These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14308#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1530 fasta sequence [GCTCTCCGTTCAAACCGTCCCGCGCCGCCGCGGCCGCTGCAACCCGCGCGCGCGGACTCCTGCCTCTCGGTCGAAGGAGATGGCTGAGGTTGACACCTTCCTCTTCACTTCCGAGTCCGTCAATGAGGGACACCCTGACAAGCTCTGCGACCAGATATCCGATGCGGTGCTTGATGCGTGCCTTGCTGAAGACCCTGAAAGCAAGGTTGCCTGTGAGACCTGCACCAAGACCAACATGGTCATGGTGTTTGGTGAGATCACTACCAAGGCCAATGTTGACTATGAGAAGATCGTCAGGGATACTTGCCGCGGCATCGGCTTTGTGTCCAATGATGTAGGCCTTGATGCTGAACACTGTAAGGTGCTTGTCAACATTGAGCAGCAATCCCCTGACATCGCACAGGGTGTCCATGGGCACTTCACCAAGCGCCCAGAGGAGATTGGTGCCGGTGACCAGGGGCATATGTTTGGATATGCAACCGATGAGACCCCTGAATTGATGCCACTCAGCCATGTTCTTGCTACCAAGCTCGGTGCCCGTCTCACCGAGGTCCGCAAGAACGGGGCATGCGCATGGCTGAGGCCTGATGGGAAGACGCAAGTGACAGTGGAGTACCAGAACGACAATGGCGCCATGGTCCCTCTCCGCGTCCACACCGTGCTCATCTCCACCCAGCACGATGAGACCGTGACCAACGACGAAATCGCGGCTGACCTGAAGGAGCATGTCATCAAGCCTGTCATCCCAGAGCAGTACCTTGATGAGAAGACCATCTTCCATCTCAACCCGTCAGGTCGCTTCGTCATCGGTGGACCTCATGGAGATGCAGGTCTCACCGGGCGCAAGATCATCATCGACACCTACGGTGGCTGGGGAGCACACGGTGGT-GGCGCGTTCTCCGGCAAGGACCCGACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCAAGAGCATCGTTGCCAATGG-CCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCA-TTGGCGTGCCGGAACC-GCTCTCGGTGTTCGTCGACACTTACGGCACGGG-CAAGATCCCTGACAGGGAGA-TCCTCAGGATTGTCAC-GGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCAACCTCGACCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGCGGCTTACGGGCACTTCGGGAGGGAGGACCCTGACTTCACCTGGGAGGTGGTGAAACCCCTCAAGTGGGAGGAGCCTTCTGCATAAACAAACACTTGCAGCCTCTAAAACTGTTTTGGAAATGTTTCCATTGATTTTGGAGATGTTTTTATCTACACTTCAGCCTCTGAACTTAATCAGACCGTCACTACATGTATCTATTTTCACTGCCTTAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGAGTGGTGAGGGGATGATGAAACTATAAAGAA-ACTGAAGCCTCTCATTGGTCCTAAAAAAAAAAAAGGA] [+] EMBL CB618195 [GCTCTCCGTTCAAACCGTCCCGCGCCGCCGCGGCCGCTGCAACCCGCGCGCGCGGACTCCTGCCTCTCGGTCGAAGGAGATGGCTGAGGTTGACACCTTCCTCTTCACTTCCGAGTCCGTCAATGAGGGACACCCTGACAAGCTCTGCGACCAGATATCCGATGCGGTGCTTGATGCGTGCCTTGCTGAAGACCCTGAAAGCAAGGTTGCCTGTGAGACCTGCACCAAGACCAACATGGTCATGGTGTTTGGTGAGATCACTACCAAGGCCAATGTTGACTATGAGAAGATCGTCAGGGATACTTGCCGCGGCATCGGCTTTGTGTCCAATGATGTAGGCCTTGATGCTGAACACTGTAAGGTGCTTGTCAACATTGAGCAGCAATCCCCTGACATCGCACAGGGTGTCCATGGGCACTTCACCAAGCGCCCAGAGGAGATTGGTGCCGGTGACCAGGGGCATATGTTTGGATATGCAACCGATGAGACCCCTGAATTGATGCCACTCAGCCATGTTCTTGCTACCAAGCTCGGTGCCCGTCTCACCGAGGTCCGCAAGAACGGGGCATGCGCATGGCTGAGGCCTGATGGGAAGACGCAAGTGACAGTGGAGTACCAGAACGACAATGGCGCCATGGTCCCTCTCCGCGTCCACACCGTGCTCATCTCCACCCAGCACGATGAGACCGTGACCAACGACGAAATCGCGGCTGACCTGAAGGAGCATGTCATCAAGCCTGTCATCCCAGAGCAG ] [+] EMBL CB618233 [GCTCTCCGTTTAAACCGTCCCGCGCCGCCGCGGCCGCTGCAACCCGCGCGCGCGGACTCCTGCCTCTCGGTCGAAGGAGATGGCTGAGGTTGACACCTTCCTCTTCACTTCCGAGTCCGTCAATGAGGGACACCCTGACAAGCTCTGCGACCAGATATCCGATGCGGTGCTTGATGCGTGCCTTGCTGAAGACCCTGAAAGCAAGGTTGCCTGTGAGACCTGCACCAAGACCAACATGGTCATGGTGTTTGGTGAGATCACTACCAAGGCCAATGTTGACTATGAGAAGATCGTCAGGGATACTTGCCGCGGCATCGGCTTTGTGTCCAATGATGTAGGCCTTGATGCTGAACACTGTAAGGTGCTTGTCAACATTGAGCAGCAATCCCCTGACATCGCACAGGGTGTCCATGGGCACTTCACCAAGCGCCCAGAGGAGATTGGTGCCGGTGACCAGGGGCATATGTTTGGATATGCAACCGATGAGACCCCTGAATTGATGCCACTCAGCCATGTTCTTGCTACCAAGCTCGGTGCCCGTCTCACCGAGGTCCGCAAGAACGGGGCATGCGCATGGCTGAGGCCTGATGGGAAGACGCAAGTGACAGTGGAGTACCAGAACGACAATGGCGCCATGGTCCCTCTCCGCGTCCACACCGTGCTCATCTCCACCCAGCACGATGAGACCGTGACCCACGACGAAATCGCGGCTGACCTGAAGGAGCA ] [+] EMBL CB618165 [GCTCTCCGTTCAAACCGTCCCGCGCCGCCGCGGCCGCTGCAACCCGCGCGCGCGGACTCCTGCCTCTCGGTCGAAGGAGATGGCTGAGGTTGACACCTTCCTCTTCACTTCCGAGTCCGTCAATGAGGGACACCCTGACAAGCTCTGCGACCAGATATCCGATGCGGTGCTTGATGCGTGCCTTGCTGAAGACCCTGAAAGCAAGGTTGCCTGTGAGACCTGCACCAAGACCAACATGGTCATGGTGTTTGGTGAGATCACTACCAAGGCCAATGTTGACTATGAGAAGATCGTCAGGGATACTTGCCGCGGCATCGGCTTTGTGTCCAATGATGTAGGCCTTGATGCTGAACACTGTAAGGTGCTTGTCAACATTGAGCAGCAATCCCCTGACATCGCACAGGGTGTCCATGGGCACTTCACCAAGCGCCCAGAGGAGATTGGTGCCGGTGACCAGGGGCATATGTTTGGATATGCAACCGATGAGACCCCTGAATTGATGCCACTCAGCCATGTTCTTGCTACCAAGCTCGGTGCCCGTCTCACCGAGGTCCGCAAGAACGGGGCATGCGCATGGCTGAGGCCTGATGGGAAGACGCAAGTGACAGTGGAGTACCAGAACGACAATGGCGCCATGGTCCCTCTCCGCGTCCACACCGTGCTCATCTCCACCCAGCACGATGAGACCGTGACCAACGACGAAATCGCGGCTGACCTGAAGGAGCATGTCATCAAGCCTGTCATCCCAGAGCAGTACCTTGATGAGAAGACCAT ] [+] EMBL CB618128 [GCTCTCCGTTCAAACCGTCCCGCGCCGCCGCGGCCGCTGCAACCCGCGCGCGCGGACTCCTGCCTCTCGGTCGAAGGAGATGGCTGAGGTTGACACCTTCCTCTTCACTTCCGAGTCCGTCAATGAGGGACACCCTGACAAGCTCTGCGACCAGATATCCGATGCGGTGCTTGATGCGTGCCTTGCTGAAGACCCTGAAAGCAAGGTTGCCTGTGAGACCTGCACCAAGACCAACATGGTCATGGTGTTTGGTGAGATCACTACCAAGGCCAATGTTGACTATGAGAAGATCGTCAGGGATACTTGCCGCGGCATCGGCTTTGTGTCCAATGATGTAGGCCTTGATGCTGAACACTGTAAGGTGCTTGTCAACATTGAGCAGCAATCCCCTGACATCGCACAGGGTGTCCATGGGCACTTCACCAAGCGCCCAGAGGAGATTGGTGCCGGTGACCAGGGGCATATGTTTGGATATGCAACCGATGAGACCCCTGAATTGATGCCACTCAGCCATGTTCTTGCTACCAAGCTCGGTGCCCGTCTCACCGAGGTCCGCAAGAACGGGGCATGCGCATGGCTGAGGCCTGATGGGAAGACGCAAGTGACAGTGGAGTACCAGAACGACAATGGCGCCATGGTCCCTCTCCGCGTCCACACCGTGCTCATCTCCACCCAGCACGATGAGACCGTGACCAACGACGAAATCGCGGCTGACCTGAAGGAGCATGTCATCAAGCCTGTCATCCCAGAGCAGTACCTTGATGAGAAGACCA ] [+] EMBL CB618193 [GCTCTCCCTT AAACCGTCCCGCGCCGCCGCGGCCGCTGCAACCCGCGCGCGCGGACTCCTGCCTCTCGGTCGAAGGAGATGGCTGAGGTTGACACCTTCCTCTTCACTTCCGAGTCCGTCAATGAGGGACACCCTGACAAGCTCTGCGACCAGATATCCGATGCGGTGCTTGATGCGTGCCTTGCTGAAGACCCTGAAAGCAAGGTTGCCTGTGAGACCTGCACCAAGACCAACATGGTCATGGTGTTTGGTGAGATCACTACCAAGGCCAATGTTGACTATGAGAAGATCGTCAGGGATACTTGCCGCGGCATCGGCTTTGTGTCCAATGATGTAGGCCTTGATGCTGAACACTGTAAGGTGCTTGTCAACATTGAGCAGCAATCCCCTGACATCGCACAGGGTGTCCATGGGCACTTCACCAAGCGCCCAGAGGAGATTGGTGCCGGTGACCAGGGGCATATGTTTGGATATGCAACCGATGAGACCCCTGAATTGATGCCACTCAGCCATGTTCTTGCTACCAAGCTCGGTGCCCGTCTCACCGAGGTCCGCAAGAACGGGGCATGCGCATGGCTGAGGCCTGATGGGAAGACGCAAGTGACAGTGGAGTACCAGAACGACAATGGCGCCATGGTCCCTCTCCGCGTCCACACCGTGCTCATCTCCACCCAGCACGATGAGACCGTGACCAACGACGAAATCGCGGCTGACCTGAAGGAGCATGTCATCAAGCCTGTCATCCCAGAGCAGTACCTTGATGAGAAGACCAT ] [+] EMBL CB618125 [GCTCTCCCTT AAAGCGTCCCGCGCCGCCGCGGCCGCTGCAACCCGCGCGCGCGGACTCCTGCCTCTCGGTCGAAGGAGATGGCTGAGGTTGACACCTTCCTCTTCACTTCCGAGTCCGTCAATGAGGGACACCCTGACAAGCTCTGCGACCAGATATCCGATGCGGTGCTTGATGCGTGCCTTGCTGAAGACCCTGAAAGCAAGGTTGCCTGTGAGACCTGCACCAAGACCAACATGGTCATGGTGTTTGGTGAGATCACTACCAAGGCCAATGTTGACTATGAGAAGATCGTCAGGGATACTTGCCGCGGCATCGGCTTTGTGTCCAATGATGTAGGCCTTGATGCTGAACACTGTAAGGTGCTTGTCAACATTGAGCAGCAATCCCCTGACATCGCACAGGGTGTCCATGGGCACTTCACCAAGCGCCCAGAGGAGATTGGTGCCGGTGACCAGGGGCATATGTTTGGATATGCAACCGATGAGACCCCTGAATTGATGCCACTCAGCCATGTTCTTGCTACCAAGCTCGGTGCCCGTCTCACCGAGGTCCGCAAGAACGGGGCATGCGCATGGCTGAGGCCTGATGGGAAGACGCAAGTGACAGTGGAGTACCAGAACGACAATGGCGCCATGGTCCCTCTCCGCGTCCACACCGTGCTCATCTCCACCCAGCACGATGAGACCGTGACCAACGACGAAATCGCGGCTGACCTGAAGGAGCATGTCATCAAGCCTGTCATCCCAGAGCAGTACCTTGATGAGAAGACCA ] [+] EMBL CA765675 [ GCTTTGTGTCCAATGATGTAGGCCTTGATGCTGAACACTGTAAGGTTCTTGTCAACATTGAGCAGCAATCCCCTGACATCGCACAGGGTGTCCATGGGCACTTCACCAAGCGCCCAGAGGAGATTGGTGCCGGTGACCAGGGGCATATGTTTGGATATGCAACCGATGAGACCCCTGAATTGATGCCACTCAGCCATGTTCTTGCTACCAAGCTCGGTGCCCGTCTCACCGAGGTCCGCAAGAACGGGGCATGCGCATGGCTGAGGCCTGATGGGAAGACGCAAGTGACAGTGGAGTACCAGAACGACAATGGCGCCATGGTCCCTCTCCGCGTCCACACCGTGCTCATCTCCACCCAGCACGATGAGACCGTGACCAACGACGAAATCGCGGCTGACCTGAAGGAGCATGTCATCAAGCCTGTCATCCCAGAGCAGTACCTTGATGAGAAGACCATCTTCCATCTCAACCCGTCAGGTCGCTTCGTCATCGGTGGACCTCATGGAGATGCAGGTCTCACCGGGCGCAAGATCATCATCGACACCTACGGTGGCTGGGGAGCACACGGTGGTGGGCGCGTTCTCCGGCAAGGACCCGACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCAAGAGCATCGTTGCCAATGGCCCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTACGCCATTTGGCGTGCCGGAACCGGTTTTNGGGGTTCGTCGACACTTACNGCACGGGCCAAGATCCCTG CAGGGAAANNCCTCAGGATTGTCACNGGANAACTTCGATTTCAGGNCAGGCATGATCA ] [-] EMBL CB618166 [ TCATCAAGCCTGTCATCCCAGAGCAGTACCTTGATGAGAAGACCATCTTCCATCTCAACCCGTCAGGTCGCTTCGTCATCGGTGGACCTCATGGAGATGCAGGTCTCACCGGGCGCAAGATCATCATCGACACCTACGGTGGCTGGGGAGCACACGGTGGT GGCGCGTTCTCCGGCAAGGACCCGACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCAAGAGCATCGTTGCCAATGG CCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCA TTGGCGTGCCGGAACC GCTCTCGGTGTTCGTCGACACTTACGGCACGGG CAAGATCCCTGACAGGGAGA TCCTCAGGATTGTCAC GGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCAACCTCGACCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGCGGCTTACGGGCACTTCGGGAGGGAGGACCCTGACTTCACCTGGGAGGTGGTGAAACCCCTCAAGTGGGAGGAGCCTTCTGCATAAACAAACACTTGCAGCCTCTAAAACTGTTTTGGAAATGTTTCCATTGATTTTGGAGATGTTTTTATCTACACTTCAGCCTCTGAACTTAATCAGACCGTCACTACATGTATCTATTTTCACTGCCTTAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGAGTGGTGAGGGGATGATGAAACTATAAAGAA ACTGAAGCCTCTC ] [-] EMBL CB625973 [ GTACCTTGATGAGAAGACCATTTTCCATCTCAACCCGTCAGGTCGCTTGGTCATCGGTGGACCTCATGGAGATGCAGGTTTCACCGGGCGCAAGATCATCATCGACACCTACGGTGGGTGGGGAGCACACGGTGGT GGGGCGTTTTCCGGCAAGGACCCGACCAAGGTTGACCGGAGGGGAGCCTACATTGCAAGGCAGGCGGCCAAGAGCATCGTTGCCAATGG CCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCA TTGGGGTGCCGGAACC GCTTTCGGTGTTTGTCGACACTTACGGCACGGG CAAGATCCCTGACAGGGAGA TCCTCAGGATTGTCAC GGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCAACCTCGCCCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGGGGCTTACGGGCACTTCGGGAGGGAGGACCCTGACTTCCCCTGGGAGGGGGTGAAACCCCTCAAGTGGGAGGAGCCTTTTGCATAAACAAACACTTGCAGCCTTTAAAACTGTTTTGGAAATGTTTCCATTGATTTTGGAGATGTTTTTATt ] [-] EMBL CB618129 [ TTGATGAGAAGACCATCTTCCATCTCAACCCGTCAGGTCGGTTCGTCATCGGTGGACCTCATGGAGATGCAGGTCTCACCGGGCGCAAGATCATCATCGACACCTACGGTGGCTGGGGAGCACACGGTGGT GGCGCGTTCTCCGGCAAGGACCCGACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCAAGAGCATCGTTGCCAATGG CCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCA TTGGCGTGCCGGAACC GCTCTCGGTGTTCGTCGACACTTACGGCACGGG CAAGATCCCTGACAGGGAGA TCCTCAGGATTGTCAC GGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCAACCTCGCCCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGCGGCTTACGGGCACTTCGGGAGGGAGGACCCTGACTTCACCTGGGAGGTGGTGAAACCCCTCAAGTGGGAGGAGCCTTCTGCATAAACAAACACTTGCAGCCTCTAAAACTGTTTTGGAAATGTTTCCATTGATTTTGGAGATGTTTTTATCTACACTTCAGCCTCTGAACTTAATCAGACCGTCACTACATGTATCTATTTTCACTGCCTTAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGAGTGGTGAGGGGATGATGAAACTATAAAGAAGACTGAAGCCTCTCATTGGTCCTAAAAAAAAAAAAGGA] [-] EMBL CB618126 [ TTGATGAGAAGACCATCTTCCATCTCAACCCGTCAGGTCGGTTCGTCATCGGTGGACCTCATGGAGATGCAGGTCTCACCGGGCGCAAGATCATCATCGACACCTACGGTGGCTGGGGAGCACACGGTGGT GGCGCGTTCTCCGGCAAGGACCCGACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCAAGAGCATCGTTGCCAATGG CCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCA TTGGCGTGCCGGAACC GCTCTCGGTGTTCGTCGACACTTACGGCACGGG CAAGATCCCTGACAGGGAGA TCCTCAGGATTGTCAC GGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCAACCTCGACCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGCGGCTTACGGGCACTTCGGGAGGGAGGACCCTGACTTCACCTGGGAGGTGGTGAAACCCCTCAAGTGGGAGGAGCCTTCTGCATAAACAAACACTTGCAGCCTCTAAAACTGTTTTGGAAATGTTTCCATTGATTTTGGAGATGTTTTTATCTACACTTCAGCCTCTGAACTTAATCAGACCGTCACTACATGTATCTATTTTCACTGCCTTAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGAGTGGTGAGGGGATGATGAAACTATAAAGAA ACTGAAGCCTCTC ] [-] EMBL CB618194 [ TGATGAGAAGACCATTTTCCATCTCAACCCGTCAGGTCGCTTCGTCATCGGTGGACCTCATGGAGATGCAGGTCTCACCGGGCGCAAGATCATCATCGACACCTACGGTGGTTGGGGAGCACACGGTGGT GGCGCGTTCTCCGGCAAGGACCCGACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCAAGAGCATCGTTGCCAATGG CCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCA TTGGCGTGCCGGAACC GCTCTCGGTGTTCGTCGACACTTACGGCACGGG CAAGATCCCTGACAGGGAGA TCCTCAGGATTGTCAC GGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCAACCTCGACCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGCGGCTTACGGGCACTTCGGGAGGGAGGACCCTGACTTCACCTGGGAGGTGGTGAAACCCCTCAAGTGGGAGGAGCCTTCTGCATAAACAAACACTTGCAGCCTCTAAAACTGTTTTGGAAATGTTTCCATTGATTTTGGAGATGTTTTTATCTACACTTCAGCCTCTGAACTTAATCAGACCGTCACTACATGTATCTATTTTCACTGCCTTAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGAGTGGTGAGGGGATGATGAAACTATAAAGAA ACTGAAGCCTCTCATTGGTCCTAAAAAAAAAAAAa ] [-] EMBL CB618234 [ GGTCGCTTCGTCATCGGTGGACCTCATGGAGATGCAGGTCTCACCGGGCGCAAGATCATCATCGACACCTACGGTGGCTGGGGAGCACACGGTGGT GGCGCGTTCTCCGGCAAGGACCCGACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCAAGAGCATCGTTGCCAATGG CCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCA TTGGCGTGCCGGAACC GCTCTCGGTGTTCGTCGACACTTACGGCACGGG CAAGATCCCTGACAGGGAGA TCCTCAGGATTGTCAC GGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCAACCTCGACCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGCGGCTTACGGGCACTTCGGGAGGGAGGACCCTGACTTCACCTGGGAGGTGGTGAAACCCCTCAAGTGGGAGGAGCCTTCTGCATAAACAAACACTTGCAGCCTCTAAAACTGTTTTGGAAATGTTTCCATTGATTTTGGAGATGTTTTTATCTACACTTCAGCCTCTGAACTTAATCAGACCGTCACTACATGTATCTATTTTCACTGCCTTAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGAGTGGTGAGGGGATGATGAAACTATAAAGAA ACTGAAGCCTCTC ] [-] EMBL CB625972 [ AGGACCCGACCAAGGTTGACCGGAGGGGAGCCTACATTGCAAGGCAGGGGGCCAAGAGCATTGTTGCCAATGG CCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCA TTGGGGTGCCGGAACC GCTTTCGGTGTTTGTGGACAATTACGGCACGGG CAAGATCCCTGACAGGGGGA TCCTCAGGATTGTCCC GGAGAATTTGGATTTCAGGCCAGGCATGATCATCATCAACCTCGACCTGATGAGGGGGGGCAATGGCCGCTACCTGAAGACGGGGGCTTACGGGCACTTCGGGAGGGAGGACCCTGACTTCCCCTGGGAGGGGGGGAAACCCCTCAAGTGGGAGGAGCTTTTTGCATAAACAAACACTTGCAGCCTTTAAAAATGTTTTGGAAAAGTTTCCATTGATTTGGGAGATGTTTTTATTTACACTTCAGCCTCTGAAGTTAATCAGACGGTCACTACAGGTATTTATTTTCCCTCCCTTAGTAGCAGGCAGGTAGGT ] consensusID : consensus_14308#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 687 fasta sequence [GCTGGGGAGCACACGGTGGTGGCGCGTTCTCCGGCAAGGACCCCGACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCAAGAGCATCGTTGCCAATGGCCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCATAGGCGTGCCGGAACCGCTCTCGGTGTTCGTCGACACTTACGGCACGGGCAAGATCCCTGACAGGGAGATCCTCAGGATTGTCACGGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCAACCTCGACCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGCGGCTTACGGGCACTTCGGGAGGGAGGACCCTGACTTCACCTGGGAGGTGGTGAAACCCCTCAAGTGGGAGGAGCCCTCTGCATAAACAAACACTTGCAGCCTCTAAAACTGTTTTGGAAATGTTTCCATTGATTTTGGAGATGTTTTTATCTACACTTCAGCCTCTGAACTTAATCAGACCGTCACTACATGTATCTATTTTCACTGCCTTAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGAGTGGTGAGGGGATGATGAAACTATAAAGAAACTGAAGCCTCTCATTGGTCCTTGTCTTGTGCGCAGTGCACTTCTGTCCAAAAAAAAAAAAA] [-] EMBL CA763223 [GCTGGGGAGCACACGGTGGTGGCGCGTTCTCCGGCAAGGACCCCGACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCAAGAGCATCGTTGCCAATGGCCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCATAGGCGTGCCGGAACCGCTCTCGGTGTTCGTCGACACTTACGGCACGGGCAAGATCCCTGACAGGGAGATCCTCAGGATTGTCACGGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCAACCTCGACCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGCGGCTTACGGGCACTTCGGGAGGGAGGACCCTGACTTCACCTGGGAGGTGGTGAAACCCCTCAAGTGGGAGGAGCCCTCTGCATAAACAAACACTTGCAGCCTCTAAAACTGTTTTGGAAATGTTTCCATTGATTTTGGAGATGTTTTTATCTACACTTCAGCCTCTGAACTTAATCAGACCGTCACTACATGTATCTATTTTCACTGCCTTAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGAGTGGTGAGGGGATGATGAAACTATAAAGAAACTGAAGCCTCTCATTGGTCCTTGTCTTGTGCGCAGTGCACTTCTGTCCAAAAAAAAAAAAA] consensusID : consensus_14308#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 236 fasta sequence [ACCGTCACTACATGTATCTATTTTCACGTGCACTTGAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGATGTGAGGGGATGATGAAACTATAAAGAAACTGAAGCCTCTCATTGGTCCTTGTCTTGTGCGCAGTGCACTTCTGTCACAAATGGGGTGTCTTGCTTGATCTCTGAATAATTAAGCAAGCTCTCTTGCAAAAAA] [+] EMBL BI801530 [ACCGTCACTACATGTATCTATTTTCACGTGCACTTGAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGATGTGAGGGGATGATGAAACTATAAAGAAACTGAAGCCTCTCATTGGTCCTTGTCTTGTGCGCAGTGCACTTCTGTCACAAATGGGGTGTCTTGCTTGATCTCTGAATAATTAAGCAAGCTCTCTTGCAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14308#0 GCTCTCCGTTCAAACCGTCCCGCGCCGCCGCGGCCGCTGCAACCCGCGCGCGCGGACTCC 60 consensus_14308#1 ------------------------------------------------------------ consensus_14308#2 ------------------------------------------------------------ consensus_14308#0 TGCCTCTCGGTCGAAGGAGATGGCTGAGGTTGACACCTTCCTCTTCACTTCCGAGTCCGT 120 consensus_14308#1 ------------------------------------------------------------ consensus_14308#2 ------------------------------------------------------------ consensus_14308#0 CAATGAGGGACACCCTGACAAGCTCTGCGACCAGATATCCGATGCGGTGCTTGATGCGTG 180 consensus_14308#1 ------------------------------------------------------------ consensus_14308#2 ------------------------------------------------------------ consensus_14308#0 CCTTGCTGAAGACCCTGAAAGCAAGGTTGCCTGTGAGACCTGCACCAAGACCAACATGGT 240 consensus_14308#1 ------------------------------------------------------------ consensus_14308#2 ------------------------------------------------------------ consensus_14308#0 CATGGTGTTTGGTGAGATCACTACCAAGGCCAATGTTGACTATGAGAAGATCGTCAGGGA 300 consensus_14308#1 ------------------------------------------------------------ consensus_14308#2 ------------------------------------------------------------ consensus_14308#0 TACTTGCCGCGGCATCGGCTTTGTGTCCAATGATGTAGGCCTTGATGCTGAACACTGTAA 360 consensus_14308#1 ------------------------------------------------------------ consensus_14308#2 ------------------------------------------------------------ consensus_14308#0 GGTGCTTGTCAACATTGAGCAGCAATCCCCTGACATCGCACAGGGTGTCCATGGGCACTT 420 consensus_14308#1 ------------------------------------------------------------ consensus_14308#2 ------------------------------------------------------------ consensus_14308#0 CACCAAGCGCCCAGAGGAGATTGGTGCCGGTGACCAGGGGCATATGTTTGGATATGCAAC 480 consensus_14308#1 ------------------------------------------------------------ consensus_14308#2 ------------------------------------------------------------ consensus_14308#0 CGATGAGACCCCTGAATTGATGCCACTCAGCCATGTTCTTGCTACCAAGCTCGGTGCCCG 540 consensus_14308#1 ------------------------------------------------------------ consensus_14308#2 ------------------------------------------------------------ consensus_14308#0 TCTCACCGAGGTCCGCAAGAACGGGGCATGCGCATGGCTGAGGCCTGATGGGAAGACGCA 600 consensus_14308#1 ------------------------------------------------------------ consensus_14308#2 ------------------------------------------------------------ consensus_14308#0 AGTGACAGTGGAGTACCAGAACGACAATGGCGCCATGGTCCCTCTCCGCGTCCACACCGT 660 consensus_14308#1 ------------------------------------------------------------ consensus_14308#2 ------------------------------------------------------------ consensus_14308#0 GCTCATCTCCACCCAGCACGATGAGACCGTGACCAACGACGAAATCGCGGCTGACCTGAA 720 consensus_14308#1 ------------------------------------------------------------ consensus_14308#2 ------------------------------------------------------------ consensus_14308#0 GGAGCATGTCATCAAGCCTGTCATCCCAGAGCAGTACCTTGATGAGAAGACCATCTTCCA 780 consensus_14308#1 ------------------------------------------------------------ consensus_14308#2 ------------------------------------------------------------ consensus_14308#0 TCTCAACCCGTCAGGTCGCTTCGTCATCGGTGGACCTCATGGAGATGCAGGTCTCACCGG 840 consensus_14308#1 ------------------------------------------------------------ consensus_14308#2 ------------------------------------------------------------ consensus_14308#0 GCGCAAGATCATCATCGACACCTACGGTGGCTGGGGAGCACACGGTGGTGGCGCGTTCTC 900 consensus_14308#1 -----------------------------GCTGGGGAGCACACGGTGGTGGCGCGTTCTC 31 consensus_14308#2 ------------------------------------------------------------ consensus_14308#0 CGGCAAGGACCC-GACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCA 959 consensus_14308#1 CGGCAAGGACCCCGACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCA 91 consensus_14308#2 ------------------------------------------------------------ consensus_14308#0 AGAGCATCGTTGCCAATGGCCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCATTG 1019 consensus_14308#1 AGAGCATCGTTGCCAATGGCCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCATAG 151 consensus_14308#2 ------------------------------------------------------------ consensus_14308#0 