cluster # 14330

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Oryza sativa
cluster # 14330 cluster # 14330 Sequences # 16 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14330#0 length = 996 sequences # 9
consensus_14330#1 length = 513 sequences # 3

consensus_14330#2 length = 447 sequences # 1
consensus_14330#3 length = 228 sequences # 1
consensus_14330#4 length = 120 sequences # 2

consensusID : consensus_14330#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 996
fasta sequence

                              [CAAGAGGCAAGAGGCAAGAGCATCCGTATTAACCAGCCTTTTGAGACTTGAGAGTGTGTGTGACTCGATCCAGCGTAGTTTCAGTTCGTGTGTTGGTGAGTGATTCCAGCCAAGTTTGCGATGGCTTCTCAGCAGGAACGGGCTAGCTACCACGCCGGCGAGACCAAGGCCCGCGCCGAGGAGA-AGACGGGGCGCATGATGGGCACGGCGCAGGAGAAGGCGCGGGAGGCCAAGGACACGGCGTCCGACGCCGCGGGGCGCGCGATGGGCAGGGGACACGGCGCCAAGGAGGCGACCAAGGAGAAGGCGTACGAGACCAAGGACGCGACCAAGGAGAAGGCGTACGAGGCAAAGGACGCGGCCTCCGACGCCACCGGCCGCGCCATGGACAAGGGCCGCGGCGCCGCGGGCGCCACGAGGGACAAGGCGTACGATGCCAAGGACAGGGCGGCTGACACGGCGCAGTCCGCCGCCGACCGCGCCCGCGACGGCGCCGGGCAGACCGGGAGCTACATTGGACAGACCGCCGAGGCCGCCAAGCAGAAAGCGGCCGGCGCCGCGCAGTACGCCAAGGAGACCGCGATCGCCGGCAAGGACAAGACCGGCGCCGTGCTCCAGCAGGCAGGGGAGCAGGTGAAGAGCGTGGCGGTGGGGGCGAAGGACGCGGTGATGTACACGCTCGGGATGTCAGGCGATAACAAGAACAACGCCGCTGCCGGCAAGGACACCAGCACCTACAAGCCTGGAACTGGGAGTGACTACCAGTAATACGGTATAAGAAGCATGTGTCGTCTTTGGCACTGATGCCAAAGTGTACGTGTTGTATCCTCTTTTTTAAGTTTCAGCTCGACTTCGACGTGTTCGGTGTCACACTTTGGTTTTTCAGTTGTGCTCAACTGTTCATGTTTCTGGTTCCATGGAGGGCCAGTGTGGAGGTCAATGTTTAAGCTTTCGTTTTAAAATCTGATAATAAAGTTGGTTAAGACCTGAAAAAAA]

