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Oryza sativa
cluster # 14279 cluster # 14279       Sequences # 15       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14279#0 length = 1147 sequences # 14  
consensus_14279#1 length = 621 sequences # 1  

consensusID : consensus_14279#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 1147
fasta sequence
                              [ATGGGATCGCCGATCAGTGAGCGATTCGGTGCAGGCAACTGATAAGGAGGGAGGATCTCTCCGCCGACTCAGCACCGTCCGTTTCGGGACGTGGTGCCGTTTTGGCCCCGCGCCGAAGCTTCTCCCCTTTGCAGTTATCAAATTCCCCTTGCAGCCACGCAGATTTACGCCGCGCCCCCACGCAACCCAAAAGTTCAGCGTAAACTTGCCTATCAACAAAACTACAGCTCAGGCGGCCACGCGAAATCGCGAGGTTTCACGTACCAAAAGCGCAAAAATCCACTCGGATTCCACGCGGCCGAGCCACTGCACGTGGGCGCCCACGACGCGCCCCCGTATCGATCGGCACCGCGCTTTCCTCCTCCTGATCTTACCCGCTACTATATCATCATCTGCTTGCTTTCCCCCCGAGAGTCCACGGCCTCCTGCTCCTCTCGATCCAAGATAATTTCACTCCAGCGTGCGTCGGCCATGTCGAGCTTGATGGACAAGGCGAAAGGGTTCGTGGCGGAGAAGATCGCGCACATCCCAAAGCCGGAGGCGTCGCTGGACAGCTTGTCGTTCAAGGGGATGAGCCGCGAGTGCATCACCGTGCACAGCAACGTCAACGTCTCCAACCCCTACGACCACCGCCTCCCCATCTGCGAGCTCACCTACACCCTCAAGTGC-GCCGGCAACGTTGTGGCGTCCGGCACGATGCCCGATCCGGGGTGGATCGCG-G-CGAGCGAC-ACGACGAAGCTGGAGATACCGGCCAAGATCCCCTA-CGACTTCCTCATCTCGCTGGTGAAGGACGTGGGCCGGGACTGGGACATCG-ACTACCAGCTCGACGTCG-GCCTCACCATCGACCT-CCCCATCGTCGGCAACTTCA-CCAT-CCCGCTCTCCACCAGCGGCGAGATGAAGCTCCCCACACTCAAGGACATGTT-CT-AATTAT-CTTAT-CT-CT-AAT-CT-CAT-CAACCAACT-CCGATCGAT-CGAACTCTCTGTATGTGTGATGTGTCTCGCGAATAATGGCAGCTGCTCTGCACCTGTGTTCTTCT-TGCCCTGCATAGTATAGCATGGCTGTATGAGCAGCTGAAAAATTACCTCTATTCCTAA-TGGTTGCAATAATAAGC-TAGAGAACTGAACTTTTGCTTGTTTAAAAAAAAAAAAAAAA]

