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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14333#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1731 fasta sequence
[GAACCAAAATCCGTAGGTCGTATCGTAGGGAGGGCCTGCGCCGATCCCCATCCGTCCCGCGACTCGAACTCGAGCGAGCAGAGGCGGCGCCGGCGCTCGTCCTGCCGCCACCGCCGCGGCCGCCTGAGCCGATCCCATCCATCCCGCGAGCGAGCGAGCGCTTCCGCCGCATCCTGGTCCTGGATCAGGTAGAAGGAGATGGCGACTCTTGGTCTTGCCCCAAACATGAATCCAAACAAGTCATTTGAGGTACTGCCTAATCCAGGTGACTCCGTATCGAGCCTCAGTTTTAGCCCAAAGAGCAACCTTCTGGTGGCAACTTCCTGGGATAACCAGGTGCGGTGCTGGGAGATTGTTGGTGGGAGTAGTCAACCAAAGGCATCTATATCGCATGACCAGCCAGTCCTCTGTTCAGCTTGGAAGGATGATGGAACTACTGTGTTCTCTGGAGGCTGTGATAAACAAGTAAAAATGTGGCCTCTGTTGTCTGGTGGGCAGGCTCAGACTGTTGCAATGCATGACGCACCTGTCAAGGAGATCGCTTGGATTCCTCAAATGAATCTTCTTGTCTCT-GGAAGCTGGGATAAGACTCTAAGGTATTGGGACACAAGGCAATCAAATCCTGTCCATGTTCAGCAACTTCCTGAGCGCTGTTACGCACTTACAGTGAATTATCCCCTTATGATTGTGGGAACTGCTGATCGTAATCTGGTCGTCTTCAACTTGCAGAATCCTCAGACGGAGTTCAAGCGCATCCAATCGCCACTCAAATACCAGACTA-GGTGTCTTGCTGCATTCCCGGATCAACAAGGATTTTTGGTGGGTTCCATAGAAGGAAGAGTTGGTGTGCATCATATTGATGACTCACAGCAAAGCAAAAATTTCACGTTCAAATGTCACAGGGAAGGGAATGATATTTTCTCTGTCAATTCACTCAATTTTCACCCAGTTCATCACACGTTTGCAACTGCTGGATCAGATGGCGCATTTAATTTCTGGGATAAGGATAGCAAACAAAGACTGAAGGCTTTTAGTCGGTGCCCTCTTCCTATTCCTTGCAGTACCTTCAACAGTGATGGGTCGATATTTGCTTATGCAGTCTGCTATGACTGGAGCCGTGGGGCTGAAAACCACAACCCTGCCACTGCAAAGACATCCATCTATCTTCACAGTCCACAGGAATCTGAGGTTAAAGGGAAGCCGAGAATCGCAACAAGTAGAAAGTGATTACATCCAGCTACGCAAAACCAAAGAGTGCACAAGAAATCATGTACATTGGAAGACAAAAACGTTTCTCCAGGACCTCTGTCCATCGTGTAGGATGCTTTTCTCTTGGTTGGTCATCAATTTTGTTGTGTCCAGTCTGGTGTTAGCATCTGGTAGATGTAAATGTCAGTCTACTCGTAGTCACTGAAGATAGGGGGTTTAGTCGCAGGTTTTAGCATGCATCAGTTTGCAGTGTCTAGTTCTATTTAAGTTATGTTTACCAAGTTTATGCGAGTCTTATGTTGTCGATATAATCAGATCAGCCCGAACCGTTTCTAAGGGAGGTGTTGCAAGTGATGTAAATTATTGCAAATGTAGATTCATATTTCGTTAGAATTATCGCCACGTTCTGAGATGTACTAAATTTACCCGTGAGAAACCAGTGGATGCTGACTTTCTGGTTTTGGCCCGTGAATCTGAATGGCCTACTTGAATTTGAAATGGTAGCTGTCTGAAAAATACGAT]