[+] EMBL AK064074             [CAAGAGGCAAGAGGCAAGAGCATCCGTATTAACCAGCCTTTTGAGACTTGAGAGTGTGTGTGACTCGATCCAGCGTAGTTTCAGTTCGTGTGTTGGTGAGTGATTCCAGCCAAGTTTGCGATGGCTTCTCAGCAGGAACGGGCTAGCTACCACGCCGGCGAGACCAAGGCCCGCGCCGAGGAGA AGACGGGGCGCATGATGGGCACGGCGCAGGAGAAGGCGCGGGAGGCCAAGGACACGGCGTCCGACGCCGCGGGGCGCGCGATGGGCAGGGGACACGGCGCCAAGGAGGCGACCAAGGAGAAGGCGTACGAGACCAAGGACGCGACCAAGGAGAAGGCGTACGAGGCAAAGGACGCGGCCTCCGACGCCACCGGCCGCGCCATGGACAAGGGCCGCGGCGCCGCGGGCGCCACGAGGGACAAGGCGTACGATGCCAAGGACAGGGCGGCTGACACGGCGCAGTCCGCCGCCGACCGCGCCCGCGACGGCGCCGGGCAGACCGGGAGCTACATTGGACAGACCGCCGAGGCCGCCAAGCAGAAAGCGGCCGGCGCCGCGCAGTACGCCAAGGAGACCGCGATCGCCGGCAAGGACAAGACCGGCGCCGTGCTCCAGCAGGCAGGGGAGCAGGTGAAGAGCGTGGCGGTGGGGGCGAAGGACGCGGTGATGTACACGCTCGGGATGTCAGGCGATAACAAGAACAACGCCGCTGCCGGCAAGGACACCAGCACCTACAAGCCTGGAACTGGGAGTGACTACCAGTAATACGGTATAAGAAGCATGTGTCGTCTTTGGCACTGATGCCAAAGTGTACGTGTTGTATCCTCTTTTTTAAGTTTCAGCTCGACTTCGACGTGTTCGGTGTCACACTTTGGTTTTTCAGTTGTGCTCAACTGTTCATGTTTCTGGTTCCATGGAGGGCCAGTGTGGAGGTCAATGTTTAAGCTTTCGTTTTAAAATCTGATAATAAAGTTGGTTAAGACC         ]
[+] EMBL AK073837             [  AGAGGCAAGAGGCAAGAGCATCCGTATTAACCAGCCTTTTGAGACTTGAGAGTGTGTGTGACTCGATCCAGCGTAGTTTCAGTTCGTGTGTTGGTGAGTGATTCCAGCCAAGTTTGCGATGGCTTCTCAGCAGGAACGGGCTAGCTACCACGCCGGCGAGACCAAGGCCCACGCCGAGGAGA AGACGGGGCGCATGATGGGCACGGCGCAGGAGAAGGCGCGGGAGGCCAAGGACACGGCGTCCGACGCCGCGGGGCGCGCGATGGGCAGGGGACACGGCGCCAAGGAGGCGACCAAGGAGAAGGCGTACGAGACCAAGGACGCGACCAAGGAGAAGGCGTACGAGGCAAAGGACGCGGCCTCCGACGCCACCGGCCGCGCCATGGACAAGGGCCGCGGCGCCGCGGGCGCCACGAGGGACAAGGCGTACGATGCCAAGGACAGGGCGGCTGACACGGCGCAGTCCGCCGCCGACCGCGCCCGCGACGGCGCCGGGCAGACCGGGAGCTACATTGGACAGACCGCCGAGGCCGCCAAGCAGAAAGCGGCCGGCGCCGCGCAGTACGCCAAGGAGACCGCGATCGCCGGCAAGGACAAGACCGGCGCCGTGCTCCAGCAGGCAGGGGAGCAGGTGAAGAGCGTGGCGGTGGGGGCGAAGGACGCGGTGATGTACACGCTCGGGATGTCAGGCGATAACAAGAACAACGCCGCTGCCGGCAAGGACACCAGCACCTACAAGCCTGGAACTGGGAGTGACTACCAGTAATACGGTATAAGAAGCATGTGTCGTCTTTGGCACTGATGCCAAAGTGTACGTGTTGTATCCTCTTTTTTAAGTTTCAGCTCGACTTCGACGTGTTCGGTGTCACACTTTGGTTTTTCAGTTGTGCTCAACTGTTCATGTTTCTGGTTCCATGGAGGGCCAGTGTGGAGGTCAATGTTTAAGCTTTCGTTTTAAAATCTGATAATAAAGTTGG                 ]
[+] EMBL OSPMS1               [                 GAGCATCCGTATTAACCAGCCTTTTGAGACTTGAGAGTGTGTGTGACTCGATCCAGCGTAGTTTCAGTTCGTGTGTTGGTGAGTGATTCCAGCCAAGTTTGCGATGGCTTCTCAGCAGGAACGGGCTAGCTACCACGCCGGCGAGACCAAGGCCCGCGCCGAGGAGA AGACGGGGCGCATGATGGGCACGGCGCAGGAGAAGGCGCGGGAGGCCAAGGACACGGCGTCCGACGCCGCGGGGCGCGCGATGGGCAGGGGACACGGCGCCAAGGAGGCGACCAAGGAGAAGGCGTACGAGACCAAGGACGCGACCAAGGAGAAGGCGTACGAGGCAAAGGACGCGGCCTCCGACGCCACCGGCCGCGCCATGGACAAGGGCC   GCGCCGCGGGCGCCACGAGGGACAAGGCGTACGATGCCAAGGACAGGGCGGCTGACACGGCGCAGTCCGCCGCCGACCGCGCCCGCGACGGCGCCGGGCAGACCGGGAGCTACATTGGACAGACCGCCGAGGCCGCCAAGCAGAAAGCGGCCGGCGCCGCGCAGTACGCCAAGGAGACCGCGATCGCCGGCAAGGACAAGACCGGCGCCGTGCTCCAGCAGGCAGGGGAGCAGGTGAAGAGCGTGGCGGTGGGGGCGAAGGACGCGGTGATGTACACGCTCGGGATGTCAGGCGATAACAAGAACAACGCCGCTGCCGGCAAGGACACCAGCACCTACAAGCCTGGAACTGGGAGTGACTACCAGTAATACGGTAGAAGAAGCATGTGTCGTCTTTGGCACTGATGCCAAAGTGTACGTGTTGTATCCTCTTTTTTAAGTTTCAGCTCGACTTCGACGTGTTCGGTGTCACACTTTGGTTTTTCAGTTGTGCTCAACTGTTCATGTTTCTGGTTCCATGGAGGGCCAGTGTGGAGGTCAATGTTTAAGCTTTCGTTTTAAAATCTGATAATAAAGTTGG                 ]
