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Oryza sativa
cluster # 14308 cluster # 14308       Sequences # 16       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14308#0 length = 1530 sequences # 14  
consensus_14308#1 length = 687 sequences # 1  
consensus_14308#2 length = 236 sequences # 1  

consensusID : consensus_14308#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 1530
fasta sequence
                              [GCTCTCCGTTCAAACCGTCCCGCGCCGCCGCGGCCGCTGCAACCCGCGCGCGCGGACTCCTGCCTCTCGGTCGAAGGAGATGGCTGAGGTTGACACCTTCCTCTTCACTTCCGAGTCCGTCAATGAGGGACACCCTGACAAGCTCTGCGACCAGATATCCGATGCGGTGCTTGATGCGTGCCTTGCTGAAGACCCTGAAAGCAAGGTTGCCTGTGAGACCTGCACCAAGACCAACATGGTCATGGTGTTTGGTGAGATCACTACCAAGGCCAATGTTGACTATGAGAAGATCGTCAGGGATACTTGCCGCGGCATCGGCTTTGTGTCCAATGATGTAGGCCTTGATGCTGAACACTGTAAGGTGCTTGTCAACATTGAGCAGCAATCCCCTGACATCGCACAGGGTGTCCATGGGCACTTCACCAAGCGCCCAGAGGAGATTGGTGCCGGTGACCAGGGGCATATGTTTGGATATGCAACCGATGAGACCCCTGAATTGATGCCACTCAGCCATGTTCTTGCTACCAAGCTCGGTGCCCGTCTCACCGAGGTCCGCAAGAACGGGGCATGCGCATGGCTGAGGCCTGATGGGAAGACGCAAGTGACAGTGGAGTACCAGAACGACAATGGCGCCATGGTCCCTCTCCGCGTCCACACCGTGCTCATCTCCACCCAGCACGATGAGACCGTGACCAACGACGAAATCGCGGCTGACCTGAAGGAGCATGTCATCAAGCCTGTCATCCCAGAGCAGTACCTTGATGAGAAGACCATCTTCCATCTCAACCCGTCAGGTCGCTTCGTCATCGGTGGACCTCATGGAGATGCAGGTCTCACCGGGCGCAAGATCATCATCGACACCTACGGTGGCTGGGGAGCACACGGTGGT-GGCGCGTTCTCCGGCAAGGACCCGACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCAAGAGCATCGTTGCCAATGG-CCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCA-TTGGCGTGCCGGAACC-GCTCTCGGTGTTCGTCGACACTTACGGCACGGG-CAAGATCCCTGACAGGGAGA-TCCTCAGGATTGTCAC-GGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCAACCTCGACCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGCGGCTTACGGGCACTTCGGGAGGGAGGACCCTGACTTCACCTGGGAGGTGGTGAAACCCCTCAAGTGGGAGGAGCCTTCTGCATAAACAAACACTTGCAGCCTCTAAAACTGTTTTGGAAATGTTTCCATTGATTTTGGAGATGTTTTTATCTACACTTCAGCCTCTGAACTTAATCAGACCGTCACTACATGTATCTATTTTCACTGCCTTAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGAGTGGTGAGGGGATGATGAAACTATAAAGAA-ACTGAAGCCTCTCATTGGTCCTAAAAAAAAAAAAGGA]

