAGCAATAGGGTGGAGTCCTTTACAAGGGTGGACCCCACCAGTCGAGCTGGTAATGAAGTGAAATACGGCGCATACAACAACCAGCTTCCAAACTCGTATGTGCCCATACTT-GTGCATTATGAAAATAATCGTCCGTTTGCTGTTGTTGAGGAATTTGTGCGCAAGGTGGAGATTTCTCATTGGGGGAATGTCCAAATCACTGAGCAGTATAAGCTGAAACATGGTGGTGCTCAGCACAAAGGAGTCTTTTCAAGGCTTGAGTATCAATCCAGGCCTTCTATAAGTGGAGTGTCATCATTTAAGAATCTTCTTGCAAGGTTGCCTCCTCGAGTTCATTCAGTATACTATCGTGATGAGATCGGCAACATATCTTCATCCCATTTGCGTAGTGATTCGCACAAGTCAGAACTTGAAATTGAGCCCAGATATCCATTATTTGGTGGTTGGCACTGCACGTTCACCATTGGCTATGGTTTGCCATTGCAAGATTTTCTCTTTGAATCAGATGATGGTCGACGCTACATAAATCTTACTTTTGGATGCCCTCTGTTGGATACGGTGGTAGATGATCTTACCATCAAAGTCGTGCTTCCTGAGGGATCGACAAGTCCACAAGCTGTAGTTCCTTTCCTGACGGAACAATATCTTGAGACTAGTTATTCATACCTTGATGTTGTTGGAAGGACGACAGTTGTACTAAAGAAGAGAAACGTAGTTGGAGAGCACAATGTTCCTTT-CCAGGTGTATTACGAATTCAAT-CCGATCTTCAT-GCTCGCAGAACCGTTGATGCTGATATCA-GCCGTGTTCCTGTTCTTTGTAGCCTGCATTGCTTATCTTCACATGGATCTTTCCATTGGGAAATCATAGGCTCCTTGAAATATTTAGAGGCGCTCTCCGCACTTGCCCTTCTAATTATCACAGTTGAATCAAGGCTGCCTTTTGTGTTAGTTTGTACGGTTCCCGTGGGGGAGAAGATGGTCTTTTTGTAGAAC-GTTGTCGTTGTAGGAATGGGAT-GATGAGGATGACTTTATATAAGTATCCATACTTGATTGATCTGCTCACTTAACTACGTTACGTACCGCTTTGTTCCTAACTGTGGTATTAGCTGTTGCACTCACATAAGTGCTCACTTTTGTGGAGAGGGAGACTTGAAGAATTGCGCCAGAATCATTGTGGCCT]
[+] EMBL CB621266 [AGAGCCTTAAGAGGCGGGTGAGAGGCGGAGGAGAGGAGACTAGAGAGATCTGAGCTCTGGTCAGCCGAGCCAAGCCTGCCGGTCGCCGGAGGAGGCAACGACGACCATGATGGCGCCGTCCTTGTCCACCGCCGTCTCCTCTCTCCTCCTCCTCCTCCTCCTAGCCGCTGCTATCTCCGTCTCCTCCTCACCGCCGATGCCGGAGGACAGCATCCGGGTCATCTCCGCCGAGAAAAGGATCGACCTCACCAGCCCCATAGTCAAAGTTTTCCTCACACTAAAGCTCGAGAATGATGCCACTGCCCCTGAAGCATCTCAAGTTCTACTCGCATTCACACCCACAGAGGTTGAACATCTTGCGATTGTCAAGGCGACCAGAGCGGAGGGGAAGCGCAAGAAGAAGATATATGTGCCTCTCTCTGTGAAAGCCTCTGATCTTGCTGCCGCTCCAAATGGTGCTCGCCTGTACTCCATTTTGCTGAGCACTCCATTGAAACCTGCTGAGGTGACGACGCTGGAAGTATTTTATGCTTTGACACACTCTTTGGAGCCCTTCCCAGCAGAGATCACCCAGTCAGATCCCCAGCTGGTTTACTACCGTGACAGTGCTGTGCTTCTATCTCCGTACCATGTTCTGGAGCAGGTTACCTACATCAAAATGCCGAGCAATAGGGTGGAGTCCTTTACAAGGGTGGACCCCACCAGTCGAGCTGGTAATGAAGTGAAATACGGCGCATACAACAACCAGCTTCCAAACTCGTATGTGCCCATACTT GTGCAT ]
[+] EMBL AK065083 [ AGATCTGAGCTCTGGTCAGCCGAGCCAAGCCTGCCGGTCGCCGGAGGAGGCAACGACGACCATGATGGCGCCGTCCTTGTCCACCGCCGTCTCCTCTCTTCTCCTCCTCCTCCTCCTAGCCGCTGCTATCTCCGTCTCCTCCTCACCGCCGATGCCGGAGGACAGCATCCGGGTCATCTCCGCCGAGAAAAGGATCGACCTCACCAGCCCCATAGTCAAAGTTTTCCTCACACTAAAGCTCGAGAATGATGCCACTGCCCCTGAAGCATCTCAAGTTCTACTCGCATTCACACCCACAGAGGTTGAACATCTTGCGATTGTCAAGGCGACCAGAGCGGAGGGGAAGCGCAAGAAGAAGATATATGTGCCTCTCTCTGTGAAAGCCTCTGATCTTGCTGCCGCTCCAAATGGTGCTCGCCTGTACTCCATTTTGCTGAGCACTCCATTGAAACCTGCTGAGGTGACGACGCTGGAAGTATTTTATGCTTTGACACACTCTTTGGAGCCCTTCCCAGCAGAGATCACCCAGTCAGATCCCCAGCTGGTTTACTACCGTGACAGTGCTGTGCTTCTATCTCCGTACCATGTTCTGGAGCAGGTTACCTACATCAAAATGCCGAGCAATAGGGTGGAGTCCTTTACAAGGGTGGACCCCACCAGTCGAGCTGGTAATGAAGTGAAATACGGCGCATACAACAACCAGCTTCCAAACTCGTATGTGCCCATACTT