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Oryza sativa
cluster # 14261 cluster # 14261       Sequences # 15       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14261#0 length = 846 sequences # 10  
consensus_14261#1 length = 607 sequences # 2  
consensus_14261#2 length = 451 sequences # 1  
consensus_14261#3 length = 416 sequences # 1  
consensus_14261#4 length = 233 sequences # 1  

consensusID : consensus_14261#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 846
fasta sequence
                              [CCTCTGCTCCGACTTCCGAGCAAAGCCAAGTTGCTCACCGACTCACCCGTAGAGCTAGCTAGCCATGGCTGTTGCCGCAAGAGCCGCCGCCGTGGCGTGCCTCCTGGTCGTAGGCCTCGCGGCCGTGGCGGGGGTCGACGGCGCCACGGCGAGCTCCCCGGCCCCGGCGCCGGCCGTGGACTGCACGGCGGAGGCGCTGAAGTTGGCGGACTGCCTGGACTACGTGACCCCGGGGAAGACGGCGCCGAGCCGGCC-GTCGAAGCTGTGCTGCGGGGAGGTGAAGGGCGCGCTCAAGGACAGCGCCGCCGTGGGCTGCCTGTGCGCCGCCTTCACCTCCAAGACGCTGCCCCTCCCGATCAACATCACCCGCGCCTTGCACCTCCCCGCCGCCTGCGGCGCCGACGCCTCCGCCTTCAGCAAGTGCCTCGCACCGGCGCCGTCGCCGTCCGTGGCCCCGGGGACATCGTCCGGCAGCGGCGGTGCGGCAGCGGCACCGGCGAAGGGCGCCGCCGCAGCGAGGTCTCCGATGGCATCGACCACCGCCGTGCTCGTCGTCGCCGCCGCCGTGGCAGCTCCTCTGCTCGCCTTCTTTCACTTCTGATCGAGGAGTCCTTTCGTAGCCTCATTACATTCTACAGTTTGTCGTTGTGATCGTGATTAGACTCGGTGACTTTTTGTTGTGACAATTTGAGTTTACTGCATGCATGCACCCTGCCGTGATTAATTTAGCTCTCCAGAGTGAGCATTCATATTTAAAATAGTTTCCGTGAGTTATTTTTAATTTGTATCGTTATATGTGCATCATATTATTAAGAGCGGTTAAATTTGACAAATTGGCTACAAAGT]