[+] EMBL CB618195             [GCTCTCCGTTCAAACCGTCCCGCGCCGCCGCGGCCGCTGCAACCCGCGCGCGCGGACTCCTGCCTCTCGGTCGAAGGAGATGGCTGAGGTTGACACCTTCCTCTTCACTTCCGAGTCCGTCAATGAGGGACACCCTGACAAGCTCTGCGACCAGATATCCGATGCGGTGCTTGATGCGTGCCTTGCTGAAGACCCTGAAAGCAAGGTTGCCTGTGAGACCTGCACCAAGACCAACATGGTCATGGTGTTTGGTGAGATCACTACCAAGGCCAATGTTGACTATGAGAAGATCGTCAGGGATACTTGCCGCGGCATCGGCTTTGTGTCCAATGATGTAGGCCTTGATGCTGAACACTGTAAGGTGCTTGTCAACATTGAGCAGCAATCCCCTGACATCGCACAGGGTGTCCATGGGCACTTCACCAAGCGCCCAGAGGAGATTGGTGCCGGTGACCAGGGGCATATGTTTGGATATGCAACCGATGAGACCCCTGAATTGATGCCACTCAGCCATGTTCTTGCTACCAAGCTCGGTGCCCGTCTCACCGAGGTCCGCAAGAACGGGGCATGCGCATGGCTGAGGCCTGATGGGAAGACGCAAGTGACAGTGGAGTACCAGAACGACAATGGCGCCATGGTCCCTCTCCGCGTCCACACCGTGCTCATCTCCACCCAGCACGATGAGACCGTGACCAACGACGAAATCGCGGCTGACCTGAAGGAGCATGTCATCAAGCCTGTCATCCCAGAGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB618233             [GCTCTCCGTTTAAACCGTCCCGCGCCGCCGCGGCCGCTGCAACCCGCGCGCGCGGACTCCTGCCTCTCGGTCGAAGGAGATGGCTGAGGTTGACACCTTCCTCTTCACTTCCGAGTCCGTCAATGAGGGACACCCTGACAAGCTCTGCGACCAGATATCCGATGCGGTGCTTGATGCGTGCCTTGCTGAAGACCCTGAAAGCAAGGTTGCCTGTGAGACCTGCACCAAGACCAACATGGTCATGGTGTTTGGTGAGATCACTACCAAGGCCAATGTTGACTATGAGAAGATCGTCAGGGATACTTGCCGCGGCATCGGCTTTGTGTCCAATGATGTAGGCCTTGATGCTGAACACTGTAAGGTGCTTGTCAACATTGAGCAGCAATCCCCTGACATCGCACAGGGTGTCCATGGGCACTTCACCAAGCGCCCAGAGGAGATTGGTGCCGGTGACCAGGGGCATATGTTTGGATATGCAACCGATGAGACCCCTGAATTGATGCCACTCAGCCATGTTCTTGCTACCAAGCTCGGTGCCCGTCTCACCGAGGTCCGCAAGAACGGGGCATGCGCATGGCTGAGGCCTGATGGGAAGACGCAAGTGACAGTGGAGTACCAGAACGACAATGGCGCCATGGTCCCTCTCCGCGTCCACACCGTGCTCATCTCCACCCAGCACGATGAGACCGTGACCCACGACGAAATCGCGGCTGACCTGAAGGAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB618165             [GCTCTCCGTTCAAACCGTCCCGCGCCGCCGCGGCCGCTGCAACCCGCGCGCGCGGACTCCTGCCTCTCGGTCGAAGGAGATGGCTGAGGTTGACACCTTCCTCTTCACTTCCGAGTCCGTCAATGAGGGACACCCTGACAAGCTCTGCGACCAGATATCCGATGCGGTGCTTGATGCGTGCCTTGCTGAAGACCCTGAAAGCAAGGTTGCCTGTGAGACCTGCACCAAGACCAACATGGTCATGGTGTTTGGTGAGATCACTACCAAGGCCAATGTTGACTATGAGAAGATCGTCAGGGATACTTGCCGCGGCATCGGCTTTGTGTCCAATGATGTAGGCCTTGATGCTGAACACTGTAAGGTGCTTGTCAACATTGAGCAGCAATCCCCTGACATCGCACAGGGTGTCCATGGGCACTTCACCAAGCGCCCAGAGGAGATTGGTGCCGGTGACCAGGGGCATATGTTTGGATATGCAACCGATGAGACCCCTGAATTGATGCCACTCAGCCATGTTCTTGCTACCAAGCTCGGTGCCCGTCTCACCGAGGTCCGCAAGAACGGGGCATGCGCATGGCTGAGGCCTGATGGGAAGACGCAAGTGACAGTGGAGTACCAGAACGACAATGGCGCCATGGTCCCTCTCCGCGTCCACACCGTGCTCATCTCCACCCAGCACGATGAGACCGTGACCAACGACGAAATCGCGGCTGACCTGAAGGAGCATGTCATCAAGCCTGTCATCCCAGAGCAGTACCTTGATGAGAAGACCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB618128             [GCTCTCCGTTCAAACCGTCCCGCGCCGCCGCGGCCGCTGCAACCCGCGCGCGCGGACTCCTGCCTCTCGGTCGAAGGAGATGGCTGAGGTTGACACCTTCCTCTTCACTTCCGAGTCCGTCAATGAGGGACACCCTGACAAGCTCTGCGACCAGATATCCGATGCGGTGCTTGATGCGTGCCTTGCTGAAGACCCTGAAAGCAAGGTTGCCTGTGAGACCTGCACCAAGACCAACATGGTCATGGTGTTTGGTGAGATCACTACCAAGGCCAATGTTGACTATGAGAAGATCGTCAGGGATACTTGCCGCGGCATCGGCTTTGTGTCCAATGATGTAGGCCTTGATGCTGAACACTGTAAGGTGCTTGTCAACATTGAGCAGCAATCCCCTGACATCGCACAGGGTGTCCATGGGCACTTCACCAAGCGCCCAGAGGAGATTGGTGCCGGTGACCAGGGGCATATGTTTGGATATGCAACCGATGAGACCCCTGAATTGATGCCACTCAGCCATGTTCTTGCTACCAAGCTCGGTGCCCGTCTCACCGAGGTCCGCAAGAACGGGGCATGCGCATGGCTGAGGCCTGATGGGAAGACGCAAGTGACAGTGGAGTACCAGAACGACAATGGCGCCATGGTCCCTCTCCGCGTCCACACCGTGCTCATCTCCACCCAGCACGATGAGACCGTGACCAACGACGAAATCGCGGCTGACCTGAAGGAGCATGTCATCAAGCCTGTCATCCCAGAGCAGTACCTTGATGAGAAGACCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB618193             [GCTCTCCCTT AAACCGTCCCGCGCCGCCGCGGCCGCTGCAACCCGCGCGCGCGGACTCCTGCCTCTCGGTCGAAGGAGATGGCTGAGGTTGACACCTTCCTCTTCACTTCCGAGTCCGTCAATGAGGGACACCCTGACAAGCTCTGCGACCAGATATCCGATGCGGTGCTTGATGCGTGCCTTGCTGAAGACCCTGAAAGCAAGGTTGCCTGTGAGACCTGCACCAAGACCAACATGGTCATGGTGTTTGGTGAGATCACTACCAAGGCCAATGTTGACTATGAGAAGATCGTCAGGGATACTTGCCGCGGCATCGGCTTTGTGTCCAATGATGTAGGCCTTGATGCTGAACACTGTAAGGTGCTTGTCAACATTGAGCAGCAATCCCCTGACATCGCACAGGGTGTCCATGGGCACTTCACCAAGCGCCCAGAGGAGATTGGTGCCGGTGACCAGGGGCATATGTTTGGATATGCAACCGATGAGACCCCTGAATTGATGCCACTCAGCCATGTTCTTGCTACCAAGCTCGGTGCCCGTCTCACCGAGGTCCGCAAGAACGGGGCATGCGCATGGCTGAGGCCTGATGGGAAGACGCAAGTGACAGTGGAGTACCAGAACGACAATGGCGCCATGGTCCCTCTCCGCGTCCACACCGTGCTCATCTCCACCCAGCACGATGAGACCGTGACCAACGACGAAATCGCGGCTGACCTGAAGGAGCATGTCATCAAGCCTGTCATCCCAGAGCAGTACCTTGATGAGAAGACCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB618125             [GCTCTCCCTT AAAGCGTCCCGCGCCGCCGCGGCCGCTGCAACCCGCGCGCGCGGACTCCTGCCTCTCGGTCGAAGGAGATGGCTGAGGTTGACACCTTCCTCTTCACTTCCGAGTCCGTCAATGAGGGACACCCTGACAAGCTCTGCGACCAGATATCCGATGCGGTGCTTGATGCGTGCCTTGCTGAAGACCCTGAAAGCAAGGTTGCCTGTGAGACCTGCACCAAGACCAACATGGTCATGGTGTTTGGTGAGATCACTACCAAGGCCAATGTTGACTATGAGAAGATCGTCAGGGATACTTGCCGCGGCATCGGCTTTGTGTCCAATGATGTAGGCCTTGATGCTGAACACTGTAAGGTGCTTGTCAACATTGAGCAGCAATCCCCTGACATCGCACAGGGTGTCCATGGGCACTTCACCAAGCGCCCAGAGGAGATTGGTGCCGGTGACCAGGGGCATATGTTTGGATATGCAACCGATGAGACCCCTGAATTGATGCCACTCAGCCATGTTCTTGCTACCAAGCTCGGTGCCCGTCTCACCGAGGTCCGCAAGAACGGGGCATGCGCATGGCTGAGGCCTGATGGGAAGACGCAAGTGACAGTGGAGTACCAGAACGACAATGGCGCCATGGTCCCTCTCCGCGTCCACACCGTGCTCATCTCCACCCAGCACGATGAGACCGTGACCAACGACGAAATCGCGGCTGACCTGAAGGAGCATGTCATCAAGCCTGTCATCCCAGAGCAGTACCTTGATGAGAAGACCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CA765675             [                                                                                                                                                                                                                                                                                                                             GCTTTGTGTCCAATGATGTAGGCCTTGATGCTGAACACTGTAAGGTTCTTGTCAACATTGAGCAGCAATCCCCTGACATCGCACAGGGTGTCCATGGGCACTTCACCAAGCGCCCAGAGGAGATTGGTGCCGGTGACCAGGGGCATATGTTTGGATATGCAACCGATGAGACCCCTGAATTGATGCCACTCAGCCATGTTCTTGCTACCAAGCTCGGTGCCCGTCTCACCGAGGTCCGCAAGAACGGGGCATGCGCATGGCTGAGGCCTGATGGGAAGACGCAAGTGACAGTGGAGTACCAGAACGACAATGGCGCCATGGTCCCTCTCCGCGTCCACACCGTGCTCATCTCCACCCAGCACGATGAGACCGTGACCAACGACGAAATCGCGGCTGACCTGAAGGAGCATGTCATCAAGCCTGTCATCCCAGAGCAGTACCTTGATGAGAAGACCATCTTCCATCTCAACCCGTCAGGTCGCTTCGTCATCGGTGGACCTCATGGAGATGCAGGTCTCACCGGGCGCAAGATCATCATCGACACCTACGGTGGCTGGGGAGCACACGGTGGTGGGCGCGTTCTCCGGCAAGGACCCGACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCAAGAGCATCGTTGCCAATGGCCCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTACGCCATTTGGCGTGCCGGAACCGGTTTTNGGGGTTCGTCGACACTTACNGCACGGGCCAAGATCCCTG CAGGGAAANNCCTCAGGATTGTCACNGGANAACTTCGATTTCAGGNCAGGCATGATCA                