cluster # 14219

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Oryza sativa
cluster # 14219 cluster # 14219 Sequences # 15 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14219#0 length = 696 sequences # 11
consensus_14219#1 length = 611 sequences # 2

consensus_14219#2 length = 518 sequences # 1
consensus_14219#3 length = 485 sequences # 1

consensusID : consensus_14219#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 696
fasta sequence

                              [CCGAGCTCCTCAAGCTCTCTCTCTCTTCCTCAAGACCGGCTGCCGCCATCGTCGGCCGATCTCCCTCACCGGAGCTCCACAAGACAAATCCTTGCACCACTAGCTTCACCTCACTCCGGCGAATCCATTTTACCCATTTACCCCTTCTCTCCCACCTCAAATCAAGCCACTACCACCACTCTTCTTGCTGCCGCGGCCAAGATCTTGCCGCCGCCGTTCCGGCCATTCTCCTCTCTCCCTATGCCTTCCTC-CACCTTCCTCGGGTGCGCGTCAGTCGGGAACACCA-CCGGCCGCAGACGTCG-CCGATCCTCGGCCACCGGAGCACCGACG--CCCTTCTCCCTCCCTCTCCTCTGTACTCGGCTGGAAGGAGAAGAGAGGAAGAAGAAGACGAGAAAAAGAGGTTGAAGGAACACCTGACAGTGGGCCCCACTTTTATAAAATATTGTGCTAACAAGAAGATCAGAAGGAAGCGAGGTCTACAACAACGACGAGTTTATCTAGGCTAGTCTACACTCGAGCGTTTGCCTGTGGAGTTCTTTGGAGTGTACTAGTTGTAATTCTAGTAGTTAAAGAGTTTAGGAGTTTAATACTTTGGATTTTCTTGTATTTCAAATAA-GGATATATTAGTTTGGATCTTTTCACCCTTTAAAAAAAAAAAAAAAAAACACTCACTGTCATGCCCGTTACGTAGCGTAT]

