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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14187#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1771 fasta sequence
[GTGAAAAAAAAAAAAAGCAAAAGCGGCGACGCCACACTAGCCAGCGGCGGAGGCGGTGGAGAGGAGAGGAGAGGGGAGAGGGGGGAAGCAAAGCGCGAGCGGCGATGGCGGCGAGGAGGAGCAGGGTGGCGTTCGTGCTGGTGGACGGGATCGGGGACGTGAGCATCCCGTCGCTCCGGGGGCGGACGCCGCTGGAGGCGGCGGCGGCGCCGGGGCTGGACGCGGTGGCGGCGGCCGGGGTGGCGGGGCTCATGGACCCCGTCGAGCCGGGGCTCGCCTGCGGGAGCGACACGGCGCACCTCTCCCTCCTCGGGTACGACCCCCGCGTGTACTACCGCGGCCGCGGCGCGTTCGAGTCCATGGGCGCCGGCCTCGCCATGGCCCCCGGCGACATCGCCTTCAAGTCAAACTTTGCTACGTTGGATGAAAGCACGGGGATCATTGTCAGCAGAAGGGCGGATCGACACTTTGAGGAGGAAGGCCCGATACTCTGTGCTGCATTGGATGGGTTGAAGCTCCCATCGTTTCCTGAATATGAAGTGAGAGTCAGATATGCTACTGAACACAGGTGTGGTGTGGTTGTGAAAGGACCGAGGCTGAGTGGGAACATTTCTGGAACTGATCCATTGAAGGACAACCGCTTGCATCTAAAGGCTGAACCTTTGGATGATTCAGAAGAAGCTAAAAACACGGCAGCTGTGGTCAATGAGCTTTCTAAGGAGATTACACGTATACTGGTGTCCCATCCTATCAATGCACAGCGCTCTGCCGAGGGGAAGAACATTGCAAATGTTGTGTTATTGCGAGGCTGTGGTATCCGG-ATTGAGGTTCCTGCCTTCGAAACCAAGCATGGACTTGCACCATGCATGGTGGCTCCTACAAAGATCATAGCTGGGCT-GGGGCTCTCACTGGGCATT-GATATCCTTGAAGCACCTGGAGCAACT-GGAGACTATCGAACTCTCTTGACTTCCAAAGCTAAAGCTATAGCCAAGGCACTG-TCTGCTCCTCTGGATACGCCACCTCGTGTTTTTGTGCCTGG-AGAGGATGAATATAAATCTGGAAAGGAAAATGGATATGACTTTGGGTTCTTGCACATAAAGGCCATCGATGATGCCGGTCATGATAAGGCTGTCAAGCTTAAGGTACTAGGCCTAGAGGCTGTTGATCGGGCTATCGTTCAGCTTGCAAGGCTCCTGTGGGAAGCTGAAAAGTCTGGGAAATACCAGTATTTCCTTTGTGTCACCGGAGACCACTCTACTCCAGTTGAGTACGGTGACCACAGTTTTGAACCCGTTCCTTTTGTGTTGTGCCGACTTAGAGATTTCGTAGGAGCTATGGGGGAGGACAATGTTATCAACTTCCCCCTGGACGATTTCCTGCTT-CCTTCAGTTAAATCTGGAGAAGATGTGGCAGAAAACATAGATGTAGCTGATCGCAAGTCTGATCAGCGCAAAGCTTTCAGTGGCGATTCTGTCTTTGAATTC-AACGAGATTGCCGCTGCAAGGGGCTG-CCTTGGACGTTTCCCTGGAAGTGAGATGATGGGCATCATCAAGAAGTTCATCAAAGCGAAGAACGATTAGTGCCAGTTCAACATACTGACGTTTGTGTAATCTGTTGACCTTGAGGCTTCCATGTCTGTAATAATTGCAAACAAGGATGTATTCAGAGAACCAGCTCAGTCTGAGATGAATAAGGCTTCTCATGGATCTTGAATCTTGCACTGAAAAGCATAAATAATCTGACCTGCTGTGTACATTTACCAAAAAAAAAA]