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB618166             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TCATCAAGCCTGTCATCCCAGAGCAGTACCTTGATGAGAAGACCATCTTCCATCTCAACCCGTCAGGTCGCTTCGTCATCGGTGGACCTCATGGAGATGCAGGTCTCACCGGGCGCAAGATCATCATCGACACCTACGGTGGCTGGGGAGCACACGGTGGT GGCGCGTTCTCCGGCAAGGACCCGACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCAAGAGCATCGTTGCCAATGG CCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCA TTGGCGTGCCGGAACC GCTCTCGGTGTTCGTCGACACTTACGGCACGGG CAAGATCCCTGACAGGGAGA TCCTCAGGATTGTCAC GGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCAACCTCGACCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGCGGCTTACGGGCACTTCGGGAGGGAGGACCCTGACTTCACCTGGGAGGTGGTGAAACCCCTCAAGTGGGAGGAGCCTTCTGCATAAACAAACACTTGCAGCCTCTAAAACTGTTTTGGAAATGTTTCCATTGATTTTGGAGATGTTTTTATCTACACTTCAGCCTCTGAACTTAATCAGACCGTCACTACATGTATCTATTTTCACTGCCTTAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGAGTGGTGAGGGGATGATGAAACTATAAAGAA ACTGAAGCCTCTC                        ]
[-] EMBL CB625973             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTACCTTGATGAGAAGACCATTTTCCATCTCAACCCGTCAGGTCGCTTGGTCATCGGTGGACCTCATGGAGATGCAGGTTTCACCGGGCGCAAGATCATCATCGACACCTACGGTGGGTGGGGAGCACACGGTGGT GGGGCGTTTTCCGGCAAGGACCCGACCAAGGTTGACCGGAGGGGAGCCTACATTGCAAGGCAGGCGGCCAAGAGCATCGTTGCCAATGG CCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCA TTGGGGTGCCGGAACC GCTTTCGGTGTTTGTCGACACTTACGGCACGGG CAAGATCCCTGACAGGGAGA TCCTCAGGATTGTCAC GGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCAACCTCGCCCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGGGGCTTACGGGCACTTCGGGAGGGAGGACCCTGACTTCCCCTGGGAGGGGGTGAAACCCCTCAAGTGGGAGGAGCCTTTTGCATAAACAAACACTTGCAGCCTTTAAAACTGTTTTGGAAATGTTTCCATTGATTTTGGAGATGTTTTTATt                                                                                                                                                                                                   ]
[-] EMBL CB618129             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTGATGAGAAGACCATCTTCCATCTCAACCCGTCAGGTCGGTTCGTCATCGGTGGACCTCATGGAGATGCAGGTCTCACCGGGCGCAAGATCATCATCGACACCTACGGTGGCTGGGGAGCACACGGTGGT GGCGCGTTCTCCGGCAAGGACCCGACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCAAGAGCATCGTTGCCAATGG CCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCA TTGGCGTGCCGGAACC GCTCTCGGTGTTCGTCGACACTTACGGCACGGG CAAGATCCCTGACAGGGAGA TCCTCAGGATTGTCAC GGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCAACCTCGCCCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGCGGCTTACGGGCACTTCGGGAGGGAGGACCCTGACTTCACCTGGGAGGTGGTGAAACCCCTCAAGTGGGAGGAGCCTTCTGCATAAACAAACACTTGCAGCCTCTAAAACTGTTTTGGAAATGTTTCCATTGATTTTGGAGATGTTTTTATCTACACTTCAGCCTCTGAACTTAATCAGACCGTCACTACATGTATCTATTTTCACTGCCTTAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGAGTGGTGAGGGGATGATGAAACTATAAAGAAGACTGAAGCCTCTCATTGGTCCTAAAAAAAAAAAAGGA]
[-] EMBL CB618126             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTGATGAGAAGACCATCTTCCATCTCAACCCGTCAGGTCGGTTCGTCATCGGTGGACCTCATGGAGATGCAGGTCTCACCGGGCGCAAGATCATCATCGACACCTACGGTGGCTGGGGAGCACACGGTGGT GGCGCGTTCTCCGGCAAGGACCCGACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCAAGAGCATCGTTGCCAATGG CCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCA TTGGCGTGCCGGAACC GCTCTCGGTGTTCGTCGACACTTACGGCACGGG CAAGATCCCTGACAGGGAGA TCCTCAGGATTGTCAC GGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCAACCTCGACCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGCGGCTTACGGGCACTTCGGGAGGGAGGACCCTGACTTCACCTGGGAGGTGGTGAAACCCCTCAAGTGGGAGGAGCCTTCTGCATAAACAAACACTTGCAGCCTCTAAAACTGTTTTGGAAATGTTTCCATTGATTTTGGAGATGTTTTTATCTACACTTCAGCCTCTGAACTTAATCAGACCGTCACTACATGTATCTATTTTCACTGCCTTAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGAGTGGTGAGGGGATGATGAAACTATAAAGAA ACTGAAGCCTCTC                        ]
[-] EMBL CB618194             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGATGAGAAGACCATTTTCCATCTCAACCCGTCAGGTCGCTTCGTCATCGGTGGACCTCATGGAGATGCAGGTCTCACCGGGCGCAAGATCATCATCGACACCTACGGTGGTTGGGGAGCACACGGTGGT GGCGCGTTCTCCGGCAAGGACCCGACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCAAGAGCATCGTTGCCAATGG CCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCA TTGGCGTGCCGGAACC GCTCTCGGTGTTCGTCGACACTTACGGCACGGG CAAGATCCCTGACAGGGAGA TCCTCAGGATTGTCAC GGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCAACCTCGACCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGCGGCTTACGGGCACTTCGGGAGGGAGGACCCTGACTTCACCTGGGAGGTGGTGAAACCCCTCAAGTGGGAGGAGCCTTCTGCATAAACAAACACTTGCAGCCTCTAAAACTGTTTTGGAAATGTTTCCATTGATTTTGGAGATGTTTTTATCTACACTTCAGCCTCTGAACTTAATCAGACCGTCACTACATGTATCTATTTTCACTGCCTTAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGAGTGGTGAGGGGATGATGAAACTATAAAGAA ACTGAAGCCTCTCATTGGTCCTAAAAAAAAAAAAa  ]
[-] EMBL CB618234             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GGTCGCTTCGTCATCGGTGGACCTCATGGAGATGCAGGTCTCACCGGGCGCAAGATCATCATCGACACCTACGGTGGCTGGGGAGCACACGGTGGT GGCGCGTTCTCCGGCAAGGACCCGACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCAAGAGCATCGTTGCCAATGG CCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCA TTGGCGTGCCGGAACC GCTCTCGGTGTTCGTCGACACTTACGGCACGGG CAAGATCCCTGACAGGGAGA TCCTCAGGATTGTCAC GGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCAACCTCGACCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGCGGCTTACGGGCACTTCGGGAGGGAGGACCCTGACTTCACCTGGGAGGTGGTGAAACCCCTCAAGTGGGAGGAGCCTTCTGCATAAACAAACACTTGCAGCCTCTAAAACTGTTTTGGAAATGTTTCCATTGATTTTGGAGATGTTTTTATCTACACTTCAGCCTCTGAACTTAATCAGACCGTCACTACATGTATCTATTTTCACTGCCTTAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGAGTGGTGAGGGGATGATGAAACTATAAAGAA ACTGAAGCCTCTC                        ]
[-] EMBL CB625972             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGGACCCGACCAAGGTTGACCGGAGGGGAGCCTACATTGCAAGGCAGGGGGCCAAGAGCATTGTTGCCAATGG CCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCA TTGGGGTGCCGGAACC GCTTTCGGTGTTTGTGGACAATTACGGCACGGG CAAGATCCCTGACAGGGGGA TCCTCAGGATTGTCCC GGAGAATTTGGATTTCAGGCCAGGCATGATCATCATCAACCTCGACCTGATGAGGGGGGGCAATGGCCGCTACCTGAAGACGGGGGCTTACGGGCACTTCGGGAGGGAGGACCCTGACTTCCCCTGGGAGGGGGGGAAACCCCTCAAGTGGGAGGAGCTTTTTGCATAAACAAACACTTGCAGCCTTTAAAAATGTTTTGGAAAAGTTTCCATTGATTTGGGAGATGTTTTTATTTACACTTCAGCCTCTGAAGTTAATCAGACGGTCACTACAGGTATTTATTTTCCCTCCCTTAGTAGCAGGCAGGTAGGT                                                                                                                     ]