[+] EMBL AU174486             [                   GCATCCGTATTAACCAGCCTTTTGAGACTTGAGAGTGTGTGTGACTCGATCCAGCGTAGTTTCAGTTCGTGTGTTGGTGAGTGATTCCAGCCAAGTTTGCGATGGCTTCTCAGCAGGAACGGGCTAGCTACCACGCCGGCGAGACCAAGGCCCGCGCCGAGGAGA AGACGGGGCGCATGATGGGCACGGCGCAGGAGAAGGCGCGGGAGGCCAAGGACACGGCGTCCGACGCCGCGGGGCGCGCGATGGGCAGGGGACACGGCGCCAAGGAGGCGACCAAGGAGAAGGCGTACGAGACCAAGGACGCGACCAAGGAGAAGGCGTACGAGGCAAAGGACGCGGCCTCCGACGCCACCGGCCGCGCCATGGACAAGGGCCGCGGCGCCGCGGGCGCCACGAGGGACAAGGCGTACGATGCCAAGGACAGGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CF303415             [                       ggGTATTAACCAGCCTTTTGAGACTTGAGAGTGTGTGTGACTCGATCCAGCGTAGTTTCAGTTCGTGTGTTGGTGAGTGATTCCAGCCAAGTTTGCGATGGCTTCTCAGCAGGAACGGGCTAGCTACCACGCCGGCTTTTTCAAGGCCCGCGCCGAGGAGA AGACGGGGCGCATGATGGGCTCTGCGCAGGAGAAGGCGCGGGAGGCCAAGGACACGGCGTCCGACGCCGCGGGGCGCGCGATGGGCAGGGGACACGGCGCCAAGGAGGCGACCAAGGAGAAGGCGTACGAGACCAAGGACGCGACCAAGGAGAAGGCGTACGAGGCAAAGGACGCGGCCTCCGACGCCACCGGCCGCGCCATGGACAAGGGCCGCGGCGCCGCGGGCGCCACGAGGGACAAGGCGTACGATGCCAAGGACAGGGCGGCTGACACGGTGCAGTCCGTCGCCGACCGCGCCCGCGACGGCGCCGGGCAGACCGGGAGCTACATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL C74157               [                          TATTAACCAGCCTTTTGAGACTTGAGAGTGTGTGTGACTCGATCCAGCGTAGTTTCAGTTCGTGTGTTGGTGAGTGATTCCAGCCAAGTTTGCGATGGCTTCTCAGCAGGAACGGGCTAGCTACCACGCCGGCGAGACCAAGGCCCGCGCCGAGGAGA AGACGGGGNGCATGATGGGCACGGNGNAGGAGAAGGCGCGGGAGGCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU068534             [                              AACCAGCCTTTTGAGACTTGAGAGTGTGTGTGACTCGATCCAGCGTAGTTTCAGTTCGTGTGTTGGTGAGTNATTNNAGCCAAGTTTGCGATGGNTTTNNAGCAGGAACGGGCTAGNTACCACGCCGGCGAGACCAAGGCCCGNGCCGAGGAGA AGACGGGGCGCATGATGGGCACGGCGCAGGAGAAGGCGCGGGAGGNCAAGGACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CA998010             [                                    CCTTTTGAGACTTGAGAGTGTGTGTGACTCGATCCAGCGTAGTTTCAGTTCGTGTGTTGGTGAGTGATTCCAGCCAAGTTTGCGATGGCTTCTCAGCAGGAACGGGCTAGCTACCACGCCGGCGAGACCAAGGCCCGCGCCGAGGATATATACGGGGCGCGTGATGGGCACGGCGCAGGAGAAGGCGCGGGAGGCCAAGGACACGGCGTCCGACGCCGCGGGGCGCGCGATGGGCAGGGGACACGGCGCCAAGGAGGCGACCAAGGAGAAGGCGTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU174487             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CCGGCGCCGCGCAGTACGCCAAGGAGACCGCGATCGCCGGCAAGGACAAGACCGGCGCCGTGCTCCAGCAGGCAGGGGAGCAGGTGAAGAGCGTGGCGGTGGGGGCGAAGGACGCGGTGATGTACACGCTCGGGATGTCAGGCGATAACAAGAACAACGCCGCTGCCGGCAAGGACACCAGCACCTACAAGCCTGGAACTGGGAGTGACTACCAGTAATACGGTATAAGAAGCATGTGTCGTCTTTGGCACTGATGCCAAAGTGTACGTGTTGTATCCTCTTTTTTAAGTTTCAGCTCGACTTCGACGTGTTCGGTGTCACACTTTGGTTTTTCAGTTGTGCTCAACTGTTCATGTTTCTGGTTCCATGGAGGGCCAGTGTGGAGGTCAATGTTTAAGCTTTCGTTTTAAAATCTGATAATAAAGTTGGTTAAGACCTGAAAAAAA]