GCGTGCCGGAACCGCTCTCGGTGTTCGTCGACACTTACGGCACGGGCAAGATCCCTGACA 1079 consensus_14308#1 GCGTGCCGGAACCGCTCTCGGTGTTCGTCGACACTTACGGCACGGGCAAGATCCCTGACA 211 consensus_14308#2 ------------------------------------------------------------ consensus_14308#0 GGGAGATCCTCAGGATTGTCACGGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCA 1139 consensus_14308#1 GGGAGATCCTCAGGATTGTCACGGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCA 271 consensus_14308#2 ------------------------------------------------------------ consensus_14308#0 ACCTCGACCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGCGGCTTACGGGCACT 1199 consensus_14308#1 ACCTCGACCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGCGGCTTACGGGCACT 331 consensus_14308#2 ------------------------------------------------------------ consensus_14308#0 TCGGGAGGGAGGACCCTGACTTCACCTGGGAGGTGGTGAAACCCCTCAAGTGGGAGGAGC 1259 consensus_14308#1 TCGGGAGGGAGGACCCTGACTTCACCTGGGAGGTGGTGAAACCCCTCAAGTGGGAGGAGC 391 consensus_14308#2 ------------------------------------------------------------ consensus_14308#0 CTTCTGCATAAACAAACACTTGCAGCCTCTAAAACTGTTTTGGAAATGTTTCCATTGATT 1319 consensus_14308#1 CCTCTGCATAAACAAACACTTGCAGCCTCTAAAACTGTTTTGGAAATGTTTCCATTGATT 451 consensus_14308#2 ------------------------------------------------------------ consensus_14308#0 TTGGAGATGTTTTTATCTACACTTCAGCCTCTGAACTTAATCAGACCGTCACTACATGTA 1379 consensus_14308#1 TTGGAGATGTTTTTATCTACACTTCAGCCTCTGAACTTAATCAGACCGTCACTACATGTA 511 consensus_14308#2 --------------------------------------------ACCGTCACTACATGTA 16 **************** consensus_14308#0 TCTATTTTCAC---TGCCTTAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTT 1436 consensus_14308#1 TCTATTTTCAC---TGCCTTAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTT 568 consensus_14308#2 TCTATTTTCACGTGCACTTGAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTT 76 *********** * * **************************************** consensus_14308#0 CTTGTGTTAAAGAAGCTTGTGTGGTGAGTGGTGAGGGGATGATGAAACTATAAAGAAACT 1496 consensus_14308#1 CTTGTGTTAAAGAAGCTTGTGTGGTGAGTGGTGAGGGGATGATGAAACTATAAAGAAACT 628 consensus_14308#2 CTTGTGTTAAAGAAGCTTGTGTGGTGAT--GTGAGGGGATGATGAAACTATAAAGAAACT 134 *************************** ****************************** consensus_14308#0 GAAGCCTCTCATTGGTCCTAAAAAAAAAAAAGGA-------------------------- 1530 consensus_14308#1 GAAGCCTCTCATTGGTCCTTGTCTTGTGCGCAGTGCACTTCTGTCCAAAAAAAAAAAAA- 687 consensus_14308#2 GAAGCCTCTCATTGGTCCTTGTCTTGTGCGCAGTGCACTTCTGTCACAAATGGGGTGTCT 194 ******************* * consensus_14308#0 ------------------------------------------ consensus_14308#1 ------------------------------------------ consensus_14308#2 TGCTTGATCTCTGAATAATTAAGCAAGCTCTCTTGCAAAAAA 236 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||