[+] EMBL CF316255             [CCGAGCTCCTCAAGCTCTCTCTCTCTTCCTCAAGACCGGCTGCCGCCATCGTCGGCCGATCTCCCTCACCGGAGCTCCACAAGACAAATCCTTGCACCACTAGCTTCACCTCACTCCGGCGAATCCATTTTACCCATTTACCCCTTCTCTCCCACCTCAAATCAAGCCACTACCACCACTCTTCTTGCTGCCGCGGCCAAGATCTTGCCGCCGCCGTTCCGGCCATTCTCCTCTCTCCCTATGCCTTCCTC CACCTTCCTCGGGTGCGCGTCAGTCGGGAACACCA CCGGCCGCAGACGTCG CCGATCCTCGGCCACCGGAGCACCGACG  CCCTTCTCCCTCCCTCTCCTCTGTACTCGGCTGGAAGGAGAAGAGAGGAAGAAGAAGACGAGAAAAAGAGGTTGAAGGAACACCTGACAGTGGGCCCCACTTTT                                                                                                                                                                                                                                                                       ]
[+] EMBL CF314553             [ CGAGCTCCTCAAGCTCTCTCTCTCTTCCTCAAGACCGGCTGCCGCCATCGTCGGCCGATCTCCCTCACCGGAGCTCCACAAGACAAATCCTTGCACCACTAGCTTCACCTCACTCCGGCGAATCCATTTTACCCATTTACCCCTTCTCTCCCACCTCAAATCAAGCCACTACCACCACTCTTCTTGCTGCCGCGGCCAAGATCTTGCCGCCGCCGTTCCGGCCATTCTCCTCTCTCCCTATGCCTTCCTC CACCTTCCTCGGGTGCGCGTCAGTCGGGAACACCA CCGGCCGCAGACGTCG CCGATCCTCGGCCACCGGAGCACCGACG  CCCTTCTCCCTCCCTCTCCTCTGTACTCGGCTGGAAGGAGAAGAGAGGAAGAAGAAGACGAGAAAAAGAGGTTGAAGGAACACCTGACAGTGGGCCCCACTTTTATAAAATATTGTGCTAACAAGAAGATCAGAAGGAAGCGAGGTCTACAACAACGACGAGTTTATCTAGGCTAGTCTACACTCGAGCGTTTGCCTGTGGAGTTCTTTGAAGTGTACTAGTTGTAATTCTAGTAGTTAAAGAAGTTAGGAGTTTAATACTTTGGATTTTCTTGTATTTCAAATAAGGGATATATTAGTTTGGATCTTTTCACCCTTTAAAAAAAAAAAAAAAAAACACT                           ]
[+] EMBL CF317240             [ CGAGCTCCTCAAGCTCTCTCTCTCTTCCTCAAGACCGGCTGCCGCCATCGTCGGCCGATCTCCCTCACCGGAGCTCCACAAGACAAATCCTTGCACCACTAGCTTCACCTCACTCCGGCGAATCCATTTTACCCATTTACCCCTTCTCTCCCACCTCAAATCAAGCCACTACCACCACTCTTCTTGCTGCCGCGGCCAAGATCTTGCCGCCGCCGTTCCGGCCATTCTCCTCTCTCCCTATGCCTTCCTC CACCTTCCTCGGGTGCGCGTCAGTCGGGAACACCA CCGGCCGCAGACGTCG CCGATCCTCGGCCACCGGAGCACCGACG  CCCTTCTCCCTCCCTCTCCTCTGTACTCGGCTGGAAGGAGAAGAGAGGAAGAAGAAGACGAGAAAAAGAGGTTGAAGGAACACCTGGCAGTGGGCCCCACTTTTATAAAATATTGTGCTAACAAGAAGATCAGAAGGAAGCGAGGTCTACAACAACGACGAGTTTATCTAGGCTAGTCTACACTCGAGCGTTTGCCTGTGGAGTTCTTTGGAGTGTACTAGTTGTAATTCTAG                                                                                                                                      ]
[+] EMBL CF321128             [ CGAGCTCCTCAAGCTCTCTCTCTCTTCCTCAAGACCGGCTGCCGCCATCGTCGGCCGATCTCCCTCACCGGAGCTCCACAAGACAAATCCTTGCACCACTAGCTTCACCTCACTCCGGCGAATCCATTTTACCCATTTACCCCTTCTCTCCCACCTCAAATCAAGCCACTACCACCACTCTTCTTGCTGCCGCGGCCAAGATCTTGCCGCCGCCGTTCCGGCCATTCTCCTCTCTCCCTATGCCTTCCTC CACCTTCCTCGGGTGCGCGTCAGTCGGGAACACCA CCGGCCGCAGACGTCG CCGATCCTCGGCCACCGGAGCACCGACG  CCCTTCTCCCTCCCTCTCCTCTGTACTCGGCTGGAAGGAGAAGAGAGGAAGAAGAAGACGAGAAAAAGAGGTTGAAGGAACACCTGACAGTGGGCCCCACTTTTATAAAATATTGTGCTAACAAGAAGATCAGAAGGAAGCGAGGTCTACAACAACGACGAGTTTATCTAGGCTAGTCTACACTCGAGCGTTTGCCTGTGGAGTTCTTTGGAGTGTACTAGTTGTA                                                                                                                                             ]
[+] EMBL CF315449             [   AGCTCCTCAAGCTCTCTCTCTCTTCCTCAAGACCGGCTGCCGCCATCGTCGGCCGATCTCCCTCACCGGAGCTCCACAAGACAAATCCTTGCACCACTAGCTTCACCTCACTCCGGCGAATCCATTTTACCCATTTACCCCTTCTCTCCCACCTCAAATCAAGCCACTACCACCACTCTTCTTGCTGCCGCGGCCAAGATCTTGCCGCCGCCGTTCCGGCCATTCTCCTCTCTCCCTATGCCTTCCTC CACCTTCCTCGGGTGCGCGTCAGTCGGGAACACCA CCGGCCGCAGACGTCG CCGATCCTCGGCCACCGGAGCACCGACG  CCCTTCTCCCTCCCTCTCCTCTGTACTCGGCTGGAAGGAGAAGAGAGGAAGAAG                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF331382             [    GCTCCTCAAGCTCTCTCTCTCTTCCTCAAGACCGGCTGCCGCCATCGTCGGCCGATCTCCCTCACCGGAGCTCCACAAGACAAATCCTTGCACCACTAGCTTCACCTCACTCCGGCGAATCCATTTTACCCATTTACCCCTTCTCTCCCACCTCAAATCAAGCCACTACCACCACTCTTCTTGCTGCCGCGGCCAAGATCTTGCCGCCGCCGTTCCGGCCATTCTCCTCTCTCCCTATGCCTTCCTC CACCTTCCTCGGGTGCGCGTCAGTCGGGGACACCA CCGGCCGCAGACGTCG CCGATCCTCGGCCACCGGAGCACCGACG  CCCTTCTCCCTCCCTCTCCTCTGTACTCGGCTGGAAGGAGAAGAGAGGAAGAAGAAGACGAGAAAAAGAGGTTGAAGGAACACCTGACAGTGGGCCCCACTTTTATAAAATATTGTGCTAACAAGAAGATCAGAAGGAAGCGAGGTCTACAACAACGACGAGTTTATCTAGGCTAGTCTACACTCGA                                                                                                                                                                                    ]
[-] EMBL CF314552             [                                                                                                                                                                                                 CGGCCAAGATCTTGCCGCCGCCGTTCCGGCCATTCTCCTCTCTCCCTATGCCTTCCTCNCACCTTCCTCGGGTGCGCGTCAGTCGGGAACACCACCCGGCCGCAGACGTCGCCCGATCCTCGGCCACCGGAGCACCGACGNNCCCTTCTCCCTCCCTCTCCTCTGTACTCGGCTGGAAGGAGAAGAGAGGAAGAAGAAGACGAGAAAAAGAGGTTGAAGGAACACCTGACAGTGGGCCCCACTTTTATAAAATATTGTGCTAACAAGAAGATCAGAAGGAAGCGAGGTCTACAACAACGACGAGTTTATCTAGGCTAGTCTACACTCGAGCGTTTGCCTGTGGAGTTCTTTGAAGTGTACTAGTTGTAATTCTAGTAGTTAAAGAGTTTAGGAGTTTAATACTTTGGATTTTCTTGTATTTCAAATAA GGATATATTAGTTTGGATCTTTTCACCCTTTAAAAAA                                           ]
[-] EMBL CF317239             [                                                                                                                                                                                                 CGGCCAAGATCTTGCCGCCGCCGTTCCGGCCATTCTCCTCTCTCCCTATGCCTTCCTC CACCTTCCTCGGGTGCGCGTCAGTCGGGAACACCA CCGGCCGCAGACGTCG CCGATCCTCGGCCACCGGAGCACCGACG  CCCTTCTCCCTCCCTCTCCTCTGTACTCGGCTGGAAGGAGAAGAGAGGAAGAAGAAGACGAGAAAAAGAGGTTGAAGGAACACCTGGCAGTGGGCCCCACTTTTATAAAATATTGTGCTAACAAGAAGATCAGAAGGAAGCGAGGTCTACAACAACGACGAGTTTATCTAGGCTAGTCTACACTCGAGCGTTTGCCTGTGGAGTTCTTTGGAGTGTACTAGTTGTAATTCTAGTAGTTAAAGAGTTTAGGAGTTTAATACTTTGGATTTTCTTGTATTTCAAATAA GGATATATTAGTTTGGATCTTTTCACCCTTTAAAAA                                            ]
[+] EMBL CF337502             [                                                                                                                                                                                                                                                                                                                                                                                                                                                      TATAAAATATTGTGCTAACAAGAAGATCAGAAGGAAGCGAGGTCTACAACAACGACGAGTTTATCTAGGCTAGTCTACACTCGAGCGTTTGCCTGTGGAGTTCTTTGGAGT                                                                                                                                                         ]
[+] EMBL CF321063             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGGATTTTCTTGTATTTCAAATAA GGATATATTAGTTTGGATCTTTTCACCCTTTAAAAAAAAAAAAAAAAAAAAAACACTGTCATGCCCGTTACGTAGCGTAT]
[-] EMBL CF321062             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GGATTTTCTTGTATTTCAAATAA GGATATATTAGTTTGGATCTTTTCACCCTTTAAAAAAAAAA                                       ]




