cluster # 14287

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Oryza sativa
cluster # 14287 cluster # 14287 Sequences # 16 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14287#0 length = 1002 sequences # 1

consensus_14287#1 length = 929 sequences # 14
consensus_14287#2 length = 286 sequences # 1

consensusID : consensus_14287#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1002
fasta sequence

                              [ACACGCTGCACCGCGCGCAGCCTCGAGCTCGAGGAGAGGGAGATTTGGCCCCCCGATGGCGAGGCCGAGGGCGCCGCTGCTGCGGCGGATGCTGCTGCTGTGCGCGGTGGCGGCCTCCTGCTCCTACTACCTCCTCGTCCTCCACGCGCAGGCCTCCGTGCCGCCGCGCTACGACGGGTTCGCCTACGGGGACGCCGCCACCGCCGCCTGGAAGGACACCATCCTCGTCGAGGCCTTCCTCGACCCGCTCTGCCCCGACAGCCGCGACGCCTGGGCGCCCCTCAGGCTCGCCGTCGACCGCTACGCCCCCAGGGTCTCCCTCATCGTCCACCCCTTCCCCCTCCCGTACCACACCAATTCATTCCTTGCCTGCCGTGCACTNTACATAGCTAACAAATTGAACTCATCATCGACCTATCCTTTGCTGGAGCTGTTCTTCAAGAGCCAGGGGTAAGTCTACNAATGCTGCACATNCTCACTATCGAGCACTTTGTATAGTGGCGAGATGTCAAAGGCTGGCAGCACGGGTNGTCNGGTAATTCGGTGTCTGAGTTCCAGTCAGGCTTCACCGATATTAGGACTGACCTNCAACGAGGGTTTCCTCANGTATGGTGCACAAAGGATACCCGTTCACCGTCTTCTTTGGACGGATCCTCAGCCTGTGGGGACCCTATGCACAGACATGTAACATCCGACCCTCTTGCAGATGGGAAATTAAATGTCCCTTTGAATTTAGACGTTGAACTGATATATTTGGAACTACATTCCTTTGCGCAAAATTGTCTTATAAAAAAAAAAAACCGGGGCGCGGCAATCCCTTGTAATTCCCCTTCTGCGTTACANGATGGACGTGACCATATAGTGTATCTTTCTCTTNTTTATGAGATNGTANACCCGCCCCAGATACATTGTGTGAATGTGTGGTGTGGNGTGGGTGCGCTAGTTCTTCCTCTCCTTTTCTATTTGTATATAATATATAGATTATATAAATATATANNNAGT]

[+] EMBL AW155143             [ACACGCTGCACCGCGCGCAGCCTCGAGCTCGAGGAGAGGGAGATTTGGCCCCCCGATGGCGAGGCCGAGGGCGCCGCTGCTGCGGCGGATGCTGCTGCTGTGCGCGGTGGCGGCCTCCTGCTCCTACTACCTCCTCGTCCTCCACGCGCAGGCCTCCGTGCCGCCGCGCTACGACGGGTTCGCCTACGGGGACGCCGCCACCGCCGCCTGGAAGGACACCATCCTCGTCGAGGCCTTCCTCGACCCGCTCTGCCCCGACAGCCGCGACGCCTGGGCGCCCCTCAGGCTCGCCGTCGACCGCTACGCCCCCAGGGTCTCCCTCATCGTCCACCCCTTCCCCCTCCCGTACCACACCAATTCATTCCTTGCCTGCCGTGCACTNTACATAGCTAACAAATTGAACTCATCATCGACCTATCCTTTGCTGGAGCTGTTCTTCAAGAGCCAGGGGTAAGTCTACNAATGCTGCACATNCTCACTATCGAGCACTTTGTATAGTGGCGAGATGTCAAAGGCTGGCAGCACGGGTNGTCNGGTAATTCGGTGTCTGAGTTCCAGTCAGGCTTCACCGATATTAGGACTGACCTNCAACGAGGGTTTCCTCANGTATGGTGCACAAAGGATACCCGTTCACCGTCTTCTTTGGACGGATCCTCAGCCTGTGGGGACCCTATGCACAGACATGTAACATCCGACCCTCTTGCAGATGGGAAATTAAATGTCCCTTTGAATTTAGACGTTGAACTGATATATTTGGAACTACATTCCTTTGCGCAAAATTGTCTTATAAAAAAAAAAAACCGGGGCGCGGCAATCCCTTGTAATTCCCCTTCTGCGTTACANGATGGACGTGACCATATAGTGTATCTTTCTCTTNTTTATGAGATNGTANACCCGCCCCAGATACATTGTGTGAATGTGTGGTGTGGNGTGGGTGCGCTAGTTCTTCCTCTCCTTTTCTATTTGTATATAATATATAGATTATATAAATATATANNNAGT]