[+] EMBL AK068223             [CCTCTGCTCCGACTTCCGAGCAAAGCCAAGTTGCTCACCGACTCACCCGTAGAGCTAGCTAGCCATGGCTGTTGCCGCAAGAGCCGCCGCCGTGGCGTGCCTCCTGGTCGTAGGCCTCGCGGCCGTGGCGGGGGTCGACGGCGCCACGGCGAGCTCCCCGGCCCCGGCGCCGGCCGTGGACTGCACGGCGGAGGCGCTGAAGTTGGCGGACTGCCTGGACTACGTGACCCCGGGGAAGACGGCGCCGAGCCGGCC GTCGAAGCTGTGCTGCGGGGAGGTGAAGGGCGCGCTCAAGGACAGCGCCGCCGTGGGCTGCCTGTGCGCCGCCTTCACCTCCAAGACGCTGCCCCTCCCGATCAACATCACCCGCGCCTTGCACCTCCCCGCCGCCTGCGGCGCCGACGCCTCCGCCTTCAGCAAGTGCCTCGCACCGGCGCCGTCGCCGTCCGTGGCCCCGGGGACATCGTCCGGCAGCGGCGGTGCGGCAGCGGCACCGGCGAAGGGCGCCGCCGCAGCGAGGTCTCCGATGGCATCGACCACCGCCGTGCTCGTCGTCGCCGCCGCCGTGGCAGCTCCTCTGCTCGCCTTCTTTCACTTCTGATCGAGGAGTCCTTTCGTAGCCTCATTACATTCTACAGTTTGTCGTTGTGATCGTGATTAGACTCGGTGACTTTTTGTTGTGACAATTTGAGTTTACTGCATGCATGCACCCTGCCGTGATTAATTTAGCTCTCCAGAGTGAGCATTCATATTTAAAATAGTTTCCGTGAGTTATTTTTAATTTGTATCGTTATATGTGCATCATATTATTAAGAGCGGTTAAATTTGACAAATTGGCTACAAAGT]
[+] EMBL AK070241             [       TCCGACTTCCGAGCAAAGCCAAGTTGCTCACCGACTCACCCGTAGAGCTAGCTAGCCATGGCTGTTGCCGCAAGAGCCGCCGCCGTGGCGTGCCTCCTGGTCGTAGGCCTCGCGGCCGTGGCGGGGGTCGACGGCGCCACGGCGAGCTCCCCGGCCCCGGCGCCGGCCGTGGACTGCACGGCGGAGGCGCTGAAGTTGGCGGACTGCCTGGACTACGTGACCCCGGGGAAGACGGCGCCGAGCCGGCC GTCGAAGCTGTGCTGCGGGGAGGTGAAGGGCGCGCTCAAGGACAGCGCCGCCGTGGGCTGCCTGTGCGCCGCCTTCACCTCCAAGACGCTGCCCCTCCCGATCAACATCACCCGCGCCTTGCACCTCCCCGCCGCCTGCGGCGCCGACGCCTCCGCCTTCAGCAAGTGCCTCGCACCGGCGCCGTCGCCGTCCGTGGCCCCGGGGACATCGTCCGGCAGCGGCGGTGCGGCAGCGGCACCGGCGAAGGGCGCCGCCGCAGCGAGGTCTCCGATGGCATCGACCACCGCCGTGCTCGTCGTCGCCGCCGCCGTGGCAGCTCCTCTGCTCGCCTTCTTTCACTTCTGATCGAGGAGTCCTTTCGTAGCCTCATTACATTCTACAGTTTGTCGTTGTGATCGTGATTAGACTCGGTGACTTTTTGTTGTGACAATTTGAGTTTACTGCATGCATGCACCCTGCCGTGATTAATTTAGCTCTCCAGAGTGAGCATTCATATTTAAAATAGTTTCCGTGAGTTATTTTTAATTTGTATCGTTATATGTGCATCATATTATTAAGAGCGGT                          ]
[+] EMBL OSS2468A             [          GACTTCCGAGCAAAGCCAAGTTGCTCACCGACTCACCCGTAGAGCTAGCTAGCCATGGCTGTTGCCGCAAGAGCCGCCGCCGTGGCGTGCCTCCTGGTCGTAGGCCTCGCGGCCGTGGCGGGGGTCGACGGCGCCACGGCGAGCTCCCCGGCCCCGGTGCCGGCCGTGGACTGCACGGCGGAGGCGCTGAAGTTGGCGGACTGCCTGGACTACGTAACCCCGGGGAAGACGGCGCCGAGCCGGCCNGTCGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU070626             [            CTTCCGAGCAAAGCCAAGTTGCTCACCGACTCACCCGTAGAGCTAGCTAGCCATGGCTGTTGCCGCAAGAGCCGCCGCCGTGGCGTGCCTCCTGGTCGTAGGCCTCGCGGCCGTGGCGGGGGTCGACGGCGCCACGGCGAGCTCCCCGGCCCCGGCGCCGGCCGTGGACTGCACGGCGGAGGCGCTGAAGTTGGCGGACTGCCTGGACTACGTGACCCCGGGGAAGACGGCGCCGAGCCGGCC GTCGAAGCTGTGCTGCGGGGAGGTGAAGGGCGCGCTCAAGGACAGCGCCGCCGTGGGCTGCCTGTGCGCCGCCTTCACCTCCAAGACGCTGCCCCTCCCGATCAACATCACCCGCGCCTTGCACCTCCCCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CF326587             [             TTCCGAGCAAAGCCAAGTTGCTCACCGACTCACCCGTAGAGCTAGCTAGCCATGGCTGTTGCCGCAAGAGCCGCCGCCGTGGCGTGCCTCCTGGTCGTAGGCCTCGCGGCCGTGGCGGGGGTCGACGGCGCCACGGCGAGCTCCCCGGCCCCGGCGCCGGCCGTGGACTGCACGGCGGAGGCGCTGAAGTTGGCGGACTGCCTGGACTACGTGACCCCGGGGAAGACGGCGCCGAGCCGGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CF326529             [                    CAAAGCCAAGTTGCTCACCGACTCACCCGTAGAGCTAGCTAGCCATGGCTGTTGCCGCAAGAGCCGCCGCCGTGGCGTGCCTCCTGGTCGTAGGCCTCGCGGCCGTGGCGGGGGTCGACGGCGCCACGGCGAGCTCCTCTGTCCCGGCGCCGGCCGTGGACTGCACGGCGGAGGCGCTGAAGTTGGCGGACTGCCTGGACTACGTGACCCCGGGGAAGACGGCGCCGAGCCGGCC GT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL OSS2404A             [                         CCAAGTTGCTCACCGACTCACCCGTAGAGCTAGCTAGCCATGGCTGTTGCCGCAAGAGCCG CGCCGTGG GTGCCTCCTGGTCGTAGGCCTCGCGGCCGTGGCGGGGGTCGACGGCGCCACGNCGAGCTCCCCGGCCCCGGCGCCGGCCGTGGACTGCACGGCGGAGGCGCTGAAGTTGGCGGACTNCCTGGACTACGTGACCCCGGGGAAGACGGCGCCGAGCCGCCC GTCGAAGCTGTGCTGCGGGGAGGTGAAGGGCGCGCTCAAGGACAGCGCCGCCGTGGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB683229             [                                  TCACCGACTCACCCGTAGAGCTAGCTAGCCATGGCTGTTGCCGCAAGAGCCGCCGCCGTGGCGTGCCTCCTGGTCGTAGGCCTCGCGGCCGTGGCGGGGGTCGACGGCGCCACGGCGAGCTCCCCGGCCCCGGCGCCGGCCGTGGACTGCACGGCGGAGGCGCTGAAGTTGGCGGACTGCCTGGACTACGTGACCCCGGGGAAGACGGCGCCGAGCCGGCC GTCGAAGCTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CA756724             [                                                                                                                                                                                                                                                                                                                                                  AAGACGCTGCCCCTCCCGATCAACATCACCCGCGCCTTGCACCTCCCCGCCGCCTGCGGCGCCGACGCCTCCGCCTTCAGCAAGTGCCTCGCACCGGCGCCGTCGCCGTCCGTGGCCCCGGGGACATCGTCCGGCAGCGGCGGTGCGGCAGCGGCACCGGCGAAGGGCGCCGCCGCAGCGAGGTCTCCGATGGCATCGACCACCGCCGTGCTCGTCGTCGCCGCCGCCGTGGCAGC                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU174386             [                                                                                                                                                                                                                                                                                                                                                                                                                     CCTCCGCCTTCAGCAAGTGCCTCGCACCGGCGCCGTCGCCGTCCGTGGCCCCGGGGACATCGTCCGGCAGCGGCGGTGCGGCAGCGGCACCGGCGAAGGGCGCCGCCGCAGCGAGGTCTCCGATGGCATCGACCACCGCCGTGCTCGTCGTCGCCGCCGCCGTGGCAGCTCCTCTGCTCGCCTTCTTTCACTTCTGATCGAGGAGTCCTTTCGTAGCCTCATTACATTCTACAGTTTGTCGTTGTGATCGTGATTAGACTCGGTGACTTTTTGTTGTGACAATTTGAGTTTACTGCATGCATGCACCCTGCCGTGATTAATTTAGCTCTCCAGAGTGAGCATTCATATTTAAAATAGTTTCCGTGAGTTATTTTTAATTTGTATCGTTATATGTGCATCATATTATTAAGAGCGGTTAAATTTGACAAAaa           ]