GTGCATTATGAAAATAATCGTCCGTTTGCTGTTGTTGAGGAATTTGTGCGCAAGGTGGAGATTTCTCATTGGGGGAATGTCCAAATCACTGAGCAGTATAAGCTGAAACATGGTGGTGCTCAGCACAAAGGAGTCTTTTCAAGGCTTGAGTATCAATCCAGGCCTTCTATAAGTGGAGTGTCATCATTTAAGAATCTTCTTGCAAGGTTGCCTCCTCGAGTTCATTCAGTATACTATCGTGATGAGATCGGCAACATATCTTCATCCCATTTGCGTAGTGATTCGCACAAGTCAGAACTTGAAATTGAGCCCAGATATCCATTATTTGGTGGTTGGCACTGCACGTTCACCATTGGCTATGGTTTGCCATTGCAAGATTTTCTCTTTGAATCAGATGATGGTCGACGCTACATAAATCTTACTTTTGGATGCCCTCTGTTGGATACGGTGGTAGATGATCTTACCATCAAAGTCGTGCTTCCTGAGGGATCGACAAGTCCACAAGCTGTAGTTCCTTTCCTGATGGAACAATATCTTGAGACTAGTTATTCATACCTTGATGTTGTTGGAAGGACGACAGTTGTACTAAAGAAGAGAAACGTAGTTGGAGAGCACAATGTTCCTTT CCAGGTGTATTACGAATTCAAT CCGATCTTCAT GCTCGCAGAACCGTTGATGCTGATATCA GCCGTGTTCCTGTTCTTTGTAGCCTGCATTGCTTATCTTCACATGGATCTTTCCATTGGGAAATCATAGGCTCCTTGAAATATTTAGAGGCGCTCTCCGCACTTGCCCTTCTAATTATCACAGTTGAATCAAGGCTGCCTTTTGTGTTAGTTTGTACGGTTCCCGTGGGGGAGAAGATGGTCTTTTTGTAGAAC GTTGTCGTTGTAGGAATGGGAT GATGAGGATGACTTTATATAAGTATCCATACTTGATTGATCTGCTCACTTAACTACGTTACGTACCGCTTTGTTCCTAACTGTGGTATTAGCTGTTGCACTCACATAAGTGCTCACTTTTGTGGAGAGGGAGACTTGAAGAATTGCGCCAGAATCATTGTGGCCT]
[+] EMBL CB640386 [ GCCGAGCCAAGCCTGCCGGTCGCCGGAGGAGGCAACGACGACCATGATGGCGCCGTCCTTGTCCACCGCCGTCTCCTCTCTTCTCCTCCTCCTCCTCCTAGCCGCTGCTATCTCCGTCTCCTCCTCACCGCCGATGCCGGAGGACAGCATCCGGGTCATCTCCGCCGAGAAAAGGATCGACCTCACCAGCCCCATAGTCAAAGTTTTCCTCACACTAAAGCTCGAGAATGATGCCACTGCCCCTGAAGCATCTCAAGTTCTACTCGCATTCACACCCACAGAGGTTGAACATCTTGCGATTGTCAAGGCGACCAGAGCGGAGGGGAAGCGCAAGAAGAAGATATATGTGCCTCTCTCTGTGAAAGCCTCTGATCTTGCTGCCGCTCCAAATGGTGCTCGCCTGTACTCCATTTTGCTGAGCACTCCATTGAAACCTGCTGAGGTGACGACGCTGGAAGTATTTTATGCTT ]
[+] EMBL CB626986 [ AGCCAATCCTGCCGGTCGCCGGAGGAGGCAACGACGACCATGATGGCGCCGTCCTTGTCCACCGCCGTCTCCTCTCTTCTCCTCCTCCTCCTCCTAGCCGCTGCTATCTCCGTCTCCTCCTCACCGCCGATGCCGGAGGACAGCATCCGGGTCATCTCCGCCGAGAAAAGGATCGACCTCACCAGCCCCATAGTCAAAGTTTTCCTCACACTAAAGCTCGAGAATGATGCCACTGCCCCTGAAGCATCTCAAGTTCTACTCGCATTCACACCCACAGAGGTTGAACATCTTGCGATTGTCAAGGCGACCAGAGCGGAGGGGAAGCGCAAGAAGAAGATATATGTGCCTCTCTCTGTGAAAGCCTCTGATCTTGCTGCCGCTCCAAATGGTGCTCGCCTGTACTCCATTTTGCTGAGCACTCCATTGAAACCTGCTGAGGTGACGACGCTGGAAGTATTTTATGCTTTGACACACTCTTTGGAGCCCTTCCCAGCAGAGATCACCCAGTCAGATCCCCAGCTGGTTTACTACCGTGACAGTGCTGTGCTTCTATCTCCGTACCATGTTCTGGAGCAGGTTACCTACATCAAAATGCCGAGCAATAGGGTGGAGTCCTTTACAAGGGTGGACCCCACCAGTCGAGCTGGTAATGAAGTGAAATACGGCGCATACAACAACCAGCTTCCAAACTCGTATGTGCCCATACTT GTGCATTATGAAAATAATCGTCCGTTTGCTGTTGTTGAGGAATTTGTGCGCAAGGTGGAGATTTCTCATTGNGGGAATGTCCAAATCACTGAGCAGTATAAGCTGAAACATGGTGGTGCTCAGCACAAAGGAGTCTTTTCAAGGCTT ]