[+] EMBL AK061818             [ATGGGATCGCCGATCAGTGAGCGATTCGGTGCAGGCAACTGATAAGGAGGGAGGATCTCTCCGCCGACTCAGCACCGTCCGTTTCGGGACGTGGTGCCGTTTTGGCCCCGCGCCGAAGCTTCTCCCCTTTGCAGTTATCAAATTCCCCTTGCAGCCACGCAGATTTACGCCGCGCCCCCACGCAACCCAAAAGTTCAGCGTAAACTTGCCTATCAACAAAACTACAGCTCAGGCGGCCACGCGAAATCGCGAGGTTTCACGTACCAAAAGCGCAAAAATCCACTCGGATTCCACGCGGCCGAGCCACTGCACGTGGGCGCCCACGACGCGCCCCCGTATCGATCGGCACCGCGCTTTCCTCCTCCTGATCTTACCCGCTACTATATCATCATCTGCTTGCTTTCCCCCCGAGAGTCCACGGCCTCCTGCTCCTCTCGATCCAAGATAATTTCACTCCAGCGTGCGTCGGCCATGTCGAGCTTGATGGACAAGGCGAAAGGGTTCGTGGCGGAGAAGATCGCGCACATCCCAAAGCCGGAGGCGTCGCTGGACAGCTTGTCGTTCAAGGGGATGAGCCGCGAGTGCATCACCGTGCACAGCAACGTCAACGTCTCCAACCCCTACGACCACCGCCTCCCCATCTGCGAGCTCACCTACACCCTCAAGTGC GCCGGCAACGTTGTGGCGTCCGGCACGATGCCCGATCCGGGGTGGATCGCG G CGAGCGAC ACGACGAAGCTGGAGATACCGGCCAAGATCCCCTA CGACTTCCTCATCTCGCTGGTGAAGGACGTGGGCCGGGACTGGGACATCG ACTACCAGCTCGACGTCG GCCTCACCATCGACCT CCCCATCGTCGGCAACTTCA CCAT CCCGCTCTCCACCAGCGGCGAGATGAAGCTCCCCACACTCAAGGACATGTT CT AATTAT CTTAT CT CT AAT CT CAT CAACCAACT CCGATCGAT CGAACTCTCTGTATGTGTGATGTGTCTCGCGAATAATGGCAGCTGCTCTGCACCTGTGTTCTTCT TGCCCTGCATAGTATAGCATGGCTGTATGAGCGGCTGAAAAATTACCTCTATTCCTAA TGGTTGCAATAATAAGC                                          ]
[+] EMBL AK066062             [                                                                                                                                                                                  CACGCAACCCAAAAGTTCAGCGTAAACTTGCCTATCAACAAAACTACAGCTCAGGCGGCCACGCGAAATCGCGAGGTTTCACGTACCAAAAGCGCAAAAATCCACTCGGATTCCACGCGGCAGAGCCACTGCACGTGGGCGCCCACGACGCGCCCCCGTATCGATCGGCACCGCGCTTTCCTCCTCCTGATCTTACCCGCTACTATATCATCATCTGCTTGCTTTCCCCCCGAGAGTCCACGGCCTCCTGCTCCTCTCGATCCAAGATAATTTCACTCCAGCGTGCGTCGGCCATGTCGAGCTTGATGGACAAGGCGAAAGGGTTCGTGGCGGAGAAGATCGCGCACATCCCAAAGCCGGAGGCGTCGCTGGACAGCTTGTCGTTCAAGGGGATGAGCCGCGAGTGCATCACCGTGCACAGCAACGTCAACGTCTCCAACCCCTACGACCACCGCCTCCCCATCTGCGAGCTCACCTACACCCTCAAGTGC GCCGGCAACGTTGTGGCGTCCGGCACGATGCCCGATCCGGGGTGGATCGCG G CGAGCGAC ACGACGAAGCTGGAGATACCGGCCAAGATCCCCTA CGACTTCCTCATCTCGCTGGTGAAGGACGTGGGCCGGGACTGGGACATCG ACTACCAGCTCGACGTCG GCCTCACCATCGACCT CCCCATCGTCGGCAACTTCA CCAT CCCGCTCTCCACCAGCGGCGAGATGAAGCTCCCCACACTCAAGGACATGTT CT AATTAT CTTAT CT CT AAT CT CAT CAACCAACT CCGATCGAT CGAACTCTCTGTATGTGTGATGTGTCTCGCGAATAATGGCAGCTGCTCTGCACCTGTGTTCTTCT TGCCCTGCATAGTATAGCATGGCTGTATGAGCGGCTGAAAAATTACCTCTATTCCTAA TGGTTGCAATAATAAGC                                          ]
[+] EMBL CF278584             [                                                                                                                                                                                                                                                                                                                                                                                                                                         CTGCTCCTCTCGATCCAAGATAATTTCACTCCAGCGTGCGTCGGCCATGTCGAGCTTGATGGACAAGGCGAAAGGGTTCGTGGCGGAGAAGATCGCGCACATCCCAAAGCCGGAGGCGTCGCTGGACAGCTCGTCGTTCAAGGGGATGAGCCGCGAGTGCATCACCGTGCACAGCAACGTCAACGTCTCCAACCCCTACGACCACCGCCTCCCCATCTGCGAGCTCACCTACACCCTCAAGTGC GCCGGCAACGTTGTGGCGTCCGGCACGATGCCCGATCCGGGGTGGATCGCG G CGAGCGAC ACGACGAAGCTGGAGATACCGGCCAAGATCCCCTA CGACTTCCTCATCTCGCTGGTGAAGGACGTGGGCCGGGACTGGGACATCG ACTACCACCTCGACGTCG GCCTCACCATCGACCT CCCCATCGTCGGCAACTTCA CCAT CCCGCTCTCCACCAGCGGCGAGATGAAGCTCCCCACACTCAAGGACATGTT CT AATTAT CTTAT CT CT AAT CT CAT CAACCAACT CCGATCGAT CGAACTCTCTGTATGTGTGATGTGTCTCGCGAATAATGGCAGCTGCTCTGCACCTGTGTTCTTCT TGCC                                                                                                                  ]
[+] EMBL CF331158             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           gagtagaaaAGTGCTTCACCGTGCACAGCAACGTCAACGTCTCCAACCCCTACGACCACCGCCTCCCCATCTGCGAGCTCACCTACACCCTCAAGTGC GCCGGCAACGTTGTGGCGTCCGGCACGATGCCCGATCCGGGGTGGATCGCG G CGAGCGAC ACGACGAAGCTGGAGATACCGGCCAAGATCCCCTA CGACTTCCTCATCTCGCTGGTGAAGGACGTGGGCCGGGACTGGGACATCG ACTACCAGCTCGACGTCG GCCTCACCATCGACCT CCCCATCGTCGGCAACTTCA CCAT CCCGCTCTCCACCAGCGGCGAGATGAAGCTCCCCACACTCAAGGACATGTT CT AATTAT CTTAT CT CT AAT CT CAT CAACCAACT CCGATCGAT CGAACTCTCTGTATGTGTGATGTGTCTCGCGAATAATGGCAGCTGCTCTGCACCTGTGTTCTTCT TGCCCTGCATAGTATAGCATGGCTGTATGAGCGGCTGAAAAATTACCTCTATTCCTAA TGGTTGCAATAATAAGC TAGAGAAC                                 ]
[-] EMBL CB965336             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CCCTCAATTGCTTCCGGCATCGTTTTGGCGTCCGGCTCGATGCCCGATCCGGGTTGGATCGCGTGTCGATCGAC ACGACGAATCTGGAGATACCGGCCAAGATCCCCTA CGACTTCCTCATCTCGCTGGTGAAGGACGTGGGCCGGGACTGGGACATCG ACTACCAGCTCGACGTCG GCCTCACCATCGACCT CCCCATCGTCGGCAACTTCA CCATGCCCGCTCTCCACCAGCGGCGAGATGAAGCTCCCCACACTCAAGGACATGTTGCTGAATTATGCTTATGCTGCTGAATGCTGCATGCAACCAACTGCCGATCGATGCGAACTCTCTGTATGTGTGATGTGTCTCGCGAATAATGGCAGCTGCTCTGCACCTGTGTTCTTCT TGCCCTGCATAGTATAGCATGGCTGTATGAGCAGCTGAAAAATTACCTCTATTCCTAA TGGTTGCAATAATAAGC TAGAGAACTGA                              ]
[+] EMBL BI801638             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GC GCCGGCAAACTTGTGGC TCCGGCACGATGCCCGATCC GGGTGGATCGCG G CGAGCGACAACGACGAAGCTGGAGATACC GCCAAGATCCCCTA CGACTTCCTCATCTCGCTGGTGAAGGACGTGGGCCGGGACTGGGACATCG ACTACCAGCT GACGTCG GCCTCACCATCGACCT CCCCATCGTCGGCAACTTCA CCAT CCCGCTCTCCACCAGCGGCGAGATGAAGCTCCCCACACTCAAGGACATGTT CT AATTAT CTTAT CT CT AAT CT CAT CAACCAACT CCGATCGAT CGAACTCTCTGTATGTGTGATGTGTCTCGCGAATAATGGCAGCTGCTCTGCACCTGTGTTCTTCT TGCCCTGCATAGTATAGCATGGCTGTATGAGCAGCTGAAAAATTACCTCTATTCCTAA TGGTTGCAATAATAAGC TAGAGAACTGAACTTTTGCTTGTTTAAAAAAAAAA      ]
[-] EMBL CF331157             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CGGCAACGTTGTGGCGTCCGGCACGATGCCCGATCCGGGGTGGATCGCG G CGAGCGAC ACGACGAAGCTGGAGATACCGGCCAAGATCCCCTA CGACTTCCTCATCTCGCTGGTGAAGGACGTGGGCCGGGACTGGGACATCG ACTACCAGCTTGACGTCG GCCTCACCATGGACCT CCCCATCGTCGGCAATTTCA CCAT CCCGCTTTCCACCAGCGGGGAGATGAAGCTCCCCACACTCAAGGACATGTT CT AATTAT CTTAT CT CT AAT CT CAT CAACCAACT CCGATCGAT CGAACTCTCTGTATGTGTGATGTGTCTCGCGAATAATGGCAGCTGCTTTGCACCTGTGTTTTTCT TGCCCTGCATAGTATAGCATGGCTGTATGAGCGGCTGAAAAATTACCTCTATTCCTAA TGGTTGCAATAATAAGC TAGAGAACTGAACTTTTGCTAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CF312301             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGCAACGTTGTGGCGTCCGGCACGATGCCCGATCCGGGGTGGATCGCG G CGAGCGAC ACGACGAAGCTGGAGATACCGGCCAAGATCCCCTA CGACCTCCTCATCTCGCTGGTGAAGGACGTGGGCCGGGACTGGGACATCGAACTACCAGCTCGACGTCGNGCCTCACCATCGACCTCCCCCATCGTCGGCAACTTCACCCAT CCCGCTCTCCACCAGCGGCGAGATGAAGCTCCCCACACTCAAGGACATGTT CT AATTAT CTTAT CT CT AAT CT CAT CAACCAACT CCGATCGAT CGAACTCTCTGTATGTGTGATGTGTCTCGCGAATAATGGCAGCTGCTCTGCACCTGTGTTCTTCT TGCCCTGCATAGTATAGCATGGCTGTATGAGCGGCTGAAAAATTACCTCTATTCCTAA TGGTTGCAATAATAAGC TAGAGAACTGAACTTTTGCTTGTTAAAAAAA          ]
[-] EMBL BI306172             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AACGTTGTGGCGTCCGGCACGATGCCCGATCCGGGGTGGATCGCG G CGAGCGAC ACGACGAAGCTGGAGATACCGGCCAAGATCCCCTA CGACTTCCTCATCTCGCTGGTGAAGGACGTGGGCCGGGACTGGGACATCG ACTACCAGCTCGACGTCG GCCTCACCATCGACCT CCCCATCGTCGGCAACTTCA CCAT CCCGCTTTCCACCAGGGGGGAGATGAAGCTCCCCCCACTCAAGGACATGTT CT AATTAT CTTAT CT CT AAT CT CAT CAACCAACT CCGATCGAT CGAACTCTCTGTATGTGTGATGTGTCTCGCGAATAATGGCAGCTGCTTTGCACCTGTGTTTTTCT TGCCCTGCATAGTATAGCATGGCTGTATGAGCAGCTGAAAAATTACCTCTATTCCTAA TGGTTGCAATAATAAGC TAGAGAACTGAACTT                          ]
[-] EMBL BI305981             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AACGTTGTGGCGTCCGGCACGATGCCCGATCCGGGGTGGATCGCG G CGAGCGAC ACGACGAAGCTGGAGATACCGGCCAAGATCCCCTA CGACTTCCTCATTTCGCTGGTGAAGGACGTGGGCCGGGACTGGGACATCG ACTACCAGTTGGACGTCG GCCTCACCATCGACCT CCCCATGGTCGGCAACTTCA CCAT CCCGCTCTCCACCAGGGGCGAGATGAAGCTCCCCACACTCAAGGACATGTT CT AATTAT CTTAT CT CT AAT CT CAT CAACCAACT CCGATCGAT CGAACTCTCTGTATGTGTGATGTGTCTCGCGAATAATGGCAGCTGCTCTGCACCTGTGTTCTTCT TGCCCTGCATAGTATAGCATGGCTGTATGAGCAGCTGAAAAATTACCTCTATTCCTAA TGGTTGCAATAATAAGC TAGAGAACTGAACTT                          ]
[-] EMBL BI306006             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AACGTTGTGGCGTCCGGCACGATGCCCGATCCGGGGTGGATCGCG G CGAGCGAC ACGACGAAGCTGGAGATACCGGCCAAGATCCCCTA CGACTTCCTCATCTCGCTGGTGAAGGACGTGGGCCGGGACTGGGACATCG ACTACCAGCTCGAGGTGG GCCTCACCATCGACCT CCCCATGGTGGGCAATTTCA CCAT CCCGCTTTCCACCAGGGGCGAGATGAAGCTCCCCCCACTCAAGGACATGTT CT AATTAT CTTAT CT CT AAT CT CAT CAACCAACT CCGATCGAT CGAACTCTCGGTATGTGTGATGTGTCTCGCGAATAATGGCAGCTGCTCTGCACCTGTGTTTTTCT TGCCCTGCATAGTATAGCATGGCTGTATGAGCAGCTGAAAAATTACCTCTATTCCTAA TGGTTGCAATAATAAGC TAGAGAACTGAACTT                          ]
[-] EMBL BU673048             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GCGTCCGGCACGATGCCCGATCCGGGGTGGATCGCG G CGAGCGAC ACGACGAAGCTGGAGATACCGGCCAAGATCCCCTA CGACTTCCTCATCTCGCTGGTGAAGGACGTGGGCCGGGACTGGGACATCG ACTACCAGCTCGACGTCG GCCTCACCATCGACCT CCCCATCGTCGGCAACTTCA CCAT CCCGCTCTCCACCAGCGGCGAGATGAAGCTCCCCACACTCAAGGACATGTT CT AATTAT CTTAT CT CT AAT CT CAT CAACCAACT CCGATCGAT CGAACTCTCTGTATGTGTGATGTGTCTCGCGAATAATGGCAGCTGCTCTGCACCTGTGTTCTTCTGTGCCCTGCATAGTATAGCATGGCTGTATGAGCAGCTGAAAAATTACCTCTATTCCTAAGTGGTTGCAATAATAAGCNTAGAGAACTGAACTTT                         ]
[+] EMBL BI802547             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATCGCG G CGA CGAC ACGACGAAGCTGGAGATACCGGCCAAGATCCCCTATCGACTTCCTCATCTCGCTGGTGAAGGACGTGGGCCGGGACTGGTACATCG ACTACCAGCTCGACGTCG GCCTCACCATCGACCT CCCCATCGTCGGCAACTTCA CCAT CCCGCTCTCCACCAGCGGCGAGATGAAGCTCCCCACACTCAAGGACATGTT CTGAATTAT CTTAT CT CT AAT CT CAT CAACC ACT CCGATCGAT CGAACTCTCTGTATGTGTGATGTGTCTCGCGAATAATGGCAGCTGCTCTGCACCTGTGTTCTTCT TGCCCTGCATAGTATAGCATGGCTGTATGAGCAGCTGAAAAATTACCTCTATTCCTAA TGGTTGCAATAATAAGC TAGAGAACTGAACTTTTGCTTGTTTTAAAAAAAA       ]
[-] EMBL CF278585             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GAGATACCGGCCAAGATCCCCTA CGACTTCCTCATCTCGCTGGTGAAGGACGTGGGCCGGGACTGGGACATCG ACTACCAGCTCGACGTCG GCCTCACCATCGACCT CCCCATCGTCGGCAACTTCA CCAT CCCGCTCTCCACCAGCGGCGAGATGAAGCTCCCCACACTCAAGGACATGTT CT AATTAT CTTAT CT CT AAT CT CAT CAACCAACT CCGATCGAT CGAACTCTCTGTATGTGTGATGTGTCTCGCGAATAATGGCAGCTGCTCTGCACCTGTGTTCTTCT TGCCCTGCATAGTATAGCATGGCTGTATGAGCGGCTGAAAAATTACCTCTATTCCTAA TGGTTGCAATAATAAGC TAGAGAACTGAACTTTTGCTTGTTTAAAAAAAAA       ]