>consensus_14330#0
CAAGAGGCAAGAGGCAAGAGCATCCGTATTAACCAGCCTTTTGAGACTTGAGAGTGTGTG
TGACTCGATCCAGCGTAGTTTCAGTTCGTGTGTTGGTGAGTGATTCCAGCCAAGTTTGCG
ATGGCTTCTCAGCAGGAACGGGCTAGCTACCACGCCGGCGAGACCAAGGCCCGCGCCGAG
GAGAAGACGGGGCGCATGATGGGCACGGCGCAGGAGAAGGCGCGGGAGGCCAAGGACACG
GCGTCCGACGCCGCGGGGCGCGCGATGGGCAGGGGACACGGCGCCAAGGAGGCGACCAAG
GAGAAGGCGTACGAGACCAAGGACGCGACCAAGGAGAAGGCGTACGAGGCAAAGGACGCG
GCCTCCGACGCCACCGGCCGCGCCATGGACAAGGGCCGCGGCGCCGCGGGCGCCACGAGG
GACAAGGCGTACGATGCCAAGGACAGGGCGGCTGACACGGCGCAGTCCGCCGCCGACCGC
GCCCGCGACGGCGCCGGGCAGACCGGGAGCTACATTGGACAGACCGCCGAGGCCGCCAAG
CAGAAAGCGGCCGGCGCCGCGCAGTACGCCAAGGAGACCGCGATCGCCGGCAAGGACAAG
ACCGGCGCCGTGCTCCAGCAGGCAGGGGAGCAGGTGAAGAGCGTGGCGGTGGGGGCGAAG
GACGCGGTGATGTACACGCTCGGGATGTCAGGCGATAACAAGAACAACGCCGCTGCCGGC
AAGGACACCAGCACCTACAAGCCTGGAACTGGGAGTGACTACCAGTAATACGGTATAAGA
AGCATGTGTCGTCTTTGGCACTGATGCCAAAGTGTACGTGTTGTATCCTCTTTTTTAAGT
TTCAGCTCGACTTCGACGTGTTCGGTGTCACACTTTGGTTTTTCAGTTGTGCTCAACTGT
TCATGTTTCTGGTTCCATGGAGGGCCAGTGTGGAGGTCAATGTTTAAGCTTTCGTTTTAA
AATCTGATAATAAAGTTGGTTAAGACCTGAAAAAAA