>consensus_14261#0 CCTCTGCTCCGACTTCCGAGCAAAGCCAAGTTGCTCACCGACTCACCCGTAGAGCTAGCT AGCCATGGCTGTTGCCGCAAGAGCCGCCGCCGTGGCGTGCCTCCTGGTCGTAGGCCTCGC GGCCGTGGCGGGGGTCGACGGCGCCACGGCGAGCTCCCCGGCCCCGGCGCCGGCCGTGGA CTGCACGGCGGAGGCGCTGAAGTTGGCGGACTGCCTGGACTACGTGACCCCGGGGAAGAC GGCGCCGAGCCGGCCGTCGAAGCTGTGCTGCGGGGAGGTGAAGGGCGCGCTCAAGGACAG CGCCGCCGTGGGCTGCCTGTGCGCCGCCTTCACCTCCAAGACGCTGCCCCTCCCGATCAA CATCACCCGCGCCTTGCACCTCCCCGCCGCCTGCGGCGCCGACGCCTCCGCCTTCAGCAA GTGCCTCGCACCGGCGCCGTCGCCGTCCGTGGCCCCGGGGACATCGTCCGGCAGCGGCGG TGCGGCAGCGGCACCGGCGAAGGGCGCCGCCGCAGCGAGGTCTCCGATGGCATCGACCAC CGCCGTGCTCGTCGTCGCCGCCGCCGTGGCAGCTCCTCTGCTCGCCTTCTTTCACTTCTG ATCGAGGAGTCCTTTCGTAGCCTCATTACATTCTACAGTTTGTCGTTGTGATCGTGATTA GACTCGGTGACTTTTTGTTGTGACAATTTGAGTTTACTGCATGCATGCACCCTGCCGTGA TTAATTTAGCTCTCCAGAGTGAGCATTCATATTTAAAATAGTTTCCGTGAGTTATTTTTA ATTTGTATCGTTATATGTGCATCATATTATTAAGAGCGGTTAAATTTGACAAATTGGCTA CAAAGT