[+] EMBL AK111670 [GAACCAAAATCCGTAGGTCGTATCGTAGGGAGGGCCTGCGCCGATCCCCATCCGTCCCGCGACTCGAACTCGAGCGAGCAGAGGCGGCGCCGGCGCTCGTCCTGCCGCCACCGCCGCGGCCGCCTGAGCCGATCCCATCCATCCCGCGAGCGAGCGAGCGCTTCCGCCGCATCCTGGTCCTGGATCAGGTAGAAGGAGATGGCGACTCTTGGTCTTGCCCCAAACATGAATCCAAACAAGTCATTTGAGGTACTGCCTAATCCAGGTGACTCCGTATCGAGCCTCAGTTTTAGCCCAAAGAGCAACCTTCTGGTGGCAACTTCCTGGGATAACCAGGTGCGGTGCTGGGAGATTGTTGGTGGGAGTAGTCAACCAAAGGCATCTATATCGCATGACCAGCCAGTCCTCTGTTCAGCTTGGAAGGATGATGGAACTACTGTGTTCTCTGGAGGCTGTGATAAACAAGTAAAAATGTGGCCTCTGTTGTCTGGTGGGCAGGCTCAGACTGTTGCAATGCATGACGCACCTGTCAAGGAGATCGCTTGGATTCCTCAAATGAATCTTCTTGTCTCT GGAAGCTGGGATAAGACTCTAAGGTATTGGGACACAAGGCAATCAAATCCTGTCCATGTTCAGCAACTTCCTGAGCGCTGTTACGCACTTACAGTGAATTATCCCCTTATGATTGTGGGAACTGCTGATCGTAATCTGGTCGTCTTCAACTTGCAGAATCCTCAGACGGAGTTCAAGCGCATCCAATCGCCACTCAAATACCAGACTA GGTGTCTTGCTGCATTCCCGGATCAACAAGGATTTTTGGTGGGTTCCATAGAAGGAAGAGTTGGTGTGCATCATATTGATGACTCACAGCAAAGCAAAAATTTCACGTTCAAATGTCACAGGGAAGGGAATGATATTTTCTCTGTCAATTCACTCAATTTTCACCCAGTTCATCACACGTTTGCAACTGCTGGATCAGATGGCGCATTTAATTTCTGGGATAAGGATAGCAAACAAAGACTGAAGGCTTTTAGTCGGTGCCCTCTTCCTATTCCTTGCAGTACCTTCAACAGTGATGGGTCGATATTTGCTTATGCAGTCTGCTATGACTGGAGCCGTGGGGCTGAAAACCACAACCCTGCCACTGCAAAGACATCCATCTATCTTCACAGTCCACAGGAATCTGAGGTTAAAGGGAAGCCGAGAATCGCAACAAGTAGAAAGTGATTACATCCAGCTACGCAAAACCAAAGAGTGCACAAGAAATCATGTACATTGGAAGACAAAAACGTTTCTCCAGGACCTCTGTCCATCGTGTAGGATGCTTTTCTCTTGGTTGGTCATCAATTTTGTTGTGTCCAGTCTGGTGTTAGCATCTGGTAGATGTAAATGTCAGTCTACTCGTAGTCACTGAAGATAGGGGGTTTAGTCGCAGGTTTTAGCATGCATCAGTTTGCAGTGTCTAGTTCTATTTAAGTTATGTTTACCAAGTTTATGCGAGTCTTATGTTGTCGATATAATCAGATCAGCCCGAACCGTTTCTAAGGGAGGTGTTGCAAGTGATGTAAATTATTGCAAATGTAGATTCATATTTCGTTAGAATTATCGCCACGTTCTGAGATGTACTAAATTTACCCGTGAGAAACCAGTGGATGCTGACTTTCTGGTTTTGGCCCGTGAATCTGAATGGCCTACTTGAATTTGAAATGGTAGCTGTCTGAAAAATACGAT]
[+] EMBL CB677575 [ TCCCCATCCGTCCCGCGACTCGAACTCGAGCGAGCAGAGGCGGCGCCGGCGCTCGTCCTGCCGCCACCGCCGCGGCCGCCTGAGCCGATCCCATCCATCCCGCGAGCGAGCGAGCGCTTCCGCCGCATCCTGGTCCTGGATCAGGTAGAAGGAGATGGCGACTCTTGGTCTTGCCCCAAACATGAATCCAAACAAGTCATTTGAGGTACTGCCTAATCCAGGTGACTCCGTATCGAGCCTCAGTTTTAGCCCAAAGAGCAACCTTCTGGTGGCAACTTCCTGGGATAACCAGGTGCGGTGCTGGGAGATTGTTGGTGGGAGTAGTCAACCAAAGGCATCTATATCGCATGACCAGCCAGTCCTCTGTTCAGCTTGGAAGGATGATGGAACTACTGTGTTCTCTGGAGGCTGTGATAAACAAGTAAAAATGTGGCCTCTGTTGTCTGGTGGGCAGGCTCAGACTGTTGCAATGCATGACGCACCTGTCAAGGAGATCGCTTGGATTCCTCAAATGAATCTTCTTGTCTCT