>consensus_14219#0
CCGAGCTCCTCAAGCTCTCTCTCTCTTCCTCAAGACCGGCTGCCGCCATCGTCGGCCGAT
CTCCCTCACCGGAGCTCCACAAGACAAATCCTTGCACCACTAGCTTCACCTCACTCCGGC
GAATCCATTTTACCCATTTACCCCTTCTCTCCCACCTCAAATCAAGCCACTACCACCACT
CTTCTTGCTGCCGCGGCCAAGATCTTGCCGCCGCCGTTCCGGCCATTCTCCTCTCTCCCT
ATGCCTTCCTCCACCTTCCTCGGGTGCGCGTCAGTCGGGAACACCACCGGCCGCAGACGT
CGCCGATCCTCGGCCACCGGAGCACCGACGCCCTTCTCCCTCCCTCTCCTCTGTACTCGG
CTGGAAGGAGAAGAGAGGAAGAAGAAGACGAGAAAAAGAGGTTGAAGGAACACCTGACAG
TGGGCCCCACTTTTATAAAATATTGTGCTAACAAGAAGATCAGAAGGAAGCGAGGTCTAC
AACAACGACGAGTTTATCTAGGCTAGTCTACACTCGAGCGTTTGCCTGTGGAGTTCTTTG
GAGTGTACTAGTTGTAATTCTAGTAGTTAAAGAGTTTAGGAGTTTAATACTTTGGATTTT
CTTGTATTTCAAATAAGGATATATTAGTTTGGATCTTTTCACCCTTTAAAAAAAAAAAAA
AAAAACACTCACTGTCATGCCCGTTACGTAGCGTAT

