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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14193#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1004 fasta sequence
[ATCTCAAATCATCTCTCTGCCTCATCTCAAGAAGAACAAAGCTTACTATACCCAAGATCGATATAAATTTCCCTCTGTATAGAGCTTCTTTGATTTCATTTGCTAGCTATGAGCTACCAGACTCCTCCTCCTGCTGCCACAGGTAATTACGTACTGCTCATCCATTAGCCAAGAGTGCTTGAGCAGCTAGCTCATGTGACTTTTACTACTCTGAATTTGTAGCTAATTAAGCTAGTACTATCTCAGTTAATTTGTTCTTTCTTTTTTTCTCATGATGTGCGTGTGATATCAATTGCAGGGTACCCCTACCCGGCGCAAGAAGCAGGGCAGCAGCAGCAGCAGGCGTACCCTGCCTACGTGGCGCCGCCGCCGGCCGGCTACCCGACCAAGGACGGCCCGCAGGAGCAGTACCCCGCCGGCGCCGGCGCCGGCGAGACCACCAGCCGCGGCCACCACCACCACCACCACCACGGCGACGGATTCTGGAAAGGATGGTCAGTTCCATCAGCTAGCTTCTCTCCTCATTTCTTTCTCTTTTTCAGATTAAAATACTAATTCCTGCTTAATTAATTAACTGTGTGATCTCCTGCTGACGAAGCATGCATTCTCTGCTCTCCTGTGTTGTGTTGTTTCAGCTGCGCTGCACTCTGCTGCTGCTGCCTCCTCGACATGTGCTTCTGATGAGCAAGCATGGTGGTTCATCGATCATGCATGCATGGTGATCATGCCATATGATGTGCTGTGTGTATTGTGTATATCACTAGTTCATATATACTACTCCAGTATTTATTGTGTACTTAAATTATGTGTTGAGTGGATGTGTTGAGCACCATCTTTTTGTCTGATGGTGTTTGTTTACTTGATCATATCTTGTTCATTCTGTATATTTGGGGTCATTTGTGATATTCAATTTGGTGGATTATTTGGTACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK062655 [ATCTCAAATCATCTCTCTGCCTCATCTCAAGAAGAACAAAGCTTACTATACCCAAGATCGATATAAATTTCCCTCTGTATAGAGCTTCTTTGATTTCATTTGCTAGCTATGAGCTACCAGACTCCTCCTCCTGCTGCCACAGGTAATTACGTACTGCTCATCCATTAGCCAAGAGTGCTTGAGCAGCTAGCTCATGTGACTTTTACTACTCTGAATTTGTAGCTAATTAAGCTAGTACTATCTCAGTTAATTTGTTCTTTCTTTTTTTCTCATGATGTGCGTGTGATATCAATTGCAGGGTACCCCTACCCGGCGCAAGAAGCAGGGCAGCAGCAGCAGCAGGCGTACCCTGCCTACGTGGCGCCGCCGCCGGCCGGCTACCCGACCAAGGACGGCCCGCAGGAGCAGTACCCCGCCGGCGCCGGCGCCGGCGAGACCACCAGCCGCGGCCACCACCACCACCACCACCACGGCGACGGATTCTGGAAAGGATGGTCAGTTCCATCAGCTAGCTTCTCTCCTCATTTCTTTCTCTTTTTCAGATTAAAATACTAATTCCTGCTTAATTAATTAACTGTGTGATCTCCTGCTGACGAAGCATGCATTCTCTGCTCTCCTGTGTTGTGTTGTTTCAGCTGCGCTGCACTCTGCTGCTGCTGCCTCCTCGACATGTGCTTCTGATGAGCAAGCATGGTGGTTCATCGATCATGCATGCATGGTGATCATGCCATATGATGTGCTGTGTGTATTGTGTATATCACTAGTTCATATATACTACTCCAGTATTTATTGTGTACTTAAATTATGTGTTGAGTGGATGTGTTGAGCACCATCTTTTTGTCTGATGGTGTTTGTTTACTTGATCATATCTTGTTCATTCTGTATATTTGGGGTCATTTGTGATATTCAATTTGGTGG ]
[+] EMBL CF337471 [ GAGTGGATGTGTTGAGCACCATCTTTTTGTCTGATGGTGTTTGTTTACTTGATCATATCTTGTTCATTCTGTATATTTGGGGTCATTTGTGATATTCAATTTGGTGGATTATTTGGTACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_14193#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 713 fasta sequence
[YAKCAGAGGAAGAACAAAGCTTTAYTAATACCCAAAGATCGATATAAATTTCCCCTCTGTATAGAGCTTCTTTGATTTTCATTTGCTAGCTATGAGCTACCAGACTCCTCCTCCTGCTGCCACAGGGTACCCCTACCCGGCGCAAGAAGCAGGGCAGCAGCAGCAGCAGGCGTACCCTGCCTACGTGGCGCCGCCGCCGGCCGGCTACCCGACCAAGGACGGCCCGCAGGAGCAGTACCCCGCCGGCGCCGGCGCCGGCGAGACCACCAGCCGCGGCCACCCACCACCACCACCACCACGGCGACGGATTCTGGAAAGGATGCTGCGCTGCACTCTGCTGCTGCTGCCTCCTCGACATGTGCTTCTGATGAGCAAGCATGGTGGTTCATTCGATCATGCATGCATGGTGATCATGCCATATGATGTGCTGTGTGTATTGTGTATATCACTAGTTCATATATACTACTCCAGTATTTATTGTGTACTTAAATTATGTGTTGAGTGGATGTGTTGAGCACCATCTTTTTGTCTGATGGTGGTTTGTTTACTTGATCATATCTTGTTCATTCTGTATATTTGGGGTCATTTTGTGATATTCAAAWWWARRARRAWWAWWTAGSTAMRAAAARWAWTAGTCCGACTWCTMGAGCMSTWTTAGTCGASTNMGWAYYTACTGCANAAAATCNTATGAATTCGTAGAATACCTGGAAAAA]