consensusID : consensus_14330#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 513
fasta sequence

                              [CATGGACTGAGGAGTAGAAAACAAGGCAAGAGGCAAGAGGCAAGAGCATCCGTATTAACCAGCCTTTTGAGACTTGAGAGTGTGTGTGACTCGATCCAGCGTAGTTTCAGTTCGTGTGTTGGTGAGTGATTCCAGCCAAGTTTGGATCCGCCCGAAGCTTGATCCTCCTAGTTGTACGAAAGCTTGAGTAATGGGGTCTAGATTAAACTTCAAGAGCTTTGTTGATGGTGTGAGTGAGCAGCAGCCAACGGTGGGGACTAGTCTTCCATTGACTAGGCAGAACTCTGTGTTCTCGTTAACCTTTGATGAGTTTCAGAACTCATGGGGTGGTGGAATTGGGAAAGATTTTGGGTCTATGAACATGGATGAGCTCTTGAAGAACATTTGGACTGCAGAGGAAAGTCATTCAATGATGGGAAACAATACCAGTTACACCAACATCAGCAATGGTAATAGTGGAAACACTGTTATTAACGGCGGTGGTAACAACATTGGTGGGTTAGCTGTTGGTGT]

[+] EMBL CF312391             [CATGGACTGAGGAGTAGAAAACAAGGCAAGAGGCAAGAGGCAAGAGCATCCGTATTAACCAGCCTTTTGAGACTTGAGAGTGTGTGTGACTCGATCCAGCGTAGTTTCAGTTCGTGTGTTGGTGAGTGATTCCAGCCAAGTTTGGATCCGCCCGAAGCTTGATCCTCCTAGTTGTACGAAAGCTTGAGTAATGGGGTCTAGATTAAACTTCAAGAGCTTTGTTGATGGTGTGAGTGAGCAGCAGCCAACGGTGGGGACTAGTCTTCCATTGACTAGGCAGAACTCTGTGTTCTCGTTAACCTTTGATGAGTTTCAGAACTCATGGGGTGGTGGAATTGGGAAAGATTTTGGGTCTATGAACATGGATGAGCTCTTGAAGAACATTTGGACTGCAGAGGAAAGTCATTCAATGATGGGAAACAATACCAGTTACACCAACATCAGCAATGGTAATAGTGGAAACACTGTTATTAACGGCGGTGGTAACAACATTGGTGGGTTAGCTGTTGG   ]
[+] EMBL CF311705             [       gaAGGAGTAGAAA       AAGAGGCAAGAGGCAAGAGCATCCGTATTAACCAGCCTTTTGAGACTTGAGAGTGTGTGTGACTCGATCCAGCGTAGTTTCAGTTCGTGTGTTGGTGAGTGATTCCAGCCAAGTTTGGATCCGCCCGAAGCTTGATCCTCCTAGTTGTACGAAAGCTTGAGTAATGGGGTCTAGATTAAACTTCAAGAGCTTTGTTGATGGTGTGAGTGAGCAGCAGCCAACGGTGGGGACTAGTCTTCCATTGACTAGGCAGAACTCTGTGTTCTCGTTAACCTTTGATGAGTTTCAGAACTCATGGGGTGGTGGAATTGGGAAAGATTTTGGGTCTATGAACATGGATGAGCTCTTGAAGAACATTTGGACTGCAGAGGAAAGTCATTCAATGATGGGAAACAATACCAGTTACACCAACATCAGCAATGGTAATAGTGGAAACACTGTTATTAACGGCGGTGGTAACAACATTGGTGGGTTAGCTGT      ]
[+] EMBL CF310846             [                            AGAGGCAAGAGGCAAGAGCATCCGTATTAACCAGCCTTTTGAGACTTGAGAGTGTGTGCGACTCGATCCAGCGTAGTTTCAGTTCGTGTGTCGGTGAGTGATTCCAGCCAAGTTTGGATCCGCCCGAAGCTTGATCCTCCTAGTTGTACGAAAGCTTGAGTAATGGGGTCTAGATTAAACTTCAAGAGCTTTGTTGATGGTGTGAGTGAGCAGCAGCCAACGGTGGGGACTAGTCTTCCATTGACTAGGCAGAACTCTGTGTTCTCGTTAACCTTTGATGAGTTTCAGAACTCATGGGGTGGTGGAATTGGGAAAGATTTTGGGTCTATGAACATGGATGAGCTCTTGAAGAACATTTGGACTGCAGAGGAAAGTCATTCAATGATGGGAAACAATACCAGTTACACCAACATCAGCAATGGTAATAGTGGAAACACTGTTATTAACGGCGGTGGTAACAACATTGGTGGGTTAGCTGTTGGTGT]




>consensus_14330#1
CATGGACTGAGGAGTAGAAAACAAGGCAAGAGGCAAGAGGCAAGAGCATCCGTATTAACC
AGCCTTTTGAGACTTGAGAGTGTGTGTGACTCGATCCAGCGTAGTTTCAGTTCGTGTGTT
GGTGAGTGATTCCAGCCAAGTTTGGATCCGCCCGAAGCTTGATCCTCCTAGTTGTACGAA
AGCTTGAGTAATGGGGTCTAGATTAAACTTCAAGAGCTTTGTTGATGGTGTGAGTGAGCA
GCAGCCAACGGTGGGGACTAGTCTTCCATTGACTAGGCAGAACTCTGTGTTCTCGTTAAC
CTTTGATGAGTTTCAGAACTCATGGGGTGGTGGAATTGGGAAAGATTTTGGGTCTATGAA
CATGGATGAGCTCTTGAAGAACATTTGGACTGCAGAGGAAAGTCATTCAATGATGGGAAA
CAATACCAGTTACACCAACATCAGCAATGGTAATAGTGGAAACACTGTTATTAACGGCGG
TGGTAACAACATTGGTGGGTTAGCTGTTGGTGT

consensusID : consensus_14330#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 447
fasta sequence

                              [ACATTGGACAGACCGCCGAGGCCGCCAAGCAGAAAGCGGCCGGCGCCGCGCAGTACGCCAAGGAGACCGCGATCGCCGGCAAGGACAAGACCGGCGCCGTGCTCCAGCAGGTTCATTAGCACTCGCAGATCGTGTTCTTTTTCTAACCATTCTATTTTGTTAAACATTCATGCTAATTGCTGCAAAAAAACGCTCTCTTGGTGTGCAGGCAGGGGAGCAGGTGAAGAGCGTGGCGGTGGGGGCGAAGGACGCGGTGATGTACACGCTCGGGATGTCAGGCGATAACAAGAACAACGCCGCTGCCGGCAAGGACACCAGCACCTACAAGCCTGGAACTGGGAGTGACTACCAGTAATACGGTATAAGAAGCATGTGTCGTCTTTGGCACTGATGCCAAAGTGTACGTGTTGTATCCTCTTTTTTAAGTTTCAGCTCGACTTCGACGTG]