>consensus_14308#0 GCTCTCCGTTCAAACCGTCCCGCGCCGCCGCGGCCGCTGCAACCCGCGCGCGCGGACTCC TGCCTCTCGGTCGAAGGAGATGGCTGAGGTTGACACCTTCCTCTTCACTTCCGAGTCCGT CAATGAGGGACACCCTGACAAGCTCTGCGACCAGATATCCGATGCGGTGCTTGATGCGTG CCTTGCTGAAGACCCTGAAAGCAAGGTTGCCTGTGAGACCTGCACCAAGACCAACATGGT CATGGTGTTTGGTGAGATCACTACCAAGGCCAATGTTGACTATGAGAAGATCGTCAGGGA TACTTGCCGCGGCATCGGCTTTGTGTCCAATGATGTAGGCCTTGATGCTGAACACTGTAA GGTGCTTGTCAACATTGAGCAGCAATCCCCTGACATCGCACAGGGTGTCCATGGGCACTT CACCAAGCGCCCAGAGGAGATTGGTGCCGGTGACCAGGGGCATATGTTTGGATATGCAAC CGATGAGACCCCTGAATTGATGCCACTCAGCCATGTTCTTGCTACCAAGCTCGGTGCCCG TCTCACCGAGGTCCGCAAGAACGGGGCATGCGCATGGCTGAGGCCTGATGGGAAGACGCA AGTGACAGTGGAGTACCAGAACGACAATGGCGCCATGGTCCCTCTCCGCGTCCACACCGT GCTCATCTCCACCCAGCACGATGAGACCGTGACCAACGACGAAATCGCGGCTGACCTGAA GGAGCATGTCATCAAGCCTGTCATCCCAGAGCAGTACCTTGATGAGAAGACCATCTTCCA TCTCAACCCGTCAGGTCGCTTCGTCATCGGTGGACCTCATGGAGATGCAGGTCTCACCGG GCGCAAGATCATCATCGACACCTACGGTGGCTGGGGAGCACACGGTGGTGGCGCGTTCTC CGGCAAGGACCCGACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCAA GAGCATCGTTGCCAATGGCCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCATTGG CGTGCCGGAACCGCTCTCGGTGTTCGTCGACACTTACGGCACGGGCAAGATCCCTGACAG GGAGATCCTCAGGATTGTCACGGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCAA CCTCGACCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGCGGCTTACGGGCACTT CGGGAGGGAGGACCCTGACTTCACCTGGGAGGTGGTGAAACCCCTCAAGTGGGAGGAGCC TTCTGCATAAACAAACACTTGCAGCCTCTAAAACTGTTTTGGAAATGTTTCCATTGATTT TGGAGATGTTTTTATCTACACTTCAGCCTCTGAACTTAATCAGACCGTCACTACATGTAT CTATTTTCACTGCCTTAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTTCTTG TGTTAAAGAAGCTTGTGTGGTGAGTGGTGAGGGGATGATGAAACTATAAAGAAACTGAAG CCTCTCATTGGTCCTAAAAAAAAAAAAGGA