[+] EMBL OSR17291A [ TCCTCCTCCTCCTCCTAGCCGCTGCTATCTCCGTCTCCTCCTCACCGCCGATGCCGGAGNCCAGCATCCGGGTCATCTCCGCCGAGAAAAGGATCGACCTCACCAGCCCCATAGTCAAAGTTTTCCTCACACTAAAGCTCGAGAATGATGCCACTGCCCCTGAAGCATCTNAAGTTCTACTCGCATTCACACCCACAGAGGTTGAACATCTTGCGATTGTCAAGGCGACCAGAGCGGAGGGGAAGCGCAAGAAGAAGnt ]
[+] EMBL AK059710 [ CACACTAAAGCTCGAGAATGATGCCACTGCCCCTGAAGCATCTCAAGTTCTACTCGCATTCACACCCACAGAGGTTGAACATCTTGCGATTGTCAAGGCGACCAGAGCGGAGGGGAAGCGCAAGAAGAAGATATATGTGCCTCTCTCTGTGAAAGCCTCTGATCTTGCTGCCGCTCCAAATGGTGCTCGCCTGTACTCCATTTTGCTGAGCACTCCATTGAAACCTGCTGAGGTGACGACGCTGGAAGTATTTTATGCTTTGACACACTCTTTGGAGCCCTTCCCAGCAGAGATCACCCAGTCAGATCCCCAGCTGGTTTACTACCGTGACAGTGCTGTGCTTCTATCTCCGTACCATGTTCTGGAGCAGGTTACCTACATCAAAATGCCGAGCAATAGGGTGGAGTCCTTTACAAGGGTGGACCCCACCAGTCGAGCTGGTAATGAAGTGAAATACGGCGCATACAACAACCAGCTTCCAAACTCGTATGTGCCCATACTT GTGCATTATGAAAATAATCGTCCGTTTGCTGTTGTTGAGGAATTTGTGCGCAAGGTGGAGATTTCTCATTGGGGGAATGTCCAAATCACTGAGCAGTATAAGCTGAAACATGGTGGTGCTCAGCACAAAGGAGTCTTTTCAAGGCTTGAGTATCAATCCAGGCCTTCTATAAGTGGAGTGTCATCATTTAAGAATCTTCTTGCAAGGTTGCCTCCTCGAGTTCATTCAGTATACTATCGTGATGAGATCGGCAACATATCTTCATCCCATTTGCGTAGTGATTCGCACAAGTCAGAACTTGAAATTGAGCCCAGATATCCATTATTTGGTGGTTGGCACTGCACGTTCACCATTGGCTATGGTTTGCCATTGCAAGATTTTCTCTTTGAATCAGATGATGGTCGACGCTACATAAATCTTACTTTTGGATGCCCTCTGTTGGATACGGAGGTAGATGATCTTACCATCAAAGTCGTGCTTCCTGAGGGATCGACAAGTCCACAAGCTGTAGTTCCTTTCCTGATGGAACAATATCTTGAGACTAGTTATTCATACCTTGATGTTGTTGGAAGGACGACAGTTGTACTAAAGAAGAGAAACGTAGTTGGAGAGCACAATGTTCCTTT CCAGGTGTATTACGAATTCAAT CCGATCTTCAT GCTCGCAGAACCGTTGATGCTGATATCA GCCGTGTTCCTGTTCTTTGTAGCCTGCATTGCTTATCTTCACATGGATCTTTCCATTGGGAAATCATAGGCTCCTTGAAATATTTAGAGGCGCTCTCCGCACTTGCCCTTCTAATTATCACAGTTGAATCAAGGCTGCCTTTTGTGTTAGTTTGTACGGTTCCCGTGGGGGAGAAGATGGTCTTTTTGTAGAAC GTTGTCGTTGTAGGAATGGGAT GATGAGGATGACTTTATATAAGTATCCATACTTGAT ]
[+] EMBL AU030422 [ TGCTGCCGCTCCAAATGGTGCTCGCCTGTACTCCATTTTGCTGAGCACTCCATTGAAACCTGCTGAGGTGACGACGCTGGAAGTATTTTATGCTTTGACACACTCTTTGGAGCCCTTCCCAGCAGAGATCACCCAGTCAGATCCCCAGCTGGTTTACTACCGTGACAGTGCTGTGCTTCTATCTCCGTACCATGTTCTGGAGCAGGTTACCTACATCAAAATGCCGAGCAATAGGGTGGAGTCCTTTACAAGGGTGGACCCCACCAGTCGAGCTGGTAATGAAGTGAAATACGGCGCATACAACAACCAGCTTCCAAACTCGTATGTGCCCATACTTGGTGCATTATGGAAATAATCGNCCGTTTGCTGTTGTTGAGG ATTTGTGCGC AGGTGGAGA TTCTCATTGGGGGAATGTCC AATCACTGAGCAGTATAA ]
[-] EMBL CB621267 [ TTTCTCATGGGGGGAATGTCCAAATCACTGAGCAGTATAAGCTGAAACATGGTGGTGCTCAGCACAAAGGAGTCTTTTCAAGGCTTGAGTATCAATCCAGGCCTTCTATAAGTGGAGTGTCATCATTTAAGAATCTTCTTGCAAGGTTGCCTCCTCGAGTTCATTCAGTATACTATCGTGATGAGATCGGCAACATATCTTCATCCCATTTGCGTAGTGATTCGCACAAGTCAGAACTTGAAATTGAGCCCAGATATCCATTATTTGGTGGTTGGCACTGCACGTTCACCATTGGCTATGGTTTGCCATTGCAAGATTTTCTCTTTGAATCAGATGATGGTCGACGCTACATAAATCTTACTTTTGGATGCCCTCTGTTGGATACGGTGGTAGATGATCTTACCATCAAAGTCGTGCTTCCTGAGGGATCGACAAGTCCACAAGCTGTAGTTCCTTTCCTGACGGAACAATATCTTGAGACTAGTTATTCATACCTTGATGTTGTTGGAAGGACGACAGTTGTACTAAAGAAGAGAAACGTAGTTGGAGAGCACAATGTTCCTTT CCAGGTGTATTACGAATTCAAT CCGATCTTCAT GCTCGCAGAACCGTTGATGCTGATATCA GCCGTGTTCCTGTTCTTTGTAGCCTGCATTGCTTATCTTCACATGGATCTTTCCATTGGGAAATCATAGGCTCCTTGAAATATTTAGAGGCGCTCTCCGCACTTGCCCTTCTAATTATCACAGTTGAATCAAGGCTGCCTTTTGTGTTAGTTTGTACGGTTCCCGTGGGGGAGAAGATGGTCTTTTTGTAGAACNGTTGTCGTTGTAGGAATGGGAT GATGAGGATGACTTTATATAAGTATCCATACTAAAGGGATCT ]