consensusID : consensus_14219#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 611
fasta sequence

                              [GAACACCACCGGCCGCAGACGTCGCCGATCCTCGGCCACCGGAGCACCGACGCCCTTTTCCCTCCCTTTCCTTTGTACTCGGGTGGAAGGAGAAGAGAGGAAGAAGAAGCCGAGAAAAAGAGGTTGAAGGAACCCCTGACAGTGGGCCCCACTTTTATAAAATATTGTGCTAACAAGAAGATCAGAAGGAAGCGAGGTTTACAACAACGACGAGTTTATTTAGGTTAGTTTACACTCGAGCGTTTGCCTGTGGAGTTCTTTGGAGTGTACTAGTTGTAATTCTAGTAGTTAAAGAGTTTAGGAGTTTAATACTTTGGATTTTCTTGTATTTCAAATAAGGATATATTGGTTTGGATCTTTTCACCCTTTAACAGTTGTATAATTAGCATGTATAAACAAATTTGTGTAAATAATCGAAAGCTGTTCTGTAAATCAATCTGTGCGTGATCGAAATCCTGGACGATCACGAGTGGATTTTCGGGGCCCCAAGCTTAAATTGGGTGTTCCCCCAGATTTGGAATGAAATATCGCGAGCTGAGTAAAGTTCATATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAATCATGCCGTTACG]

[-] EMBL CF321127             [GAACACCACCGGCCGCAGACGTCGCCGATCCTCGGCCACCGGAGCACCGACGCCCTTTTCCCTCCCTTTCCTTTGTACTCGGGTGGAAGGAGAAGAGAGGAAGAAGAAGCCGAGAAAAAGAGGTTGAAGGAACCCCTGACAGTGGGCCCCACTTTTATAAAATATTGTGCTAACAAGAAGATCAGAAGGAAGCGAGGTTTACAACAACGACGAGTTTATTTAGGTTAGTTTACACTCGAGCGTTTGCCTGTGGAGTTCTTTGGAGTGTACTAGTTGTAATTCTAGTAGTTAAAGAGTTTAGGAGTTTAATACTTTGGATTTTCTTGTATTTCAAATAAGGATATATTGGTTTGGATCTTTTCACCCTTTAACAGTTGTATAATTAGCATGTATAAACAAATTTGTGTAAATAATCGAAAGCTGTTCTGTAAATCAATCTGTGCGTGATCGAAATCCTGGACGATCACGAGTGGATTTTCGGGGCCCCAAGCTTAAATTGGGTGTTCCCCCAGATTTGGAATGAAATATCGCGAGCTGAGTAAAGTTCATATTTAAAAAAAAAAAAAAAAAAAAAAAAA                                 ]
[-] EMBL CF331383             [                                                                                                GAGGAAGAAGAAGCCGAGAAAAAGAGGTTGAAGGAACACCTGACAGTGGGCCCCACTTTTATAAAATATTGTGCTAACAAGAAGATCAGAAGGAAGCGAGGTTTACAACAACGACGAGTTTATTTAGGGTAGTTTACACTCGAGCGTTTGCCTGTGGAGTTCTTTGGAGTGTACTAGTTGTAATTTTAGTAGTTAAAGAGTTTAGGAGTTTAAAACTTTGGATTTTCTTGTATTTCAAATAAGGATATATTAGTTTGGATCTTTTCACCCTTTAACAGTTGTATAATTAGCATGTATAAACAAATTTGTGTAAATAATCGAAAGCTGTTCTGTATATCAATCTGAGAAAGATCGAAATCCTGGACGATCACGAGTGGATTTTCGGGGCCCCAAGCTTAAATTGGGTGTTCCCCCAGATTTGGAATGAAATATCGCGAGCTGAGTAAAGTTCATATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAATCATGCCGTTACG]