[+] EMBL BP432972 [YAKCAGAGGAAGAACAAAGCTTTAYTAATACCCAAAGATCGATATAAATTTCCCCTCTGTATAGAGCTTCTTTGATTTTCATTTGCTAGCTATGAGCTACCAGACTCCTCCTCCTGCTGCCACAGGGTACCCCTACCCGGCGCAAGAAGCAGGGCAGCAGCAGCAGCAGGCGTACCCTGCCTACGTGGCGCCGCCGCCGGCCGGCTACCCGACCAAGGACGGCCCGCAGGAGCAGTACCCCGCCGGCGCCGGCGCCGGCGAGACCACCAGCCGCGGCCACCCACCACCACCACCACCACGGCGACGGATTCTGGAAAGGATGCTGCGCTGCACTCTGCTGCTGCTGCCTCCTCGACATGTGCTTCTGATGAGCAAGCATGGTGGTTCATTCGATCATGCATGCATGGTGATCATGCCATATGATGTGCTGTGTGTATTGTGTATATCACTAGTTCATATATACTACTCCAGTATTTATTGTGTACTTAAATTATGTGTTGAGTGGATGTGTTGAGCACCATCTTTTTGTCTGATGGTGGTTTGTTTACTTGATCATATCTTGTTCATTCTGTATATTTGGGGTCATTTTGTGATATTCAAAWWWARRARRAWWAWWTAGSTAMRAAAARWAWTAGTCCGACTWCTMGAGCMSTWTTAGTCGASTNMGWAYYTACTGCANAAAATCNTATGAATTCGTAGAATACCTGGAAAAA]
consensusID : consensus_14193#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 695 fasta sequence
[ACATCAGAATGGTAACACTG-CTCATCTCAAGAAGAACAAAGCTTACTATACCCAAGATCGATATAAATTTCCCTCTGTATAGAGCTTCTTTGATTTCATTTGCTAGCTATGAGCTACCAGACTCCTCC-TCCTGC-TGCCACAGGGTA-CCCCTACCCGGCGCAAGAAGCAGGGCAGCAGCAGCAGCAGGCGTACCCTGCCTACGTGGCGCCGCCGCCGGCCGGCTACCCGACCAAGGACGGCCCGCAGGAGCAGTACCCCGCCGGCGCCGGCGCCGGCGA-GACCACCAGCCGCGGCCACCACCACCACCACCACCACGGCGACGGATTCTGGAAAGGATGCTGCGCTGCACTCTGCTGCTGCTGCCTCCTCGACATGT-GCTTCTG-ATGAGCAAGCATGGTGGTTCATCGATCATGCAT-GCAT-GGT-GATCAT-GCCAT-AT-GATGTGCTGTGTGTATT-GTGT-ATATCACTAGTTCAT-ATATACTACT-CCAGTATTTATTGTGTACTTAAATTATGTGTTGAGTGGATGTGTTGAGCACCATCTTTTTGTCTGATGGTGTTTGTTTACTTGATCATATCTTGTTCATTCTGTATATTTGGGGTCATTTGTGATATTCAATTTGGTGGATTATTTGGTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CB966839 [ACATCAGAATGGTAACACTG CTCATCTCAAGAAGAACAAAGCTTACTATACCCAAGATCGATATAAATTTCCCTCTGTATAGAGCTTCTTTGATTTCATTTGCTAGCTATGAGCTACCAGACTCCTCC TCCTGC TGCCACAGGGTA CCCCTACCCGGCGCAAGAAGCAGGGCAGCAGCAGCAGCAGGCGTACCCTGCCTACGTAGCGCCGCCGCCGGCCGGCTACCCGACCAAGGACGGCCCGCAGGAGCAGTACCCCGCCGGCGCCGGCGCCGGCGA GACCACCAGCCGCGGCCACCACCACCACCACCACCACGGCGACGGATTCTGGAAAGGATGCTGCGCTGCACTCTGCTGCTGCTGCCTCCTCGACATGT GCTTCTG ATGAGCAAGCATGGTGGTTCATCGATCATGCAT TCAT GGT GATCAT GCCAT AT GATGTGCTGTGTGTGTT GTGT ATATCAC ]
[+] EMBL AU070769 [ CTGCCTCATCTCAAGAAGAACAAAGCTTACTATACCCAAGATCGATATAAATTTCCCTCTGTATAGAGCTTCTTTGATTTCATTTGCTAGCTATGAGCTACCAGACTCCTCC TCCTGC TGCCACAGGGTA CCCCTACCCGGCGCAAGANGCAGGGCAGCAGCAGCAGCAGGCGTACCCTGCCTACGTGGCGCCGCCGCCGGCCGGCTACCCGACCAAGGACGGCCCGCAGGAGCAGTACCCCGCCGGCGCCGGCGCCGGCGATNACCACCAGCCGCGGCCACCACCACCACCACCACCACGGCGACGGATTCTGGAAAGGATGCTGCGCTGCACTCTGCTGCTGCTGCCTCCTCGACATGTGGCTTCTGAATGAGCAAGCATGGTGGTTCATCGATCATGCATGGCAT GGTAGATCATGGCCAT ATGGATGTGCTGTGTGTATT a ]