[+] EMBL AK102566 [GTGAAAAAAAAAAAAAGCAAAAGCGGCGACGCCACACTAGCCAGCGGCGGAGGCGGTGGAGAGGAGAGGAGAGGGGAGAGGGGGGAAGCAAAGCGCGAGCGGCGATGGCGGCGAGGAGGAGCAGGGTGGCGTTCGTGCTGGTGGACGGGATCGGGGACGTGAGCATCCCGTCGCTCCGGGGGCGGACGCCGCTGGAGGCGGCGGCGGCGCCGGGGCTGGACGCGGTGGCGGCGGCCGGGGTGGCGGGGCTCATGGACCCCGTCGAGCCGGGGCTCGCCTGCGGGAGCGACACGGCGCACCTCTCCCTCCTCGGGTACGACCCCCGCGTGTACTACCGCGGCCGCGGCGCGTTCGAGTCCATGGGCGCCGGCCTCGCCATGGCCCCCGGCGACATCGCCTTCAAGTCAAACTTTGCTACGTTGGATGAAAGCACGGGGATCATTGTCAGCAGAAGGGCGGATCGACACTTTGAGGAGGAAGGCCCGATACTCTGTGCTGCATTGGATGGGTTGAAGCTCCCATCGTTTCCTGAATATGAAGTGAGAGTCAGATATGCTACTGAACACAGGTGTGGTGTGGTTGTGAAAGGACCGAGGCTGAGTGGGAACATTTCTGGAACTGATCCATTGAAGGACAACCGCTTGCATCTAAAGGCTGAACCTTTGGATGATTCAGAAGAAGCTAAAAACACGGCAGCTGTGGTCAATGAGCTTTCTAAGGAGATTACACGTATACTGGTGTCCCATCCTATCAATGCACAGCGCTCTGCCGAGGGGAAGAACATTGCAAATGTTGTGTTATTGCGAGGCTGTGGTATCCGG ATTGAGGTTCCTGCCTTCGAAACCAAGCATGGACTTGCACCATGCATGGTGGCTCCTACAAAGATCATAGCTGGGCT GGGGCTCTCACTGGGCATT GATATCCTTGAAGCACCTGGAGCAACT GGAGACTATCGAACTCTCTTGACTTCCAAAGCTAAAGCTATAGCCAAGGCACTG TCTGCTCCTCTGGATACGCCACCTCGTGTTTTTGTGCCTGG AGAGGATGAATATAAATCTGGAAAGGAAAATGGATATGACTTTGGGTTCTTGCACATAAAGGCCATCGATGATGCCGGTCATGATAAGGCTGTCAAGCTTAAGGTACTAGGCCTAGAGGCTGTTGATCGGGCTATCGTTCAGCTTGCAAGGCTCCTGTGGGAAGCTGAAAAGTCTGGGAAATACCAGTATTTCCTTTGTGTCACCGGAGACCACTCTACTCCAGTTGAGTACGGTGACCACAGTTTTGAACCCGTTCCTTTTGTGTTGTGCCGACTTAGAGATTTCGTAGGAGCTATGGGGGAGGACAATGTTATCAACTTCCCCCTGGACGATTTCCTGCTT CCTTCAGTTAAATCTGGAGAAGATGTGGCAGAAAACATAGATGTAGCTGATCGCAAGTCTGATCAGCGCAAAGCTTTCAGTGGCGATTCTGTCTTTGAATTC AACGAGATTGCCGCTGCAAGGGGCTG CCTTGGACGTTTCCCTGGAAGTGAGATGATGGGCATCATCAAGAAGTTCATCAAAGCGAAGAACGATTAGTGCCAGTTCAACATACTGACGTTTGTGTAATCTGTTGACCTTGAGGCTTCCATGTCTGTAATAATTGCAAACAAGGATGTATTCAGAGAACCAGCTCAGTCTGAGATGAATAAGGCTTCTCATGGATCTTGAATCTTGCACTGAAAAGCATAAATAATCTGACCTGCTGTG ]
[+] EMBL CB645766 [ TGGCGCCTTTGAGGAGCAGGGTGGCGTTCGTGCTGGTGGACGGGATCGGGGACGTGAGCATCCCGTCGCTCCGGGGGCGGACGCCGCTGGAGGCGGCGGCGGCGCCGGGGCTGGACGCGGTGGCGGCGGCCGGGGTGGCGGGGCTCATGGACCCCGTCGAGCCGGGGCTCGCCTGCGGGAGCGACACGGCGCACCTCTCCCTCCTCGGGTACGACCCCCGCGTGTACTACCGCGGCCGCGGCGCGTTCGAGTCCATGGGCGCCGGCCTCGCCATGGCCCCCGGCGACATCGCCTTCAAGTCAAACTTTGCTACGTTGGATGAAAGCACGGGGATCATTGTCAGCAGAAGGGCGGATCGACACTTTGAGGAGGAAGGCCCGATACTCTGTGCTGCATTGGATGGGTTGAAGCTCCCATCGTTTCCTGAATATGAAGTGAGAGTCAGATATGCTACTGAACACAGGTGTGGTGTGGTTGTGAAAGGACCGAGGCTGAGTGGGAACATTTCTGGAACTGATCCATTGAAGGACAACCGCTTGCATCTAAAGGCTGAACCTTTGGATGATTCAGAAGAAGCTAAAAACACGGCAGCTGTGGTCAATGAGCTTTCTAAGGAGATTACACGTATACTGGTGTCCCATCCTATCAATGCACAGCGCTCTGCCGAGGGGAAGAACATTGCAAATGTTGTGTTATTGCGAGGCTGTGGTATCCGG