>consensus_14219#1
GAACACCACCGGCCGCAGACGTCGCCGATCCTCGGCCACCGGAGCACCGACGCCCTTTTC
CCTCCCTTTCCTTTGTACTCGGGTGGAAGGAGAAGAGAGGAAGAAGAAGCCGAGAAAAAG
AGGTTGAAGGAACCCCTGACAGTGGGCCCCACTTTTATAAAATATTGTGCTAACAAGAAG
ATCAGAAGGAAGCGAGGTTTACAACAACGACGAGTTTATTTAGGTTAGTTTACACTCGAG
CGTTTGCCTGTGGAGTTCTTTGGAGTGTACTAGTTGTAATTCTAGTAGTTAAAGAGTTTA
GGAGTTTAATACTTTGGATTTTCTTGTATTTCAAATAAGGATATATTGGTTTGGATCTTT
TCACCCTTTAACAGTTGTATAATTAGCATGTATAAACAAATTTGTGTAAATAATCGAAAG
CTGTTCTGTAAATCAATCTGTGCGTGATCGAAATCCTGGACGATCACGAGTGGATTTTCG
GGGCCCCAAGCTTAAATTGGGTGTTCCCCCAGATTTGGAATGAAATATCGCGAGCTGAGT
AAAGTTCATATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAATC
ATGCCGTTACG

consensusID : consensus_14219#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 518
fasta sequence

                              [ATCATTCGAATGTGCCGTACTCCCGGTTCTGGAGTTGTGTCATCAGGGTGATTCCTACTCCTGAAGTATAAGTAGTTTTAAAATTTTAAATGTTGATGATAAAGATGGTTTATGATTTTTTATTACTTCTTTACTTTACCATTGTTTTAGCTATTTATATCTATTTACACTTAATTATTTATAATATGTTTTGCTGAGTACATAAGTACTCACCTTTGCATAATTTGATATATAGATATTGTGCTAACAAGAAGATCAGAAGGAAGCGAGGTTTACAACAACGACGAGTTTATTTAGGCTAGTTTACACTCGAGCGTTTGCCTGTGGAGTTCTTTGGAGTGTACTAGTTGTAATTCTAGTAGTTAAAGAGTTTAGGAGTTTAATACTTTGGATTTTCTTGTATTTCAAATAAGGATATATTAGTTTGGATCTTTTCACCCTTTAGCAGTTGTATAATTAGCATGTATAAACAAATTTGTGTAAATAATCGAAAGCTGTTCTGTAAAAAAAAAAAAAAA]

[-] EMBL CF319530             [ATCATTCGAATGTGCCGTACTCCCGGTTCTGGAGTTGTGTCATCAGGGTGATTCCTACTCCTGAAGTATAAGTAGTTTTAAAATTTTAAATGTTGATGATAAAGATGGTTTATGATTTTTTATTACTTCTTTACTTTACCATTGTTTTAGCTATTTATATCTATTTACACTTAATTATTTATAATATGTTTTGCTGAGTACATAAGTACTCACCTTTGCATAATTTGATATATAGATATTGTGCTAACAAGAAGATCAGAAGGAAGCGAGGTTTACAACAACGACGAGTTTATTTAGGCTAGTTTACACTCGAGCGTTTGCCTGTGGAGTTCTTTGGAGTGTACTAGTTGTAATTCTAGTAGTTAAAGAGTTTAGGAGTTTAATACTTTGGATTTTCTTGTATTTCAAATAAGGATATATTAGTTTGGATCTTTTCACCCTTTAGCAGTTGTATAATTAGCATGTATAAACAAATTTGTGTAAATAATCGAAAGCTGTTCTGTAAAAAAAAAAAAAAA]