>consensus_14287#0
ACACGCTGCACCGCGCGCAGCCTCGAGCTCGAGGAGAGGGAGATTTGGCCCCCCGATGGC
GAGGCCGAGGGCGCCGCTGCTGCGGCGGATGCTGCTGCTGTGCGCGGTGGCGGCCTCCTG
CTCCTACTACCTCCTCGTCCTCCACGCGCAGGCCTCCGTGCCGCCGCGCTACGACGGGTT
CGCCTACGGGGACGCCGCCACCGCCGCCTGGAAGGACACCATCCTCGTCGAGGCCTTCCT
CGACCCGCTCTGCCCCGACAGCCGCGACGCCTGGGCGCCCCTCAGGCTCGCCGTCGACCG
CTACGCCCCCAGGGTCTCCCTCATCGTCCACCCCTTCCCCCTCCCGTACCACACCAATTC
ATTCCTTGCCTGCCGTGCACTNTACATAGCTAACAAATTGAACTCATCATCGACCTATCC
TTTGCTGGAGCTGTTCTTCAAGAGCCAGGGGTAAGTCTACNAATGCTGCACATNCTCACT
ATCGAGCACTTTGTATAGTGGCGAGATGTCAAAGGCTGGCAGCACGGGTNGTCNGGTAAT
TCGGTGTCTGAGTTCCAGTCAGGCTTCACCGATATTAGGACTGACCTNCAACGAGGGTTT
CCTCANGTATGGTGCACAAAGGATACCCGTTCACCGTCTTCTTTGGACGGATCCTCAGCC
TGTGGGGACCCTATGCACAGACATGTAACATCCGACCCTCTTGCAGATGGGAAATTAAAT
GTCCCTTTGAATTTAGACGTTGAACTGATATATTTGGAACTACATTCCTTTGCGCAAAAT
TGTCTTATAAAAAAAAAAAACCGGGGCGCGGCAATCCCTTGTAATTCCCCTTCTGCGTTA
CANGATGGACGTGACCATATAGTGTATCTTTCTCTTNTTTATGAGATNGTANACCCGCCC
CAGATACATTGTGTGAATGTGTGGTGTGGNGTGGGTGCGCTAGTTCTTCCTCTCCTTTTC
TATTTGTATATAATATATAGATTATATAAATATATANNNAGT

consensusID : consensus_14287#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 929
fasta sequence

                              [TTCCTCCTCCGTCTCCCCACTTGCGGGAGAGAAGAGAAGGTTCAGAGTAGCACACGCTGCACCGCGCGCAGCCTCGAGCTCGAGGAGAGGGAGATTTGGCCCCCCGATGGCGAGGCCGAGGGCGCCGCTGCTGCGGCGG-ATGCTGCTGCTGTGCGCGGTGGCGGCCTCCTGCTCCTACTACCTCCTCGTCCTCCACGCGCAGGCCTCCGTGCCGCCGCGCTACGACGGGTTCGCCTACGGGGACGCCGCCACCGCCGCCTGGAAGGACACCATCCTCGTCGAGGCCTTCCTCGACCCGCTC-TGCCCCGACAGCCGCGACGCCTGGGCGCCCCTCAGGCTCGCCGTCGACCGCTACGCCCCCAGGGTCTCCCTCATCGTCCACCCCTTCCCCCTCCCGTACCACACCAATTCATTCCTTGCCTGCCGTGCACTTTACATAGCTAACAAATTGAACTCATCATCGACCTATCCTTTGCTGGAGCTGTTCTTCAAGAGCCAGGGTAAGTTCTACAATGCTGCAACATCCTCACTATCGAGCACTGTTATAAGTGGCGAGATGTCAAAGCTGGCAGCA-CGGGTTGTCGGTAATTCGGTGTCTGAGTTCCAGTCAGGCTTCAGCGATATAAGGACTGACCTAGCAGCGAGGGTTTCCTTCAAGTATGGGTGCACGAGAGGAGTAGCCGGTGCACCGTTCTTCTTTGTGAACGGATTCCTTCAGCCTGGTGGTGGATCGCCTATTGACTACAGCACATGGGTCAGCATCCTGGATCCCCTCGCTGGGCAGCATGGCGATAGATTAGAGATGTTCACCTCTATGTAAGTATTTGAAGCGTGTTGTAAACTTGTAATAATGATTTTGGGAATACTAACAGTTCGTCTATTTGATG-CAATAAATATTGATCTTAATTAAAAAAAAAAAAAAAAAAACC]

