These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14226#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1444 fasta sequence [GGCCGAATAGACGATTGAACAACAGGCCGAAGAAACCAAAAATGGTGTAGCCTGAAG--GTGAAGCTGTCA-AGCACC--CAAATGGCGGCGCCGGTGAGGTCGGTCCTCCCCGTCGTCCTCCTCGGCTGCGGCGGCGTCGGCCGCCACCTTCTCCGCCACATCGTCTCCTGCCGCCCGCTCCACGCCAACCAGGGCGTCGCCATCCGGGTGCTCGGCGTCGCCGACAGCTCCTCTCTGCTCGTCGCCGACGACCTCCACTCCAACGGCTTCGACGACGCGCTCCTCGCTGATCTCTGCGCCGCCAAGTCCGCCGGCTCGCCCCTATCTTCCCTGCTCGCTCGAGGGCAATGTCAGCTATTCAACAACACTGAGGCTAGGAGGAAAGTCATTGACACTGCCAGCGTTCTAGGGAAAACAACTGGTCTTGTACTAGTTGATTGTTCTGCAACTTATGATACTGTTGGCATGCT-AAAGGATGCCGTGGATTGTGGATGTTGTGTTGTATTGGCAAACAAGAAACCGCTTACTTGTGCTTATGAGGATTTCGAAAAGTTGGTCTCCAACTTCCGTCGCATAAGATTTGAATCTACTGTTGGAGCCAGTCTGCCTGTAATAGCTTCTGTGACTCGTATTATTGCCTCTGGAGATCCAGTTTCTCGTATTGTTGGCAGTCTGAGTGGTACACTTGGTTATGTGATGAGTGAGCTGGAGGATGGAAAGAAATTTAGTGAAGTTGTGAAAACTGCCAAGTCTCTTGGCTATACAGAACCAGATCCACGTGATGATCTCAGTGGGATGGACGTAGCTAGAAAGGCATTGATCTTAGCTAGGCTTCTGGGGCAACAGATTAGCATGGAGAATATTAATGTTGAGAGTTTATACCCCAGTGAATTAGGACCTGATGCAATGTCCACAAAGGACTTCCTTGAAAGTGGTTTAGTACAGCTTGATAAAAGCATTGAAGAAAGAGTAAAGGCAGCATCTTTGAAAGGAAATGTTCTTCGCTATGTCTGTAAGATTGAAAGCACAGGGTGCCAAGTGGGCCTTGAAGAACTCCCGAAAAACTCTGCACTGGGAAGGTTGAGAGGAAGTGACAATGTGGTGGAGATATACAGCAGATGCTACGAGAGCGCCCCTCTGGTGATTCAGGGCGCTGGAGCTGGCAATGATACCACTGCAGCTGGAGTTCTTGCTGACATACTTGATCTCCAGGATCTCTTCCACAAAACGGCTTGAAATCTATGTCTTGTAGGTCGAACCGCAGAGTTGATTATGAGTCTTGTGACTTGTGGGGTTGTTTTGGTCACAGTATTACTTAAATAAATCTT--GAGCAG--ATATCAATTTTTGTACTGTACGCAGAAGGTTTTTGAACAAATTTGGAAGTTGGAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK071434 [GGCCGAATAGACGATTGAACAACAGGCCGAAGAAACCAAAAATGGTGTAGCCTGAAG GTGAAGCTGTCA AGCACC CAAATGGCGGCGCCGGTGAGGTCGGTCCTCCCCGTCGTCCTCCTCGGCTGCGGCGGCGTCGGCCGCCACCTTCTCCGCCACATCGTCTCCTGCCGCCCGCTCCACGCCAACCAGGGCGTCGCCATCCGGGTGCTCGGCGTCGCCGACAGCTCCTCTCTGCTCGTCGCCGACGACCTCCACTCCAACGGCTTCGACGACGCGCTCCTCGCTGATCTCTGCGCCGCCAAGTCCGCCGGCTCGCCCCTATCTTCCCTGCTCGCTCGAGGGCAATGTCAGCTATTCAACAACACTGAGGCTAGGAGGAAAGTCATTGACACTGCCAGCGTTCTAGGGAAAACAACTGGTCTTGTACTAGTTGATTGTTCTGCAACTTATGATACTGTTGGCATGCT