>consensus_14279#0 ATGGGATCGCCGATCAGTGAGCGATTCGGTGCAGGCAACTGATAAGGAGGGAGGATCTCT CCGCCGACTCAGCACCGTCCGTTTCGGGACGTGGTGCCGTTTTGGCCCCGCGCCGAAGCT TCTCCCCTTTGCAGTTATCAAATTCCCCTTGCAGCCACGCAGATTTACGCCGCGCCCCCA CGCAACCCAAAAGTTCAGCGTAAACTTGCCTATCAACAAAACTACAGCTCAGGCGGCCAC GCGAAATCGCGAGGTTTCACGTACCAAAAGCGCAAAAATCCACTCGGATTCCACGCGGCC GAGCCACTGCACGTGGGCGCCCACGACGCGCCCCCGTATCGATCGGCACCGCGCTTTCCT CCTCCTGATCTTACCCGCTACTATATCATCATCTGCTTGCTTTCCCCCCGAGAGTCCACG GCCTCCTGCTCCTCTCGATCCAAGATAATTTCACTCCAGCGTGCGTCGGCCATGTCGAGC TTGATGGACAAGGCGAAAGGGTTCGTGGCGGAGAAGATCGCGCACATCCCAAAGCCGGAG GCGTCGCTGGACAGCTTGTCGTTCAAGGGGATGAGCCGCGAGTGCATCACCGTGCACAGC AACGTCAACGTCTCCAACCCCTACGACCACCGCCTCCCCATCTGCGAGCTCACCTACACC CTCAAGTGCGCCGGCAACGTTGTGGCGTCCGGCACGATGCCCGATCCGGGGTGGATCGCG GCGAGCGACACGACGAAGCTGGAGATACCGGCCAAGATCCCCTACGACTTCCTCATCTCG CTGGTGAAGGACGTGGGCCGGGACTGGGACATCGACTACCAGCTCGACGTCGGCCTCACC ATCGACCTCCCCATCGTCGGCAACTTCACCATCCCGCTCTCCACCAGCGGCGAGATGAAG CTCCCCACACTCAAGGACATGTTCTAATTATCTTATCTCTAATCTCATCAACCAACTCCG ATCGATCGAACTCTCTGTATGTGTGATGTGTCTCGCGAATAATGGCAGCTGCTCTGCACC TGTGTTCTTCTTGCCCTGCATAGTATAGCATGGCTGTATGAGCAGCTGAAAAATTACCTC TATTCCTAATGGTTGCAATAATAAGCTAGAGAACTGAACTTTTGCTTGTTTAAAAAAAAA AAAAAAA