[+] EMBL AK064887             [TTCCTCCTCCGTCTCCCCACTTGCGGGAGAGAAGAGAAGGTTCAGAGTAGCACACGCTGCACCGCGCGCAGCCTCGAGCTCGAGGAGAGGGAGATTTGGCCCCCCGATGGCGAGGCCGAGGGCGCCGCTGCTGCGGCGG ATGCTGCTGCTGTGCGCGGTGGCGGCCTCCTGCTCCTACTACCTCCTCGTCCTCCACGCGCAGGCCTCCGTGCCGCCGCGCTACGACGGGTTCGCCTACGGGGACGCCGCCACCGCCGCCTGGAAGGACACCATCCTCGTCGAGGCCTTCCTCGACCCGCTC TGCCCCGACAGCCGCGACGCCTGGGCGCCCCTCAGGCTCGCCGTCGACCGCTACGCCCCCAGGGTCTCCCTCATCGTCCACCCCTTCCCCCTCCCGTACCACACCAATTCATTCCTTGCCTGCCGTGCACTTTACATAGCTAACAAATTGAACTCATCATCGACCTATCCTTTGCTGGAGCTGTTCTTCAAGAGCCAGGGTAAGTTCTACAATGCTGCAACATCCTCACTATCGAGCACTGTTATAAGTGGCGAGATGTCAAAGCTGGCAGCA CGGGTTGTCGGTAATTCGGTGTCTGAGTTCCAGTCAGGCTTCAGCGATATAAGGACTGACCTAGCAGCGAGGGTTTCCTTCAAGTATGGGTGCACGAGAGGAGTAGCCGGTGCACCGTTCTTCTTTGTGAACGGATTCCTTCAGCCTGGTGGTGGATCGCCTATTGACTACAGCACATGGGTCAGCATCCTGGATCCCCTCGCTGGGCAGCATGGCGATAGATTAGAGATGTTCACCTCTATGTAAGTATTTGAAGCGTGTTGTAAACTTGTAATAATGATTTTGGGAATACTAACAGTTCGTCTATTTGATG CAATAAATATT                               ]
[+] EMBL AU032424             [                           AGAGAAGAGAAGGTTCAGAGTAGCACACGCTGCACCGCGCGCA NCTCGAGCTCGAGGAGAGGGAGATTTGGCCCCCCGATGGCGAGGCCGAGGGCGCCGCTGCTGC GCGGNATGCTGCTGCTGTGCGCGGTGGCGGCCTCCTNCTCCTACTACCTCCTCGTCCTCCACGCGCAGGCCTCCGTGCCGCCGCGCTACGACGGGTTCGCCTACGGGGACGCCGCCACCGTCGNCTGGAAGGACACCATNCTCNTCGAGGCCTTCCTAGACCCGCTCTTGCCCCGACAGCCGCGACG CTTGNCGACCCTCAGGCTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK104804             [                                        TTCAGAGTAGCACACGCTGCACCGCGCGCAGCCTCGAGCTCGAGGAGAGGGAGATTTGGCCCCCCGATGGCGAGGCCGAGGGCGCCGCTGCTGCGGCGG ATGCTGCTGCTGTGCGCGGTGGCGGCCTCCTGCTCCTACTACCTCCTCGTCCTCCACGCGCAGGCCTCCGTGCCGCCGCGCTACGACGGGTTCGCCTACGGGGACGCCGCCACCGCCGCCTGGAAGGACACCATCCTCGTCGAGGCCTTCCTCGACCCGCTC TGCCCCGACAGCCGCGACGCCTGGGCGCCCCTCAGGCTCGCCGTCGACCGCTACGCCCCCAGGGTCTCCCTCATCGTCCACCCCTTCCCCCTCCCGTACCACACCAATTCATTCCTTGCCTGCCGTGCACTTTACATAGCTAACAAATTGAACTCATCATCGACCTATCCTTTGCTGGAGCTGTTCTTCAAGAGCCAGGGTAAGTTCTACAATGCTGCAACATCCTCACTATCGAGCACTGTTATAAGTGGCGAGATGTCAAAGCTGGCAGCA CGGGTTGTCGGTAATTCGGTGTCTGAGTTCCAGTCAGGCTTCAGCGATATAAGGACTGACCTAGCAGCGAGGGTTTCCTTCAAGTATGGGTGCACGAGAGGAGTAGCCGGTGCACCGTTCTTCTTTGTGAACGGATTCCTTCAGCCTGGTGGTGGATCGCCTATTGACTACAGCACATGGGTCAGCATCCTGGATCCCCTCGCTGGGCAGCATGGCGATAGATTAGAGATGTTCACCTCTATGTAAGTATTTGAAGCGTGTTGTAAACTTGTAATAATGATTTTGGGAATACTAACAGTTCGTC                                                    ]
[+] EMBL CF326716             [                                                     ACGCTGCACCGCGCGCAGCCTCGAGCTCGAGGAGAGGGAGATTTGGCCCCCCGATGGCGAGGCCGAGGGCGCCGCTGCTGCGGCGG ATGCTGCTGCTGTGCGCGGTGGCGGCCTCCTGCTCCTACTACCTCCTCGTCCTCCACGCGCAGGCCTCCGTGCCGCCGCGCTACGACGGGTTCGCCTACGGGGACGCCGCCACCGCCGCCTGGAAGGACACCATCCTCGTCGAGGCCTTCCTCGACCCGCTC TGCCCCGACAGCCGCGACGCCTGGGCGCCCCTCAGGCTCGCCGTCGACCGCTACGCCCCCAGGGTCTCCCTCATCGTCCACCCCTTCCCCCTCCCGTACCACACCAATTCATTCCTTGCCTGCCGTGCACTTTACATAGCTAACAAATTGAACTCATCATCGACCTATCCTTTGCTGGAGCTGTTCTTCAAGAGCCATGGTAAGTTCTACAATGCTGCAACATCCTCACTATCGAGCACTGTTATAAGTGGCGAGATGTCAAAGCTGGCAGC                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BF430615             [                                                         TGCACCGCGCGCAGCCTCGAGCTCGAGGAGAGGGAGATTTGGCCCCCCGATGGCCAGGCCGAGGGCGCCGCTGCTGCGGCGG ATGCTGCTGCTGTGCGCGGTGGCGGCCTCCTGCTCCTACTACCTCCTCGTCCTCCACGCGCAGGCCTCCGTGCCGCCGCGCTACGACGGGTTCGCCTACGGGGACGCCGCCACCGCCGCCTGGAAGGACACCATCCTCGTCGAGGCCTTCCTCGACCCGCTC TGCCCCGACAGCCGCGACGCCTGGGCGCCCCTCAGGCTCGCCGTCGACCGCTACGCCCCCAGGGTCTCCCTCATCGTCCACCCCTTCCCCCTCCCGTACCACACCAATTCATTCCTTGCCTGCCGTGCACTTTACATAGCTAACAAATTGAACTCATCATCGACCTATCCTTTGCTGGAGCTGTTCTTCAAGAGCCAGGGTAAGTTCTACAATGCTGCAACATCCTCACTATCGAGCACTGTTATAAGTGGCGAGATGTCAAAGCTGGCAGCA CGGGTTGTCGGTAATTCGGTGTCTGAGTTCCAGTCAGGCTTCAGCGATATAAGGACTGACCTAGCAGCGAGGGTTTCCTTCAAGTATGGGTGCACGAGAGGAGTAGCCGGTGCACCGTTCTTCTTTGTGAACGGATTCCTTCAGCCTGGT                                                                                                                                                                                                              ]