ATTGAGGTTCCTGCCTTCGAAACCAAGCATGGACTTGCACCATGCATGGTGGCTCCTACAAAGATCATAGCTGG ]
[+] EMBL AU181136 [ CGAGTCCATGGGCGCCGGCCTCGCCATGGCCCCCGGCGACATCG CTTCAAGTCAAACTTTGCTACGTTGGATGAAAGCACGGGGATCATTGTCAGCAGAAGGGCGGATCGACACTTTNAGGANGAAGGCCCGATACTCTGTGCTGCATTGGATGGGTTGAAGCTCCCATCGTTTCCTGAATATGAAGTGAGAGTCAGATATGCTACTGAACACAGGTGTGGTGTGGTTGTGAAAGGACCGAGGCTGAGTGGGAACATTTCTGGAACTGATCCATTGAAGGACAACCGCTTGCATCTAAAGGCTGAACCTTTGGATGATTCAGAAGAAGCTAAAAACACGGCAGCTGTGGTCAATGAGCTTTCTAAGGAGATTACACGTATACTGGTGTCCCATCCTATCAATGCACAGCGCTCTGCCGAGGGGAAGAACATTGCAAATGTTGTG ]
[+] EMBL AU093439 [ GAGTCCATGGGCGCCGGCCTCGCCATGGCCCCCGGCGACATCGCCTTCAAGTCAAACTTTGCTACGTTGGATGAAAGCACGGGGATCATTGTCAGCAGAAGGGCGGATCGACACTTTGAGGAGGAAGGCCCGATACTCTGTGCTGCATTGGATGGGTTGAAGCTCCCATCGTTTCCTGAATATGAAGTGAGAGTCAGATATGCTACTGAACACAGGTGTGGTGTGGTTGTGAAAGGACCGAGGCTGAGTGGGAACATTTCTGGAACTGATCCATTGAAGGACAACCGCTTGCATCTAAAGGCTGAACCTTTGGATGATTCAGAAGAAGCTAAAAACACGGCAGCTGTGGTCAATGAGCTTTCTAAGGAGATTACACGTATACTGGTGTCCCATCCTATCAATGCACAGCGCTCTGCCGAGGGGAAGAACATTGCAAATGTTGTGTTATTGCGAGGCTGTGGTATCCGGNATTGAGGTTCCTGCCTTCGAAACCAAGCATGGACTTGCACCATGCATGGTGGCTCCTACAAAGATCATAGCTGGGCT GGGGCTCTCACTGGGCATTNGATA ]
[-] EMBL AU092472 [ AGTCCATGGGCGCCGGCCTCGCCATGGCCCCCGGCGACATCGCCTTCAAGTCAAACTTTGCTACGTTGGATGAAAGCACGGGGATCATTGTCAGCAGAAGGGCGGATCGACACTTTGAGGAGGAAGGCCCGATACTCTGTGCTGCATTGGATGGGTTGAAGCTCCCATCGTTTCCTGAATATGAAGTGAGAGTCAGATATGCTACTGAACACAGGTGTGGTGTGGTTGTGAAAGGACCGAGGCTGAGTGGGAACATTTCTGGAACTGATCCATTGAAGGACAACCGCTTGCATCTAAAGGCTGAACCTTTGGATGATTCAGAAGAAGCTAAAAACACGGCAGCTGTGGTCAATGAGCTTTCTAAGGAGATTACACGTATACTGGTGTCCCATCCTATCAATGCACAGCGCTCTGCCGAGGGGAAGAACATTGCAAATGTTGTGTTATTGCGAGGCTGTGGTATCCGG ATTGAGGTTCCTGCCTTCGAAACCAAGCATGGACTTGCACCATGCATGGTGGCTCCTACAAAGATCATAGCTGGGCTGGGGGCTCTCACTGGGCCAT GATATCC TGAAGCACCTGGAGCAACTGGGAGACTATCGAACTCTCTTGACTTCCAAAGCTAAAGCTATAGCCAAGGCACTGTTCTGCTCCTCTGGATACGCCA CTCGTGTTTTTGTGCCTGGAAGAGG ]