consensusID : consensus_14261#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 607
fasta sequence
                              [TCCGACTTCCGAGCAAAGCCAAGTTGCTCACCGACTCACCCGTAGAGCTAGCTAGCCATGGCTGTTGCCGCAAGAGCCGCCGCCGTGGCGTGCCTCCTGGTCGACGGCGCCACGGCGAGCTCCCCGGCCCCGGCGCCGGCCGTGGACTGCACGGCGGAGGCGCTGAAGTTGGCGGACTGCCTGGACTACGTGACCCCGGGGAAGACGGCGCCTTCAGCAAGTGCCTCGCACCGGCGCCGTCGCCGTCCGTGGCCCCGGGGACATCGTCC-GGCA-G-CGG-CGGTGCGGCAGCGGCACCGGCGAAGGGCGCCGCCGCAGCGAGGTCTCCGATGGCATCGACCACCGCCGTGCTCGTCGTCGCCGCCGCCGTGGCAGCTCCTCTGCTCGCCTTCTTTCACTTCTGATCGAGGAGTCCTTTCGTAGCCTCATTACATTCTACAGTTTGTCGTTGTGATCGTGATTAGACTCGGTGACTTTTTGTTGTGACAATTTGAGTTTACTGCATGCATGCACCCTGCCGTGATTAATTTAGCTCTCCAGAGTGAGCATTCATATTTAAAATAGTTTCCGTGAGTTATTATTACTTGTATCGGTATATGTGCATCATATT]

[+] EMBL CA753993             [TCCGACTTCCGAGCAAAGCCAAGTTGCTCACCGACTCACCCGTAGAGCTAGCTAGCCATGGCTGTTGCCGCAAGAGCCGCCGCCGTGGCGTGCCTCCTGGTCGACGGCGCCACGGCGAGCTCCCCGGCCCCGGCGCCGGCCGTGGACTGCACGGCGGAGGCGCTGAAGTTGGCGGACTGCCTGGACTACGTGACCCCGGGGAAGACGGCGCCTTCAGCAAGTGCCTCGCACCGGCGCCGTCGCCGTCCGTGGCCCCGGGGACATCGTCC GGCA G CGG CGGTGCGGCAGCGGCACCGGCGAAGGGCGCCGCCGCAGCGAGGTCTCCGATGGCATCGACCACCGCCGTGCTCGTCGTCGCCGCCGCCGTGGCAGCTCCTCTGCTCGCCTTCTTTCACTTCTGATCGAGGAGTCCTTTCGTAGCCTCATTACATTCTACAGTTTGTCGTTGTGATCGTGATTAGACTCGGTGACTTTTTGTTGTGACAATTTGAGTTTACTGCATGCATGCACCCTGCCGTGATTAATTTAGCTCTCCAGAGTGAGCATTCATATTTAAAATAGTTTCCGTGAGTTATTATTACTTGTATCGGTATATGTGCATCATATT]
[+] EMBL AU086035             [                                                                                                                                                                                                                              GCCTCGCACCGGCGCCGTCGCCGTCCGTGGCCCCGGGGACATCGTCCNGTCATGTCGGTCGGTGCGGCAGCGGNACCGGCGAAGGGCGCCGCCGCAGCGAGGTCTCCGATGGCATCGACCA CGCCGTGCTCGTCGTCGCCGCCGCCGTGGCAGCTCCTCTGCTCGCCTTCTTTCACTTCTGATCGAGGAGTCCTTTCGTAGCCNCATTACATTCTACAGTTTGTCGTTGTGATCGTGATTAGACTCGGTGACTTTTTGTTGTGACAATTTGAGTTTACTGCATGCATGCACCCTGCCGTGATTAATTTAGCTCTCCAGAGTGAGCATTCATATTTAAAA                                                 ]