consensusID : consensus_14279#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 621
fasta sequence
                              [TGGACTGAAGAGTAGAAAGAGTCCCGGCCTCCTGCTCCTCTCGATCCAAGATAATTTCACTCCAGCGTGCGTCGGCCATGTCGAGCTTGATGGACAAGGCGAAAGGGTTCGTGGCGGAGAAGATCGCGCACATCCCAAAGCCGGAGGCGTCGCTGGACAGCTTGTCGTTCAAGGGGATGAGCCGCGAGTGCATCACCGTGCACAGCAACGTCAACGTCTCCAACCCCTACGACCACCGCCTCCCCATCTGCGAGCTCACCTACACCCTCAAGTGCGCCGGCAACGTTGTGGCGTCCGGCACGATGCCCGATCCGGGGTGGATCGCGGCGAGCGACACGACGAAGCTGGAGATACCGGCCAAGATCCCCTACGACCTCCTCATCTCGCTGGTGAAGGACGTGGGCCGGGACTGGGACATCGACTACCAGCTCGACGTCGGCCTCACCATCGACCTCCCCATCGTCGGCAACTTCACCATCCCGCTCTCCACCAGCGGCGAGATGAAGCTCCCCACACTCAAGGACATGTTCTAATTATCTTATCTCTAATCTCATCAACCAACTCCGATCGATCGAACTCTCTGTATGTGTGATGTGTCTCGCGAATAATGGCAGCTGCTCT]