[-] EMBL CB626985 [ TGTCATCATTTAAGAATCTTCTTGCAAGGTTGCCTCCTCGAGTTCATTCAGTATACTATCGTGATGAGATCGGCAACATATCTTCATCCCATTTGCGTAGTGATTCGCACAAGTCAGAACTTGAAATTGAGCCCAGATATCCATTATTTGGTGGTTGGCACTGCACGTTCACCATTGGCTATGGTTTGCCATTGCAAGATTTTCTCTTTGAATCAGATGATGGTCGACGCTACATAAATCTTACTTTTGGATGCCCTCTGTTGGATACGGTGGTAGATGATCTTACCATCAAAGTCGTGCTTCCTGAGGGATCGACAAGTCCACAAGCTGTAGTTCCTTTCCTGACGGAACAATATCTTGAGACTAGTTATTCATACCTTGATGTTGTTGGAAGGACGACAGTTGTACTAAAGAAGAGAAACGTAGTTGGAGAGCACAATGTTCCTTT CCAGGTGTATTACGAATTCAAT CCGATCTTCAT GCTCGCAGAACCGTTGATGCTGATATCA GCCGTGTTCCTGTTCTTTGTAGCCTGCATTGCTTATCTTCACATGGATCTTTCCATTGGGAAATCATAGGCTCCTTGAAATATTTAGAGGCGCTCTCCGCACTTGCCCTTCTAATTATCACAGTTGAATCAAGGCTGCCTTTTGTGTTAGTTTGTACGGTTCCCGTGGGGGAGAAGATGGTCTTTTTGTAGAAC GTGGGCGTTGTAGAAATGGGAT GATGAGGATGACTTTATATAAGTATCCATACTTGATT ]
[+] EMBL BI797646 [ GATGGTCGACGCTACATAAATCTTACTTTTGGATGCCCTCTGTTGGATAC GTGGTAGATGATCTTACCATCAAAGTCGTGCTTCCTGAGGGATCGACAAGTCCACAAGCTGTAGTTCCTTTCCTGACGGAACAATATCTTGAGACTAGTTATTCATACCTTGATGTTGTTGGAAGGACGACAGTTGTACTAAAGAAGAGAAACGTAGTTGGAGAGCAC ATGTTCCTTT CCAGGTGTATTACGAATTCAAT CCGATCTTCAT GCTCGCAGAACCGTTGATGCTGATATCA GCCGTGTTCCTGTTCTTTGTAGCCTGCATTGCTTATCTTCACATGGATCTTTCCATTGGGAAATCATAGGCTCCTTGAAATATTTAGAGGCGCTCTCCGCACTTGCCCTTCTAATTATCACAGTTGAATCAAGGCTGCCTTTTGTGTTAGTTTGTACGGTTCCCGTGGGGGAGAAGATGGTCTTTTTGTAGAAC GTTGTCGTTGTAGAAATGGGAT GATGAGGATGACTTTATATAAGTATCCATACTTGATTGATCTGCTCACTTAAaaaaa ]
[-] EMBL CB638595 [ TTCCTGAGGGATCGACAAGTCCACAAGCTGTAGTTCCTTTCCTGAGGGAACAATATCTTGAGACTAGTTATTCATACCTTGATGTTGTTGGAAGGACGCCAGTTGTACTAAAGAAGAGAAACGTAGTTGGAGAGCACAATGTTCCTTT CCAGGTGTATTACGAATTCAAT CCGATCTTCAT GCTCGCAGAACCGTTGATGCTGATATCA GCCGTGTTCCTGTTCTTTGTAGCCTGCATTGCTTATCTTCACAGGGATCTTTCCATTGGGAAATCATAGGCTCCTTGAAATATTTAGAGGCGCTCTCCGCACTTGCCCTTTTAATTATCACAGTTGAATCAAGGCTGCCTTTTGTGTTAGTTTGTACGGTTCCCG GGGGGAGAAGATGGTCTTTTTGTAGAAC GTTGTCGTTGTAGGAATGGGAT GATGAGGATGACTTTA ]
[+] EMBL BI806087 [ TTGTACTAAAGAAGAGAAACGTAGTTGGAGAGCAC ATGTTCCTTT CCAGGTGTATTACGAATTCAAT CCGATCTTCAT GCTCGCAGAACCGTTGATGCTGATATCA CCGTGTTCCTGTTCTTTGTAGCCTGCATTGCTTATCTTCACATGGATCTTTCCATTGGGAAATCATAGGCTCCTTGAAATATTTAGAGGCGCTCTCCGCACTTGCCCTTCTAATTATCACAGTTGAATCAA GCT CCTTTTGTGTTAGTTTGTACGGTTCCCGTGGGGGAGAAGATGGTCTTTTTGTAGAAC GTTGTCGTTGTAGGAATGGGATCGATGAGGATGACTTTATATAAGTATCCATACTTGATTGATCaaaaa ]