AAAGGATGCCGTGGATTGTGGATGTTGTGTTGTATTGGCAAACAAGAAACCGCTTACTTGTGCTTATGAGGATTTCGAAAAGTTGGTCTCCAACTTCCGTCGCATAAGATTTGAATCTACTGTTGGAGCCAGTCTGCCTGTAATAGCTTCTGTGACTCGTATTATTGCCTCTGGAGATCCAGTTTCTCGTATTGTTGGCAGTCTGAGTGGTACACTTGGTTATGTGATGAGTGAGCTGGAGGATGGAAAGAAGTTTAGTGAAGTTGTGAAAACTGCCAAGTCTCTTGGCTATACAGAACCAGATCCACGTGATGATCTCAGTGGGATGGACGTAGCTAGAAAGGCATTGATCTTAGCTAGGCTTCTGGGGCAACAGATTAGCATGGAGAATATTAATGTTGAGAGTTTATACCCCAGTGAATTAGGACCTGATGCAATGTCCACAAAGGACTTCCTTGAAAGTGGTTTAGTACAGCTTGATAAAAGCATTGAAGAAAGAGTAAAGGCAGCATCTTTGAAAGGAAATGTTCTTCGCTATGTCTGTAAGATTGAAAGCACAGGGTGCCAAGTGGGCCTTGAAGAACTCCCGAAAAACTCTGCACTGGGAAGGTTGAGAGGAAGTGACAATGTGGTGGAGATATACAGCAGATGCTACGAGAGCGCCCCTCTGGTGATTCAGGGCGCTGGAGCTGGCAATGATACCACTGCAGCTGGAGTTCTTGCTGACATACTTGATCTCCAGGATCTCTTCCACAAAACGGCTTGAAATCTATGTCTTGTAGGTCGAACCGCAGAGTTGATTGTGAGTC GTGACTTGTGGGGTTCTTTTGGTCACAGTATTACCTAAATAAATCTT GAGCAGACATATCCATTTTTGTACTGTACGCAGAAGGTTTTTGAACAAATTTGGA ] [+] EMBL C26583 [ GAAGCTGTGAAGC ACCAGTGCCCCAACAAATGGCGGCGCCGGTGAGGTCGGTGCTCCCCGTCGTGCTCCTCGGCTGCGGCGGCGTCGGCCGCANCCTCCTCCGCCACATCCTCTCCTGCCGCCCTCTCCACGCCAACCAGGGCGTCGCCATCCGGGTGCTCGGCGTCGCCGACAGCTCCTCTCTGCTCGTCGCCGACGACCTCCACTCCAACGGCTTCGACGACGCGCTCCTCGCTGATCTCTGCGCCGCCAAGTCCGCCGGCTCGCCCTTATCTTCTCTGCTCTCTCGAGGGCAATGTCAGCTATTCAACAACCCTGAGGCTAGGAGGAAAGTCATTGACACTGCCAGCGTTCTTGGGAAAACAACTGGTCTTGTACTAGTTGATTGTTCTGCAACTTATGATACTGTTGGNATGCTAAAAGGATGCCGTGGATCGTGGATGTTGTGTTGAATTGG AAANAAGAAACCGGTTACTTGTG TTATn ] [+] EMBL CB681606 [ TGCGCCTTCGTCGGCCGCCACCTTCTCCGCCACATCGTCTCCTGCCGCCCGCTCCACGCCAACCAGGGCGTCGCCATCCGGGTGCTCGGCGTCGCCGACAGCTCCTCTCTGCTCGTCGCCGACGACCTCCACTCCAACGGCTTCGACGACGCGCTCCTCGCTGATCTCTGCGCCGCCAAGTCCGCCGGCTCGCCCCTATCTTCCCTGCTCGCTCGAGGGCAATGTCAGCTATTCAACAACACTGAGGCTAGGAGGAAAGTCATTGACACTGCCAGCGTTCTAGGGAAAACAACTGGTCTTGTACTAGTTGATTGTTCTGCAACTTATGATACTGTTGGCATGCT AAAGGATGCCGTGGATTGTGGATGTTGTGTTGTATTGGCAAACAAGAAACCGCTTACTTGTGCTTATGAGGATTTCGAAAAGTTGGTCTCCAACTTCCGTCGCATAAGATTTGAATCTACTGTTGGAGCCAGTCTGCCTGTAATAGCTTCTGTGACTCGTATTATTGCCTCTGGAGATCCAGTTTCTCGTATTGTTGGCAGTCTGAGTGGTACACTTGGTTATGTGATGAGTGAGCTGGAGGATGGAAAGAAATTTAGTGAAGTTGTGAAAACTGCCAAGTCTCTTGGCTATACAGAACCAGATCCACGTGATGATCTCAGTGGGATGGACGTAGCTAGAAAGGCATTGATCTTAGCTAGGCTTCTGGGGCAACAGATTAGCATGGAGAAT ] [-] EMBL CB681607 [ GAATCTACTGTTGGAGCCAGTCTGCCTGTAATAGCTTCTGTGACTCGTATTATTGCCTCTGGAGATCCAGTTTCTCGTATTGTTGGCAGTCTGAGTGGTACACTTGGTTATGTGATGAGTGAGCTGGAGGATGGAAAGAAATTTAGTGAAGTTGTGAAAACTGCCAAGTCTCTTGGCTATACAGAACCAGATCCACGTGATGATCTCAGTGGGATGGACGTAGCTAGAAAGGCATTGATCTTAGCTAGGCTTCTGGGGCAACAGATTAGCATGGAGAATATTAATGTTGAGAGTTTATACCCCAGTGAATTAGGACCTGATGCAATGTCCACAAAGGACTTCCTTGAAAGTGGTTTAGTACAGCTTGATAAAAGCATTGAAGAAAGAGTAAAGGCAGCATCTTTGAAAGGAAATGTTCTTCGCTATGTCTGTAAGATTGAAAGCACAGGGTGCCAAGTGGGCCTTGAAGAACTCCCGAAAAACTCTGCACTGGGAAGGTTGAGAGGAAGTGACAATGTGGTGGAGATATACAGCAGATGCTACGAGAGCGCCCCTCTGGTGATTCAGGGCGCTGGAGCTGGCAATGATACCACTGCAGCTGGAGTTCTTGCTGACATACTTGATCTCCAGGATCTCTTCCACAAAACGGCTTGAAATCTATGTCTTGTAGGTCGAACCGCAGAGTTGATTGTGAGTC