[+] EMBL CB654819             [                                                              CGCGCGCAGCCTCGAGCTCGAGGAGAGGGAGATTTGGCCCCCCGATGGCGAGGCCGAGGGCGCCGCTGCTGCGGCGG ATGCTGCTGCTGTGCGCGGTGGCGGCCTCCTGCTCCTACTACCTCCTCGTCCTCCACGCGCAGGCCTCCGTGCCGCCGCGCTACGACGGGTTCGCCTACGGGGACGCCGCCACCGCCGCCTGGAAGGACACCATCCTCGTCGAGGCCTTCCTCGACCCGCTC TGCCCCGACAGCCGCGACGCCTGGGCGCCCCTCAGGCTCGCCGTCGACCGCTACGCCCCCAGGGTCTCCCTCATCGTCCACCCCTTCCCCCTCCCGTACCACACCAATTCATTCCTTGCCTGCCGTGCACTTTACATAGCTAACAAATTGAACTCATCATCGACCTATCCTTTGCTGGAGCTGTTCTTCAAGAGCCAGGGTAAGTTCTACAATGCTGCAACATCCTCACTATCGAGCACTGTTATAAGTGGCGAGATGTCAAAGCTGGCAGCA CGGGTTGTCGGTAATTCGGTGTCTGAGTTCCAGTCAGGCTTCAGCGATATAAGGACTGACCTAGCAGCGAGGGTTTCCTTCAAGTATGGGTGCACGAGAGGAGTAGCCGGTGCACCGTTCTTCTTTGTGAACGGATTCCTTCAGCCTGGTGGTGGATCGCCTATTGACTACAGCACATGGGTCAGCATCCTGGATCCCCTCGCTGGGCAGCATGGCGATAGATTAGAGATGTTCACCTCTATGTAAGTATTTTGAGCGTGTTGTAAACTTGTAATAATGATTTTGGGAATACTAACAG                                                          ]
[+] EMBL AU173846             [                                                                                                                                                                                                               CCGTGCCGCCGCGCTACGACGGGTTCGCCTACGGGGACGCCGCCACCGCCGCCTGGAAGGACACCATCCTCGTCGAGGCCTTCCTCGACCCGCTC TGCCCCGACAGCCGCGACGCCTGGGCGCCCCTCAGGCTCGCCGTCGACCGCTACGCCCCCAGGGTCTCCCTCATCGTCCACCCCTTCCCCCTCCCGTACCACACCAATTCATTCCTTGCCTGCCGTGCACTTTACATAGCTAACAAATTGAACTCATCATCGACCTATCCTTTGCTGGAGCTGTTCTTCAAGAGCCAGGGTAAGTTCTACAATGCTGCAACATCCTCACTATCGAGCACTGTTATAAGTGGCGAGATGTCAAAGCTGGCAGCA CGGGTTGTCGGTAATTCGGTGTCTGAGTTCCAGTCAGGCTTCAGCGATATAAGGACTGACCTAGCAGCGAGGG                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB654820             [                                                                                                                                                                                                                  TGCCGCCGCGCTACGACGGGTTCGCCTACGGGGACGCCGCCACCGCCGCCTGGAAGGACACCATCCTCGTNGAGGCCTTCCTCGACCCGCTC TGCCCCGACAGCCGCGACGCCTGGGCGCCCCTCAGGCTCGCCGTCGACCGCTACGCCCCCAGGGTCTCCCTCATCGTCCACCCCTTCCCCCTCCCGTACCACACCAATTCATTCCTTGCCTGCCGTGCACTTTACATAGCTAACAAATTGAACTCATCATCGACCTATCCTTTGCTGGAGCTGTTCTTCAAGAGCCAGGGTAAGTTCTACAATGCTGCAACATCCTCACTATCGAGCACTGTTATAAGTGGCGAGATGTCAAAGCTGGCAGCA CGGGTTGTCGGTAATTCGGTGTCTGAGTTCCAGTCAGGCTTCAGCGATATAAGGACTGACCTAGCAGCGAGGGTTTCCTTCAAGTATGGGTGCACGAGAGGAGTAGCCGGTGCACCGTTCTTCTTTGTGAACGGATTCCTTCAGCCTGGTGGTGGATCGCCTATTGACTACAGCACATGGGTCAGCATCCTGGATCCCCTCGCTGGGCAGCATGGCGATAGATTAGAGATGTTCACCTCTATGTAAGTATTTGAAGCGTGTTGTAAACTTGTAATAATGATTTTGGGAATACTAACAGTTCGTTTAATGGATG CAATAAATATTGATCTT                         ]
[+] EMBL CF196784             [                                                                                                                                                                                                                                                                                                                                                                                   CCTCATCGTCCACCCCTTCCCCCTCCCGTACCACACCAATTCATTCCTTGCCTGCCGTGCACTTTACATAGCTAACAAATTGAACTCATCATCGACCTATCCTTTGCTGGAGCTGTTCTTCAAGAGCCAGGGTAAGTTCTACAATGCTGCAACATCCTCACTATCGAGCACTGTTATAAGTGGCGAGATGTCAAAGCTGGCAGCA CGGGTTGTCGGTAATTCGGTGTCTGAGTTCCAGTCAGGCTTCAGCGATATAAGGACTGACCTAGCAGCGAGGGTTTCCTTCAAGTATGGGTGCACGAGNNNAGTAGCCGGTGCACCGTTCTTCTTNGTGAANNNANTCCTTCNNNNTNGNNNNNGATCNNNNNNNNACTACAGCACATGGGg                                                                                                                                                                              ]