[+] EMBL CB661597 [ ATACCCAAGATCGATATAAATTTCCCTCTGTATAGAGCTTCTTTGATTTCATTTGCTAGCTATGAGCTACCAGACTCCTCC TCCTGC TGCCACAGGGTA CCCCTACCCGGCGCAAGAAGCAGGGCAGCAGCAGCAGCAGGCGTACCCTGCCTACGTGGCGCCGCCGCCGGCCGGCTACCCGACCAAGGACGGCCCGCAGGAGCAGTACCCCGCCGGCGCCGGCGCCGGCGA GACCACCAGCCGCGGCCACCACCACCACCACCACCACGGCGACGGATTCTGGAAAGGATGCTGCGCTGCACTCTGCTGCTGCTGCCTCCTCGACATGT GCTTCTG ATGAGCAAGCATGGTGGTTCATCGATCATGCAT GCAT GGT GATCAT GCCAT AT GATGTGCTGTGTGTATT GTGT ATATCACTAGTTCAT ATATACTACT CCAGTATTTATTGTGTACTTAAATTATGTGTTGAGTGGATGTGTTGAGCACCATCTTTTTGTCTGATGGTGTTTGTTTACTTGATCATATCTTGTTCATTCTGTATATTTGGGGTCATTTGTGATATTCAATTTGGTGGATTATTTGG ]
[+] EMBL AT003625 [ ACTCCTCCTTCCTGCTTGCCACAGGGTACCCCCTACCCGGCGCAAGAAGCAGGGCAGCAGCAGCAGCAGGCGTACCCTGCCTACGTGGCGCCGCCGCCGGCCGGCTACCCGACCAAGGACGGCCCGCAGGAGCAGTACCCCGCCGGCGCCGGCGCCGGCGA GACCACCAGCCGCGGCCACCACCACCACCACCACCACGGCGACGGATTCTGGAAAGGATGCTGCGCTGCACTCTGCTGCTGCTGCCTCCTCGACATGT GCTTCTG ATGAGCAAGCATGGTGGTTCATCGATCATGCAT GCAT GGT GATCAT GCCAT AT GATGTGCTGTGTGTATT GTGT ATATCACTAGTTCAT ATATACTACT CCAGTATTTATTGTGTACTTAAAaaaaaa ]
[+] EMBL AU032107 [ AGGGTA CCCCTACCCGGCGCAAGAAGCAGGGCAGCAGCAGCAGCAGGCGTACCCTGCCTACGTGGCGCCGCCGCCGGCCGGCTACCCGACCAAGGACGGCCCGCAGGAGCAGTACCCCGCCGGCGCCGGCGCCGG GANGACCACCAGCCGCGGCCACCACCACCACCACCACCACGGCGACGGATTCTGGAAAGGATGCTGCGCTGCACTCTGCTGCTGCTGCCTCCTCGACATGT GCTTCTG ATGAGCAAGCATGGTGGTTCATCGATCATGCAT GCATGGGT GATCAT GCCATAAT GATGTGCTGTGTGTATTGGTGTAATATCACTAGTTCATAANATACTACTCCCAGT ]
[+] EMBL CF308065 [ GCCCGCAGGAGCAGTACCCCGCCGGCGCCGGCGCCGGCGA GACCACCAGCCGCGGCCACCACCACCACCACCACCACGGCGACGGATTCTGGAAAGGATGCTGCGCTGCACTCTGCTGCTGCTGCCTCCTCGACATGT GCTTCTG ATGAGCAAGCATGGTGGTTCATCGATCATGCAT GCAT GGT GATCAT GCCAT AT GATGTGCTGTGTGTATT GTGT ATATCACTAGTTCAT ATATACTACT CCAGTATTTATTGTGTACTTAAATTATGTGTTGAGTGGATGTGTTGAGCACCATCTTTTTGTCTGATGGTGTTTTTTTACTTGATCATATCTTGTTCATTCTGTATATTTGGGGTCATTTGTGATATTCAATTTGGTGGATTATTTGGTACAAAAAAAAAAAAAAAAAAAAAAAAA ]
[+] EMBL CF309151 [ gagtagaaaGCGATGGATTCTGGAAAGGATGCTGCGCTGCACTCTGCTGCTGCTGCCTCCTCGACATGT GCTTCTG ATGAGCAAGCATGGTGGTTCATCGATCATGCAT GCAT GGT GATCAT GCCAT AT GATGTGCTGTGTGTATT GTGT ATATCACTAGTTCAT ATTTTCTACT CCAGTATTTATTGTGTACTTAAATTATGTGTTGAGTGGATGTGTTGAGCACCATCTTTTTGTCTGATGGTGTTTGTTTACTTGATCATATCTTGTTCATTCTGTATATTTGGGGTCATTTGTGATATTCAATTTGGTGGATTATTTGGTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_14193#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 611 fasta sequence