[+] EMBL CF312300             [TGGACTGAAGAGTAGAAAGAGTCCCGGCCTCCTGCTCCTCTCGATCCAAGATAATTTCACTCCAGCGTGCGTCGGCCATGTCGAGCTTGATGGACAAGGCGAAAGGGTTCGTGGCGGAGAAGATCGCGCACATCCCAAAGCCGGAGGCGTCGCTGGACAGCTTGTCGTTCAAGGGGATGAGCCGCGAGTGCATCACCGTGCACAGCAACGTCAACGTCTCCAACCCCTACGACCACCGCCTCCCCATCTGCGAGCTCACCTACACCCTCAAGTGCGCCGGCAACGTTGTGGCGTCCGGCACGATGCCCGATCCGGGGTGGATCGCGGCGAGCGACACGACGAAGCTGGAGATACCGGCCAAGATCCCCTACGACCTCCTCATCTCGCTGGTGAAGGACGTGGGCCGGGACTGGGACATCGACTACCAGCTCGACGTCGGCCTCACCATCGACCTCCCCATCGTCGGCAACTTCACCATCCCGCTCTCCACCAGCGGCGAGATGAAGCTCCCCACACTCAAGGACATGTTCTAATTATCTTATCTCTAATCTCATCAACCAACTCCGATCGATCGAACTCTCTGTATGTGTGATGTGTCTCGCGAATAATGGCAGCTGCTCT]