GTGACTTGTGGGGTTCTTTTGGTCACAGTATTACCTAAATAAATCTTAAGGGGAC ATATCCATTTTTGTACTG ] [-] EMBL AW070042 [ gccgaGGTACACTTGGTTATGTGATGAGTGAGCTGGAGGATGGAAAGAAATTTAGTGAAGTTGTGAAAACTGCCAAGTCTCTTGGCTATACAGAACCAGATCCACGTGATGACCTCAGTGGGATGGACGTAGCTAGAAAGGCATTGATCTTAGCTAGGCTTCTGGGGCAACAGATTAGCATGGAGAATATTAATGTTGGGAGTTTATACCCCAGTGAATTAGGACATAATGCAATGTCCACAAAGGACTTCCTTGAAAGT ] [-] EMBL AW069905 [ gccgaGGTACACTTGGTTATGTGATGAGTGAGCTGGAGGATGGAAAGAAATTTAGTGAAGTTGTGAAAACTGCCAAGTCTCTTGGCTATACAGAACCAGACCCACGTGATGATCTCAGTGGGATGGACGTAGCTAGAAAGGCATTGATCTTAGCTAGGCTTCTGGGGCAACAGATTAGCATGGAGAATATTAATGTTGAGAGTTTATACCCCAGTGAATTAGGACCTGATGCAATGTCCACAAAGGACTTCCTTGAAAGT ] [+] EMBL AU198063 [ AGTAAAGGCAGCATCTTTGAAAGGAAATGTTCTTCGCTATGTCTGTAAGATTGAAAGCACAGGGTGCCAAGTGGGCCTTGAAGAACTCCCGAAAAACTCTGCACTGGGAAGGTTGAGAGGAAGTGACAATGTGGTGGAGATATACAGCAGATGCTACGAGAGCGCCCCTCTGGTGATTCAGGGCGCTGGAGCTGGCAATGATACCACTGCAGCTGGAGTTCTTGCTGACATACTTGATCTCCAGGATCTCTTCCACAAAACGGCTTGAAACCTATGTCTTNTAGGTCGAACCGCAGAGTTGATTATGAGTCTTGTGACTTGTGGGGTTGTTTTGGTCACAGTATTACTTAAATAAATCTT GAGCAG ATATCAATTTTTGTACTGTACGCAGAAGGTTTTTGAACAAATTTGGAAGTTGGAACCAAAAAAAAAAAA ] [+] EMBL AU095980 [ GAGTTCTTGCTGACATACTTGATCTCCAGGATCTCTTCCNCAAAACGGCTTGAAACCTATGTCTTCTAGGTCGAACCNCAGAGTTGATTATGAGTCTTGTGACTTGTGGGGTTGTTTTGGTCNCAGTATTACTTAAATAAATCTT GNGCAG ATNTCAATTTTTGTACTGTACGCAGAAGGTTTTTGAACAAATTTGGAAGTTGGAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU100746 [ tnTAGGTCGAACCGCAGAGTTGATTATGAGTCTTGTGACTTGTGGGGTTGTTTTGGTCACAGTATTACTTAAATAAATCTT GAGCAG ATATCAATTTTTGTACTGTACGCAGAAGGTTTTTGAANAAATTTGGAAGTTGGAACCAAAAAAAA ] consensusID : consensus_14226#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1377 fasta sequence [GGGTGGTTAATTTGTTTTTGTTTTAGGTAATGCACATTTGTGTAGCCAACAAATGGCGGCGCCGGTGAGGTCGGTGCTCCCCGTCGTGCTCCTCGGCTGCGGCGGCGTCGGCCGCCACCTCCTCCGCCACATCCTCTCCTGCCGCCCTCTCCACGCCAACCAGGGCGTCGCCATCCGGGTGCTCGGCGTCGCCGACAGCTCCTCTCTGCTCGTCGCCGACGACCTCCACTCCAACGGCTTCGACGACGCGCTCCTCGCTGATCTCTGCGCCGCCAAGTCCGCCGGCTCGCCCTTATCTTCTCTGCTCTCTCGAGGGCAATGTCAGCTATTCAACAACCCTGAGGCTAGGAGGAAAGTCATTGACACTGCCAGCGTTCTTGGGAAAACAACTGGTCTTGTACTAGTTGATTGTTCTGCAACTTATGATACTGTTGGCATGCTAAAGGATGCCGTGGATCGTGGATGTTGTGTTGTATTGGCAAACAAGAAACCGCTTACTTGTGCTTATGAGGATTTCGAAAAGTTGGTTTCCAACTTCCGTCGCATGAGATTTGAATCTACTGTTGGAGCCGGTTTGCCTGTAATAGCTTCTGTGACCCGTATTATTGCCTCTGGAGATCCAGTTTCTCGTATTGTTGGCAGTCTGAGTGGTACACTTGGTTATGTGATGAGTGAGCTGGAGGATGGAAAGAGA-TTTAGTGAAGTTGTGAAAACTGCCAAGTCTCTTGGCTATACAGAACCAGATCCAC-GTGATGATCTCAGTGGGATGGACGTAGCTA-GAAAGGCATTGATCTTAGCTAGGCTTCTGGGGCAACGGATCAGCATGGAGAATATTAATGTTGAGGGTTTATACCCCAGTGAATTTGGACCTGATGCAATGTCCACAAAGGACTTCCTTGAAAGTGGTTTAGTACAGCTTGATAAAAGCATTGAAGAAAGAGTAAAGGCAGCATCTTTGAAAGGAAATGTTCTTCGCTATGTCTGTAAGATTGAAAGCACAGGGTGCCAAGTGGGCCTTGAAGAACTCCCGAAAAACTCTGCACTGGGAAGGTTGAGAGGAAGTGACAATGTGGTGGAGATATACAGCAGATGCTACGAGAGCGCCCCTCTGGTGATTCAGGGCGCTGGAGCTGGCAATGATACCACTGCAGCTGGAGTTCTTGCTGACATACTTGATCTCCAGGATCTCTTCCACAAAACGGCTTGAAACCTATGTCTTCTAGGTCGAACCGCAGAGTTGATTATGAGTCTTGTGACTTGTGGGGTTGTTTTGGTCACAGTATTACTTAAATAAATCTTGAGCAGATATCAATTTTTGTACTGTACGCAGAAGGTTTTTGAACAAATTTGGAAGTTGGAACCAATGAGCAGTGACAT] [+] EMBL AK062006 [GGGTGGTTAATTTGTTTTTGTTTTAGGTAATGCACATTTGTGTAGCCAACAAATGGCGGCGCCGGTGAGGTCGGTGCTCCCCGTCGTGCTCCTCGGCTGCGGCGGCGTCGGCCGCCACCTCCTCCGCCACATCCTCTCCTGCCGCCCTCTCCACGCCAACCAGGGCGTCGCCATCCGGGTGCTCGGCGTCGCCGACAGCTCCTCTCTGCTCGTCGCCGACGACCTCCACTCCAACGGCTTCGACGACGCGCTCCTCGCTGATCTCTGCGCCGCCAAGTCCGCCGGCTCGCCCTTATCTTCTCTGCTCTCTCGAGGGCAATGTCAGCTATTCAACAACCCTGAGGCTAGGAGGAAAGTCATTGACACTGCCAGCGTTCTTGGGAAAACAACTGGTCTTGTACTAGTTGATTGTTCTGCAACTTATGATACTGTTGGCATGCTAAAGGATGCCGTGGATCGTGGATGTTGTGTTGTATTGGCAAACAAGAAACCGCTTACTTGTGCTTATGAGGATTTCGAAAAGTTGGTTTCCAACTTCCGTCGCATGAGATTTGAATCTACTGTTGGAGCCGGTTTGCCTGTAATAGCTTCTGTGACCCGTATTATTGCCTCTGGAGATCCAGTTTCTCGTATTGTTGGCAGTCTGAGTGGTACACTTGGTTATGTGATGAGTGAGCTGGAGGATGGAAAGAGA TTTAGTGAAGTTGTGAAAACTGCCAAGTCTCTTGGCTATACAGAACCAGATCCAC GTGATGATCTCAGTGGGATGGACGTAGCTA GAAAGGCATTGATCTTAGCTAGGCTTCTGGGGCAGCGGATCAGCATGGAGAATATTAATGTTGAGGGTTTATACCCCAGTGAATTTGGACCTGATGCAATGTCCACAAAGGACTTCCTTGAAAGTGGTTTAGTACAGCTTGATAAAAGCATTGAAGAAAGAGTAAAGGCAGCATCTTTGAAAGGAAATGTTCTTCGCTATGTCTGTAAGATTGAAAGCACAGGGTGCCAAGTGGGCCTTGAAGAACTCCCGAAAAACTCTGCACTGGGAAGGTTGAGAGGAAGTGACAATGTGGTGGAGATATACAGCAGATGCTACGAGAGCGCCCCTCTGGTGATTCAGGGCGCTGGAGCTGGCAATGATACCACTGCAGCTGGAGTTCTTGCTGACATACTTGATCTCCAGGATCTCTTCCACAAAACGGCTTGAAACCTATGTCTTCTAGGTCGAACCGCAGAGTTGATTATGAGTCTTGTGACTTGTGGGGTTGTTTTGGTCACAGTATTACTTAAATAAATCTTGAGCAGATATCAATTTTTGTACTGTACGCAGAAGGTTTTTGAACAAATTTGGAAGTTGGAACCAATGAGCAGTGACAT] [+] EMBL OSS15196A [ GACACTGCCAGCGTTCTTGGGAAAACAACTGGTCTTGTACTAGTTGATTGTTCTGCAACTTATGATACTGTTGGCATGCTAAAGGATGCCGTGGATCGTGGATGTTGTGTTGTATTGGCAAACAAGAAACCGCTTACTTGTGCTTATGAGGATTTCGAAAAGTTGGTTTCCAACTTCCGTCGCATGAGATTTGAATCTACTGTTGGAGCCGGTTTGCCTGTAATAGCTTCTGTGACCCGTATTATTGCCTCTGGAGATCCAGTTTCTCGTATTGTTGGCAGTCTGAGTGGTACACTTGGTTATGTGATGAGTGAGCTGGAGGATGGAAAGAGA TTTAGTGAAGTTGTGAAAACTGCCAAGTCTCTTGGCTATACAGAACCAGATCCACGGTGATGATCTCAGTGGGATGGACGGAGCTAGGAAGGGCATTGATCTTAGCTAGGCTTCTGGGGCAACGGNTCAACATGGNG ATAT ] [+] EMBL AU065815 [ AAGGATGCCGTGGATCGTGGATGTTGTGTTGTATTGGCAAACAAGAAACCGCTTACTTGTGCTTATGAGGATTTCGAAAAGTTGGTTTCCAACTTCCGTCGCATGAGATTTGAATCTACTGTTGGAGCCGGTTTGCCTGTAATAGCTTCTGTGACCCGTATTATTGCCTCTGGAGATCCAGTTTCTCGTATTGTTGGCAGTCTGAGTGGTACACTTGGTTATGTGATGAGTGAGCTGGAGGATGGAAAGAGA TTTAGTGAAGTTGTGAAAACTGCCAAGTCTCTTGGCTATACAGAACCAGATCCAC GTGATGATCTCAGTGGGATGGACGTAGCTA GAAAGGCA TGATC TAGCTAGGCTTCTGGGGCAACGGATCAGCATGGAGAA ] [+] EMBL OSS11917A [ AAGGATGCCGTGGATCGTGGATGTTGTGTTGTATTGGCAAACAAGAAACCGCTTACTTGTGCTTATGAGGATTTCGAAAAGTTGGTTTCCAACTTCCGTCGCATGANATTTGAATCTACTGNTGGAGCCGGTTTGCCTGTAATAGCTTCTGTGACCCGTATTATTGCCTCTGGAGATCCAGTTTCTCGTATTGTTGGCAGTCTGAGTGGTACA TTGGTTATGTGATGAGTGAGCTGGAGGATGGAAAGAGA TTTAGTGAAGTTGTGAAAACTGCCAAGTCTCTTGGCTATACAGAACCAGATCCAC GTGATGATCTCAGTGGGATGGACGTAGCTA GAAAGGCATTGATCTTAGCTAGGCTTCTGGGGCAACGGA ] [+] EMBL AU083467 [ CTGAAGGATGGAAAGAGATTTTAGTGAAGTTGTGAAAACTGCCAAGTCTCTTGGCTATNCAG ACCAGATCCAC GTGATGATCTCAGTGGGATGGACGTAGCTA GAAAGGCATTGATCTTAGCTAGGCTTCTGGGGCAACGGATCAGCATGGAGAATATTAATGTTGAGAGTTTATACCCCAGTGAATTTGGACCTGATGCAATGTCCACAAAGGACTTCCTTGAAAGTGGTTTAGTACAGCTTGATAAAAGCATTGAAGAAAGAGTAAAGGCAGCATCTTTGAAAGGAAATGTTCTTCGCTATGTCTGTAAGATTGAAAGCACAGGGTGCCAAGTGGGCCTTGAAGAACTCCCGAAAAACTCTGCACTGGGAAGGTTGAGAGGAAGTGACAATGTGGTGGAGATATACAGCAGATGCTACGAGAGCGCCCCTCTGGTGATTCAGGGCGCTGGAGCTGGCAATGATACCACTGCAGCTGGAGTTCTTGCTGACATACTTGATCTCCAGGATCTCTTCCACAAAACGGCTTGAAACCTATGTCTTCTAGGTCGAACCGCAGAGTTGATTATGAGTCTTGTGACTTGTGGGGTTGTTTTGGTCACAGTATTACTTAAATAAATCTTGAGCAGATATCAATTTTTGTACTGTACGCAGAAGGTTTTTGAACAAAaa ] consensusID : consensus_14226#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 440 fasta sequence [TCCCCATCGTNCTCCNNGGCTGCNGCNGCGTCGCACCCNNNACTCNACCACATCCTCTCCTNCCGCCCTCNNCACNCCAACCANGGCTCGCATCCGGGTGCTCNGCGTCGCCNANGCTCCTCTCTGCTCGTCGCCGAGACCTCCACTCCAACGGCTTCGACGACGCGCTCCTCGCTGATCTCTGCGCCGCCAAGTCCGCCGGCTCGCCTTATCTTCTCTGCTCTCTCGAGGGCAATGTCAGCTATTCAACAACCCTGAGGCTAGGAGGGAAAGTCATTGACACTTGCCAGCGTTCTTGGGGAAAACAACTNGGTCTTGTACTAGTTGATTGTTCTGCAACTTATGATACTGTTGGCATGCTTAAAGGTGCNGTGGATCGTGGGATGTTGTANTTTATTGGCAACAAGGAACCCGCTTAATTNGTGCTTATAGGGATTTCG] [+] EMBL