[AACAAAGCTTACTATACCCAAGATCGATATAAATTTCCCTCTGTATAGAGCTTCTTTGATTTCATTTGCTAGCTATGAGCTACCAGACTCCTCCTCCTGCTGCCACAGGGTACCCCTACCCGGCGCAAGAAGCAGGGCAGCAGCAGCAGCAGGCGTACCCTGCCTACGTGGCGCCGCCGCCGGCCGGCTACCCGACCAAGGACGGCCCGCAGGAGCAGTACCCCGCCGGCGCCGGCGCCGGCGAGACCACCAGCCGCGGCCACCACCACCACCACCACCACGGCAACGGATTCTGGAAAGGATGCTGCGCTGCACTCTGCTGCTGCTGCCTCCTCGACATGTGCTTCTGATGAGCAAGCATGGTGGTTCATCGATCATGCATGCATGGTGATCATGCCATATGATGTGCTGTGTGTATTGTGTATATCACTAGTTCATATATACTACTCCNGTATTTATTGTGTACTTAAATTATGTGTTGAGTGGATGTGTTGAGCACCATCTTTTTGTCTGATGGTGTTTGTTTACTTGATCATATCTTGTTCATTCTGTATATTTGGNGTCATTTGTGATATTTCATTTGGTGGATTAAAAANNNNNNNNNNNNNNNN]
[+] EMBL CA754248 [AACAAAGCTTACTATACCCAAGATCGATATAAATTTCCCTCTGTATAGAGCTTCTTTGATTTCATTTGCTAGCTATGAGCTACCAGACTCCTCCTCCTGCTGCCACAGGGTACCCCTACCCGGCGCAAGAAGCAGGGCAGCAGCAGCAGCAGGCGTACCCTGCCTACGTGGCGCCGCCGCCGGCCGGCTACCCGACCAAGGACGGCCCGCAGGAGCAGTACCCCGCCGGCGCCGGCGCCGGCGAGACCACCAGCCGCGGCCACCACCACCACCACCACCACGGCAACGGATTCTGGAAAGGATGCTGCGCTGCACTCTGCTGCTGCTGCCTCCTCGACATGTGCTTCTGATGAGCAAGCATGGTGGTTCATCGATCATGCATGCATGGTGATCATGCCATATGATGTGCTGTGTGTATTGTGTATATCACTAGTTCATATATACTACTCCNGTATTTATTGTGTACTTAAATTATGTGTTGAGTGGATGTGTTGAGCACCATCTTTTTGTCTGATGGTGTTTGTTTACTTGATCATATCTTGTTCATTCTGTATATTTGGNGTCATTTGTGATATTTCATTTGGTGGATTAAAAANNNNNNNNNNNNNNNN]
consensusID : consensus_14193#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 407 fasta sequence
[GGATTCTGGAAAGGATGCTGCGCTGCACTCTGCTGCTGCTGCCTCCTCGACATGTGCTTCTGATGAGCAAGCATGGTGGTTCATCGATCATGCATGCATGGTGATCATGCCATATGATGTGCTGTGTGTATTGTGTATATCACTAGTTCATATATACTACTCCAGTATTTATTGTGTACTTAAATTATGTGTTGAGTGGATGTGTTGAGCACCATCTTTTTGTCTGATGGTGTTTGTTTACTTGATCATATCTTGTTCA-------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTTGTTTCCCCTTCCCTTAGAAAGGGGAAATTTTTTAAAACCCGGGGGAATTTCCCCTTTAGGGG]
[+] EMBL AU071241 [GGATTCTGGAAAGGATGCTGCGCTGCACTCTGCTGCTGCTGCCTCCTCGACATGTGCTTCTGATGAGCAAGCATGGTGGTTCATCGATCATGCATGCATGGTGATCATGCCATATGATGTGCTGTGTGTATTGTGTATATCACTAGTTCATATATACTACTCCAGTATTTATTGTGTACTTAAATTATGTGTTGAGTGGATGTGTTGAGCACCATCTTTTTGTCTGATGGTGTTTGTTTACTTGATCATATCTTGTTCA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA ]
[+] EMBL CF312563 [ CATATGATGTGCTGTGTGTATTGTGTATATCACTAGTTCATATATACTACTCCAGTATTTATTGTGTACTTAAATTATGTGTTGAGTGGATGTGTTGAGCACCATCTTTTTGTCTGATGGTGTTTGTTTACTTGATCATATCTTGTTCATTCTGTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTTGTTTCCCCTTCCCTTAGAAAGGGGAAATTTTTTAAAACCCGGGGGAATTTCCCCTTTAGGGG]
consensusID : consensus_14193#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 344 fasta sequence
[GGGGACGAATTTTGAAAAGAATGTTGCGCTGCATTTTGCTGCTGCTGCCTCCTCAACATGTGCTTTTAATGACCAAGCATGGTGGTTCATCGATCAGGCATGCATGGTGATCATCCCATATAATGTGCTGTGTGTATTGTGAAAACCACTAGTTCAAATATACTACTCCAGTATTTATTGTGTACTTAAATTATGTGTAAAAAGAATGTGTTGAGCCCCATCTTTTTGTCTAATGGTGTTTTTTAACTTGATCATATCTTGTTCATTCGGAAAATTGGGGGTCATTTGTAATATTCAATTTGGTGGATTATTTGGTCCAAAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CF308066 [GGGGACGAATTTTGAAAAGAATGTTGCGCTGCATTTTGCTGCTGCTGCCTCCTCAACATGTGCTTTTAATGACCAAGCATGGTGGTTCATCGATCAGGCATGCATGGTGATCATCCCATATAATGTGCTGTGTGTATTGTGAAAACCACTAGTTCAAATATACTACTCCAGTATTTATTGTGTACTTAAATTATGTGTAAAAAGAATGTGTTGAGCCCCATCTTTTTGTCTAATGGTGTTTTTTAACTTGATCATATCTTGTTCATTCGGAAAATTGGGGGTCATTTGTAATATTCAATTTGGTGGATTATTTGGTCCAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_14193#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 265 fasta sequence
