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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1418 cluster # 1418       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1418#0 length = 723 sequences # 2  

consensusID : consensus_1418#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 723
fasta sequence
                              [GCAATCCCACGGCCGCCGCCGCCGCCGCCGCCTGTCCGCCATGGCAGGGAAGCTTATTGCAAACTTGATTGTCATGGGCTCTGGGATTATAGGAAGAGCTATGCTCCAAGCATACCGGAAAGCACTTGATAATGCAAATAAAACTGGTGTGGCCCATGAAACAATTAATAACATTCGTAGAGCCAGCAAAACAATGACTGAGCAAGAAGCTAGGCAGATACTCGGTGTATCTGAGCAGTCAACTTGGGAAGAGATTGCACAGCGCTATGATAATTTATTTGAAAGAAATGCAAAATCTGGGAGCTTTTATCTTCAGTCGAAGGTCCACCGAGCAAAGGAATGCCTAGAGAATGTGTACCAAAAGAATAAGCAAGATGGAACACCACCTTGAAATTTGCAGTCCTTGAAAAATCATCTTTTCAGATATATTCTTTCCCACTCATAAGAGAAGTGTACATACCAGAATTGGTCGCTGCTGTTGTATCATTACACGTAGTGGA-ATCAATAAGAATCAAAGTGCAGCGAGA-CTTTGGAATTGTGGAAAACTGTTTTATGAGGTTTCAATAAACTCTAGCATGAAGTACGATTTT-GTTCTTTTGATTTGACCTTAGGAAACAATGCAAATTTTGTCATCTTGGTGGCTGCTAGTTAGGTTTAAACATTTGAACATGTACTGTCCCTCATCAAAGTTTGGCATTGCAGTTAGGCTGCCAGATGGACCAA]

[+] EMBL AK063255             [GCAATCCCACGGCCGCCGCCGCCGCCGCCGCCTGTCCGCCATGGCAGGGAAGCTTATTGCAAACTTGATTGTCATGGGCTCTGGGATTATAGGAAGAGCTATGCTCCAAGCATACCGGAAAGCACTTGATAATGCAAATAAAACTGGTGTGGCCCATGAAACAATTAATAACATTCGTAGAGCCAGCAAAACAATGACTGAGCAAGAAGCTAGGCAGATACTCGGTGTATCTGAGCAGTCAACTTGGGAAGAGATTGCACAGCGCTATGATAATTTATTTGAAAGAAATGCAAAATCTGGGAGCTTTTATCTTCAGTCGAAGGTCCACCGAGCAAAGGAATGCCTAGAGAATGTGTACCAAAAGAATAAGCAAGATGGAACACCACCTTGAAATTTGCAGTCCTTGAAAAATCATCTTTTCAGATATATTCTTTCCCACTCATAAGAGAAGTGTACATACCAGAATTGGTCGCTGCTGTTGTATCATTACACGTAGTGGA ATCAATAAGAATCAAAGTGCAGCGAGA CTTTGGAATTGTGGAAAACTGTTTTATGAGGTTTCAATAAACTCTAGCATGAAGTACGATTTT GTTCTTTTGATTTGACCTTAGGAAACAATGCAAATTTTGTCATCTTGGTGGCTGCTAGTTAGGTTTAAACATTTGAACATGTACTGTCCCTCATCAAAGTTTGGCATTGCAGTTAGGCTGCCAGATGGACCAA]
[+] EMBL C28176               [                                                                                                                                                                                                                GCTAGGCAGATACTCGGTGTATCTGAGCAGTCAACTTGGGAAGAGATTGCACAGCGCTATGATAATTTATTTGAAAGAAATGCAAAATCTGGGAGCTTTTATCTTCAGTCGAAGGTCCACCGAGCAAAGGAATGCCTAGAGAATGTGTACCAAAAGAATAAGCAAGATGGAACACCACCTTGAAATTTGCAGTCCTTGAAAAATCATCTTTTCAGATATATTCTTTCCCACTCATAAGAGAAGTGTACATACCAGAATTGGTCGCTGCTGTTGTATCATTACACGTAG GGANATCAATAAGAATCAAAGTGCAGCGAGACCTTGGGAATTGTGGNAAACTGTTTTATGAGGTTTCAATAAACTCTAGCATGANGTACGGTTTTGGTCCTTTTGANTTGACCTT GGGNACAATGCAAATTTTGTCATCTTGGTGG                                                                                  ]


>consensus_1418#0 GCAATCCCACGGCCGCCGCCGCCGCCGCCGCCTGTCCGCCATGGCAGGGAAGCTTATTGC AAACTTGATTGTCATGGGCTCTGGGATTATAGGAAGAGCTATGCTCCAAGCATACCGGAA AGCACTTGATAATGCAAATAAAACTGGTGTGGCCCATGAAACAATTAATAACATTCGTAG AGCCAGCAAAACAATGACTGAGCAAGAAGCTAGGCAGATACTCGGTGTATCTGAGCAGTC AACTTGGGAAGAGATTGCACAGCGCTATGATAATTTATTTGAAAGAAATGCAAAATCTGG GAGCTTTTATCTTCAGTCGAAGGTCCACCGAGCAAAGGAATGCCTAGAGAATGTGTACCA AAAGAATAAGCAAGATGGAACACCACCTTGAAATTTGCAGTCCTTGAAAAATCATCTTTT CAGATATATTCTTTCCCACTCATAAGAGAAGTGTACATACCAGAATTGGTCGCTGCTGTT GTATCATTACACGTAGTGGAATCAATAAGAATCAAAGTGCAGCGAGACTTTGGAATTGTG GAAAACTGTTTTATGAGGTTTCAATAAACTCTAGCATGAAGTACGATTTTGTTCTTTTGA TTTGACCTTAGGAAACAATGCAAATTTTGTCATCTTGGTGGCTGCTAGTTAGGTTTAAAC ATTTGAACATGTACTGTCCCTCATCAAAGTTTGGCATTGCAGTTAGGCTGCCAGATGGAC CAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)