consensusID : consensus_14308#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 687
fasta sequence
                              [GCTGGGGAGCACACGGTGGTGGCGCGTTCTCCGGCAAGGACCCCGACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCAAGAGCATCGTTGCCAATGGCCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCATAGGCGTGCCGGAACCGCTCTCGGTGTTCGTCGACACTTACGGCACGGGCAAGATCCCTGACAGGGAGATCCTCAGGATTGTCACGGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCAACCTCGACCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGCGGCTTACGGGCACTTCGGGAGGGAGGACCCTGACTTCACCTGGGAGGTGGTGAAACCCCTCAAGTGGGAGGAGCCCTCTGCATAAACAAACACTTGCAGCCTCTAAAACTGTTTTGGAAATGTTTCCATTGATTTTGGAGATGTTTTTATCTACACTTCAGCCTCTGAACTTAATCAGACCGTCACTACATGTATCTATTTTCACTGCCTTAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGAGTGGTGAGGGGATGATGAAACTATAAAGAAACTGAAGCCTCTCATTGGTCCTTGTCTTGTGCGCAGTGCACTTCTGTCCAAAAAAAAAAAAA]

[-] EMBL CA763223             [GCTGGGGAGCACACGGTGGTGGCGCGTTCTCCGGCAAGGACCCCGACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCAAGAGCATCGTTGCCAATGGCCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCATAGGCGTGCCGGAACCGCTCTCGGTGTTCGTCGACACTTACGGCACGGGCAAGATCCCTGACAGGGAGATCCTCAGGATTGTCACGGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCAACCTCGACCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGCGGCTTACGGGCACTTCGGGAGGGAGGACCCTGACTTCACCTGGGAGGTGGTGAAACCCCTCAAGTGGGAGGAGCCCTCTGCATAAACAAACACTTGCAGCCTCTAAAACTGTTTTGGAAATGTTTCCATTGATTTTGGAGATGTTTTTATCTACACTTCAGCCTCTGAACTTAATCAGACCGTCACTACATGTATCTATTTTCACTGCCTTAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGAGTGGTGAGGGGATGATGAAACTATAAAGAAACTGAAGCCTCTCATTGGTCCTTGTCTTGTGCGCAGTGCACTTCTGTCCAAAAAAAAAAAAA]