[+] EMBL CF304403             [ACATTGGACAGACCGCCGAGGCCGCCAAGCAGAAAGCGGCCGGCGCCGCGCAGTACGCCAAGGAGACCGCGATCGCCGGCAAGGACAAGACCGGCGCCGTGCTCCAGCAGGTTCATTAGCACTCGCAGATCGTGTTCTTTTTCTAACCATTCTATTTTGTTAAACATTCATGCTAATTGCTGCAAAAAAACGCTCTCTTGGTGTGCAGGCAGGGGAGCAGGTGAAGAGCGTGGCGGTGGGGGCGAAGGACGCGGTGATGTACACGCTCGGGATGTCAGGCGATAACAAGAACAACGCCGCTGCCGGCAAGGACACCAGCACCTACAAGCCTGGAACTGGGAGTGACTACCAGTAATACGGTATAAGAAGCATGTGTCGTCTTTGGCACTGATGCCAAAGTGTACGTGTTGTATCCTCTTTTTTAAGTTTCAGCTCGACTTCGACGTG]




>consensus_14330#2
ACATTGGACAGACCGCCGAGGCCGCCAAGCAGAAAGCGGCCGGCGCCGCGCAGTACGCCA
AGGAGACCGCGATCGCCGGCAAGGACAAGACCGGCGCCGTGCTCCAGCAGGTTCATTAGC
ACTCGCAGATCGTGTTCTTTTTCTAACCATTCTATTTTGTTAAACATTCATGCTAATTGC
TGCAAAAAAACGCTCTCTTGGTGTGCAGGCAGGGGAGCAGGTGAAGAGCGTGGCGGTGGG
GGCGAAGGACGCGGTGATGTACACGCTCGGGATGTCAGGCGATAACAAGAACAACGCCGC
TGCCGGCAAGGACACCAGCACCTACAAGCCTGGAACTGGGAGTGACTACCAGTAATACGG
TATAAGAAGCATGTGTCGTCTTTGGCACTGATGCCAAAGTGTACGTGTTGTATCCTCTTT
TTTAAGTTTCAGCTCGACTTCGACGTG

consensusID : consensus_14330#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 228
fasta sequence

                              [TGACTGGACTGAAGAGTAGAAAGTGTTTCACTTTGGTTTTTCAGTTGTGCTCAACTGTTCATGTTTCTGGTTCCATGGAGGGCCAGTGTGGAGGTCAATGTTTAAGCTTTCGTTTTAAAATCTGATAATAAAGTTGGTTAAGACCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF316457             [TGACTGGACTGAAGAGTAGAAAGTGTTTCACTTTGGTTTTTCAGTTGTGCTCAACTGTTCATGTTTCTGGTTCCATGGAGGGCCAGTGTGGAGGTCAATGTTTAAGCTTTCGTTTTAAAATCTGATAATAAAGTTGGTTAAGACCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_14330#3
TGACTGGACTGAAGAGTAGAAAGTGTTTCACTTTGGTTTTTCAGTTGTGCTCAACTGTTC
ATGTTTCTGGTTCCATGGAGGGCCAGTGTGGAGGTCAATGTTTAAGCTTTCGTTTTAAAA
TCTGATAATAAAGTTGGTTAAGACCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_14330#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 120
fasta sequence

                              [GGAGTAGAAATGTGCTCAACTGTTCATGTTTCTGGTTCCATGGAGGGCCAGTGTGGAGGTCAATGTTTAAGCTTTCGTTTTAAAATCTGATAATAAAGTTGGTTAAGACCTGAAAGAAAA]

[+] EMBL CF322176             [GGAGTAGAAATGTGCTCAACTGTTCATGTTTCTGGTTCCATGGAGGGCCAGTGTGGAGGTCAATGTTTAAGCTTTCGTTTTAAAATCTGATAATAAAGTTGGTTAAGACCTGAAAGAAA ]
[-] EMBL CF322175             [                   CTGTTCATGTTTCTGGTTCCATGGAGGGCCAGTGTGGAGGTCAATGTTTAAGCTTTCGTTTTAAAATCTGATAATAAAGTTGGTTAAGACCTGAAAGAAAA]