>consensus_14219#2
ATCATTCGAATGTGCCGTACTCCCGGTTCTGGAGTTGTGTCATCAGGGTGATTCCTACTC
CTGAAGTATAAGTAGTTTTAAAATTTTAAATGTTGATGATAAAGATGGTTTATGATTTTT
TATTACTTCTTTACTTTACCATTGTTTTAGCTATTTATATCTATTTACACTTAATTATTT
ATAATATGTTTTGCTGAGTACATAAGTACTCACCTTTGCATAATTTGATATATAGATATT
GTGCTAACAAGAAGATCAGAAGGAAGCGAGGTTTACAACAACGACGAGTTTATTTAGGCT
AGTTTACACTCGAGCGTTTGCCTGTGGAGTTCTTTGGAGTGTACTAGTTGTAATTCTAGT
AGTTAAAGAGTTTAGGAGTTTAATACTTTGGATTTTCTTGTATTTCAAATAAGGATATAT
TAGTTTGGATCTTTTCACCCTTTAGCAGTTGTATAATTAGCATGTATAAACAAATTTGTG
TAAATAATCGAAAGCTGTTCTGTAAAAAAAAAAAAAAA

consensusID : consensus_14219#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 485
fasta sequence

                              [AGCTGTGGGCATCGTGTGGGTAAAGCTGAACAGTCTCTGCAGAGGTGAATTAAATCATTCGAATGTGCCGTACTCCCGGTTCTGGAGTTGTGTCATCAGGGTGATTCCTACTCCTGAAGTATAAGTAGTTTTAAAAATTAAATGTTGAAGATAAAGATGACTTATGATTTTTTATTACTTCTTTACTTTATCATTGTTTTATCTATTCATATCTATTTACACTTAATTATTTATAATATGTTTTGCTGAGTACATAAGTACTCACCCTTGCATAATTTGACATATAGTAAAGCTAACACGAAGACTGGAAGGAAGCAAGATCTACGGCAACAACAAGTTTGTCTAGGCTAGTCTACACTCGAGCTTTTGCCTGTGGAGTTCTTCGGAGTTTATTGGTTGTAGTTTAATAATTTAGAGGTTTGGATTTTTCTTGTATTTTCAAATAAGGATATTTTCGTTTGGATCTTTTCACCCTTTAAAAAAAA]

[-] EMBL CF330384             [AGCTGTGGGCATCGTGTGGGTAAAGCTGAACAGTCTCTGCAGAGGTGAATTAAATCATTCGAATGTGCCGTACTCCCGGTTCTGGAGTTGTGTCATCAGGGTGATTCCTACTCCTGAAGTATAAGTAGTTTTAAAAATTAAATGTTGAAGATAAAGATGACTTATGATTTTTTATTACTTCTTTACTTTATCATTGTTTTATCTATTCATATCTATTTACACTTAATTATTTATAATATGTTTTGCTGAGTACATAAGTACTCACCCTTGCATAATTTGACATATAGTAAAGCTAACACGAAGACTGGAAGGAAGCAAGATCTACGGCAACAACAAGTTTGTCTAGGCTAGTCTACACTCGAGCTTTTGCCTGTGGAGTTCTTCGGAGTTTATTGGTTGTAGTTTAATAATTTAGAGGTTTGGATTTTTCTTGTATTTTCAAATAAGGATATTTTCGTTTGGATCTTTTCACCCTTTAAAAAAAA]