>consensus_14261#1 TCCGACTTCCGAGCAAAGCCAAGTTGCTCACCGACTCACCCGTAGAGCTAGCTAGCCATG GCTGTTGCCGCAAGAGCCGCCGCCGTGGCGTGCCTCCTGGTCGACGGCGCCACGGCGAGC TCCCCGGCCCCGGCGCCGGCCGTGGACTGCACGGCGGAGGCGCTGAAGTTGGCGGACTGC CTGGACTACGTGACCCCGGGGAAGACGGCGCCTTCAGCAAGTGCCTCGCACCGGCGCCGT CGCCGTCCGTGGCCCCGGGGACATCGTCCGGCAGCGGCGGTGCGGCAGCGGCACCGGCGA AGGGCGCCGCCGCAGCGAGGTCTCCGATGGCATCGACCACCGCCGTGCTCGTCGTCGCCG CCGCCGTGGCAGCTCCTCTGCTCGCCTTCTTTCACTTCTGATCGAGGAGTCCTTTCGTAG CCTCATTACATTCTACAGTTTGTCGTTGTGATCGTGATTAGACTCGGTGACTTTTTGTTG TGACAATTTGAGTTTACTGCATGCATGCACCCTGCCGTGATTAATTTAGCTCTCCAGAGT GAGCATTCATATTTAAAATAGTTTCCGTGAGTTATTATTACTTGTATCGGTATATGTGCA TCATATT



consensusID : consensus_14261#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 451
fasta sequence
                              [GACCTTCCCGCCGCCTGGGGGGCCGACGCCTCCGCCTTCAGCAAGTGCCTTGCACCGGGGCCGTTGCCGTCCGTGGCCCCGGGGACATTGTCCGGCAGCGGCGGTGGGGCAGCGGCCCCGGCGAAGGGGGCCCCCGCAGGGAGGTTTTCGATGGCATTGACCCCCCCCGTGCTTGTTGTTGCCGCCGCCGTGGCAGGTCCTTTGGTTGCCTTTTTTCACTTTTGATTGAGGAGTCCTTTTGTAGCCTCATTACATTTTACAGTTTGTTGTTGGGATTGGGATTAGACTCGGGGGCTTTTTGTTGTGACAATTTGAGTTTTCTGCAAGCATGCCCCCTGCCGGGATTAATTTAGCTTTCCCGAGGGGGCATTCATATTTAAAATAGTTTCCGGGAGTTATTTTTAATTTGTATCGTTATAAGGGCCTCATATTATTTAGAAGGGGTAAATTT]

[-] EMBL CB683641             [GACCTTCCCGCCGCCTGGGGGGCCGACGCCTCCGCCTTCAGCAAGTGCCTTGCACCGGGGCCGTTGCCGTCCGTGGCCCCGGGGACATTGTCCGGCAGCGGCGGTGGGGCAGCGGCCCCGGCGAAGGGGGCCCCCGCAGGGAGGTTTTCGATGGCATTGACCCCCCCCGTGCTTGTTGTTGCCGCCGCCGTGGCAGGTCCTTTGGTTGCCTTTTTTCACTTTTGATTGAGGAGTCCTTTTGTAGCCTCATTACATTTTACAGTTTGTTGTTGGGATTGGGATTAGACTCGGGGGCTTTTTGTTGTGACAATTTGAGTTTTCTGCAAGCATGCCCCCTGCCGGGATTAATTTAGCTTTCCCGAGGGGGCATTCATATTTAAAATAGTTTCCGGGAGTTATTTTTAATTTGTATCGTTATAAGGGCCTCATATTATTTAGAAGGGGTAAATTT]


>consensus_14261#2 GACCTTCCCGCCGCCTGGGGGGCCGACGCCTCCGCCTTCAGCAAGTGCCTTGCACCGGGG CCGTTGCCGTCCGTGGCCCCGGGGACATTGTCCGGCAGCGGCGGTGGGGCAGCGGCCCCG GCGAAGGGGGCCCCCGCAGGGAGGTTTTCGATGGCATTGACCCCCCCCGTGCTTGTTGTT GCCGCCGCCGTGGCAGGTCCTTTGGTTGCCTTTTTTCACTTTTGATTGAGGAGTCCTTTT GTAGCCTCATTACATTTTACAGTTTGTTGTTGGGATTGGGATTAGACTCGGGGGCTTTTT GTTGTGACAATTTGAGTTTTCTGCAAGCATGCCCCCTGCCGGGATTAATTTAGCTTTCCC GAGGGGGCATTCATATTTAAAATAGTTTCCGGGAGTTATTTTTAATTTGTATCGTTATAA GGGCCTCATATTATTTAGAAGGGGTAAATTT



consensusID : consensus_14261#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 416
fasta sequence
                              [TTGCACCTCTGCTCCGACTTCCGAGCAAAGCCAAGTTGCTCACCGACTCACCCGTAGAGCTAGCTAGCCATGGCTGTTGCCGCAAGAGCCGCCGCCGTGGCGTGCCTCCGATGGCATCGACCACCGCCGTGCTCGTCGTCGCCGCCGCCGTGGCAGCTCCTCTGCTCGCCTTCTTTCACTTCTGATCGAGGAGTCCTTTCGTAGCCTCATTACATTCTACAGTTTGTCGTTGTGATCGTGATTAGACTCGGTGACTTTTTGTTGTGACAATTTGAGTTTACTGCATGCATGCACCCTGCCGTGATTAATTTAGCTCTCCAGAGTGAGCATTCATATTTAAAATAGTTTCCGTGAGTTATTTTTAATTTGTATCGTTATATGTGCATCATATTATTAAGAGCGGTTAAATTTAAAAA]