>consensus_14330#4
GGAGTAGAAATGTGCTCAACTGTTCATGTTTCTGGTTCCATGGAGGGCCAGTGTGGAGGT
CAATGTTTAAGCTTTCGTTTTAAAATCTGATAATAAAGTTGGTTAAGACCTGAAAGAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14330#0      CAAGAGGCAAGAGGCAAGAGCATCCGTATTAACCAGCCTTTTGAGACTTGAGAGTGTGTG 60
consensus_14330#2      ------------------------------------------------------------
consensus_14330#3      ------------------------------------------------------------
consensus_14330#4      ------------------------------------------------------------
consensus_14330#1      ------------------------------------------------------------
                                                                                   

consensus_14330#0      TGACTCGATCCAGCGTAGTTTCAGTTCGTGTGTTGGTGAGTGATTCCAGCCAAGTTTGCG 120
consensus_14330#2      ------------------------------------------------------------
consensus_14330#3      ------------------------------------------------------------
consensus_14330#4      ------------------------------------------------------------
consensus_14330#1      ------------------------------------------------------------
                                                                                   

consensus_14330#0      ATGGCTTCTCAGCAGGAACGGGCTAGCTACCACGCCGGCGAGACCAAGGCCCGCGCCGAG 180
consensus_14330#2      ------------------------------------------------------------
consensus_14330#3      ------------------------------------------------------------
consensus_14330#4      ------------------------------------------------------------
consensus_14330#1      ------------------------------------------------------------
                                                                                   

consensus_14330#0      GAGAAGACGGGGCGCATGATGGGCACGGCGCAGGAGAAGGCGCGGGAGGCCAAGGACACG 240
consensus_14330#2      ------------------------------------------------------------
consensus_14330#3      ------------------------------------------------------------
consensus_14330#4      ------------------------------------------------------------
consensus_14330#1      ------------------------------------------------------------
                                                                                   

consensus_14330#0      GCGTCCGACGCCGCGGGGCGCGCGATGGGCAGGGGACACGGCGCCAAGGAGGCGACCAAG 300
consensus_14330#2      ------------------------------------------------------------
consensus_14330#3      ------------------------------------------------------------
consensus_14330#4      ------------------------------------------------------------
consensus_14330#1      ------------------------------------------------------------
                                                                                   

consensus_14330#0      GAGAAGGCGTACGAGACCAAGGACGCGACCAAGGAGAAGGCGTACGAGGCAAAGGACGCG 360
consensus_14330#2      ------------------------------------------------------------
consensus_14330#3      ------------------------------------------------------------
consensus_14330#4      ------------------------------------------------------------
consensus_14330#1      ------------------------------------------------------------
                                                                                   

consensus_14330#0      GCCTCCGACGCCACCGGCCGCGCCATGGACAAGGGCCGCGGCGCCGCGGGCGCCACGAGG 420
consensus_14330#2      ------------------------------------------------------ACATTG 6
consensus_14330#3      ------------------------------------------------------------
consensus_14330#4      ------------------------------------------------------------
consensus_14330#1      ---------------------------------------CATGGACTGAGGAGTAGAAAA 21
                                                                                   

consensus_14330#0      GACAAGGCGT--ACGATGCCAAGGACAGGGCGGCTGACACGGCGCAGTCCGCCGCCGACC 478
consensus_14330#2      GACAGACCGCCGAGGCCGCCAAGCAGAAAGCGGCCGGCGCCGCGCAGTACGCCAAGGAGA 66
consensus_14330#3      ------------------------------------------------------------
consensus_14330#4      ------------------------------------------------------------
consensus_14330#1      CAAGGCAAGAGGCAAGAGGCAAGAGCATCCGTATTAACCAGCCTTTTGAGACTTGAGAGT 81
                                                                                   

consensus_14330#0      GCGCCCGCGACGGCGCCGGGCAGACCGGGAGC-TACATTGGACAGAC-CGCCGAGGCCGC 536
consensus_14330#2      CCGCGATCGCCGGCAAGGACAAGACCGGCGCCGTGCTCCAGCAGGTT-CATTAGCACTCG 125
consensus_14330#3      ----------------TGACTGGACTGAAGA---GTAGAAAGTGTTT-CACTTTGGTTTT 40
consensus_14330#4      -------------------------------------------------------GGAGT 5
consensus_14330#1      GTGTGTGACTCGATCCAGCGTAGTTTCAGTTCGTGTGTTGGTGAGTGATTCCAGCCAAGT 141
                                                                                   