>consensus_14219#3
AGCTGTGGGCATCGTGTGGGTAAAGCTGAACAGTCTCTGCAGAGGTGAATTAAATCATTC
GAATGTGCCGTACTCCCGGTTCTGGAGTTGTGTCATCAGGGTGATTCCTACTCCTGAAGT
ATAAGTAGTTTTAAAAATTAAATGTTGAAGATAAAGATGACTTATGATTTTTTATTACTT
CTTTACTTTATCATTGTTTTATCTATTCATATCTATTTACACTTAATTATTTATAATATG
TTTTGCTGAGTACATAAGTACTCACCCTTGCATAATTTGACATATAGTAAAGCTAACACG
AAGACTGGAAGGAAGCAAGATCTACGGCAACAACAAGTTTGTCTAGGCTAGTCTACACTC
GAGCTTTTGCCTGTGGAGTTCTTCGGAGTTTATTGGTTGTAGTTTAATAATTTAGAGGTT
TGGATTTTTCTTGTATTTTCAAATAAGGATATTTTCGTTTGGATCTTTTCACCCTTTAAA
AAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14219#2      ------------------------------------------------------------
consensus_14219#3      ------------------------------------------------------------
consensus_14219#0      CCGAGCTCCTCAAGCTCTCTCTCTCTTCCTCAAGACCGGCTGCCGCCATCGTCGGCCGAT 60
consensus_14219#1      ------------------------------------------------------------
                                                                                   

consensus_14219#2      ------------------------------------------------------------
consensus_14219#3      ------------------------------------------------------------
consensus_14219#0      CTCCCTCACCGGAGCTCCACAAGACAAATCCTTGCACCACTAGCTTCACCTCACTCCGGC 120
consensus_14219#1      ------------------------------------------------------------
                                                                                   

consensus_14219#2      ------------------------------------------------------------
consensus_14219#3      --------------------------AGCTGTGGGCATCGTGTGGGTAAAGCTGAACAGT 34
consensus_14219#0      GAATCCATTTTACCCATTTACCCCTTCTCTCCCACCTCAAATCAAGCCACTACCACCACT 180
consensus_14219#1      ------------------------------------------------------------
                                                                                   

consensus_14219#2      -------------------ATCATTCGAATGTGCCGTACTCCCGGTTCTGGAGTTGTGTC 41
consensus_14219#3      CTCTGCAGAGGTGAATTAAATCATTCGAATGTGCCGTACTCCCGGTTCTGGAGTTGTGTC 94
consensus_14219#0      CTTCTTGCTGCCGCGGCCAAGATCTTGCCGCCGCCGTTCCGGCCATTCTCCTCTCTCCCT 240
consensus_14219#1      ------------------------------------------------------------
                                                                                   

consensus_14219#2      ATCAGGGTGATTCCTACTCCTGAAGTATAAGTAGTTTTAAAATTTTAAATGTTGATGATA 101
consensus_14219#3      ATCAGGGTGATTCCTACTCCTGAAGTATAAGTAGTTTTAAAAATT-AAATGTTGAAGATA 153
consensus_14219#0      AT-GCCTTCCTCCACCTTCCTCGGGTGCGCGTCAGTCGGGAACACCACCGGCCGCAGACG 299
consensus_14219#1      ---------------------------------------GAACACCACCGGCCGCAGACG 21
                                                               **    *   *  *  **  

consensus_14219#2      AAGATGGTTTATGATTTTT----TATTACTTCTTTACTTTACCATTGTTTTAGCTATTTA 157
consensus_14219#3      AAGATGACTTATGATTTTT----TATTACTTCTTTACTTTATCATTGTTTTATCTATTCA 209
consensus_14219#0      TCGCCGATCCTCGGCCACCGGAGCACCGACGCCCTTCTCCCTCCCTCTCCTCTGTACTCG 359
consensus_14219#1      TCGCCGATCCTCGGCCACCGGAGCACCGACGCCCTTTTCCCTCCCTTTCCTTTGTACTCG 81
                         *  *      *           *      *  *  *    *  * *  *   ** *  

consensus_14219#2      TATCTATTTACACTTAATTATTTATAATATGTTTTGCTGAGTACATAAGTACTCACCTTT 217
consensus_14219#3      TATCTATTTACACTTAATTATTTATAATATGTTTTGCTGAGTACATAAGTACTCACCCTT 269
consensus_14219#0      GCTGGAAGGAGAAGAGAGGAAGAAGAAGACGAGAAAAAGAGGTTGAAGGAACACCTGACA 419
consensus_14219#1      GGTGGAAGGAGAAGAGAGGAAGAAGAAGCCGAGAAAAAGAGGTTGAAGGAACCCCTGACA 141
                         *  *   * *    *  *   * **   *       ***     * * ** *      