[+] EMBL CF334385             [TTGCACCTCTGCTCCGACTTCCGAGCAAAGCCAAGTTGCTCACCGACTCACCCGTAGAGCTAGCTAGCCATGGCTGTTGCCGCAAGAGCCGCCGCCGTGGCGTGCCTCCGATGGCATCGACCACCGCCGTGCTCGTCGTCGCCGCCGCCGTGGCAGCTCCTCTGCTCGCCTTCTTTCACTTCTGATCGAGGAGTCCTTTCGTAGCCTCATTACATTCTACAGTTTGTCGTTGTGATCGTGATTAGACTCGGTGACTTTTTGTTGTGACAATTTGAGTTTACTGCATGCATGCACCCTGCCGTGATTAATTTAGCTCTCCAGAGTGAGCATTCATATTTAAAATAGTTTCCGTGAGTTATTTTTAATTTGTATCGTTATATGTGCATCATATTATTAAGAGCGGTTAAATTTAAAAA]


>consensus_14261#3 TTGCACCTCTGCTCCGACTTCCGAGCAAAGCCAAGTTGCTCACCGACTCACCCGTAGAGC TAGCTAGCCATGGCTGTTGCCGCAAGAGCCGCCGCCGTGGCGTGCCTCCGATGGCATCGA CCACCGCCGTGCTCGTCGTCGCCGCCGCCGTGGCAGCTCCTCTGCTCGCCTTCTTTCACT TCTGATCGAGGAGTCCTTTCGTAGCCTCATTACATTCTACAGTTTGTCGTTGTGATCGTG ATTAGACTCGGTGACTTTTTGTTGTGACAATTTGAGTTTACTGCATGCATGCACCCTGCC GTGATTAATTTAGCTCTCCAGAGTGAGCATTCATATTTAAAATAGTTTCCGTGAGTTATT TTTAATTTGTATCGTTATATGTGCATCATATTATTAAGAGCGGTTAAATTTAAAAA



consensusID : consensus_14261#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 233
fasta sequence
                              [ACCGTANACTACTAGCCATGGCTGTCGCCGCAAGACCGCCGCCGTGGCGTGCCTCCTGGTCGTACGCCTCCCAGCCGTGGCGGGGGTCGACGGCGCGACNGCGAACTCCCCGTCCCNGGCGCCGGCGCNNGNCGNTGACTGCNCCGCGGAAGCCCTCCAACGTNGCCGACTGCCTGNACTACGTNACCCCNGGGAAGANAGNGCCTAGCCGGCCGTCGAACCATTGNTNCGGG]

[+] EMBL BE228687             [ACCGTANACTACTAGCCATGGCTGTCGCCGCAAGACCGCCGCCGTGGCGTGCCTCCTGGTCGTACGCCTCCCAGCCGTGGCGGGGGTCGACGGCGCGACNGCGAACTCCCCGTCCCNGGCGCCGGCGCNNGNCGNTGACTGCNCCGCGGAAGCCCTCCAACGTNGCCGACTGCCTGNACTACGTNACCCCNGGGAAGANAGNGCCTAGCCGGCCGTCGAACCATTGNTNCGGG]


>consensus_14261#4 ACCGTANACTACTAGCCATGGCTGTCGCCGCAAGACCGCCGCCGTGGCGTGCCTCCTGGT CGTACGCCTCCCAGCCGTGGCGGGGGTCGACGGCGCGACNGCGAACTCCCCGTCCCNGGC GCCGGCGCNNGNCGNTGACTGCNCCGCGGAAGCCCTCCAACGTNGCCGACTGCCTGNACT ACGTNACCCCNGGGAAGANAGNGCCTAGCCGGCCGTCGAACCATTGNTNCGGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14261#2      ------------------------------------------------------------
consensus_14261#3      ------------------------------------------------------------
consensus_14261#1      ------------------------------------------------------------
consensus_14261#0      CCTCTGCTCCGACTTCCGAGCAAAGCCAAGTTGCTCACCGACTCACCCGTAGAGCTAGCT 60
consensus_14261#4      ------------------------------------------------------------
                                                                                   