GGAAGCTGGGATAAGACTCTAAGGTATTGGGACACAAGGCAATCAAATCCTGTCCATGTTCAGCAACTTCCTGAGCGCTGTTACGCACTTACAGTGAATTATCCCCTTATGATTGTGGGAACTGCTGATCGTAATCTGGTCGTCTTCAACTTGCAGAATCCTCAGACGGAGTTCAAGCGCATCCAATCGCCACTCAAATACCAGACTA NGTGTCT ]
[+] EMBL CA755212 [ GCGAGCAGAGGCGGCGCCGGCGCTCGTCCTGCCGCCACCGCCGCGGCCGCCTGAGCCGATCCCATCCATCCCGCGAGCGAGCGAGCGCTTCCGCCGCATCCTGGTCCTGGATCAGGTAGAAGGAGATGGCGACTCTTGGTCTTGCCCCAAACATGAATCCAAACAAGTCATTTGAGGTACTGCCTAATCCAGGTGACTCCGTATCGAGCCTCAGTTTTAGCCCAAAGAGCAACCTTCTGGTGGCAACTTCCTGGGATAACCAGGTGCGGTGCTGGGAGATTGTTGGTGGGAGTAGTCAACCAAAGGCATCTATATCGCATGACCAGCCAGTCCTCTGTTCAGCTTGGAAGGATGATGGAACTACTGTGTTCTCTGGAGGCTGTGATAAACAAGTAAAAATGTGGCCTCTGTTGTCTGGTGGGCAGGCTCAGACTGTTGCAATGCATGACGCANCTGTCAAGGAGATCGCTTGGATTCCTCANATGAATCTTCTTGTCTCT GGAAGCTGGGATAAGACTCTAAGGTATTGGGACAC AGGCAATCAAATCCTGTCCATGTTCAGCAACTTCCTGAGCGCTGTTACGCACTTACAGTGGATTATCCCCTTA ]
[+] EMBL CF323392 [ TCCCATCCATCCCGCGAGCGAGCGAGCGCTTCCGCCGCATCCTGGTCCTGGATCAGGTAGAAGGAGATGGCGACTCTTGGTCTTGCCCCAAACATGAATCCAAACAAGTCATTTGAGGTACTGCCTAATCCAGGTGACTCCGTATCGAGCCTCAGTTTTAGCCCAAAGAGCAACCTTCTGGTGGCAACTTCCTGGGATAACCAGGTGCGGTGCTGGGAGATTGTTGGTGGGAGTAGTCAACCAAAGGCATCTATATCGCATGACCAGCCAGTCCTCTGTTCAGCTTGGAAGGATGATGGAACTACTGTGTTCTCTGGAGGCTGTGATAAACAAGTAAAAATGTGGCCTCTGTTGTCTGGTGGGCAGGCTCAGACTGTTGCAATGCATGACGCACCTGTCAAGGAGATCGCTTGGATTCCTCAAATGAATCTTCTTGTCTCT GGAAGCTGGGATAAGACTCTAAGGTATTGGGACACAAGGCAATCAAATCCTGTCCATGTTCAGCAACTTCCTGAGCGCTGTTACGCACTTACAGTGAATTATCCCCTTATGATTGTGGGAACTGCTGATCGTAATCTGGTCGTCTTCAACTTGCAGAATCCTCAGACGGAGTTCAAGCGCATCCAATCGCCACTCAAATACCAGACTAGGGTGTCTTGCTGCA ]
[+] EMBL CF322711 [ TCCCATCCATCCCGCGAGCGAGCGAGCGCTTCCGCCGCATCCTGGTCCTGGATCAGGTAGAAGGAGATGGCGACTCTTGGTCTTGCCCCAAACATGAATCCAAACAAGTCATTTGAGGTACTGCCTAATCCAGGTGACTCCGTATCGAGCCTCAGTTTTAGCCCAAAGAGCAACCTTCTGGTGGCAACTTCCTGGGATAACCAGGTGCGGTGCTGGGAGATTGTTGGTGGGAGTAGTCAACCAAAGGCATCTATATCGCATGACCAGCCAGTCCTCTGTTCAGCTTGGAAGGATGATGGAACTACTGTGTTCTCTGGAGGCTGTGATAAACAAGTAAAAATGTGGCCTCTGTTGTCTGGTGGGCAGGCTCAGACTGTTGCAATGCATGACGCACCTGTCAAGGAGATCGCTTGGATTCCTCAAATGAATCTTCTTGTCTCT GGAAGCTGGGATAAGACTCTAAGGTATTGGGACACAAGGCAATCAAATCCTGTCCATGTTCAGCAACTTCCTGAGCGCTGTTACGCACTTAC ]