[GCTGTGTGTATTGTGTATATCACTAGTTCATATATACTACTCCAGTATTTATTGTGTACTTAAATTATGTGTTGAGTGGATGTGTTGAGCACCATCTTTTTGTCTGATGGTGTTTGTTTACTTGATCATATCTTGTTCATTCTGTATATTTGGGGTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTT]
[+] EMBL CF320367 [GCTGTGTGTATTGTGTATATCACTAGTTCATATATACTACTCCAGTATTTATTGTGTACTTAAATTATGTGTTGAGTGGATGTGTTGAGCACCATCTTTTTGTCTGATGGTGTTTGTTTACTTGATCATATCTTGTTCATTCTGTATATTTGGGGTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14193#1 ------------------------------------------------------------
consensus_14193#3 ------------------------------------------------------------
consensus_14193#5 ------------------------------------------------------------
consensus_14193#2 ------------------------------------------------------------
consensus_14193#0 ATCTCAAATCATCTCTCTGCCTCATCTCAAGAAGAACAAAGCTTACTATACCCAAGATCG 60
consensus_14193#4 ------------------------------------------------------------
consensus_14193#6 ------------------------------------------------------------
consensus_14193#1 ------------------------------------------------------------
consensus_14193#3 ------------------------------------------------------------
consensus_14193#5 ------------------------------------------------------------
consensus_14193#2 ------------------------------------------------------------
consensus_14193#0 ATATAAATTTCCCTCTGTATAGAGCTTCTTTGATTTCATTTGCTAGCTATGAGCTACCAG 120
consensus_14193#4 ------------------------------------------------------------
consensus_14193#6 ------------------------------------------------------------
consensus_14193#1 -------------------------------------------------YAKCAGAGGAA 11
consensus_14193#3 ------------------------------------------------------------
consensus_14193#5 ------------------------------------------------------------
consensus_14193#2 ---------------------------ACATCAGAATGGTAACACTGCTCATCTCAAGAA 33
consensus_14193#0 ACTCCTCCTCCTGCTGCCACAGGTAATTACGTACTGCTCATCCATTAGCCAAGAGTGCTT 180
consensus_14193#4 ------------------------------------------------------------
consensus_14193#6 ------------------------------------------------------------
consensus_14193#1 GAACAA--AGCTTTAYTAATACCCAAAGATCGATATAAATTTCCCCTCTGTATAGAGCTT 69
consensus_14193#3 -AACAA--AGCTT-ACTA-TACCCAA-GATCGATATAAATTTCCC-TCTGTATAGAGCTT 53
consensus_14193#5 ------------------------------------------------------------
consensus_14193#2 GAACAA--AGCTT-ACTA-TACCCAA-GATCGATATAAATTTCCC-TCTGTATAGAGCTT 87