consensus_14261#2      ------------------------------------------------------------
consensus_14261#3      ------------------------------------------------------------
consensus_14261#1      ------------------------------------------------------------
consensus_14261#0      AGCCATGGCTGTTGCCGCAAGAGCCGCCGCCGTGGCGTGCCTCCTGGTCGTAGGCCTCGC 120
consensus_14261#4      ------------------------------------------------------------
                                                                                   

consensus_14261#2      ------------------------------------------------------------
consensus_14261#3      ------------------------------------------------------------
consensus_14261#1      ------------------------------------------------------------
consensus_14261#0      GGCCGTGGCGGGGGTCGACGGCGCCACGGCGAGCTCCCCGGCCCCGGCGCCGGCCGTGGA 180
consensus_14261#4      ------------------------------------------------------------
                                                                                   

consensus_14261#2      ------------------------------------------------------------
consensus_14261#3      ------------------------------------------------------------
consensus_14261#1      --------------TCCGACTTCCGAGCAAAGCCAAGTTGCTCACCGACTCACCCGTAGA 46
consensus_14261#0      CTGCACGGCGGAGGCGCTGAAGTTGGCGGACTGCCTGGACTACGTGACCCCGGGGAAGAC 240
consensus_14261#4      ------------------------------------------------------------
                                                                                   

consensus_14261#2      ------------------------------------------------------------
consensus_14261#3      ------------------------------------------------------------
consensus_14261#1      GCTAGCTAGCCATGGCTGTTGCCGCAAGAGCCGCCGCCGTGGCGTGCCTCCTGGTCGACG 106
consensus_14261#0      GGCGCCGAGCCGGCCGTCGAAGCTGTGCTGCGGGGAGGTGAAGGGCGCGCTCAAGGACAG 300
consensus_14261#4      ------------------------------------------------------------
                                                                                   

consensus_14261#2      ------------------------------------------------------------
consensus_14261#3      ------------------------------------------------------------
consensus_14261#1      GCGCCACGGCGAGCTCCCCGGCCCCGGCGCCGGCCGTGGACTGCACGGCGGAGGCGCTGA 166
consensus_14261#0      CGCCGCCGTGGGCTGCCTGTGCGCCGCCTTCACCTCCAAGACGCTGCCCCTCCCGATCAA 360
consensus_14261#4      ------------------------------------------------------------
                                                                                   

consensus_14261#2      ----------------GACCTTCCCGCCGCCTGGGGGGCCGACGCCTCCGCCTTCAGCAA 44
consensus_14261#3      ---------------------------------------TTGCACCTCTGCTC----CGA 17
consensus_14261#1      AGTTGGCGGACTGCCTGGACTACGTGACCCCGGGGAAGACGGCGCCTTCA------GCAA 220
consensus_14261#0      CATCACCCGCGCCTTGCACCTCCCCGCCGCCTGCGGCGCCGACGCCTCCGCCTTCAGCAA 420
consensus_14261#4      ------------------------------------------------------------
                                                                                   

consensus_14261#2      GTGCCTTGCACCGGGGCCGTTGCCGTCCGTGGCCCCGGGGACATTGTCCGGCAGCGGCGG 104
consensus_14261#3      CTTCCGAGCAAAGCCAA-GTTGCTCACCGACTCACCCGTAGAGCTAGCTAGCCATGGCTG 76
consensus_14261#1      GTGCCTCGCACCGGCGCCGTCGCCGTCCGTGGCCCCGGGGACATCGTCCGGCAGCGGCGG 280
consensus_14261#0      GTGCCTCGCACCGGCGCCGTCGCCGTCCGTGGCCCCGGGGACATCGTCCGGCAGCGGCGG 480
consensus_14261#4      ----------------------------------ACCGT-ANACTA-CTAGCCATGGCTG 24
                                                          * *         *  **   *** *

consensus_14261#2      TGGGGCAGCGGCCCCGGCGAAGGGGGCCCCCGCAGGGAGGTTTTCGATGGCATTGACCCC 164
consensus_14261#3      TTG-----------CCGCAAGAGCCGCCGCCGTGGCGTG-CCTCCGATGGCATCGACCAC 124
consensus_14261#1      TGCGGCAGCGGCACCGGCGAAGGGCGCCGCCGCAGCGAGGTCTCCGATGGCATCGACCAC 340
consensus_14261#0      TGCGGCAGCGGCACCGGCGAAGGGCGCCGCCGCAGCGAGGTCTCCGATGGCATCGACCAC 540
consensus_14261#4      TCG-----------CCGCAAGA-CCGCCGCCGTGGCGTGCCTCCTGGTCGTACGCCTCCC 72
                       *             * ** *     *** ***  * * *      * * * *     * *

