These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14255#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 2120 fasta sequence [AAGTCCGATGCAAAGCGGCGGCACTTCGCGAGAGAGGCATGGCGACGACCGCGACCCTCCCCTTCTCCTGCTCCTCCACCCTCCAAACCCTAACCCGCACCATCCCCCTCCGTCTCCGCCTCCACCGCCGCCGCTTCCTCCACCACCTCCCCTCCCTCGCTGCCCTCCCGAGGCTCCCGCTCCCGCGACCTCCCCTCCTCCCCCACGCGCGCCGCCACGTCTCGGCGTCCGCGGCGCCCAACGGCGCGTCCTCCGAGGGGGAGTACGACTACGACCTCTTCACCATCGGCGCCGGGAGCGGCGGGGTCCGGGCCTCGCGCTTCGCCTCCACGCTCTACGGCGCCCGCGCCGCCGTCTGCGAGATGCCCTTCGCCACCGTCGCCTCGGACGACCTCGGTGGAGTCGGCGGCACATGTGTGCTTCGTGGGTGTGTTCCAAAGAAATTATTAGTGTATGGATCCAAGTACTCTCATGAGTTTGAAGAGTCTCATGGCTTTGGGTGGGTGTATGAAACTGATCCAAAGCATGACTGGAACACTCTGATTGCCAACAAAAATACAGAGCTGCAGCGCCTTGTTGGCATTTACAAGAATATTTTAAACAACTCAGGAGTTACTCTAATTGAAGGCCGTGGAAAGATAGTTGATCCACATACTGTAAGTGTAGATGGAAAGCTCTACACTGCTAGGAACATACTTATAGCTGTTGGTGGGCGACCATCGATGCCAAATATCCCAGGAATAGAGCATGTTATAGATTCTGATGCTGCACTGGATCTACCTTCAAAACCTGAGAAAATTGCAATAGTGGGAGGTGGATATATTGCTCTGGAGTTTGCTGGAATTTTCAATGGCTTAAAAAGTGAGGTACATGTGTTTATTCGGCAGAAGAAAGTTTTAAGAGGGTTTGATGAAGAGGTCAGAGATTTCATCGCTGAACAGATGTCTCTAAGGGGCATCACATTTCATACTGAACAGAGTCCTCAAGCTATAACCAAATCAAATGATGGTTTGCTATCTCTGAAGACAAACAAAGAAACTATTGGTGGGTTCTCACATGTTATGTTCGCAACAGGTCGTAAACCAAACACAAAGAACCTTGGACTAGAGGAGGTTGGGGTGAAATTGGACAAGAACGGAGCAATAATGGTTGATGAGTATTCTCGAACCTCAGTTGATTCAATTTGGGCAGTGGGAGATGTTACTGATAGGGTCAACCTGACACCAGTTGCACTTATGGAAGGTGGTGCATTTGCAAAAACAGTGTTTGGTGATGAACCTACCAAACCAGATTACAGAGCTGTACCATCTGCCGTTTTCTCCCAACCACCCATCGGACAAGTTGGTCTTACTGAAGAGCA-GGCTATTGAGGAGTATGGAGATGTTGATATCTATACAGCAAACTTCAGGCCACTTAGGGCAACTCTCTCTGGATTACCTGATCGCATTTTCATGAAACTCATTGTGTGTGCTACAACAAACAAAGTTGTAGGAGTACACATGTGTGGTGAAGACGCACCTGAGATAATTCAGGGAGTTGCAATTGCTGTTAAAGCTGGGCTGACAAAGCAAGATTTTGATGCCACTATT-GGCATTCACCCAACATC-TGCAGAGGAATTTGTCACAATGAGAAATGCAACTAGAAAAGTTCGGAGAAGCACAACAGATGAGGTAGAATCTAAAGATAAGGTTGTTACTCAGAACTAGTACAGATAGGAGGCATTCTCAGAGGGACTTCTCTACTTCCGAGCAGCTGATTTACACTGGGCGGACAATTTTTTTTTTGTAGCGGTATCCACGGAAAGGAAACCCATGACAGGAAGCCAGCAAACTTGTATCATAGCGCTGACTGGCATTCTCTGATCCCCTTTTTGCATCTATTGTAGCTTGAACACGGTGATACACTATTAGCTGCTGTTTTCCTTCTCTTGGTTGAAATAAGTGCTGCACCATGTGAGTACCACAGCCTGGAAATTTTGTAAGAAAAAAAAGAAATATTATTTTGGTAGTAAAAATCAGCCTAATCTGAATTTTACATCATATCTGTGCTAGCATTTCCTAATATGTTGAAATTTTGCGGCAAAAGATGCATATTTCTTTTTGAGTAAAAAAAAAAAAAGA] [+] EMBL CB635804 [AAGTCCGATGCAAAGCGGCGGCACTTCGCGAGAGAGGCATGGCGACGACCGCGACCCTCCCCTTCTCCTGCTCCTCCACCCTCCAAACCCTAACCCGCACCATCCCCCTCCGTCTCCGCCTCCACCGCCGCCGCTTCCTCCACCACCTCCCCTCCCTCGCTGCCCTCCCGAGGCTCCCGCTCCCGCGACCTCCCCTCCTCCCCCACGCGCGCCGCCACGTCTCGGCGTCCGCGGCGCCCAACGGCGCGTCCTCCGAGGGGGAGTACGACTACGACCTCTTCACCATCGGCGCCGGGAGCGGCGGGGTCCGGGCCTCGCGCTTCGCCTCCACGCTCTACGGCGCCCGCGCCGCCGTCTGCGAGATGCCCTTCGCCACCGTCGCCTCGGACGACCTCGGTGGAGTCGGCGGCACATGTGTGCTTCGTGGGTGTGTTCCAAAGAAATTATTAGTGTATGGATCCAAGTACTCTCATGAGTTTGAAGAGTCTCATGGCTTTGGGTGGGTGTATGAAACTGATCCAAAGCATGACTGGAACACTCTGATTGCCAACAAAAATACAGAGCTGCAGCGCCTTGTTGGCATTTACAAGAATATTTTAAACAACTCAGGAGTTACTCTAATTGAAGGCCGTGGAAAGATAGTTGATCCACATACTGTAAGTGTAGATGGAAAGCTCTACACTGCTAGGAACATACTTATAGCTGTTGGTGGGCGACCATCGATGCCAAATATCCCAGGAATAGAGCATGTTATAGATTCTGATGCTGCACTGGATCTACCTTCANAACCTGAGA ] [+] EMBL CB646067 [ TTCTCCTGCCCCCCAACACTCCAAACCCTAACGCGCACCATCCCCCTCCGCGTCCGCCTCCACCGCCGCCGCTTCCTCCACCACCTCCCCTCCCTCGCTGCCCTCCCGAGGCTCCCGCTCCCGCGACCTCCCCTCCTCCCCCACGCGCGCCGCCACGTCTCGGCGTCCGCGGCGCCCAACGGCGCGCCCTCCGAGGGGGAGTACGACTACGACCTCTTCACCATCGGCGCCGGGAGCGGCGGGGTCCGGGCCTCGCGCTTCGCCTCCACGCTCTACGGCGCCCGCGCCGCCGTCTGCGAGATGCCCTTCGCCACCGTCGCCTCGGACGACCTCGGTGGAGTCGGCGGCACATGTGTGCTTCGTGGGTGTGCTCCAAAGAAATCATTAGTGTATGGATCCAAGT ] [+] EMBL AK103418 [ CTCCACCACCTCCCCTCCCTCGCTGCCCTCCCGAGGCTCCCGCTCCCGCGACCTCCCCTCCTCCCCCACGCGCGCCGCCACGTCTCGGCGTCCGCGGCGCCCAACGGCGCGTCCTCCGAGGGGGAGTACGACTACGACCTCTTCACCATCGGCGCCGGGAGCGGCGGGGTCCGGGCCTCGCGCTTCGCCTCCACGCTCTACGGCGCCCGCGCCGCCGTCTGCGAGATGCCCTTCGCCACCGTCGCCTCGGACGACCTCGGTGGAGTCGGCGGCACATGTGTGCTTCGTGGGTGTGTTCCAAAGAAATTATTAGTGTATGGATCCAAGTACTCTCATGAGTTTGAAGAGTCTCATGGCTTTGGGTGGGTGTATGAAACTGATCCAAAGCATGACTGGAACACTCTGATTGCCAACAAAAATACAGAGCTGCAGCGCCTTGTTGGCATTTACAAGAATATTTTAAACAACTCAGGAGTTACTCTAATTGAAGGCCGTGGAAAGATAGTTGATCCACATACTGTAAGTGTAGATGGAAAGCTCTACACTGCTAGGAACATACTTATAGCTGTTGGTGGGCGACCATCGATGCCAAATATCCCAGGAATAGAGCATGTTATAGATTCTGATGCTGCACTGGATCTACCTTCAAAACCTGAGAAAATTGCAATAGTGGGAGGTGGATATATTGCTCTGGAGTTTGCTGGAATTTTCAATGGCTTAAAAAGTGAGGTACATGTGTTTATTCGGCAGAAGAAAGTTTTAAGAGGGTTTGATGAAGAGGTCAGAGATTTCATCGCTGAACAGATGTCTCTAAGGGGCATCACATTTCATACTGAACAGAGTCCTCAAGCTATAACCAAATCAAATGATGGTTTGCTATCTCTGAAGACAAACAAAGAAACTATTGGTGGGTTCTCACATGTTATGTTCGCAACAGGTCGTAAACCAAACACAAAGAACCTTGGACTAGAGGAGGTTGGGGTGAAATTGGACAAGAACGGAGCAATAATGGTTGATGAGTATTCTCGAACCTCAGTTGATTCAATTTGGGCAGTGGGAGATGTTACTGATAGGGTCAACCTGACACCAGTTGCACTTATGGAAGGTGGTGCATTTGCAAAAACAGTGTTTGGTGATGAACCTACCAAACCAGATTACAGAGCTGTACCATCTGCCGTTTTCTCCCAACCACCCATCGGACAAGTTGGTCTTACTGAAGAGCA GGCTATTGAGGAGTATGGAGATGTTGATATCTATACAGCAAACTTCAGGCCACTTAGGGCAACTCTCTCTGGATTACCTGATCGCATTTTCATGAAACTCATTGTGTGTGCTACAACAAACAAAGTTGTAGGAGTACACATGTGTGGTGAAGACGCACCTGAGATAATTCAGGGAGTTGCAATTGCTGTTAAAGCTGGGCTGACAAAGCAAGATTTTGATGCCACTATT GGCATTCACCCAACATC TGCAGAGGAATTTGTCACAATGAGAAATGCAACTAGAAAAGTTCGGAGAAGCACAACAGATGAGGTAGAATCTAAAGATAAGGTTGTTACTCAGAACTAGTACAGATAGGAGGCATTCTCAGAGGGACTTCTCTACTTCCGAGCAGCTGATTTACACTGGGCGGACAA