consensus_14193#0 GAGCAGCTAGCTCATGTGACTTTTACTACTCTGAATTTGTAGCTAATTAAGCTAGTACTA 240
consensus_14193#4 ------------------------------------------------------------
consensus_14193#6 ------------------------------------------------------------
consensus_14193#1 CTTTGATT--TTCATTTGCTAGCTATGAGCTACCAGACTCCTCCTCCTGCTGCCACAGGG 127
consensus_14193#3 CTTTGATT--T-CATTTGCTAGCTATGAGCTACCAGACTCCTCCTCCTGCTGCCACAGGG 110
consensus_14193#5 ------------------------------------------------------------
consensus_14193#2 CTTTGATT--T-CATTTGCTAGCTATGAGCTACCAGACTCCTCCTCCTGCTGCCACAGGG 144
consensus_14193#0 TCTCAGTTAATTTGTTCTTTCTTTTTTTCTCATGATGTGCGTGTGATATCAATTGCAGGG 300
consensus_14193#4 ------------------------------------------------------------
consensus_14193#6 ------------------------------------------------------------
consensus_14193#1 TACCCCTACCCGGCGCAAGAAGCAGGGCAGCAGCAGCAGCAGGCGTACCCTGCCTACGTG 187
consensus_14193#3 TACCCCTACCCGGCGCAAGAAGCAGGGCAGCAGCAGCAGCAGGCGTACCCTGCCTACGTG 170
consensus_14193#5 ------------------------------------------------------------
consensus_14193#2 TACCCCTACCCGGCGCAAGAAGCAGGGCAGCAGCAGCAGCAGGCGTACCCTGCCTACGTG 204
consensus_14193#0 TACCCCTACCCGGCGCAAGAAGCAGGGCAGCAGCAGCAGCAGGCGTACCCTGCCTACGTG 360
consensus_14193#4 ------------------------------------------------------------
consensus_14193#6 ------------------------------------------------------------
consensus_14193#1 GCGCCGCCGCCGGCCGGCTACCCGACCAAGGACGGCCCGCAGGAGCAGTACCCCGCCGGC 247
consensus_14193#3 GCGCCGCCGCCGGCCGGCTACCCGACCAAGGACGGCCCGCAGGAGCAGTACCCCGCCGGC 230
consensus_14193#5 ------------------------------------------------------------
consensus_14193#2 GCGCCGCCGCCGGCCGGCTACCCGACCAAGGACGGCCCGCAGGAGCAGTACCCCGCCGGC 264
consensus_14193#0 GCGCCGCCGCCGGCCGGCTACCCGACCAAGGACGGCCCGCAGGAGCAGTACCCCGCCGGC 420
consensus_14193#4 ------------------------------------------------------------
consensus_14193#6 ------------------------------------------------------------
consensus_14193#1 GCCGGCGCCGGCGAGACCACCAGCCGCGGCCACCCACCACCACCACCACCACGGCGACGG 307
consensus_14193#3 GCCGGCGCCGGCGAGACCACCAGCCGCGGCCACC-ACCACCACCACCACCACGGCAACGG 289
consensus_14193#5 ----------------------------------------------------GGGGACGA 8
consensus_14193#2 GCCGGCGCCGGCGAGACCACCAGCCGCGGCCACC-ACCACCACCACCACCACGGCGACGG 323
consensus_14193#0 GCCGGCGCCGGCGAGACCACCAGCCGCGGCCACC-ACCACCACCACCACCACGGCGACGG 479
consensus_14193#4 ------------------------------------------------------------
consensus_14193#6 ------------------------------------------------------------
consensus_14193#1 ATTCTGGAAAGGATG--------------------------------------------- 322
consensus_14193#3 ATTCTGGAAAGGATG--------------------------------------------- 304