[+] EMBL AU030423 [ AGCACAATGTTCCTTTCCCAGGTGTATTACGAATTCAATCCCGATCTTCATGGCTCGCAGAACCGTTGATGCTGATATCANCCCGTGTTCCTGTTCTTTGTAGCCTGCATTGCTTATCTTCACATGGATCTTTCCATTGGGAAATCATAGGCTCCTTGAAATATTTAGAGGCGCTCTCCGCACTTGCCCTTCTAATTATCACAGTTGAATCAAGGCTGCCTTTTGTGTTAGTTTGTACGGTTCCCGTGGGGGAGAAGATGGTCTTTTTGTAGAAC GTTGTCGTTGTAGGAATGGGAT GATGAGGATGACTTTATATAAGTATCCATACTTGATTGAaaaaaaa ]
consensusID : consensus_14148#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 683 fasta sequence
[ATATCCCATCAGCGGTGGTTCCAGGGGGNAGTTCGCAAACTGACAGTGATAAGGCTTGCAGGACTTTGTGCCGAATGAAAAGACGCGCGCGGCTCGTAGGTCTTACCTCGGAGCGCCTTTGTGGATCCGGCGGTAAAGATTGTACCACTCAAACTCGTGCCTCGTGAGGGATCGACAAGTGCGCAAGCGGTAGTTCCTTTCGTGGCGGAGCAATATCTTAGACTGAGTTATTCATACCTTGATGTTGTTGAAAGGACGACAGTTGTACTAAAGAAGAGAAACGTAGTTGGAGAGCACAATGTTCCTTTCCAGGTGTATTACGAATTCAATCCGATCTTCATGCTCGCAGAACCGTTGATGCTGATATCAGCCGTGTTCCTGTTCTTTGTAGCCTGCATTGCTTATCTTCACATGGATCTTTCCATTGGGAAATCATAGGCTCCTTGAAATATTTAGAGGCGCTCTCCGCACTTGCCCTTCTAATTATCACAGTTGAATCAAGGCTGCCTTTTGTGTTAGTTTGTACGGTTCCCGTGGGGGAGAAGATGGTCTTTTTGTGGAACGTTGTCGTTGTAGAAATGGGATGATGAGGATGACTTTATATAAGTATCCATACTTGATTGATCTGCTCACTTAACTACGTTACGTACCGCTTTGTTCCTAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CA762128 [ATATCCCATCAGCGGTGGTTCCAGGGGGNAGTTCGCAAACTGACAGTGATAAGGCTTGCAGGACTTTGTGCCGAATGAAAAGACGCGCGCGGCTCGTAGGTCTTACCTCGGAGCGCCTTTGTGGATCCGGCGGTAAAGATTGTACCACTCAAACTCGTGCCTCGTGAGGGATCGACAAGTGCGCAAGCGGTAGTTCCTTTCGTGGCGGAGCAATATCTTAGACTGAGTTATTCATACCTTGATGTTGTTGAAAGGACGACAGTTGTACTAAAGAAGAGAAACGTAGTTGGAGAGCACAATGTTCCTTTCCAGGTGTATTACGAATTCAATCCGATCTTCATGCTCGCAGAACCGTTGATGCTGATATCAGCCGTGTTCCTGTTCTTTGTAGCCTGCATTGCTTATCTTCACATGGATCTTTCCATTGGGAAATCATAGGCTCCTTGAAATATTTAGAGGCGCTCTCCGCACTTGCCCTTCTAATTATCACAGTTGAATCAAGGCTGCCTTTTGTGTTAGTTTGTACGGTTCCCGTGGGGGAGAAGATGGTCTTTTTGTGGAACGTTGTCGTTGTAGAAATGGGATGATGAGGATGACTTTATATAAGTATCCATACTTGATTGATCTGCTCACTTAACTACGTTACGTACCGCTTTGTTCCTAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_14148#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 431 fasta sequence
[AAGGGGCCGATTTNTCATTGGGGGAATGTTCAAATTACTGAGCAGTATAAGCTGNAACATGGTGGTNCTCAGCACAANGGAGTCTTTTCAAGGCTTGAGTATCAATCCAGGCCTTACTATAAGTGGNNGTNTCATCATTTAAGCCNTACTTACTTNTCAAGGTTGCGCTCCCCNGGGTTTCACGTTCAGTGATAACTATCGTGNATGCAGAATCGGTCAACATTATGCTTAGATCCCATATTGCNNTGAGTGATTTCGGCAACATNNTTNAGANCTTGCAAATTGCAGCCCNGATATCCNTCANTTTGCNTGGTNTGNCACNCTANGTNCCNNCNTTGGNCNAANGGTTTCCCCCATTGCAAGANNTNACTGCNATTGAATCTAGATTGGTGCTNCGACGCTACAAGACAAGNCCGTANCTTNTNGAGATG]
[+] EMBL AA751490 [AAGGGGCCGATTTNTCATTGGGGGAATGTTCAAATTACTGAGCAGTATAAGCTGNAACATGGTGGTNCTCAGCACAANGGAGTCTTTTCAAGGCTTGAGTATCAATCCAGGCCTTACTATAAGTGGNNGTNTCATCATTTAAGCCNTACTTACTTNTCAAGGTTGCGCTCCCCNGGGTTTCACGTTCAGTGATAACTATCGTGNATGCAGAATCGGTCAACATTATGCTTAGATCCCATATTGCNNTGAGTGATTTCGGCAACATNNTTNAGANCTTGCAAATTGCAGCCCNGATATCCNTCANTTTGCNTGGTNTGNCACNCTANGTNCCNNCNTTGGNCNAANGGTTTCCCCCATTGCAAGANNTNACTGCNATTGAATCTAGATTGGTGCTNCGACGCTACAAGACAAGNCCGTANCTTNTNGAGATG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14148#0 AGAGCCTTAAGAGGCGGGTGAGAGGCGGAGGAGAGGAGACTAGAGAGATCTGAGCTCTGG 60