>consensus_14279#1 TGGACTGAAGAGTAGAAAGAGTCCCGGCCTCCTGCTCCTCTCGATCCAAGATAATTTCAC TCCAGCGTGCGTCGGCCATGTCGAGCTTGATGGACAAGGCGAAAGGGTTCGTGGCGGAGA AGATCGCGCACATCCCAAAGCCGGAGGCGTCGCTGGACAGCTTGTCGTTCAAGGGGATGA GCCGCGAGTGCATCACCGTGCACAGCAACGTCAACGTCTCCAACCCCTACGACCACCGCC TCCCCATCTGCGAGCTCACCTACACCCTCAAGTGCGCCGGCAACGTTGTGGCGTCCGGCA CGATGCCCGATCCGGGGTGGATCGCGGCGAGCGACACGACGAAGCTGGAGATACCGGCCA AGATCCCCTACGACCTCCTCATCTCGCTGGTGAAGGACGTGGGCCGGGACTGGGACATCG ACTACCAGCTCGACGTCGGCCTCACCATCGACCTCCCCATCGTCGGCAACTTCACCATCC CGCTCTCCACCAGCGGCGAGATGAAGCTCCCCACACTCAAGGACATGTTCTAATTATCTT ATCTCTAATCTCATCAACCAACTCCGATCGATCGAACTCTCTGTATGTGTGATGTGTCTC GCGAATAATGGCAGCTGCTCT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14279#0      ATGGGATCGCCGATCAGTGAGCGATTCGGTGCAGGCAACTGATAAGGAGGGAGGATCTCT 60
consensus_14279#1      ------------------------------------------------------------
                                                                                   