>consensus_14308#1 GCTGGGGAGCACACGGTGGTGGCGCGTTCTCCGGCAAGGACCCCGACCAAGGTTGACCGG AGCGGAGCCTACATTGCAAGGCAGGCGGCCAAGAGCATCGTTGCCAATGGCCTCGCGCGC CGCTGCATTGTCCAGGTGTCGTATGCCATAGGCGTGCCGGAACCGCTCTCGGTGTTCGTC GACACTTACGGCACGGGCAAGATCCCTGACAGGGAGATCCTCAGGATTGTCACGGAGAAC TTCGATTTCAGGCCAGGCATGATCATCATCAACCTCGACCTGATGAGGGGTGGCAATGGC CGCTACCTGAAGACGGCGGCTTACGGGCACTTCGGGAGGGAGGACCCTGACTTCACCTGG GAGGTGGTGAAACCCCTCAAGTGGGAGGAGCCCTCTGCATAAACAAACACTTGCAGCCTC TAAAACTGTTTTGGAAATGTTTCCATTGATTTTGGAGATGTTTTTATCTACACTTCAGCC TCTGAACTTAATCAGACCGTCACTACATGTATCTATTTTCACTGCCTTAGTAGCAGGCAG GTATGTTTAAGGTCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGAGTGGT GAGGGGATGATGAAACTATAAAGAAACTGAAGCCTCTCATTGGTCCTTGTCTTGTGCGCA GTGCACTTCTGTCCAAAAAAAAAAAAA



consensusID : consensus_14308#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 236
fasta sequence
                              [ACCGTCACTACATGTATCTATTTTCACGTGCACTTGAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGATGTGAGGGGATGATGAAACTATAAAGAAACTGAAGCCTCTCATTGGTCCTTGTCTTGTGCGCAGTGCACTTCTGTCACAAATGGGGTGTCTTGCTTGATCTCTGAATAATTAAGCAAGCTCTCTTGCAAAAAA]