consensus_14148#1 ------------------------------------------------------------
consensus_14148#2 ------------------------------------------------------------
consensus_14148#0 TCAGCCGAGCCAAGCCTGCCGGTCGCCGGAGGAGGCAACGACGACCATGATGGCGCCGTC 120
consensus_14148#1 ------------------------------------------------------------
consensus_14148#2 ------------------------------------------------------------
consensus_14148#0 CTTGTCCACCGCCGTCTCCTCTCTTCTCCTCCTCCTCCTCCTAGCCGCTGCTATCTCCGT 180
consensus_14148#1 ------------------------------------------------------------
consensus_14148#2 ------------------------------------------------------------
consensus_14148#0 CTCCTCCTCACCGCCGATGCCGGAGGACAGCATCCGGGTCATCTCCGCCGAGAAAAGGAT 240
consensus_14148#1 ------------------------------------------------------------
consensus_14148#2 ------------------------------------------------------------
consensus_14148#0 CGACCTCACCAGCCCCATAGTCAAAGTTTTCCTCACACTAAAGCTCGAGAATGATGCCAC 300
consensus_14148#1 ------------------------------------------------------------
consensus_14148#2 ------------------------------------------------------------
consensus_14148#0 TGCCCCTGAAGCATCTCAAGTTCTACTCGCATTCACACCCACAGAGGTTGAACATCTTGC 360
consensus_14148#1 ------------------------------------------------------------
consensus_14148#2 ------------------------------------------------------------
consensus_14148#0 GATTGTCAAGGCGACCAGAGCGGAGGGGAAGCGCAAGAAGAAGATATATGTGCCTCTCTC 420
consensus_14148#1 ------------------------------------------------------------
consensus_14148#2 ------------------------------------------------------------
consensus_14148#0 TGTGAAAGCCTCTGATCTTGCTGCCGCTCCAAATGGTGCTCGCCTGTACTCCATTTTGCT 480
consensus_14148#1 ------------------------------------------------------------
consensus_14148#2 ------------------------------------------------------------
consensus_14148#0 GAGCACTCCATTGAAACCTGCTGAGGTGACGACGCTGGAAGTATTTTATGCTTTGACACA 540
consensus_14148#1 ------------------------------------------------------------
consensus_14148#2 ------------------------------------------------------------
consensus_14148#0 CTCTTTGGAGCCCTTCCCAGCAGAGATCACCCAGTCAGATCCCCAGCTGGTTTACTACCG 600
consensus_14148#1 ------------------------------------------------------------
consensus_14148#2 ------------------------------------------------------------
consensus_14148#0 TGACAGTGCTGTGCTTCTATCTCCGTACCATGTTCTGGAGCAGGTTACCTACATCAAAAT 660