[+] EMBL BF430870             [                                                                                                                                                                                                                                                                                                                                                                                                    TCCCCCTCCCGTACCACACCAATTCATTCCTTGCCTGCCGTGCACTTTACATAGCTAACAAATTGAACTCATCATCGACCTATCCTTTGCTGGAGCTGTTCTTCAAGAGCCAGGGTAAGTTCTACAATGCTGCAACATCCTCACTATCGAGCACTGTTATAAGTGGCGAGATGTCAAAGCTGGCAGCA CGGGTTGTCGGTAATTCGGTGTCTGAGTTCCAGTCAGGCTTCAGCGATATAAGGACTGACCTAGCAGCGAGGGTTTCCTTCAAGTATGGGTGCACGAGAGGAGTAGCCGGTGCACCGTTCTTCTTTGTGAACGGATTCCTTCAGCCTGGTGGTGGATCGCCTATTGACTACAGCACATGGGTCAGCATCCTGGATCCCCTCGCTGGGCAGCACGGCGATAAATTAGAGATGTTCACCTCTATGTAAGTATTTGAAGCGTGTTGTAAACTTGTAATAATGATTTTGGGAATACTAACAGTTCGTCTAT                                                 ]
[+] EMBL BI810043             [                                                                                                                                                                                                                                                                                                                                                                                                                                                       TAGCTAACCAATTGAACTCATCATCGACCTATCCTTTGCTGGAGCTGTTCTTCAAGAGCCAGGGTAAGTTCTACAATGCTGCAACATCCTCACTATCGAGCACTGTTATAAGTGGCGAGATGTCAAAGCTGGCAGCACCGGGTTGTCGGTAATTCGGTGTCTGAGTTCCAGTCAGGCTTCAGCGATATAAGGACTGACCTAGCAGCGAGGGTTTCCTTCAAGTATGGGTGCACGAGAGGAGTAGCCGGTGCACCGTTCTTCTTTGTGAACGGATTCCTTCAGCCTGGTGGTGGATCGCCTATTGACTACAGCACATGGGTCAGCATCCTGGATCCCCTCGCTGGGCAGCATGGCGATAGATTAGAGATGTTCACCTCTATGTAAGTATTTGAAGCGTGTTGTAAACTTGTAATAATGATTTTGGGAATACTAACAGTTCGTCTATTTGATGCCAATAAATATTGATCTTAATTAAAAAAAAAA           ]
[+] EMBL AU070812             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GCNGCA CGGGTTGTCGGTAATTCGGTGTCTGAGTTCCAGTCAGGCTTCAGCGATATAAGGACTGACCTNGCAGCGAGGGTTTCCTTCAAGTATGGGTGCACGAGAGGAGTAGCCGGTGCACCGTTCTTCTTTGTGAACGGATTCCTTCAGCCTGGTGGTGGATCGCCTATTGACTACAGCACATGGGTCAGCATCCTGGATCCCCTCGCTGGGCAGCATGGCGATAGATTAGAGATGTTCACCTCTATGTAAGTATTTGAAGCGTGTTGTAAACTTGTAATAATGATTTTGGGAATACTAACAGTTCGTCTATTTGATG CAATAAATATTGATCTTAATTATAAAAAAAAAAA        ]
[-] EMBL CF304717             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCAAGTATGGGTGCACCAGAGGAGTAGCCGGTGCACCGTTCTTCTTTGTGAACGGATTCCTTCAGCCTGGTGGTGGATCGCCTATTGACTACAGCACATGGGTCAGCATCCTGGATCCCCTCGCTGGGCAGCATGGCGATAGATTAGAGATGTTCACCTCTATGTAAGTATTTGAAGCGTGTTGTAAACTTGTAATAATGATTTTGGGAATACTAACAGTTCGTCTATTTGATG CAATAAATATTGATCTTAATTAAAAAAAAAAAAAAAAAAACC]
[+] EMBL AU095559             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AGTAGCCGGTGCNCCGTTCTTCTTTGTGAACGGATTCCTNCAGCCTGNTGGTGGATCGCCTATTGACTACAGCACATGGGTCAGCATCCTGGATCCCCTCGCTGGGCAGCATGGCGATAGATTAGAGATGTTCACCTCTATGTAAGTATTTGAAGCGTGTTGTAAACTTGTAATAATGATTTTGGGAATACTAACAGTTCGTCTATTTGATG CAATAAATATTGATCTTAATTATAAAAAA             ]