consensus_14261#2      CCCCGTGCTTGTTGTTGCCGCCGCCGTGGCAGGTCCTTTGGTTGCCTTTTTTCACTTTTG 224
consensus_14261#3      CGCCGTGCTCGTCGTCGCCGCCGCCGTGGCAGCTCCTCTGCTCGCCTTCTTTCACTTCTG 184
consensus_14261#1      CGCCGTGCTCGTCGTCGCCGCCGCCGTGGCAGCTCCTCTGCTCGCCTTCTTTCACTTCTG 400
consensus_14261#0      CGCCGTGCTCGTCGTCGCCGCCGCCGTGGCAGCTCCTCTGCTCGCCTTCTTTCACTTCTG 600
consensus_14261#4      AGCCGTGGCGGGGGTCGACGGCGCGACNGCGAACTCCCCGTC--CCNGGCGCCGGCGCNN 130
                         *****   *  ** * ** ***    **     *   *    **      *       

consensus_14261#2      ATTGAGGAGTCCTTT-TGTAGCCTCATTACATTTTACAGTTTGTTGTTGGGATTGGGATT 283
consensus_14261#3      ATCGAGGAGTCCTTT-CGTAGCCTCATTACATTCTACAGTTTGTCGTTGTGATCGTGATT 243
consensus_14261#1      ATCGAGGAGTCCTTT-CGTAGCCTCATTACATTCTACAGTTTGTCGTTGTGATCGTGATT 459
consensus_14261#0      ATCGAGGAGTCCTTT-CGTAGCCTCATTACATTCTACAGTTTGTCGTTGTGATCGTGATT 659
consensus_14261#4      GNCGNTGACTGCNCCGCGGAAGCCCTCCAACGTNGCCGACTGCCTGNACTACGTNACCCC 190
                          *  ** * *     * *  * *   *   *   *   *    *              

consensus_14261#2      AGACTCGGGGGCTTTTTGTTGTGACAATTTGAGTTTTCTGCAAGCATGCCCCCTGCCGGG 343
consensus_14261#3      AGACTCGGTGACTTTTTGTTGTGACAATTTGAGTTTACTGCATGCATGCACCCTGCCGTG 303
consensus_14261#1      AGACTCGGTGACTTTTTGTTGTGACAATTTGAGTTTACTGCATGCATGCACCCTGCCGTG 519
consensus_14261#0      AGACTCGGTGACTTTTTGTTGTGACAATTTGAGTTTACTGCATGCATGCACCCTGCCGTG 719
consensus_14261#4      NGGGAAGANAGNGCCTAGCCG-GCCGTCGAACCATTGNTNCGGG---------------- 233
                        *    *        * *  * * *         **  * *  *                

consensus_14261#2      ATTAATTTAGCTTTCCCGAGGGGGCATTCATATTTAAAATAGTTTCCGGGAGTTATTTTT 403
consensus_14261#3      ATTAATTTAGCTCTCCAGAGTGAGCATTCATATTTAAAATAGTTTCCGTGAGTTATTTTT 363
consensus_14261#1      ATTAATTTAGCTCTCCAGAGTGAGCATTCATATTTAAAATAGTTTCCGTGAGTTATTATT 579
consensus_14261#0      ATTAATTTAGCTCTCCAGAGTGAGCATTCATATTTAAAATAGTTTCCGTGAGTTATTTTT 779
consensus_14261#4      ------------------------------------------------------------
                                                                                   

consensus_14261#2      AATTTGTATCGTTATAAGGGCCTCATATTATTTAGAAGGGGTAAATTT------------ 451
consensus_14261#3      AATTTGTATCGTTATATGTGCATCATATTATTAAGAGCGGTTAAATTTAAAAA------- 416
consensus_14261#1      A-CTTGTATCGGTATATGTGCATCATATT------------------------------- 607
consensus_14261#0      AATTTGTATCGTTATATGTGCATCATATTATTAAGAGCGGTTAAATTTGACAAATTGGCT 839
consensus_14261#4      ------------------------------------------------------------
                                                                                   

consensus_14261#2      -------
consensus_14261#3      -------
consensus_14261#1      -------
consensus_14261#0      ACAAAGT 846
consensus_14261#4      -------
                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)