consensus_14193#5 ATTTTGAAAAGAATG--------------------------------------------- 23
consensus_14193#2 ATTCTGGAAAGGATG--------------------------------------------- 338
consensus_14193#0 ATTCTGGAAAGGATGGTCAGTTCCATCAGCTAGCTTCTCTCCTCATTTCTTTCTCTTTTT 539
consensus_14193#4 ------------------------------------------------------------
consensus_14193#6 ------------------------------------------------------------
consensus_14193#1 ------------------------------------------------------------
consensus_14193#3 ------------------------------------------------------------
consensus_14193#5 ------------------------------------------------------------
consensus_14193#2 ------------------------------------------------------------
consensus_14193#0 CAGATTAAAATACTAATTCCTGCTTAATTAATTAACTGTGTGATCTCCTGCTGACGAAGC 599
consensus_14193#4 ------------------------------------------------------------
consensus_14193#6 ------------------------------------------------------------
consensus_14193#1 ------------------------------------CTGCGCTGCACTCTGCTGCTGCTG 346
consensus_14193#3 ------------------------------------CTGCGCTGCACTCTGCTGCTGCTG 328
consensus_14193#5 ------------------------------------TTGCGCTGCATTTTGCTGCTGCTG 47
consensus_14193#2 ------------------------------------CTGCGCTGCACTCTGCTGCTGCTG 362
consensus_14193#0 ATGCATTCTCTGCTCTCCTGTGTTGTGTTGTTTCAGCTGCGCTGCACTCTGCTGCTGCTG 659
consensus_14193#4 -------------------GGATTCTGGAAAGGATGCTGCGCTGCACTCTGCTGCTGCTG 41
consensus_14193#6 ------------------------------------------------------------
consensus_14193#1 CCTCCTCGACATGTGCTTCTGATGAGCAAGCATGGTGGTTCATTCGATCATGCATGCATG 406
consensus_14193#3 CCTCCTCGACATGTGCTTCTGATGAGCAAGCATGGTGGTTCAT-CGATCATGCATGCATG 387
consensus_14193#5 CCTCCTCAACATGTGCTTTTAATGACCAAGCATGGTGGTTCAT-CGATCAGGCATGCATG 106
consensus_14193#2 CCTCCTCGACATGTGCTTCTGATGAGCAAGCATGGTGGTTCAT-CGATCATGCATGCATG 421
consensus_14193#0 CCTCCTCGACATGTGCTTCTGATGAGCAAGCATGGTGGTTCAT-CGATCATGCATGCATG 718
consensus_14193#4 CCTCCTCGACATGTGCTTCTGATGAGCAAGCATGGTGGTTCAT-CGATCATGCATGCATG 100
consensus_14193#6 ------------------------------------------------------------
consensus_14193#1 GTGATCATGCCATATGATGTGCTGTGTGTATTGTGTATATCACTAGTTCATATATACTAC 466
consensus_14193#3 GTGATCATGCCATATGATGTGCTGTGTGTATTGTGTATATCACTAGTTCATATATACTAC 447
consensus_14193#5 GTGATCATCCCATATAATGTGCTGTGTGTATTGTGAAAACCACTAGTTCAAATATACTAC 166
consensus_14193#2 GTGATCATGCCATATGATGTGCTGTGTGTATTGTGTATATCACTAGTTCATATATACTAC 481
consensus_14193#0 GTGATCATGCCATATGATGTGCTGTGTGTATTGTGTATATCACTAGTTCATATATACTAC 778
consensus_14193#4 GTGATCATGCCATATGATGTGCTGTGTGTATTGTGTATATCACTAGTTCATATATACTAC 160
consensus_14193#6 --------------------GCTGTGTGTATTGTGTATATCACTAGTTCATATATACTAC 40