consensus_14148#1 ------------------------------------------------------------
consensus_14148#2 ------------------------------------------------------------
consensus_14148#0 GCCGAGCAATAGGGTGGAGTCCTTTACAAGGGTGGACCCCACCAGTCGAGCTGGTAATGA 720
consensus_14148#1 ------------------------------------------------------------
consensus_14148#2 ------------------------------------------------------------
consensus_14148#0 AGTGAAATACGGCGCATACAACAACCAGCTTCCAAACTCGTATGTGCCCATACTTGTGCA 780
consensus_14148#1 ------------------------------------------------------------
consensus_14148#2 ------------------------------------------------------------
consensus_14148#0 TTATGAAAATAATCGTCCGTTTGCTGTTGTTGAGGAATTTGTGCGCAAGGTGGAGATTTC 840
consensus_14148#1 ------------------------------------------------------------
consensus_14148#2 ------------------------------------------------------------
consensus_14148#0 TCATTGGGGGAATGTCCAAATCACTGAGCAGTATAAGCTGAAACATGGTGGTGCTCAGCA 900
consensus_14148#1 ------------------------------------------------------------
consensus_14148#2 ------------------------------------------------------------
consensus_14148#0 CAAAGGAGTCTTTTCAAGGCTTGAGTATCAATCCAGGCCTTCTATAAGTGGAGTGTCATC 960
consensus_14148#1 ------------------------------------------------------------
consensus_14148#2 ------------------------------------------------------------
consensus_14148#0 ATTTAAGAATCTTCTTGCAAGGTTGCCTCCTCGAGTTCATTCAGTATACTATCGTGATGA 1020
consensus_14148#1 ------------------------------------------------------------
consensus_14148#2 ------------------------------------------------------------
consensus_14148#0 GATCGGCAACATATCTTCATCCCATTTGCGTAGTGATTCGCACAAGTCAGAACTTGAAAT 1080
consensus_14148#1 ------------------------------------------------------------
consensus_14148#2 ------------------------------------------------------------
consensus_14148#0 TGAGCCCAGATATCCATTATTTGGTGGTTGGCACTGCACGTTCACCA-TTGGCTATGGTT 1139
consensus_14148#1 ---------ATATCCCATCAGCGGTGGTTCCAGGGGGNAGTTCGCAAACTGACAGTGATA 51
consensus_14148#2 ------------------------------------------------------------
consensus_14148#0 TGCCATTGCAAGATTTTCTCTTTGAATCAGATGATGGTCGACGCTACATAAATCTTACTT 1199
consensus_14148#1 AGGC-TTGCAGGACTTTGTGCC-GAATGAAAAGACGCGCGCGGCT-CGTAGGTCTTACCT 108
consensus_14148#2 ------------------------------------------------------------
consensus_14148#0 TTGGATGCCCTCTGTTGGATACGGTGGTAGATGATCTTACCA-TCAAAGTCGTGCTTCCT 1258
consensus_14148#1 CGGAGCGCCTTT--GTGGATCCGGCGGTAAA-GATTGTACCACTCAAACTCGTGCCTCGT 165
consensus_14148#2 -----------------AAGGGGCCGATTTNTCATTGGGGGA---ATGTTCAAATTAC-T 39
* * * * ** * * ** * *
consensus_14148#0 GAGGGATCGACAAGTCCACAAGCTGTAGTTCCTTTCCTGACGGAACAATATCTTGAGACT 1318