[-] EMBL CB645767 [ CAACT GGAGACTATCGAACTCTCTTGACTTCCAAAGCTAAAGCTATAGCCAAGGCACTG TCTGCTCCTCTGGATACGCCACCTCGTGTTTTTGTGCCTGG AGAGGATGAATATAAATCTGGAAAGGAAAATGGATATGACTTTGGGTTCTTGCACATAAAGGCCATCGATGATGCCGGTCATGATAAGGCTGTCAAGCTTAAGGTACTAGGCCTAGAGGCTGTTGATCGGGCTATCGTTCAGCTTGCAAGGCTCCTGTGGGAAGCTGAAAAGTCTGGGAAATACCAGTATTTCCTTTGTGTCACCGGAGACCACTCTACTCCAGTTGAGTACGGTGACCACAGTTTTGAACCCGTTCCTTTTGTGTTGTGCCGACTTAGAGATTTCGTAGGAGCTATGGGGGAGGACAATGTTATCAACTTCCCCCTGGACGATTTCCTGCTT CCTTCAGTTAAATCTGGAGAAGATGTGGCAGAAAACATAGATGTAGCTGATCGCAAGTCTGATCAGCGCAAAGCTTTCAGTGGCGATTCTGTCTTTGAATTC AACGAGATTGCCGCTGCAAGGGGCTG CCTTGGACGTTTCCCTGGAAGTGAGATGATGGGCATCATCAAGAAGTTCATCAAAGCGAAGAACGATTAGTGCCAGTTCAACATACTGACGTTTGTGTAATCTGTTGACCTTGAGGCTTCCATGTCTGTAATAATTGCAAACAAGGATGTATTCAGAGAACCAGCTCAGTCTGAGATGAATAAGGCTTCTCATGGATCTTGAATCTTGCAAAAAAAAagg ]
[-] EMBL AU092471 [ TTCGTAGGAGCTTTGGGGGAGGAC ATGTTATCAACTT CCCCTGGACGATTTCNGCCTT CCTTCAGTTAAATCTGGAGAAGATNTGGCAGAANACATAGATGTAGCTGATCGCAAGTCTGATCAGCGCAAAGCTTTCAGTGGCGATTCTGTCTTTGAATTC AACGAGATTGCCGCTGCAAGGGGCTGCCCTTGGACGTTTCCCTGGAAGTGAGATGATGGGCATCATCAAGAAGTTCATCAAAGCGAAGAACGATTAGTGCCAGTTCAACATACTGACGTTTGTGTAATCTGTTGACCTTGAGGCTTCCATGTCTGTAATAATTGCAAACAAGGATGTATTCAGAGAACCAGCTCAGTCTGAGATGAATAAGGCTTCTCATGG ]
[+] EMBL AU033079 [ TGCTTCCCTTCAGTTAAACCTGGAGAAGATGTGGCAGAAAACATAGATGTAGCTGATCGCAAGTCTGATCAGCGCAAAGCTTTCAGTGGCGATTCTGNCTTTGAATTC AACGAGANTGCCGCTGCAAGGGGCTG CCTTGGACGTTTCCCTGGAAGTGAGATGATGGGCATCATCAAGAAGTTCATCAAAGCGAAGAACGATTAGTGCCAGTTCAACATACTGACGTTTGTGTAATCTGTTGACCTTGAGGCTTCCATGTCTGTAATAATTGCAAACAAGGATGTATTCAGAGAACCAGCTCAGTCTGAGATNAATAAGGCTTCTCATGGATCTTGAANCTTGCACTGAAAAGCATAAATAATCTGACCTGCTGTGTACATTTACCAAAAA ]
[+] EMBL AU181135 [ ATGTGGCAGAAAACATAGATGTAGCTGATCGCAAGTCTGATCAGCGCAAAGCTTTCAGTGGCGATTCTGTCTTTGAANTC AACGAGATTGCCGCTGCAAGGGGCTG CCTTGGACGTTTCCCTGGAAGTGAGATGATGGGCATCATCAAGAAGTTCATCAAAGCGAAGAACGATTAGTGCCAGTTCAACATACTGACGTTTGTGTAATCTGTTGACCTTGAGGCTTCCATGTCTGTAATAATTGCAAACAAGGATGTATTCAGAGAACCAGCTCAGTCTGAGATGAATAAGGCTTCTCATGGANCTTGAANCTTGCACTGAAAAGCATAAATAATCTGACCTGCTGTGTACATTTACCAAAAA ]