consensus_14279#0      CCGCCGACTCAGCACCGTCCGTTTCGGGACGTGGTGCCGTTTTGGCCCCGCGCCGAAGCT 120
consensus_14279#1      ------------------------------------------------------------
                                                                                   

consensus_14279#0      TCTCCCCTTTGCAGTTATCAAATTCCCCTTGCAGCCACGCAGATTTACGCCGCGCCCCCA 180
consensus_14279#1      ------------------------------------------------------------
                                                                                   

consensus_14279#0      CGCAACCCAAAAGTTCAGCGTAAACTTGCCTATCAACAAAACTACAGCTCAGGCGGCCAC 240
consensus_14279#1      ------------------------------------------------------------
                                                                                   

consensus_14279#0      GCGAAATCGCGAGGTTTCACGTACCAAAAGCGCAAAAATCCACTCGGATTCCACGCGGCC 300
consensus_14279#1      ------------------------------------------------------------
                                                                                   

consensus_14279#0      GAGCCACTGCACGTGGGCGCCCACGACGCGCCCCCGTATCGATCGGCACCGCGCTTTCCT 360
consensus_14279#1      ------------------------------------------------------------
                                                                                   

consensus_14279#0      CCTCCTGATCTTACCCGCTACTATATCATCATCTGCTTGCTTTCCCCCCGAGAGTCCACG 420
consensus_14279#1      ---------------------------------TGGACTGAAGAGTAGAAAGAGTCC-CG 26
                                                        **               ******* **