consensus_14148#1 GAGGGATCGACAAGTGCGCAAGCGGTAGTTCCTTTCGTGGCGGAGCAATATCTTAGACTG 225
consensus_14148#2 GAGCAGT--ATAAGCTGNAACATGGTGGTNCTCAGCACAANGGAGTCTTTTCAAGGCTTG 97
*** * * *** * ** ** * * *** * **
consensus_14148#0 AGTTATTCATACCTTGATGTTGTTGGAAGGACGACAGTTGTACTAAAGAAGAGAAACGTA 1378
consensus_14148#1 AGTTATTCATACCTTGATGTTGTTGAAAGGACGACAGTTGTACTAAAGAAGAGAAACGTA 285
consensus_14148#2 AGT--ATCA-ATCCAGGCCTTACTATAAG--TGGNNGTNTCATCATTTAAGCCNTACTTA 152
*** *** * * * ** * *** * ** * * *** ** **
consensus_14148#0 GTTGGAGAGCACAATGTTCCTTTCCAGGTGTATTACGAATTCAATCCGATCT-TCATGCT 1437
consensus_14148#1 GTTGGAGAGCACAATGTTCCTTTCCAGGTGTATTACGAATTCAATCCGATCT-TCATGCT 344
consensus_14148#2 CTTNT----CAAGGTTGCGCTCCCCNGG-GTTTCACG--TTCAGTGATAACTATCGTGNA 205
** ** * ** ** ** ** * *** **** * * ** ** **
consensus_14148#0 CGCAGAACCGTTGATGCTGATATCAGCCGTGTTCCTGTTCTTTGTAGCCTGCATTGCTTA 1497
consensus_14148#1 CGCAGAACCGTTGATGCTGATATCAGCCGTGTTCCTGTTCTTTGTAGCCTGCATTGCTTA 404
consensus_14148#2 TGCAGAATCG-----GTCAACATTA----TGCTTAGATCCCATATTGCNNTGAGTGATTT 256
****** ** * * ** * ** * * * * * ** * ** **
consensus_14148#0 TCTTCACATGGATCTTTCCATTGGGAAATCATAGGCTCCTTGAAATATTTAGAGGCGCTC 1557
consensus_14148#1 TCTTCACATGGATCTTTCCATTGGGAAATCATAGGCTCCTTGAAATATTTAGAGGCGCTC 464
consensus_14148#2 CGGCAACATNN--TTNAGANCTTGCAAATTGCAG---CCCNGATATCCNTCA----NTTT 307
**** * * * **** ** ** ** ** * *
consensus_14148#0 TCCGCACTTGCCCTTCTAATTATCACAGTTGAATCAAGGCTGCCTTTTGTGTTAGTTTGT 1617
consensus_14148#1 TCCGCACTTGCCCTTCTAATTATCACAGTTGAATCAAGGCTGCCTTTTGTGTTAGTTTGT 524
consensus_14148#2 GCNTGGTNTGNCACNCTANGTNCCNNCNTTGGNCNAANGGTTTCCCCCAT-------TGC 360
* ** * *** * * *** ** * * * * **
consensus_14148#0 ACGGTTCCCGTGGGGGAGAAGATGGTCTTTTTGTAGAACGTTGTCGTTGTAGGAATGGGA 1677
consensus_14148#1 ACGGTTCCCGTGGGGGAGAAGATGGTCTTTTTGTGGAACGTTGTCGTTGTAGAAATGGGA 584
consensus_14148#2 AAGANNTNACTGCNATTGAATCTAGATTGGTGCTNCGACGCTACAAGACAAGNCCGTANC 420
* * ** *** * * * * * *** * **
consensus_14148#0 TGATGAGGATGACTTTATATAAGTATCCATACTTGATTGATCTGCTCACTTAACTACGTT 1737
consensus_14148#1 TGATGAGGATGACTTTATATAAGTATCCATACTTGATTGATCTGCTCACTTAACTACGTT 644
consensus_14148#2 TTNTNGAGATG------------------------------------------------- 431
* * ****
consensus_14148#0 ACGTACCGCTTTGTTCCTAACTGTGGTATTAGCTGTTGCACTCACATAAGTGCTCACTTT 1797
consensus_14148#1 ACGTACCGCTTTGTTCCTAAAAAAAAAAAAAAAAAAAAA--------------------- 683
consensus_14148#2 ------------------------------------------------------------
consensus_14148#0 TGTGGAGAGGGAGACTTGAAGAATTGCGCCAGAATCATTGTGGCCT 1843
consensus_14148#1 ----------------------------------------------
consensus_14148#2 ----------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||