[+] EMBL AU108860 [ TCCCATCCATCCCGCGAGCNAGCGAGCGCTTCCGCCGCATCCTGGTCCTGGATCAGGTAGAAGGAGATGGCGACTCTTGGTCTTGCCCCAAACATGAATCCAAACAAGTCATTTGAGGTACTGCCTAATCCAGGTGACTCCGTATCGAGCCTCAGTTTTAGCCCAAAGAGCAACCTTCTGGTGGCAACTTCCTGGGATAACCAGGTGCGGTGCTGGGAGATTGTTGGTGGGAGTAGTCAACCAAAGGCANCTATATCGCATGACCAGCCAGTCCTCTGTTCAGCTTGGAAGGATGATGGAACTACTGTGTTCTCTGGAGGCTGTGATAAACAAGTAAAAATGTGGCCTCTGTTGTCTGGTGGGCAGGCTCAGACTGTTGCAATGCATGACGCACCTGTCAAGGAGATCGCTTGGATTCCTCAAATGAATCTTCTTGTCTCTGGGAAGCTGGGATAAGACTCTAAGGTATTGGGACACAAGGCAATCAAATCCTGTCCATGTTCAGCAACTTCCTGAGCGCTGTT ]
[-] EMBL OS38033 [ tCAATCGCCACTCAAATACCAGACTA GGTGTCTTGCTGCA TCCCGGATCAACAAGGA TTTTGGTGGGTCCCATAGAAGGAAGAGTTGGTGTGCATCATATTGATGACTCACAGCAAAGCAAAAATTTCACGTTCAAATGTCACAGGGAAGGGAATGATATTTTCTCTGTGAAGMCACTCAATTGGCNNCCAGTTCATCACACGTTTGCAA ]
[-] EMBL CF328547 [ CATCCATCTATCTTCACAGTCCACAGGAATCTGAGGTTAAAGGGAAGCCGAGAATCGCAACAAGTAGAAAGTGATTACATCCAGCTACGCAAAACCAAAGAGTGCACAAGAAATCATGTACATTGGAAGACAAAAACGTTTCTCCAGGACCTCTGTCCATCGTGTAGGATGCTTTTCTCTTGGTTGGTCATCAATTTTGTTGTGTCCAGTCTGGTGTTAGCATCTGGTAGATGTAAATGTCAGTCTACTCGTAGTCACTGAAGATAGGGGGTTTAGTCGCAGGTTTTAGCATGCATCAGTTTGCAGTGTCTAGTTCTATTTAAGTTATGTTTACCAAGTTTATGCGAGTCTTATGTTGTCGATATAATCAGATCAGCCCGAACCGTTTCTAAGGGAGGTGTTGCAAGTGATGTAAATTATTGCAAATGTAGATTCATATTTCGTTAGAATTATCGCCACGTTCTGAGATGTACTAAATTTACCCGTGAGAAACCAGTGGATGCTGACTTTCTGGTTTTGGCCCGTGAATCT ]
consensusID : consensus_14333#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 825 fasta sequence
[GACTCACAGCAAAGCAAAAATTTCACGTTCAAATGTCACAGGGAAGGGAATGATATTTTCTCTGTCAATTCACTCAATTTTCACCCAGTTCATCACACGTTTGCAACTGCTGGATCAGATGGCGCATTTAATTTCTGGGATAAGGATAGCAAACAAAGACTGAAGGCTTTTAGTCGGTGCCCTCTTCCTATTCCTTGCAGTACCTTCAACAGTGATGGGTCGATATTTGCTTATGCAGTCTGCTATGACTGGAGCCGTGGGGCTGAAAACCACAACCCTGCCACTGCAAAGACATCCATCTATCTTCACAGTCCACAGGAATCTGAGGTTAAAGGGAAGCCGAGAATCGCAACAAGTAGAAAGTGATTACATCCAGCTACGCAAAACCAAAGAGTGCACAAGAAATCATGTACATTGGAAGACAAAAACGTTTCTCCAGGACCTCTGTCCATCGTGTAGGATGCTTTTCTCTTGGTTGGTCATCAATTTTGTTGTGTCCAGTCTGGTGTTAGCATCT-GGT-AGATGTAAATGTCAGTCTACTCGTAGTCACTGAAGATAGGGGGTTTAGTCGCAGGTTTTAGCATGCATCAGTTTGCAGTGTCTAGTTCTATTTAAGTTATGTTTACCAAGTTTATGCGAGTCTTATGTTGTCGATATAATCAGATCAGCCCGAACCGTTTCTAAGGGAGGTGTTGCAAGTGATGTAAATTATTGCAAATGTAGATTCATATTTCGTTAGAATTATCGCCACGTTCTGAGATGTACTAAATTTACCCGTGAGAAACCAGTGGATGCTGACTTTCTGGTTTTGGCCAAAAAAAAAGA]
[-] EMBL CB677576 [GACTCACAGCAAAGCAAAAATTTCACGTTCAAATGTCACAGGGAAGGGAATGATATTTTCTCTGTCAATTCACTCAATTTTCACCCAGTTCATCACACGTTTGCAACTGCTGGATCAGATGGCGCATTTAATTTCTGGGATAAGGATAGCAAACAAAGACTGAAGGCTTTTAGTCGGTGCCCTCTTCCTATTCCTTGCAGTACCTTCAACAGTGATGGGTCGATATTTGCTTATGCAGTCTGCTATGACTGGAGCCGTGGGGCTGAAAACCACAACCCTGCCACTGCAAAGACATCCATCTATCTTCACAGTCCACAGGAATCTGAGGTTAAAGGGAAGCCGAGAATCGCAACAAGTAGAAAGTGATTACATCCAGCTACGCAAAACCAAAGAGTGCACAAGAAATCATGTACATTGGAAGACAAAAACGTTTCTCCAGGACCTCTGTCCATCGTGTAGGATGCTTTTCTCTTGGTTGGTCATCAATTTTGTTGTGTCCAGTCTGGTGTTAGCATCT GGT AGATGTAAATGTCAGTCTACTCGTAGTCACTGAAGATAGGGGGTTTAGTCGCAGGTTTTAGCATGCATCAGTTTGCAGTGTCTAGTTCTATTTAAGTTATGTTTACCAAGTTTATGCGAGTCTTATGTTGTCGATATAATCAGATCAGCCCGAACCGTTTCTAAGGGAGGTGTTGCAAGTGATGTAAATTATTGCAAATGTAGATTCATATTTCGTTAGAATTATCGCCACGTTCTGAGATGTACTAAATTTACCCGTGAGAAACCAGTGGATGCTGACTTTCTGGTTTTGGCCAAAAAAAAAGA]
[+] EMBL CF328546 [ GGGAATGATATTTTCTCTGTCAATTCACTCAATTTTCACCCAGTTCATCACACGTTTGCAACTGCTGGATCAGATGGCGCATTTAATTTCTGGGATAAGGATAGCAAACAAAGACTGAAGGCTTTTAGTCGGTGCCCTCTTCCTATTCCTTGCAGTACCTTCAACAGTGATGGGTCGATATTTGCTTATGCAGTCTGCTATGACTGGAGCCGTGGGGCTGAAAACCACAACCCTGCCACTGCAAAGACATCCATCTATCTTCACAGTCCACAGGAATCTGAGGTTAAAGGGAAGCCGAGAATCGCAACAAGTAGAAAGTGATTACATCCAGCTACGCAAAACCAAAGAGTGCACAAGAAATCATGTACATTGGAAGACAAAAACGTTTCTCCAGGACCTCTGTCCATCGTGTAGGATGCTTTTCTCTTGGTTGGTCATCAATTTTGTTGTGTCCAGTCTGGTGTTAGCATCT GGT AGATGTAAATGTCAGTCTACTCGTAGTCACTGAA ATAGGGGGTTTAGTCGCAGGTTTTAGCATGCATCAGTTTGCAGTGTCTAGTTCTATTTAAGTTATGTTTACCAAGTTTATGCGAGTCTTATGTTGTCGATATAATCAGATCAGC ]
[+] EMBL CA998484 [ CCACAGGAATCTGAGGTTAAAGGGAAGCCGAGAATCGCAACAAGTAGAAAGTGATTACATCCAGCTACGCAAAACCAAAGAGTGCACAAGAAATCATGTACATTGGAAGACAAAAACGTTTCTCCAGGACCTCTGTCCATCGTGTAGGATGCTTTTCTCTTGGTTGGTCATCAATTTTGTTGTGTCCAGTCTGGTGTTAGCATCT GGT ACATGTAAATGTCAGCCTACTCGTACTCACTGACGATAGGGGGCTTAG ]