[+] EMBL BI801530             [ACCGTCACTACATGTATCTATTTTCACGTGCACTTGAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGATGTGAGGGGATGATGAAACTATAAAGAAACTGAAGCCTCTCATTGGTCCTTGTCTTGTGCGCAGTGCACTTCTGTCACAAATGGGGTGTCTTGCTTGATCTCTGAATAATTAAGCAAGCTCTCTTGCAAAAAA]


>consensus_14308#2 ACCGTCACTACATGTATCTATTTTCACGTGCACTTGAGTAGCAGGCAGGTATGTTTAAGG TCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGATGTGAGGGGATGATGAA ACTATAAAGAAACTGAAGCCTCTCATTGGTCCTTGTCTTGTGCGCAGTGCACTTCTGTCA CAAATGGGGTGTCTTGCTTGATCTCTGAATAATTAAGCAAGCTCTCTTGCAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14308#0      GCTCTCCGTTCAAACCGTCCCGCGCCGCCGCGGCCGCTGCAACCCGCGCGCGCGGACTCC 60
consensus_14308#1      ------------------------------------------------------------
consensus_14308#2      ------------------------------------------------------------
                                                                                   

consensus_14308#0      TGCCTCTCGGTCGAAGGAGATGGCTGAGGTTGACACCTTCCTCTTCACTTCCGAGTCCGT 120
consensus_14308#1      ------------------------------------------------------------
consensus_14308#2      ------------------------------------------------------------
                                                                                   

consensus_14308#0      CAATGAGGGACACCCTGACAAGCTCTGCGACCAGATATCCGATGCGGTGCTTGATGCGTG 180
consensus_14308#1      ------------------------------------------------------------
consensus_14308#2      ------------------------------------------------------------
                                                                                   

consensus_14308#0      CCTTGCTGAAGACCCTGAAAGCAAGGTTGCCTGTGAGACCTGCACCAAGACCAACATGGT 240
consensus_14308#1      ------------------------------------------------------------
consensus_14308#2      ------------------------------------------------------------
                                                                                   

consensus_14308#0      CATGGTGTTTGGTGAGATCACTACCAAGGCCAATGTTGACTATGAGAAGATCGTCAGGGA 300
consensus_14308#1      ------------------------------------------------------------
consensus_14308#2      ------------------------------------------------------------
                                                                                   

consensus_14308#0      TACTTGCCGCGGCATCGGCTTTGTGTCCAATGATGTAGGCCTTGATGCTGAACACTGTAA 360
consensus_14308#1      ------------------------------------------------------------
consensus_14308#2      ------------------------------------------------------------
                                                                                   

consensus_14308#0      GGTGCTTGTCAACATTGAGCAGCAATCCCCTGACATCGCACAGGGTGTCCATGGGCACTT 420
consensus_14308#1      ------------------------------------------------------------
consensus_14308#2      ------------------------------------------------------------
                                                                                   

consensus_14308#0      CACCAAGCGCCCAGAGGAGATTGGTGCCGGTGACCAGGGGCATATGTTTGGATATGCAAC 480
consensus_14308#1      ------------------------------------------------------------
consensus_14308#2      ------------------------------------------------------------
                                                                                   

consensus_14308#0      CGATGAGACCCCTGAATTGATGCCACTCAGCCATGTTCTTGCTACCAAGCTCGGTGCCCG 540
consensus_14308#1      ------------------------------------------------------------
consensus_14308#2      ------------------------------------------------------------
                                                                                   

consensus_14308#0      TCTCACCGAGGTCCGCAAGAACGGGGCATGCGCATGGCTGAGGCCTGATGGGAAGACGCA 600
consensus_14308#1      ------------------------------------------------------------
consensus_14308#2      ------------------------------------------------------------
                                                                                   

consensus_14308#0      AGTGACAGTGGAGTACCAGAACGACAATGGCGCCATGGTCCCTCTCCGCGTCCACACCGT 660
consensus_14308#1      ------------------------------------------------------------
consensus_14308#2      ------------------------------------------------------------
                                                                                   

consensus_14308#0      GCTCATCTCCACCCAGCACGATGAGACCGTGACCAACGACGAAATCGCGGCTGACCTGAA 720
consensus_14308#1      ------------------------------------------------------------
consensus_14308#2      ------------------------------------------------------------
                                                                                   