*************** * * ********** *********
consensus_14193#1 TCCAGTATTTATTGTGTACTTAAATTATGTGTTGAGTGGATGTGTTGAGCACCATCTTTT 526
consensus_14193#3 TCCNGTATTTATTGTGTACTTAAATTATGTGTTGAGTGGATGTGTTGAGCACCATCTTTT 507
consensus_14193#5 TCCAGTATTTATTGTGTACTTAAATTATGTGTAAAAAGAATGTGTTGAGCCCCATCTTTT 226
consensus_14193#2 TCCAGTATTTATTGTGTACTTAAATTATGTGTTGAGTGGATGTGTTGAGCACCATCTTTT 541
consensus_14193#0 TCCAGTATTTATTGTGTACTTAAATTATGTGTTGAGTGGATGTGTTGAGCACCATCTTTT 838
consensus_14193#4 TCCAGTATTTATTGTGTACTTAAATTATGTGTTGAGTGGATGTGTTGAGCACCATCTTTT 220
consensus_14193#6 TCCAGTATTTATTGTGTACTTAAATTATGTGTTGAGTGGATGTGTTGAGCACCATCTTTT 100
*** **************************** * * *********** *********
consensus_14193#1 TGTCTGATGGTGGTTTGTTTACTTGATCATATCTTGTTCATTCTGTATATTTGGGGTCAT 586
consensus_14193#3 TGTCTGATGGTG-TTTGTTTACTTGATCATATCTTGTTCATTCTGTATATTTGGNGTCAT 566
consensus_14193#5 TGTCTAATGGTG-TTTTTTAACTTGATCATATCTTGTTCATTCGGAAAATTGGGGGTCAT 285
consensus_14193#2 TGTCTGATGGTG-TTTGTTTACTTGATCATATCTTGTTCATTCTGTATATTTGGGGTCAT 600
consensus_14193#0 TGTCTGATGGTG-TTTGTTTACTTGATCATATCTTGTTCATTCTGTATATTTGGGGTCAT 897
consensus_14193#4 TGTCTGATGGTG-TTTGTTTACTTGATCATATCTTGTTCAAAAAAAAAAAAAAAAAAAAA 279
consensus_14193#6 TGTCTGATGGTG-TTTGTTTACTTGATCATATCTTGTTCATTCTGTATATTTGGGGTCAG 159
***** ****** *** ** ******************** * * *
consensus_14193#1 TTTGTGATATTCAAAWWWARRARRAWWAWWTAGSTAMRAAAARWAWTAGTCCGACTWCTM 646
consensus_14193#3 TT-GTGATATTTCA--TTTGGTGGATTAAAAANNNNNNNNNNNNNNNN------------ 611
consensus_14193#5 TT-GTAATATTCAA--TTTGGTGGATTATTTGGTCCAAAAAAAAAAAAAAAAAAAAAAAA 342
consensus_14193#2 TT-GTGATATTCAA--TTTGGTGGATTATTTGGTACAAAAAAAAAAAAAAAAAAAAAAAA 657
consensus_14193#0 TT-GTGATATTCAA--TTTGGTGGATTATTTGGTACCAAAAAAAAAAAAAAAAAAAAAAA 954
consensus_14193#4 AAAAAAAAAAAAAA--AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 337
consensus_14193#6 AAAAAAAAAAAAAA--AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 217
* * * * *
consensus_14193#1 GAGCMSTWTTAGTCGASTNMGWAYYTACTGCANAAAATCNTATGAATTCGTAGAATACCT 706
consensus_14193#3 ------------------------------------------------------------
consensus_14193#5 AA---------------------------------------------------------- 344
consensus_14193#2 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA---------------------- 695
consensus_14193#0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA---------- 1004
consensus_14193#4 AACCCCTTGTTTCCCCTTCCCTTAGAAAGGGGAAATTTTTTAAAACCCGGGGGAATTTCC 397
consensus_14193#6 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTT------------ 265
consensus_14193#1 GGAAAAA--- 713
consensus_14193#3 ----------
consensus_14193#5 ----------
consensus_14193#2 ----------
consensus_14193#0 ----------
consensus_14193#4 CCTTTAGGGG 407
consensus_14193#6 ----------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||