TTTTTTTTTGTAGCGGTATCCACGGAAAGGAAACCCATGACAGGAAGCCAGCAAACTTGTATCATAGCGCTGACTGGCATTCTCTGATCCCCTTTTTGCATCTATTGTAGCTTGAACACGGTGATACACTATTAGCTGCTGTTTTCCTTCTCTTGGTTGAAATAAGTGCTGCACCATGTGAGTACCACAGCCTGGAAATTTTGTAAGAAAAAAAAGAAATATTATTTTGGTAGTACAACTCAGCCTAATCTGAATTTTACATCATATCTGTGC ] [-] EMBL CA305667 [ GTCTCATGGCTTTGGGTGGGTGTATGAAACTGATCCAAAGCATGACTGGAACACTCTGATTGCCAACAAAAATACAGAGCTGCAGCGCCTTGTTGGCATTTACAAGAATATTTTAAACAACTCAGGAGTTACTCTAATTGAAGGCCGTGGAAAGATAGTTGATCCACATACTGTAAGTGTAGATGGAAAGCTCTACACTGCTAGGAACATACTTATAGCTGTTGGTGGGCGACCATCGATGCCAAATATCCCAGGAATAGAGCATGTTATAGATTCTGATGCTGCACTGGATCTACCTTCAAAACCTGAGAAAATTGCAATAGTGGGAGGTGGATATATTGCTCTGGAGTTTGCTGGAATTTTCAATGGCTT ] [+] EMBL AA751995 [ cacgAGAGA TTCATCGCTGAACAGATGTCTCTAAGGGGCATCACATTTCATACTGAACAGAGTCCTCAAGCTATAACCAAATCAAATGATGGTTTGCTATCTCTGAAGACAAACAAAGAAACTATTGGTGGGTTCTCACATGTTATGTTCGCAACAGGTCGTAAACCAAACACAAAGAACCTTGGACTANAGGAGGTTGGGGTGAAATTGGACAAGAACGGAGCAATAATGGTTGATGAGTATTCTCGAACCTCAGTTGATTCAATTTGGGCAGTGGGANATGTTACTGATAGGGTCAACCTGACACCAGTTGCACTTATGGAANGTGGTGCATTTGCAAAAACAGTGTTTGGTGATGAACCTACCAAACCANATTACAGANCTGTNCCATCTGCCGTTTTCTCCCAACCACCCATCGGACAAGTTGGTCTTACTGAAAAACA NGCTATTGANGANTATGGANATGTTGATATCTATACANCAAACTTCANGCCACTTANGGCAACTCTCTCTGGATTACCTGATCGCATT ] [+] EMBL CF308656 [ CTGAACAGAGTCCTCAAGCTATAACCAAATCAAATGATGGTTTGCTATCTCTGAAGACAAACAAAGAAACTATTGGTGGGTTCTCACATGTTATGTTCGCAACAGGTCGTAAACCAAACACAAAGAACCTTGGACTAGAGGAGGTTGGGGTGAAATTGGACAAGAACGGAGCAATAATGGTTGATGAGTATTCTCGAACCTCAGTTGATTCAATTTGGGCAGTGGGAGATGTTACTGATAGGGTCAACCTGACACCAGTTGCACTTATGGAAGGTGGTGCATTTGCAAAAACAGTGTTTGGTGATGAACCTACCAAACCAGATTACAGAGCTGTACCATCTGCCGTTTTCTCCCAACCACCCATCGGACAAGTTGGTCTTACTGAAGAGCA GGCTATTGAGGAGTATGGATATGTTGATATCTATACAGCAAACTTCAGGCCACTTAGGGCAACTCTCTCTGGATTACCTGATCGCATTTTCATGAAACTCATTGTGTGTGCTACAACAAACAAAGTTGTAGGAGTACACATGTGTGGTGAAGACGCACCTGAGATAATTCAGGGAGTTGCAATTGCTGTTAAAGCTGGGCTGACAAAGCAAGATTTTGATGCCACTATT GGCATTCACC ] [+] EMBL CF308352 [ CTGAACAGAGTCCTCAAGCTATAACCAAATCAAATGATGGTTTGCTATCTCTGAAGACAAACAAAGAAACTATTGGTGGGTTCTCACATGTTATGTTCGCAACAGGTCGTAAACCAAACACAAAGAACCTTGGACTAGAGGAGGTTGGGGTGAAATTGGACAAGAACGGAGCAATAATGGTTGATGAGTATTCTCGAACCTCAGTTGATTCAATTTGGGCAGTGGGAGATGTTACTGATAGGGTCAACCTGACACCAGTTGCACTTATGGAAGGTGGTGCATTTGCAAAAACAGTGTTTGGTGATGAACCTACCAAACCAGATTACAGAGCTGTACCATCTGCCGTTTTCTCCCAACCACCCATCGGACAAGTTGGTCTTACTGAAGAGCA GGCTATTGAGGAGTATGGATATGTTGATATCTATACAGCAAACTTCAGGCCACTTAGGGCAACTCTCTCTGGATTACCTGATCGCATTTTCATGAAACTCATTGTGTGTGCTACAACAAACAAAGTTGTAGGAGTACACATGTGTGGTGAAGACGCACCTGAGATAATTCAGGGAGTTGCAATTGCTGTTAAAG ] [-] EMBL CB635805 [ GGTCTTACTGAAGAGCA GGCTATTGAGGAGTATGGAGATGTTGATATCTATACAGCAAACTTCAGGCCACTTAGGGCAACTCTCTCTGGATTACCTGATCGCATTTTCATGAAACTCATTGTGTGTGCTACAACAAACAAAGTTGTAGGAGTACACATGTGTGGTGAAGACGCACCTGAGATAATTCAGGGAGTTGCAATTGCTGTTAAAGCTGGGCTGACAAAGCAAGATTTTGATGCCACTATT GGCATTCACCCAACATC