consensus_14330#0      CAAGCAGAAAGCGGCCGGCG-CCGCGCAGTACGCCAAGGAGACCGCGATCGCCGGCAAGG 595
consensus_14330#2      CAGATCGTGTTCTTTTTCTAACCATTCTATTTTGTTAAACATTCATGCTAATTGCT--GC 183
consensus_14330#3      TCAGTTGTGCTCAACTGTTCATGTTTCTGGTTCCATGGAGGGCCAGTGTGGAGGTCAATG 100
consensus_14330#4      AGAAATGTGCTCAACTGTTCATGTTTCTGGTTCCATGGAGGGCCAGTGTGGAGGTCAATG 65
consensus_14330#1      TTGGATCCGCCCGAAGCTTGATCCTCCTAGTTGTACGAAAGCTTGAGTAATGGGGTCTAG 201
                                  *              *                          *      

consensus_14330#0      ACAAGACCGGC---GCCGTGCTCCAGCAGGCAGGGG--AGCAGGTGAAGAGCGTGGCGGT 650
consensus_14330#2      AAAAAAACGCT---CTCTTGGTGT-GCAGGCAGGGG--AGCAGGTGAAGAGCGTGGCGGT 237
consensus_14330#3      TTTAAGCTTTC---GTTTTAAAAT--CTGATAATAA--AGTTGGTTAAGACCTGAAAAAA 153
consensus_14330#4      TTTAAGCTTTC---GTTTTAAAAT--CTGATAATAA--AGTTGGTTAAGACCTGAAAGAA 118
consensus_14330#1      ATTAAACTTCAAGAGCTTTGTTGATGGTGTGAGTGAGCAGCAGCCAACGGTGGGGACTAG 261
                          *              *         *  *      **  *   * *           

consensus_14330#0      GGGGGCGAAGGACGCGGTGATGTACACGCTCGGGATGTCAGGCGATAACAAGAACAACGC 710
consensus_14330#2      GGGGGCGAAGGACGCGGTGATGTACACGCTCGGGATGTCAGGCGATAACAAGAACAACGC 297
consensus_14330#3      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAAAAAAAAAAAAAA 213
consensus_14330#4      AA---------------------------------------------------------- 120
consensus_14330#1      TCTTCCATTGACTAGGCAGAACTCTGTGTTCTCGTTAACCTTTGATGAGTTTCAGAACTC 321
                                                                                   

consensus_14330#0      CGCTGCCGGCAAGGACACCAGCACCTACAAGCCTGGAACTGGGAGTGACTACCAGTAATA 770
consensus_14330#2      CGCTGCCGGCAAGGACACCAGCACCTACAAGCCTGGAACTGGGAGTGACTACCAGTAATA 357
consensus_14330#3      AAAAAAAAAAAAAAA--------------------------------------------- 228
consensus_14330#4      ------------------------------------------------------------
consensus_14330#1      ATGGGGTGGTGGAATTGGGAAAGATTTTGGGTCTATGAACATGGATGAGCTCTTGAAGAA 381
                                                                                   

consensus_14330#0      CGGTATAAGAAGCATGTGTCGTCTTTGGCACTGATGCCAAAGTGTACGTGTTGTATCCTC 830
consensus_14330#2      CGGTATAAGAAGCATGTGTCGTCTTTGGCACTGATGCCAAAGTGTACGTGTTGTATCCTC 417
consensus_14330#3      ------------------------------------------------------------
consensus_14330#4      ------------------------------------------------------------
consensus_14330#1      CATTTGGACTGCAGAGGAAAGTCATT--CAATGATGGGAAACAATACCAGTTACACCAAC 439
                                                                                   

consensus_14330#0      TTTTTTAAGTTTCAGCTCGACTTCGACGTGTTCGGTGTCACACTTTGGTTTTTCAGTTGT 890
consensus_14330#2      TTTTTTAAGTTTCAGCTCGACTTCGACGTG------------------------------ 447
consensus_14330#3      ------------------------------------------------------------
consensus_14330#4      ------------------------------------------------------------
consensus_14330#1      ATCAGCAATGGTAATAGTGGAAACACTGTTATTAACGGCGGTGGTAACAACATTGGTGGG 499
                                                                                   

consensus_14330#0      GCTCAACTGTTCATGTTTCTGGTTCCATGGAGGGCCAGTGTGGAGGTCAATGTTTAAGCT 950
consensus_14330#2      ------------------------------------------------------------
consensus_14330#3      ------------------------------------------------------------
consensus_14330#4      ------------------------------------------------------------
consensus_14330#1      TTAGCTGTTGGTGT---------------------------------------------- 513
                                                                                   

consensus_14330#0      TTCGTTTTAAAATCTGATAATAAAGTTGGTTAAGACCTGAAAAAAA 996
consensus_14330#2      ----------------------------------------------
consensus_14330#3      ----------------------------------------------
consensus_14330#4      ----------------------------------------------
consensus_14330#1      ----------------------------------------------