C99385 [TCCCCATCGTNCTCCNNGGCTGCNGCNGCGTCGCACCCNNNACTCNACCACATCCTCTCCTNCCGCCCTCNNCACNCCAACCANGGCTCGCATCCGGGTGCTCNGCGTCGCCNANGCTCCTCTCTGCTCGTCGCCGAGACCTCCACTCCAACGGCTTCGACGACGCGCTCCTCGCTGATCTCTGCGCCGCCAAGTCCGCCGGCTCGCCTTATCTTCTCTGCTCTCTCGAGGGCAATGTCAGCTATTCAACAACCCTGAGGCTAGGAGGGAAAGTCATTGACACTTGCCAGCGTTCTTGGGGAAAACAACTNGGTCTTGTACTAGTTGATTGTTCTGCAACTTATGATACTGTTGGCATGCTTAAAGGTGCNGTGGATCGTGGGATGTTGTANTTTATTGGCAACAAGGAACCCGCTTAATTNGTGCTTATAGGGATTTCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14226#0 GGCCGAATAGACGATTGAACAACAGGCCGAAGAAACCAAAAATGGTGTAGCCTGAAGGTG 60 consensus_14226#1 ------------------------GGGTGGTTAATTTGTTTTTGTTTTAGGT--AATGCA 34 consensus_14226#2 ------------------------------------------------------------ consensus_14226#0 AAGCTGTCAAGCACCCAAATGGCGGCGCCGGTGAGGTCGGTCCTCCCCGTCGTCCTCCTC 120 consensus_14226#1 CATTTGTGTAGCCAACAAATGGCGGCGCCGGTGAGGTCGGTGCTCCCCGTCGTGCTCCTC 94 consensus_14226#2 -------------------------------------------TCCCCATCGTNCTCCNN 17 ***** **** **** consensus_14226#0 GGCTGCGGCGGCGTCGGCCGCCACCTTCTCCGCCACATCGTCTCCTGCCGCCCGCTCCAC 180 consensus_14226#1 GGCTGCGGCGGCGTCGGCCGCCACCTCCTCCGCCACATCCTCTCCTGCCGCCCTCTCCAC 154 consensus_14226#2 GGCTGCNGCNGCGTCG--CACCCNNNACTCNACCACATCCTCTCCTNCCGCCCTCNNCAC 75 ****** ** ****** * ** *** ******* ****** ****** * *** consensus_14226#0 GCCAACCAGGGCGTCGCCATCCGGGTGCTCGGCGTCGCCGACAGCTCCTCTCTGCTCGTC 240 consensus_14226#1 GCCAACCAGGGCGTCGCCATCCGGGTGCTCGGCGTCGCCGACAGCTCCTCTCTGCTCGTC 214 consensus_14226#2 NCCAACCANGGC-TCGC-ATCCGGGTGCTCNGCGTCGCCNAN-GCTCCTCTCTGCTCGTC 132 ******* *** **** ************ ******** * ***************** consensus_14226#0 GCCGACGACCTCCACTCCAACGGCTTCGACGACGCGCTCCTCGCTGATCTCTGCGCCGCC 300 consensus_14226#1 GCCGACGACCTCCACTCCAACGGCTTCGACGACGCGCTCCTCGCTGATCTCTGCGCCGCC 274 consensus_14226#2 GCCGA-GACCTCCACTCCAACGGCTTCGACGACGCGCTCCTCGCTGATCTCTGCGCCGCC 191 ***** ****************************************************** consensus_14226#0 AAGTCCGCCGGCTCGCCCCTATCTTCCCTGCTCGCTCGAGGGCAATGTCAGCTATTCAAC 360 consensus_14226#1 AAGTCCGCCGGCTCGCCCTTATCTTCTCTGCTCTCTCGAGGGCAATGTCAGCTATTCAAC 334 consensus_14226#2 AAGTCCGCCGGCTCGCC-TTATCTTCTCTGCTCTCTCGAGGGCAATGTCAGCTATTCAAC 250 ***************** ******* ****** ************************** consensus_14226#0 