>consensus_14287#1
TTCCTCCTCCGTCTCCCCACTTGCGGGAGAGAAGAGAAGGTTCAGAGTAGCACACGCTGC
ACCGCGCGCAGCCTCGAGCTCGAGGAGAGGGAGATTTGGCCCCCCGATGGCGAGGCCGAG
GGCGCCGCTGCTGCGGCGGATGCTGCTGCTGTGCGCGGTGGCGGCCTCCTGCTCCTACTA
CCTCCTCGTCCTCCACGCGCAGGCCTCCGTGCCGCCGCGCTACGACGGGTTCGCCTACGG
GGACGCCGCCACCGCCGCCTGGAAGGACACCATCCTCGTCGAGGCCTTCCTCGACCCGCT
CTGCCCCGACAGCCGCGACGCCTGGGCGCCCCTCAGGCTCGCCGTCGACCGCTACGCCCC
CAGGGTCTCCCTCATCGTCCACCCCTTCCCCCTCCCGTACCACACCAATTCATTCCTTGC
CTGCCGTGCACTTTACATAGCTAACAAATTGAACTCATCATCGACCTATCCTTTGCTGGA
GCTGTTCTTCAAGAGCCAGGGTAAGTTCTACAATGCTGCAACATCCTCACTATCGAGCAC
TGTTATAAGTGGCGAGATGTCAAAGCTGGCAGCACGGGTTGTCGGTAATTCGGTGTCTGA
GTTCCAGTCAGGCTTCAGCGATATAAGGACTGACCTAGCAGCGAGGGTTTCCTTCAAGTA
TGGGTGCACGAGAGGAGTAGCCGGTGCACCGTTCTTCTTTGTGAACGGATTCCTTCAGCC
TGGTGGTGGATCGCCTATTGACTACAGCACATGGGTCAGCATCCTGGATCCCCTCGCTGG
GCAGCATGGCGATAGATTAGAGATGTTCACCTCTATGTAAGTATTTGAAGCGTGTTGTAA
ACTTGTAATAATGATTTTGGGAATACTAACAGTTCGTCTATTTGATGCAATAAATATTGA
TCTTAATTAAAAAAAAAAAAAAAAAAACC