[+] EMBL OSC6341 [ ATGTGGCAGAAAACATAGATGTAGCTGACCGCAAGTCTGATCAGCGCAAAGCTTTCAGTGGCGANTCTGTCTTTGAATTC AACGAGATTGCCGCTGCAAGGGGCTG CCTTGGACGTTTCCCTGGAAGTGAGATGATGGGCATCATCAAGAAGTTCATCAAAGCGAAGAACGATTAGTGCCAGTTCAACATACTGACGTTTGTGTAATCTGTTGACCTTGAGGCTTCCATGTCTGTAATAATTGCAAACAAGGATGTATTCAGAGAACCAGCTCAGTCTGAGATGAATAAGGCTTCTCATGGATCTTGAANCTTGCACTGAAAAGCATAAATAATCTGACCTGCTGTGTACATTTACCAAAAA ]
[+] EMBL BI799859 [ GATGTAGCTGATCGCAAGTCTGATCAGCGCAAAGCTTTCAGTGGCGATTCTGTCTTTGAATTC AACGAGATTGCCGCTGCAAGGGGCTG CCTTGGACGTTTCCCTGGAAGTGAGATGATGGGCATCATCAAGAAGTTCATCAAAGCGAAGAACGATTAGTCCCAGTTCAACATACTGACGTTTGTGTAATCTGTTGACCTTGAGGCTTCCATGTCTGTAATAATTGCAACCAAGGATGTATTCAGAGAACCAGCTCAGTCTGAGATGAATAAGGCTTCTCATGGATCTTGAATCTTGCACTGAAAAGCATAAATAATCTGACCTGCTGTGTACATTTACCAAAAAAAAAA]
[+] EMBL BI799169 [ GATGTAGCTGATCGCAAGTCTGATCAGCGC AAGCTTTCAGTGGCGATTCTGTCTTTGAATTC AACGAGATTGCCGCTGCAAGGGGCTG CCTTGGACGTTTCCCTGGAAGTGAGATGATGGGCATCATCAAGAAGTTCATCAAAGCGAAGAACGATTAGTCCCAGTTCAACATACTGACGTTTGTGTAATCTGTTGACCTTGAGGCTTCCATGTCTGTAATAATTGCAAACAAGGATGTATTCAGAGAACCAGCTCAGTCTGAGATGAATAAGGCTTCTCATGGATCTTGAATCTTGCACTGAAAAGCATAAATAATCTGACCTGCTGTGTACATTTACCAAAAAAAAAA]
[+] EMBL BI799278 [ GATGTAGCTGATCGCAAGTCTGATCAGCGC AAGCTTTCAGTGGCGATTCTGTCTTTGAATTC AACGAGATTGCCGCTGCAAGGGGCTG CCTTGGACGTTTCCCTGGAAGTGAGATGATGGGCATCATCAAGAAGTTCATC AAGCGAAGAACGATTAGTCCCAGTTCAACATACTGACGTTTGTGTAATCTGTTGACCTTGAGGCTTCCATGTCTGTAATAATTGCAAACAAGGATGTATTCAGAGAACCAGCTCAGTCTGAGATGAATAAGGCTTCTCATGGATCTTGAATCTTGCACTGAAAAGCATAAATAATCTGACCTGCTGTGTACATTTACCAAAAAAAAAA]
[+] EMBL AU033127 [ TTNCAGTGGCGATTCTGTCTTTGAATTCAAACGAGATTGCCGCTGCAAGGGGCTG CCTTGGACGTTTCCCTGGAAGTGAGATGATGGGCATCATCNAGAAGTTCATCAAAGCGAAGANCGATTAGTGCCAGTTCAACATACTGACGTTTGTGTAAACTGTTGACCTTGAGGCTTCCATGTCTGTAATAATTGCAAACAAGGATGTATTCAGAGAACCAGCTCAGTCTGAGATGAATAAGGCTTCTCATGGANCTTGAATCTTGCACTGAAAAGCATAAATAATCTGACCTGCTGTGTACATTTNCCnana ]
[+] EMBL AU161677 [ GGACGTTTCCCTGGAAGTGAGATGATGGGCATCATCAAGAAGTTCANCAAANCGAAGAACGATTAGTGCCAGTTCNACATACTGACGTTTGTGTAANCTGTTGACCTTGAGGCTTCCATGTCTGTAATAATTGCAAACAAGGATGTATTCAGAGAACCAGCTCAGTCTGAGATGAATAAGGCTTCTCATGGANCTTGAANCTTGCACTGAAAANCATAAATAANCTGACCTGCTGTGTACATTTACCAAAAA ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||