consensus_14219#2      GCATAATTTGATAT-ATAGA-TATTGTGCTAACAAGAAGATCAGAAGGAAGCGAGGTTTA 275
consensus_14219#3      GCATAATTTGACAT-ATAG----TAAAGCTAACACGAAGACTGGAAGGAAGCAAGATCTA 324
consensus_14219#0      GTGGGCCCCACTTTTATAAAATATTGTGCTAACAAGAAGATCAGAAGGAAGCGAGGTCTA 479
consensus_14219#1      GTGGGCCCCACTTTTATAAAATATTGTGCTAACAAGAAGATCAGAAGGAAGCGAGGTTTA 201
                       *            * ***     *   ******* *****   ********* ** * **

consensus_14219#2      CAACAACGACGAGTTTATTTAGGCTAGTTTACACTCGAGCGTTTGCCTGTGGAGTTCTTT 335
consensus_14219#3      CGGCAACAACAAGTTTGTCTAGGCTAGTCTACACTCGAGCTTTTGCCTGTGGAGTTCTTC 384
consensus_14219#0      CAACAACGACGAGTTTATCTAGGCTAGTCTACACTCGAGCGTTTGCCTGTGGAGTTCTTT 539
consensus_14219#1      CAACAACGACGAGTTTATTTAGGTTAGTTTACACTCGAGCGTTTGCCTGTGGAGTTCTTT 261
                       *  **** ** ***** * **** **** *********** ****************** 

consensus_14219#2      GGAGTGTACTAGTTGTAATTCTAGTAGTTAAAGAGTTTAGGAGTTTAATACTTTGGATTT 395
consensus_14219#3      GGAGTTTATTGGTTGTAGTTT---------AATAATTTAGAGGTTTG-------GATTTT 428
consensus_14219#0      GGAGTGTACTAGTTGTAATTCTAGTAGTTAAAGAGTTTAGGAGTTTAATACTTTGGATTT 599
consensus_14219#1      GGAGTGTACTAGTTGTAATTCTAGTAGTTAAAGAGTTTAGGAGTTTAATACTTTGGATTT 321
                       ***** ** * ****** **          ** * *****  ****        *  ***

consensus_14219#2      TCTTGTATTT-CAAATAAGGATATATTAGTTTGGATCTTTTCACCCTTTAGCAGTTGTAT 454
consensus_14219#3      TCTTGTATTTTCAAATAAGGATATTTTCGTTTGGATCTTTTCACCCTTTAAAAAAAA--- 485
consensus_14219#0      TCTTGTATTT-CAAATAAGGATATATTAGTTTGGATCTTTTCACCCTTTAAAAAAAAAAA 658
consensus_14219#1      TCTTGTATTT-CAAATAAGGATATATTGGTTTGGATCTTTTCACCCTTTAACAGTTGTAT 380
                       ********** ************* ** **********************  *       

consensus_14219#2      AATTAG-CATGTATAAACAAATTTGTGTAAATAATCGAAAGCTGTTCTGTAAAAAAAAAA 513
consensus_14219#3      ------------------------------------------------------------
consensus_14219#0      AAAAAAACACTCACTGTCATGCCCGT-TACGTAGCGTAT--------------------- 696
consensus_14219#1      AATTAG-CATGTATAAACAAATTTGTGTAAATAATCGAAAGCTGTTCTGTAAATCAATCT 439
                                                                                   

consensus_14219#2      AAAAA------------------------------------------------------- 518
consensus_14219#3      ------------------------------------------------------------
consensus_14219#0      ------------------------------------------------------------
consensus_14219#1      GTGCGTGATCGAAATCCTGGACGATCACGAGTGGATTTTCGGGGCCCCAAGCTTAAATTG 499
                                                                                   

consensus_14219#2      ------------------------------------------------------------
consensus_14219#3      ------------------------------------------------------------
consensus_14219#0      ------------------------------------------------------------
consensus_14219#1      GGTGTTCCCCCAGATTTGGAATGAAATATCGCGAGCTGAGTAAAGTTCATATTTAAAAAA 559
                                                                                   

consensus_14219#2      ----------------------------------------------------
consensus_14219#3      ----------------------------------------------------
consensus_14219#0      ----------------------------------------------------
consensus_14219#1      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAATCATGCCGTTACG 611