consensus_14279#0      GCCTCCTGCTCCTCTCGATCCAAGATAATTTCACTCCAGCGTGCGTCGGCCATGTCGAGC 480
consensus_14279#1      GCCTCCTGCTCCTCTCGATCCAAGATAATTTCACTCCAGCGTGCGTCGGCCATGTCGAGC 86
                       ************************************************************

consensus_14279#0      TTGATGGACAAGGCGAAAGGGTTCGTGGCGGAGAAGATCGCGCACATCCCAAAGCCGGAG 540
consensus_14279#1      TTGATGGACAAGGCGAAAGGGTTCGTGGCGGAGAAGATCGCGCACATCCCAAAGCCGGAG 146
                       ************************************************************

consensus_14279#0      GCGTCGCTGGACAGCTTGTCGTTCAAGGGGATGAGCCGCGAGTGCATCACCGTGCACAGC 600
consensus_14279#1      GCGTCGCTGGACAGCTTGTCGTTCAAGGGGATGAGCCGCGAGTGCATCACCGTGCACAGC 206
                       ************************************************************

consensus_14279#0      AACGTCAACGTCTCCAACCCCTACGACCACCGCCTCCCCATCTGCGAGCTCACCTACACC 660
consensus_14279#1      AACGTCAACGTCTCCAACCCCTACGACCACCGCCTCCCCATCTGCGAGCTCACCTACACC 266
                       ************************************************************

consensus_14279#0      CTCAAGTGCGCCGGCAACGTTGTGGCGTCCGGCACGATGCCCGATCCGGGGTGGATCGCG 720
consensus_14279#1      CTCAAGTGCGCCGGCAACGTTGTGGCGTCCGGCACGATGCCCGATCCGGGGTGGATCGCG 326
                       ************************************************************

consensus_14279#0      GCGAGCGACACGACGAAGCTGGAGATACCGGCCAAGATCCCCTACGACTTCCTCATCTCG 780
consensus_14279#1      GCGAGCGACACGACGAAGCTGGAGATACCGGCCAAGATCCCCTACGACCTCCTCATCTCG 386
                       ************************************************ ***********

consensus_14279#0      CTGGTGAAGGACGTGGGCCGGGACTGGGACATCGACTACCAGCTCGACGTCGGCCTCACC 840
consensus_14279#1      CTGGTGAAGGACGTGGGCCGGGACTGGGACATCGACTACCAGCTCGACGTCGGCCTCACC 446
                       ************************************************************

consensus_14279#0      ATCGACCTCCCCATCGTCGGCAACTTCACCATCCCGCTCTCCACCAGCGGCGAGATGAAG 900
consensus_14279#1      ATCGACCTCCCCATCGTCGGCAACTTCACCATCCCGCTCTCCACCAGCGGCGAGATGAAG 506
                       ************************************************************

consensus_14279#0      CTCCCCACACTCAAGGACATGTTCTAATTATCTTATCTCTAATCTCATCAACCAACTCCG 960
consensus_14279#1      CTCCCCACACTCAAGGACATGTTCTAATTATCTTATCTCTAATCTCATCAACCAACTCCG 566
                       ************************************************************

consensus_14279#0      ATCGATCGAACTCTCTGTATGTGTGATGTGTCTCGCGAATAATGGCAGCTGCTCTGCACC 1020
consensus_14279#1      ATCGATCGAACTCTCTGTATGTGTGATGTGTCTCGCGAATAATGGCAGCTGCTCT----- 621
                       *******************************************************     

consensus_14279#0      TGTGTTCTTCTTGCCCTGCATAGTATAGCATGGCTGTATGAGCAGCTGAAAAATTACCTC 1080
consensus_14279#1      ------------------------------------------------------------
                                                                                   

consensus_14279#0      TATTCCTAATGGTTGCAATAATAAGCTAGAGAACTGAACTTTTGCTTGTTTAAAAAAAAA 1140
consensus_14279#1      ------------------------------------------------------------
                                                                                   

consensus_14279#0      AAAAAAA 1147
consensus_14279#1      -------
                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)