AACACTGAGGCTAGGAGG-AAAGTCATTGACACT-GCCAGCGTTCTAGGG-AAAACAACT 417 consensus_14226#1 AACCCTGAGGCTAGGAGG-AAAGTCATTGACACT-GCCAGCGTTCTTGGG-AAAACAACT 391 consensus_14226#2 AACCCTGAGGCTAGGAGGGAAAGTCATTGACACTTGCCAGCGTTCTTGGGGAAAACAACT 310 *** ************** *************** *********** *** ********* consensus_14226#0 GG-TCTTGTACTAGTTGATTGTTCTGCAACTTATGATACTGTTGGCATGCTAAAGGATGC 476 consensus_14226#1 GG-TCTTGTACTAGTTGATTGTTCTGCAACTTATGATACTGTTGGCATGCTAAAGGATGC 450 consensus_14226#2 NGGTCTTGTACTAGTTGATTGTTCTGCAACTTATGATACTGTTGGCATGCTTAAAGGTGC 370 * ************************************************ ** * *** consensus_14226#0 CGTGGATTGTGG-ATGTTGTGTTGTATTGGCAAACAAGAAACCGCTTA-CTTGTGCTTAT 534 consensus_14226#1 CGTGGATCGTGG-ATGTTGTGTTGTATTGGCAAACAAGAAACCGCTTA-CTTGTGCTTAT 508 consensus_14226#2 NGTGGATCGTGGGATGTTGTANTTTATTGGCAACAAGGAACCCGCTTAATTNGTGCTTAT 430 ****** **** ******* * ********* * *** ******* * ******** consensus_14226#0 GAGGATTTCGAAAAGTTGGTCTCCAACTTCCGTCGCATAAGATTTGAATCTACTGTTGGA 594 consensus_14226#1 GAGGATTTCGAAAAGTTGGTTTCCAACTTCCGTCGCATGAGATTTGAATCTACTGTTGGA 568 consensus_14226#2 AGGGATTTCG-------------------------------------------------- 440 ******** consensus_14226#0 GCCAGTCTGCCTGTAATAGCTTCTGTGACTCGTATTATTGCCTCTGGAGATCCAGTTTCT 654 consensus_14226#1 GCCGGTTTGCCTGTAATAGCTTCTGTGACCCGTATTATTGCCTCTGGAGATCCAGTTTCT 628 consensus_14226#2 ------------------------------------------------------------ consensus_14226#0 CGTATTGTTGGCAGTCTGAGTGGTACACTTGGTTATGTGATGAGTGAGCTGGAGGATGGA 714 consensus_14226#1 CGTATTGTTGGCAGTCTGAGTGGTACACTTGGTTATGTGATGAGTGAGCTGGAGGATGGA 688 consensus_14226#2 ------------------------------------------------------------ consensus_14226#0 AAGAAATTTAGTGAAGTTGTGAAAACTGCCAAGTCTCTTGGCTATACAGAACCAGATCCA 774 consensus_14226#1 AAGAGATTTAGTGAAGTTGTGAAAACTGCCAAGTCTCTTGGCTATACAGAACCAGATCCA 748 consensus_14226#2 ------------------------------------------------------------ consensus_14226#0 CGTGATGATCTCAGTGGGATGGACGTAGCTAGAAAGGCATTGATCTTAGCTAGGCTTCTG 834 consensus_14226#1 CGTGATGATCTCAGTGGGATGGACGTAGCTAGAAAGGCATTGATCTTAGCTAGGCTTCTG 808 consensus_14226#2 ------------------------------------------------------------ consensus_14226#0 GGGCAACAGATTAGCATGGAGAATATTAATGTTGAGAGTTTATACCCCAGTGAATTAGGA 894 consensus_14226#1 GGGCAACGGATCAGCATGGAGAATATTAATGTTGAGGGTTTATACCCCAGTGAATTTGGA 868 consensus_14226#2 ------------------------------------------------------------ consensus_14226#0 CCTGATGCAATGTCCACAAAGGACTTCCTTGAAAGTGGTTTAGTACAGCTTGATAAAAGC 954 consensus_14226#1 CCTGATGCAATGTCCACAAAGGACTTCCTTGAAAGTGGTTTAGTACAGCTTGATAAAAGC 928 consensus_14226#2 ------------------------------------------------------------ consensus_14226#0 ATTGAAGAAAGAGTAAAGGCAGCATCTTTGAAAGGAAATGTTCTTCGCTATGTCTGTAAG 1014 consensus_14226#1 ATTGAAGAAAGAGTAAAGGCAGCATCTTTGAAAGGAAATGTTCTTCGCTATGTCTGTAAG 988 consensus_14226#2 ------------------------------------------------------------ consensus_14226#0 ATTGAAAGCACAGGGTGCCAAGTGGGCCTTGAAGAACTCCCGAAAAACTCTGCACTGGGA 1074 consensus_14226#1 ATTGAAAGCACAGGGTGCCAAGTGGGCCTTGAAGAACTCCCGAAAAACTCTGCACTGGGA 1048 consensus_14226#2 ------------------------------------------------------------ consensus_14226#0 AGGTTGAGAGGAAGTGACAATGTGGTGGAGATATACAGCAGATGCTACGAGAGCGCCCCT 1134 consensus_14226#1 AGGTTGAGAGGAAGTGACAATGTGGTGGAGATATACAGCAGATGCTACGAGAGCGCCCCT 1108 consensus_14226#2 ------------------------------------------------------------ consensus_14226#0 CTGGTGATTCAGGGCGCTGGAGCTGGCAATGATACCACTGCAGCTGGAGTTCTTGCTGAC 1194 consensus_14226#1 CTGGTGATTCAGGGCGCTGGAGCTGGCAATGATACCACTGCAGCTGGAGTTCTTGCTGAC 1168 consensus_14226#2 ------------------------------------------------------------ consensus_14226#0 ATACTTGATCTCCAGGATCTCTTCCACAAAACGGCTTGAAATCTATGTCTTGTAGGTCGA 1254 consensus_14226#1 ATACTTGATCTCCAGGATCTCTTCCACAAAACGGCTTGAAACCTATGTCTTCTAGGTCGA 1228 consensus_14226#2 ------------------------------------------------------------ consensus_14226#0 ACCGCAGAGTTGATTATGAGTCTTGTGACTTGTGGGGTTGTTTTGGTCACAGTATTACTT 1314 consensus_14226#1 ACCGCAGAGTTGATTATGAGTCTTGTGACTTGTGGGGTTGTTTTGGTCACAGTATTACTT 1288 consensus_14226#2 ------------------------------------------------------------ consensus_14226#0 AAATAAATCTTGAGCAGATATCAATTTTTGTACTGTACGCAGAAGGTTTTTGAACAAATT 1374 consensus_14226#1 AAATAAATCTTGAGCAGATATCAATTTTTGTACTGTACGCAGAAGGTTTTTGAACAAATT 1348 consensus_14226#2 ------------------------------------------------------------ consensus_14226#0 TGGAAGTTGGAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1434 consensus_14226#1 TGGAAGTTGGAACCAATGAGCAGTGACAT------------------------------- 1377 consensus_14226#2 ------------------------------------------------------------ consensus_14226#0 AAAAAAAAAA 1444 consensus_14226#1 ---------- consensus_14226#2 ---------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||