consensus_14308#0      GGAGCATGTCATCAAGCCTGTCATCCCAGAGCAGTACCTTGATGAGAAGACCATCTTCCA 780
consensus_14308#1      ------------------------------------------------------------
consensus_14308#2      ------------------------------------------------------------
                                                                                   

consensus_14308#0      TCTCAACCCGTCAGGTCGCTTCGTCATCGGTGGACCTCATGGAGATGCAGGTCTCACCGG 840
consensus_14308#1      ------------------------------------------------------------
consensus_14308#2      ------------------------------------------------------------
                                                                                   

consensus_14308#0      GCGCAAGATCATCATCGACACCTACGGTGGCTGGGGAGCACACGGTGGTGGCGCGTTCTC 900
consensus_14308#1      -----------------------------GCTGGGGAGCACACGGTGGTGGCGCGTTCTC 31
consensus_14308#2      ------------------------------------------------------------
                                                                                   

consensus_14308#0      CGGCAAGGACCC-GACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCA 959
consensus_14308#1      CGGCAAGGACCCCGACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCA 91
consensus_14308#2      ------------------------------------------------------------
                                                                                   

consensus_14308#0      AGAGCATCGTTGCCAATGGCCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCATTG 1019
consensus_14308#1      AGAGCATCGTTGCCAATGGCCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCATAG 151
consensus_14308#2      ------------------------------------------------------------
                                                                                   

consensus_14308#0      GCGTGCCGGAACCGCTCTCGGTGTTCGTCGACACTTACGGCACGGGCAAGATCCCTGACA 1079
consensus_14308#1      GCGTGCCGGAACCGCTCTCGGTGTTCGTCGACACTTACGGCACGGGCAAGATCCCTGACA 211
consensus_14308#2      ------------------------------------------------------------
                                                                                   

consensus_14308#0      GGGAGATCCTCAGGATTGTCACGGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCA 1139
consensus_14308#1      GGGAGATCCTCAGGATTGTCACGGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCA 271
consensus_14308#2      ------------------------------------------------------------
                                                                                   

consensus_14308#0      ACCTCGACCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGCGGCTTACGGGCACT 1199
consensus_14308#1      ACCTCGACCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGCGGCTTACGGGCACT 331
consensus_14308#2      ------------------------------------------------------------
                                                                                   

consensus_14308#0      TCGGGAGGGAGGACCCTGACTTCACCTGGGAGGTGGTGAAACCCCTCAAGTGGGAGGAGC 1259
consensus_14308#1      TCGGGAGGGAGGACCCTGACTTCACCTGGGAGGTGGTGAAACCCCTCAAGTGGGAGGAGC 391
consensus_14308#2      ------------------------------------------------------------
                                                                                   

consensus_14308#0      CTTCTGCATAAACAAACACTTGCAGCCTCTAAAACTGTTTTGGAAATGTTTCCATTGATT 1319
consensus_14308#1      CCTCTGCATAAACAAACACTTGCAGCCTCTAAAACTGTTTTGGAAATGTTTCCATTGATT 451
consensus_14308#2      ------------------------------------------------------------
                                                                                   

consensus_14308#0      TTGGAGATGTTTTTATCTACACTTCAGCCTCTGAACTTAATCAGACCGTCACTACATGTA 1379
consensus_14308#1      TTGGAGATGTTTTTATCTACACTTCAGCCTCTGAACTTAATCAGACCGTCACTACATGTA 511
consensus_14308#2      --------------------------------------------ACCGTCACTACATGTA 16
                                                                   ****************

consensus_14308#0      TCTATTTTCAC---TGCCTTAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTT 1436
consensus_14308#1      TCTATTTTCAC---TGCCTTAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTT 568
consensus_14308#2      TCTATTTTCACGTGCACTTGAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTT 76
                       ***********     * * ****************************************

consensus_14308#0      CTTGTGTTAAAGAAGCTTGTGTGGTGAGTGGTGAGGGGATGATGAAACTATAAAGAAACT 1496
consensus_14308#1      CTTGTGTTAAAGAAGCTTGTGTGGTGAGTGGTGAGGGGATGATGAAACTATAAAGAAACT 628
consensus_14308#2      CTTGTGTTAAAGAAGCTTGTGTGGTGAT--GTGAGGGGATGATGAAACTATAAAGAAACT 134
                       ***************************   ******************************

consensus_14308#0      GAAGCCTCTCATTGGTCCTAAAAAAAAAAAAGGA-------------------------- 1530
consensus_14308#1      GAAGCCTCTCATTGGTCCTTGTCTTGTGCGCAGTGCACTTCTGTCCAAAAAAAAAAAAA- 687
consensus_14308#2      GAAGCCTCTCATTGGTCCTTGTCTTGTGCGCAGTGCACTTCTGTCACAAATGGGGTGTCT 194
                       *******************             *                           

consensus_14308#0      ------------------------------------------
consensus_14308#1      ------------------------------------------
consensus_14308#2      TGCTTGATCTCTGAATAATTAAGCAAGCTCTCTTGCAAAAAA 236
                                                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)