consensusID : consensus_14287#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 286
fasta sequence

                              [GTGCNCCGCGCGCNGCTCNAGCTCGAGGNGNGGGNGNTTTGGCCCCCCGATGGCGNNGCCGANGGCGCCGCTGCTGCGGCGGNTGCTGCTGCTGTGCGCGGTGGCGGCCTCCTGCTCCTACTNCCTCCTCGTCCTCCACGCGCNGGCCTCCGTGCCGCCGCGCTNCGNCGGGTTCGCCTNCGGGGNCGCCGCCNCCGCCGCCTGGNNGGNCNCCATCCTCGTCGNGGCCTTCCTCGACCCGCTCTGCCCCGACAGCCGCGACGCCTGGGCGCCCCTCNGGCTCGCC]

[+] EMBL BE228323             [GTGCNCCGCGCGCNGCTCNAGCTCGAGGNGNGGGNGNTTTGGCCCCCCGATGGCGNNGCCGANGGCGCCGCTGCTGCGGCGGNTGCTGCTGCTGTGCGCGGTGGCGGCCTCCTGCTCCTACTNCCTCCTCGTCCTCCACGCGCNGGCCTCCGTGCCGCCGCGCTNCGNCGGGTTCGCCTNCGGGGNCGCCGCCNCCGCCGCCTGGNNGGNCNCCATCCTCGTCGNGGCCTTCCTCGACCCGCTCTGCCCCGACAGCCGCGACGCCTGGGCGCCCCTCNGGCTCGCC]




>consensus_14287#2
GTGCNCCGCGCGCNGCTCNAGCTCGAGGNGNGGGNGNTTTGGCCCCCCGATGGCGNNGCC
GANGGCGCCGCTGCTGCGGCGGNTGCTGCTGCTGTGCGCGGTGGCGGCCTCCTGCTCCTA
CTNCCTCCTCGTCCTCCACGCGCNGGCCTCCGTGCCGCCGCGCTNCGNCGGGTTCGCCTN
CGGGGNCGCCGCCNCCGCCGCCTGGNNGGNCNCCATCCTCGTCGNGGCCTTCCTCGACCC
GCTCTGCCCCGACAGCCGCGACGCCTGGGCGCCCCTCNGGCTCGCC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14287#1      TTCCTCCTCCGTCTCCCCACTTGCGGGAGAGAAGAGAAGGTTCAGAGTAGCACACGCTGC 60
consensus_14287#2      --------------------------------------------------------GTGC 4
consensus_14287#0      ---------------------------------------------------ACACGCTGC 9
                                                                                ***

consensus_14287#1      ACCGCGCGCAGCCTCGAGCTCGAGGAGAGGGAGATTTGGCCCCCCGATGGCGAGGCCGAG 120
consensus_14287#2      NCCGCGCGCNGC-TCNAGCTCGAGGNGNGGGNGNTTTGGCCCCCCGATGGCGNNGCCGAN 63
consensus_14287#0      ACCGCGCGCAGCCTCGAGCTCGAGGAGAGGGAGATTTGGCCCCCCGATGGCGAGGCCGAG 69
                        ******** ** ** ********* * *** * ******************  ***** 

consensus_14287#1      GGCGCCGCTGCTGCGGCGGATGCTGCTGCTGTGCGCGGTGGCGGCCTCCTGCTCCTACTA 180
consensus_14287#2      GGCGCCGCTGCTGCGGCGGNTGCTGCTGCTGTGCGCGGTGGCGGCCTCCTGCTCCTACTN 123
consensus_14287#0      GGCGCCGCTGCTGCGGCGGATGCTGCTGCTGTGCGCGGTGGCGGCCTCCTGCTCCTACTA 129
                       ******************* *************************************** 

consensus_14287#1      CCTCCTCGTCCTCCACGCGCAGGCCTCCGTGCCGCCGCGCTACGACGGGTTCGCCTACGG 240
consensus_14287#2      CCTCCTCGTCCTCCACGCGCNGGCCTCCGTGCCGCCGCGCTNCGNCGGGTTCGCCTNCGG 183
consensus_14287#0      CCTCCTCGTCCTCCACGCGCAGGCCTCCGTGCCGCCGCGCTACGACGGGTTCGCCTACGG 189
                       ******************** ******************** ** *********** ***

consensus_14287#1      GGACGCCGCCACCGCCGCCTGGAAGGACACCATCCTCGTCGAGGCCTTCCTCGACCCGCT 300
consensus_14287#2      GGNCGCCGCCNCCGCCGCCTGGNNGGNCNCCATCCTCGTCGNGGCCTTCCTCGACCCGCT 243
consensus_14287#0      GGACGCCGCCACCGCCGCCTGGAAGGACACCATCCTCGTCGAGGCCTTCCTCGACCCGCT 249
                       ** ******* ***********  ** * ************ ******************

consensus_14287#1      CTGCCCCGACAGCCGCGACGCCTGGGCGCCCCTCAGGCTCGCCGTCGACCGCTACGCCCC 360
consensus_14287#2      CTGCCCCGACAGCCGCGACGCCTGGGCGCCCCTCNGGCTCGCC----------------- 286
consensus_14287#0      CTGCCCCGACAGCCGCGACGCCTGGGCGCCCCTCAGGCTCGCCGTCGACCGCTACGCCCC 309
                       ********************************** ********                 

consensus_14287#1      CAGGGTCTCCCTCATCGTCCACCCCTTCCCCCTCCCGTACCACACCAATTCATTCCTTGC 420
consensus_14287#2      ------------------------------------------------------------
consensus_14287#0      CAGGGTCTCCCTCATCGTCCACCCCTTCCCCCTCCCGTACCACACCAATTCATTCCTTGC 369
                                                                                   

consensus_14287#1      CTGCCGTGCACTTTACATAGCTAACAAATTGAACTCATCATCGACCTATCCTTTGCTGGA 480
consensus_14287#2      ------------------------------------------------------------
consensus_14287#0      CTGCCGTGCACTNTACATAGCTAACAAATTGAACTCATCATCGACCTATCCTTTGCTGGA 429
                                                                                   

consensus_14287#1      GCTGTTCTTCAAGAGCCAGGG-TAAGTTCTACAATGCTGCAACATCCTCACTATCGAGCA 539
consensus_14287#2      ------------------------------------------------------------
consensus_14287#0      GCTGTTCTTCAAGAGCCAGGGGTAAGTCTACNAATGCTGCA-CATNCTCACTATCGAGCA 488
                                                                                   

consensus_14287#1      CTGTTATAAGTGGCGAGATGTCAAAG-CTGGCAGCACGGGTTGTCGG-TAATTCGGTGTC 597
consensus_14287#2      ------------------------------------------------------------
consensus_14287#0      CTTTGTATAGTGGCGAGATGTCAAAGGCTGGCAGCACGGGTNGTCNGGTAATTCGGTGTC 548
                                                                                   

consensus_14287#1      TGAGTTCCAGTCAGGCTTCAGCGATATAAGGACTGACCTAGCAGCGAGGGTTTCCTTCAA 657
consensus_14287#2      ------------------------------------------------------------
consensus_14287#0      TGAGTTCCAGTCAGGCTTCACCGATATTAGGACTGACCTN-CAACGAGGGTTTCCT-CAN 606
                                                                                   

consensus_14287#1      GTATGGGTGCACGAGAGGAGTAGCCGGTGCACCGTTCTTCTTTGTGAACGGATTCCTTCA 717
consensus_14287#2      ------------------------------------------------------------
consensus_14287#0      GTATGG-TGCACAAAGGATA---CCCGTTCACCGT-CTTCTTTG--GACGGAT--CCTCA 657
                                                                                   

consensus_14287#1      GCCTGGTGGTGGATCGCCTATTGAC-TACAGCACATGGGTCA---GCATCCTGGA----- 768
consensus_14287#2      ------------------------------------------------------------
consensus_14287#0      GCCTGTGGGGACCCTATGCACAGACATGTAACATCCGACCCTCTTGCAGATGGGAAATTA 717
                                                                                   

consensus_14287#1      ----TCCCCTCG---CTGGGCAGCATGGCGATAGATTAGAGA-TGTTCACCTCTATGTAA 820
consensus_14287#2      ------------------------------------------------------------
consensus_14287#0      AATGTCCCTTTGAATTTAGACGTTGAACTGATATATTTGGAACTACATTCCTTTGCGCAA 777
                                                                                   

consensus_14287#1      G--TATTTGAAGCGTGTTGTAAACTTGTA-ATAATGATTT-TGGGAATACTAACAGTTCG 876
consensus_14287#2      ------------------------------------------------------------
consensus_14287#0      AATTGTCTTATAAAAAAAAAAAACCGGGGCGCGGCAATCCCTTGTAATTCCCCTTCTGCG 837
                                                                                   

consensus_14287#1      TC---TATTTGATGCAATAA-ATATTG-ATCTTAATTAAAAAAAAAAAAAAAAAAACC-- 929
consensus_14287#2      ------------------------------------------------------------
consensus_14287#0      TTACANGATGGACGTGACCATATAGTGTATCTTTCTCTTNTTTATGAGATNGTANACCCG 897
                                                                                   

consensus_14287#1      ------------------------------------------------------------
consensus_14287#2      ------------------------------------------------------------
consensus_14287#0      CCCCAGATACATTGTGTGAATGTGTGGTGTGGNGTGGGTGCGCTAGTTCTTCCTCTCCTT 957
                                                                                   

consensus_14287#1      ---------------------------------------------
consensus_14287#2      ---------------------------------------------
consensus_14287#0      TTCTATTTGTATATAATATATAGATTATATAAATATATANNNAGT 1002