TGCAGAGGAATTTGTCACAATGAGAAATGCAACTAGAAAAGTTCGGAGAAGCACAACAGATGAGGTAGAATCTAAAGATAAGGTTGTTACTCAGAACTAGTACAGATAGGAGGCATTCTCAGAGGGACTTCTCTACTTCCGAGCAGCTGATTTACACTGGGCGGACAA TTTTTTTTTGTAGCGGTATCCACGGAAAGGAAACCCATGACAGGAAGCCAGCAAACTTGTATCATAGCGCTGACTGGCATTCTCTGATCCCCTTTTTGCATCTATTGTAGCTTGAACACGGTGATATACTATTAGCTGCTGTTTTCCTTCTCTTGGTTGAAATAAGTGCTGCACCATGTGAGTACCACAGCCTGGAAATTTTGTAAGAAAAAAAAGAAGTATTATTTTGGTAGTACAACTCAGCCTAATCTGAATTTTACATCATATCTGTGCTAGCATTTCCTAATATGTTGAAATTTTGCGGCAAAAGATGCATATTTCTTTTTGAGTAAAAAAAAAAAAAGA] [-] EMBL CB646068 [ TACTGAAGAGCAGGGCTATTGAGGAGTATGGAGATGTTGATATCTATACAGCAAACTTCAGGCCACTGAGGGCAACTTTCTGTGGATTACCTGATCGCATTTTCATGAAACTCATTGTGTGTGCTACAACAAACAAAGTTGTAGGAGTACACATGTGTGGTGAAGACGCACCTGAGATAATTCAGGGAGTTGCAATTGCTGTTAAAGCTGGGCTGACAAAGCAAGATTTTGATGCCACTATT GGCATTCACCCAACATC TGCAGAGGAATTTGTCACAATGAGAAATGCAACTAGAAAAGTTCGGAGAAGCACAACAGATGAGGTAGAATCTAAAGATAAGGTTGTTACTCAGAACTAGTACAGATAGGAGGCATTCTCAGAGGGACTTCTCTACTTCCGAGCAGCTGATTTACACTGGGCGGACAATTTTTTTTTTGTAGCGGTATCCACGGAAAGGAAACCCATGACAGGAAGCCAGCAAACTTGTATCATAGCGCTGACTGGCATTCTCTGATCCCCTTTTTGCATCTATTGTAGCTTGAACACGGTGATACACTATTAGCTGCTGTTTTCCTTCTCTTGGTTGAAATAAGTGGGGCACCATGTGAGTACCACAGCCTGGAAATTTTGTAAGAAAAAAAAGAAATATTA ] [+] EMBL OSC8601 [ GCTATTGAGGAGTATGGAGATGTTGATATCTATACAGCAAACTTCAGGCCACTTAGGGCAACTCTCTCTGGATTACCTGATCGCATTTTCATGAAACTCATTGTGTGTGCTACAACAAACAAAGTTGTAGGAGTACACATGTGTGGTGAAGACGCACCTGAGATAATTCAGGGAGTTGCAATTGCTGTTAAAGCTGGGCTGACAAAGCAAGATTTTNNTGCCACTATTNGGCATTCACCCANCATCTTGCAGAGGAn ] [-] EMBL CF308657 [ TTCATGAAACTCATTGTGTGTGCTACAACAAACAAAGTTGTAGGAGTACACATGTGTGGTGAAGACGCACCTGAGATAATTCAGGGAGTTGCAATTGCTGTTAAAGCTGGGCTGACAAAGCAAGATTTTGATGCCACTATT GGCATTCACCCAACATC TGCAGAGGAATTTGTCACAATGAGAAATGCAACTAGAAAAGTTCGGAGAAGCACAACAGATGAGGTAGAATCTAAAGATAAGGTTGTTACTCAGAACTAGTACAGATAGGAGGCATTCTCAGAGGGACTTCTCTACTTCCGAGCAGCTGATTTACACTGGGCGGACAATTTTTTTTTTGTAGCGGTATCCACGGAAAGGAAACCCATGACAGGAAGCCAGCAAACTTGTATCATAGCGCTGACTGGCATTCTCTGATCCCCTAAAGACATCTATTGTAGCTTGAACACGGTGATACACTATTAGCTGCTGTTTTCCTTCTCTTGGTTGAAATAAGTGCTGCACCATGTGAGTACCACAGCCTGGAAATTTTGTAAGAAAAAAAAGAAATATTATTTTGGTAGTAAAAAa ] [-] EMBL CF308353 [ CCCAACATT TGCACAGGAATTTGTCACAATGAGCAATGCAACTAGCAAAGTTTGCAGAAGCACAACAGATGAGGTAGAATCTAAACATGAGGTTGTTACTCAGAACTAGTACAGATAGGAGGCATTCTCAGAGGGACTTCTCTACTTCCGAGCAGTTGATTTACACTGGGCGGACAATTTTTTTTTTGTAGCGGTATCCACGGAAAGGAAACCCATGACAGGAAGCCAGCAAACTTGTATCATAGCGCTGACTGGCATTCTCTGATCCCCTTTTTGCATATATTGTAGCTTGAACACGGTGATACACTATTAGCTGCTGTTTTCCTTCTCTTGGTTGAAATAAGTGCTGCACCATGTGAGTACCACAGCCTGGAAATTTTGTAAGAAAAAAAAGAAATATTATTTTGGTAGTAAAAAa ] [+] EMBL AU091603 [ TGACTGGCATTCTCTGATCCCCTTNTTGCATCTATTGTAGCTTGAACACGGTGATACACTATTAGCTGCTGTTTTCCTTCTCTTGGTTGAAATAAGTGCTGCACCATGTGAGTACCACAGCCTGGAAATTTTGTANGAAAAAAAAGAAATATTATTTTGGTAGTAAAAA ] consensusID : consensus_14255#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 472 fasta sequence [GNCAGAGGAATTTGTCACAATGAGAAATGCAACTTGGCAAAGTTCNGGAGAAGCCACCAACCAGATGAGGTAGAATCTTAAAGGATTAAGGTTGTTACCTCCAGAACTTAGTTACCAGATTAGGAGGCCATTCCTCCAGGAGGGACTTCTCCTACCTCCGAAGCAAGCTTGATTTACCACTGGGCGGACCAATTTTTTTTTGTAGCCGGTATCCACGGAAAGGAAACCCATGACAGGAAGCCAGCAAACTTGTATCATAGCGCTGACTGGCATTCTCTGATCCCCTTTTTGCATCTATTGTAGCTTGAACACGGTGATACACTATTAGCTGCTGTTTTCCTTCTCTTGGTTGAAATAAGTGCTGCACCATGTGAGTACCACAGCCTGGAAATTTTGTAAGAAAAAAAAGAAATATTATTTTGGTAGTACAACTCAGCCTAATCTGAATTTTACATCAAAAAAAAAAAAAAAA] [+] EMBL AU096824 [GNCAGAGGAATTTGTCACAATGAGAAATGCAACTTGGCAAAGTTCNGGAGAAGCCACCAACCAGATGAGGTAGAATCTTAAAGGATTAAGGTTGTTACCTCCAGAACTTAGTTACCAGATTAGGAGGCCATTCCTCCAGGAGGGACTTCTCCTACCTCCGAAGCAAGCTTGATTTACCACTGGGCGGACCAATTTTTTTTTGTAGCCGGTATCCACGGAAAGGAAACCCATGACAGGAAGCCAGCAAACTTGTATCATAGCGCTGACTGGCATTCTCTGATCCCCTTTTTGCATCTATTGTAGCTTGAACACGGTGATACACTATTAGCTGCTGTTTTCCTTCTCTTGGTTGAAATAAGTGCTGCACCATGTGAGTACCACAGCCTGGAAATTTTGTAAGAAAAAAAAGAAATATTATTTTGGTAGTACAACTCAGCCTAATCTGAATTTTACATCAAAAAAAAAAAAAAAA] consensusID : consensus_14255#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 235 fasta sequence [CACATCATCGCCTTCGCTTCTCCTCTCTCCGCCCCACACTGTCGGAAGTCGGAAGCAAAGCGTCGGCACCGGCGAGAGAGGCATGGCGACGACCGCGACCCTCCCCTTCTCCTGCTCCTCCACCCTCCAAACCCTAACCCGCACCATCCCCCTCCGNCTCCGCCTCCACCGNNGTCGCTTCCTCCACCACCTCCCCTNNCTCGCTGNCCTCCCGAGGCTCCCGNTCCCGCGACCT] [+] EMBL C28420 [CACATCATCGCCTTCGCTTCTCCTCTCTCCGCCCCACACTGTCGGAAGTCGGAAGCAAAGCGTCGGCACCGGCGAGAGAGGCATGGCGACGACCGCGACCCTCCCCTTCTCCTGCTCCTCCACCCTCCAAACCCTAACCCGCACCATCCCCCTCCGNCTCCGCCTCCACCGNNGTCGCTTCCTCCACCACCTCCCCTNNCTCGCTGNCCTCCCGAGGCTCCCGNTCCCGCGACCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14255#0 AAGTCCGATGCAAAGCGGCGGCACTTCGCGAGAGAGGCATGGCGACGACCGCGACCCTCC 60 consensus_14255#1 ------------------------------------------------------------ consensus_14255#2 ------------------------------------------------------------ consensus_14255#0 CCTTCTCCTGCTCCTCCACCCTCCAAACCCTAACCCGCACCATCCCCCTCCGTCTCCGCC 120 consensus_14255#1 ------------------------------------------------------------ consensus_14255#2 ------------------------------------------------------------ consensus_14255#0 TCCACCGCCGCCGCTTCCTCCACCACCTCCCCTCCCTCGCTGCCCTCCCGAGGCTCCCGC 180 consensus_14255#1 ------------------------------------------------------------ consensus_14255#2 ------------------------------------------------------------ consensus_14255#0 TCCCGCGACCTCCCCTCCTCCCCCACGCGCGCCGCCACGTCTCGGCGTCCGCGGCGCCCA 240 consensus_14255#1 ------------------------------------------------------------ consensus_14255#2 ------------------------------------------------------------ consensus_14255#0 ACGGCGCGTCCTCCGAGGGGGAGTACGACTACGACCTCTTCACCATCGGCGCCGGGAGCG 300 consensus_14255#1 ------------------------------------------------------------ consensus_14255#2 ------------------------------------------------------------ consensus_14255#0 GCGGGGTCCGGGCCTCGCGCTTCGCCTCCACGCTCTACGGCGCCCGCGCCGCCGTCTGCG 360 consensus_14255#1 ------------------------------------------------------------ consensus_14255#2 ------------------------------------------------------------ consensus_14255#0 AGATGCCCTTCGCCACCGTCGCCTCGGACGACCTCGGTGGAGTCGGCGGCACATGTGTGC 420 consensus_14255#1 ------------------------------------------------------------ consensus_14255#2 ------------------------------------------------------------ consensus_14255#0 TTCGTGGGTGTGTTCCAAAGAAATTATTAGTGTATGGATCCAAGTACTCTCATGAGTTTG 480 consensus_14255#1 ------------------------------------------------------------ consensus_14255#2 ------------------------------------------------------------ consensus_14255#0 AAGAGTCTCATGGCTTTGGGTGGGTGTATGAAACTGATCCAAAGCATGACTGGAACACTC 540 consensus_14255#1 ------------------------------------------------------------ consensus_14255#2 ------------------------------------------------------------ consensus_14255#0 TGATTGCCAACAAAAATACAGAGCTGCAGCGCCTTGTTGGCATTTACAAGAATATTTTAA 600 consensus_14255#1 ------------------------------------------------------------ consensus_14255#2 ------------------------------------------------------------ consensus_14255#0 ACAACTCAGGAGTTACTCTAATTGAAGGCCGTGGAAAGATAGTTGATCCACATACTGTAA 660 consensus_14255#1 ------------------------------------------------------------ consensus_14255#2 ------------------------------------------------------------ consensus_14255#0 GTGTAGATGGAAAGCTCTACACTGCTAGGAACATACTTATAGCTGTTGGTGGGCGACCAT 720 consensus_14255#1 ------------------------------------------------------------ consensus_14255#2 ------------------------------------------------------------ consensus_14255#0 CGATGCCAAATATCCCAGGAATAGAGCATGTTATAGATTCTGATGCTGCACTGGATCTAC 780 consensus_14255#1 ------------------------------------------------------------ consensus_14255#2 ------------------------------------------------------------ consensus_14255#0 CTTCAAAACCTGAGAAAATTGCAATAGTGGGAGGTGGATATATTGCTCTGGAGTTTGCTG 840 consensus_14255#1 ------------------------------------------------------------ consensus_14255#2 ------------------------------------------------------------ consensus_14255#0 GAATTTTCAATGGCTTAAAAAGTGAGGTACATGTGTTTATTCGGCAGAAGAAAGTTTTAA 900 consensus_14255#1 ------------------------------------------------------------ consensus_14255#2 ------------------------------------------------------------ consensus_14255#0 GAGGGTTTGATGAAGAGGTCAGAGATTTCATCGCTGAACAGATGTCTCTAAGGGGCATCA 960 consensus_14255#1 ------------------------------------------------------------ consensus_14255#2 ------------------------------------------------------------ consensus_14255#0 CATTTCATACTGAACAGAGTCCTCAAGCTATAACCAAATCAAATGATGGTTTGCTATCTC 1020 consensus_14255#1 ------------------------------------------------------------ consensus_14255#2 ------------------------------------------------------------ consensus_14255#0 TGAAGACAAACAAAGAAACTATTGGTGGGTTCTCACATGTTATGTTCGCAACAGGTCGTA 1080 consensus_14255#1 ------------------------------------------------------------ consensus_14255#2 ------------------------------------------------------------ consensus_14255#0 AACCAAACACAAAGAACCTTGGACTAGAGGAGGTTGGGGTGAAATTGGACAAGAACGGAG 1140 consensus_14255#1 ------------------------------------------------------------ consensus_14255#2 ------------------------------------------------------------ consensus_14255#0 CAATAATGGTTGATGAGTATTCTCGAACCTCAGTTGATTCAATTTGGGCAGTGGGAGATG 1200 consensus_14255#1 ------------------------------------------------------------ consensus_14255#2 ------------------------------------------------------------ consensus_14255#0 TTACTGATAGGGTCAACCTGACACCAGTTGCACTTATGGAAGGTGGTGCATTTGCAAAAA 1260 consensus_14255#1 ------------------------------------------------------------ consensus_14255#2 ------------------------------------------------------------ consensus_14255#0 CAGTGTTTGGTGATGAACCTACCAAACCAGATTACAGAGCTGTACCATCTGCCGTTTTCT 1320 consensus_14255#1 ------------------------------------------------------------ consensus_14255#2 ------------------------------------------------------------ consensus_14255#0 CCCAACCACCCATCGGACAAGTTGGTCTTACTGAAGAGCAGGCTATTGAGGAGTATGGAG 1380 consensus_14255#1 ------------------------------------------------------------ consensus_14255#2 ------------------------------------------------------------ consensus_14255#0 ATGTTGATATCTATACAGCAAACTTCAGGCCACTTAGGGCAACTCTCTCTGGATTACCTG 1440 consensus_14255#1 ------------------------------------------------------------ consensus_14255#2 ------------------------------------------------------------ consensus_14255#0 ATCGCATTTTCATGAAACTCATTGTGTGTGCTACAACAAACAAAGTTGTAGGAGTACACA 1500 consensus_14255#1 ------------------------------------------------------------ consensus_14255#2 ------------------------------------------------------------ consensus_14255#0 TGTGTGGTGAAGACGCACCTGAGATAATTCAGGGAGTTGCAATTGCTGTTAAAGCTGGGC 1560 consensus_14255#1 ------------------------------------------------------------ consensus_14255#2 ------------------------------------------------------------ consensus_14255#0 TGACAAAGCAAGATTTTGATGCCACTATTGGCATTCACCCAACATCTGCAGAGGAATTTG 1620 consensus_14255#1 ----------------------------------------------GNCAGAGGAATTTG 14 consensus_14255#2 ------------------------------------------------------------ consensus_14255#0 TCACAATGAGAAATGCAACTAG--AAAAGTTCGGAGAAGC-ACAA--CAGATGAGGTAGA 1675 consensus_14255#1 TCACAATGAGAAATGCAACTTGGCAAAGTTCNGGAGAAGCCACCAACCAGATGAGGTAGA 74 consensus_14255#2 ------------------------------------------------------------ consensus_14255#0 ATCTAAAGA---TAAGGTTGTTACT--CAGAACT-AGTA--CAGAT-AGGAGGC-ATTCT 1725 consensus_14255#1 ATCTTAAAGGATTAAGGTTGTTACCTCCAGAACTTAGTTACCAGATTAGGAGGCCATTCC 134 consensus_14255#2 ------------------------------------------------------------ consensus_14255#0 C---AGAGGGACTTCTC-TACTTCCGA-GCAG--CTGATTTAC-ACTGGGCGGACAATTT 1777 consensus_14255#1 TCCAGGAGGGACTTCTCCTACCTCCGAAGCAAGCTTGATTTACCACTGGGCGGACCAATT 194 consensus_14255#2 --------------------------------------CACATCATCGCCTTCGCT-TCT 21 * * * * * consensus_14255#0 TTTTTTTGTAGC-GGTATCCACGGAAAGGAAACCCATGACAG-GAAGCCAGCAAACTTGT 1835 consensus_14255#1 TTTTTTTGTAGCCGGTATCCACGGAAAGGAAACCCATGACAG-GAAGCCAGCAAACTTGT 253 consensus_14255#2 CCTCTCTCCGCCCCACACTGTCGGAAGTCGGAAGCAAAGCGTCGGCACCGGCGAG--AGA 79 * * * * * ***** * ** * * ** ** * * consensus_14255#0 ATCATAGCGCTGACTGGCATTCTCTGATCCCCTTTTTGCATCTATTGTAGCTTGAACACG 1895 consensus_14255#1 ATCATAGCGCTGACTGGCATTCTCTGATCCCCTTTTTGCATCTATTGTAGCTTGAACACG 313 consensus_14255#2 GGCATGGCGACGACCGCGACCCTCC---CCTTCTCCTGC-TCCTCCACCCTCCAAACCCT 135 *** *** *** * * *** ** * *** ** *** * consensus_14255#0 GTGATACACTATTAGCTGCTGTTTTCCTTCTCTTGGTTGAAATAAGTGCTGCACCATGTG 1955 consensus_14255#1 GTGATACACTATTAGCTGCTGTTTTCCTTCTCTTGGTTGAAATAAGTGCTGCACCATGTG 373 consensus_14255#2 AACCCGCACCATCCCCCTCCGNCTCCGCCTCCACCGNNGTCGCT--TCCTCCACCACCT- 192 *** ** * * * * * * * * * ** ***** * consensus_14255#0 AGTACCACAGCCTGGAAATTTTGTAAGAAAAAAAAGAAATATTATTTTGGTAGTAAAAAT 2015 consensus_14255#1 AGTACCACAGCCTGGAAATTTTGTAAGAAAAAAAAGAAATATTATTTTGGTAGTACAACT 433 consensus_14255#2 ----CCCCTNNCTCGCTGNCCTCCCGAGGCTCCCGNTCCCGCGACCT------------- 235 ** * ** * * * * consensus_14255#0 CAGCCTAATCTGAATTTTACATCATATCTGTGCTAGCATTTCCTAATATGTTGAAATTTT 2075 consensus_14255#1 CAGCCTAATCTGAATTTTACATCAAAAAAAAAAAAAAAA--------------------- 472 consensus_14255#2 ------------------------------------------------------------ consensus_14255#0 GCGGCAAAAGATGCATATTTCTTTTTGAGTAAAAAAAAAAAAAGA 2120 consensus_14255#1 --------------------------------------------- consensus_14255#2 --------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||