[+] EMBL C97094 [ AGCANCTGGGTAAGATGTAAATGTCAGTCTACTCGTAGTCACTGAAGATAGGGGGTTTAGCCGCAGGTTTTAGCATGCATCAGTTTGCNGTGNCTAGTTCTANTTAAGTTATGTTTACCAAGTTTATGCGAGTCTTATGTTGTCGATATAATCAGATCAGCCCGAACCGTTTCTAAGGGAGGTGTTGCAAGTGATGTAAATTATTGCAAATGTAGATTCATATTTCGTTAGAATTATCGCCACGTTCTNAGATGTACTAAATTTACCCGTNAGAAACCAGTGGATGCTNACTTTtnnaa ]
consensusID : consensus_14333#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 817 fasta sequence
[TCACAGCAAAGCAAAAATTTCACGTTCAAATGTCACAGGGAAGGGAATGATATTTTCTCTGTCAATTCACTCAATTTTCACCCAGTTCATCACACGTTTGCAACTGCTGGATCAGATGGCGCATTTAATTTCTGGGATAAGGATAGCAAACAAAGACTGAAGGCTTTTAGTCGGTGCCCTCTTCCTATTCCTTGCAGTACCTTCAACAGTGATGGGTCGATATTTGCTTATGCAGTCTGCTATGACTGGAGCCGTGGGGCTGAAAACCACAACCCTGCCACTGCAAAGACATCCATCTATCTTCACAGTCCACAGGAATTTGAGGTTAAAGGGAAGCCGAGAATCGCAACAAGTAGAAAGTGATTACATCCAGCTACGCAAAACCAAAGAGTGCACAAGAAATCATGTACATTGGAAGACAAAAACGTTTTTCCAGGACCTCTCTGTCCATCGTGTAGGATGCTTTTCTCTTGGTTGGTCATCAATTTTGTTGTGTCCAGTCTGGTGTTAGCATCTGGTAGATGTAAATGTCAGCCTACTCGTAGTCACTGAAGATAGGGGGTTTAGTCGCAGGTTTTAGCATGCATCAGTTTGCAGTGTCTAGTTCTATTTAAGTTATGTTTACCAAGTTTATGCGAGTCTTATAATCAGATCAGCCCGAACCGTTTTTAAGGGAGGTGTTGCAAGTGATGTAAATTATTGCAAATGTAGATTCATATTTCGATGGAATTATCGCCACGTTCTGAGAAAAAAAAAAATTAAAAAGGAGAAACCCGTGGATGCTGACTTTCTGGTTTTGGCCCGTGAAAAAAAAAAA]
[-] EMBL CB622212 [TCACAGCAAAGCAAAAATTTCACGTTCAAATGTCACAGGGAAGGGAATGATATTTTCTCTGTCAATTCACTCAATTTTCACCCAGTTCATCACACGTTTGCAACTGCTGGATCAGATGGCGCATTTAATTTCTGGGATAAGGATAGCAAACAAAGACTGAAGGCTTTTAGTCGGTGCCCTCTTCCTATTCCTTGCAGTACCTTCAACAGTGATGGGTCGATATTTGCTTATGCAGTCTGCTATGACTGGAGCCGTGGGGCTGAAAACCACAACCCTGCCACTGCAAAGACATCCATCTATCTTCACAGTCCACAGGAATTTGAGGTTAAAGGGAAGCCGAGAATCGCAACAAGTAGAAAGTGATTACATCCAGCTACGCAAAACCAAAGAGTGCACAAGAAATCATGTACATTGGAAGACAAAAACGTTTTTCCAGGACCTCTCTGTCCATCGTGTAGGATGCTTTTCTCTTGGTTGGTCATCAATTTTGTTGTGTCCAGTCTGGTGTTAGCATCTGGTAGATGTAAATGTCAGCCTACTCGTAGTCACTGAAGATAGGGGGTTTAGTCGCAGGTTTTAGCATGCATCAGTTTGCAGTGTCTAGTTCTATTTAAGTTATGTTTACCAAGTTTATGCGAGTCTTATAATCAGATCAGCCCGAACCGTTTTTAAGGGAGGTGTTGCAAGTGATGTAAATTATTGCAAATGTAGATTCATATTTCGATGGAATTATCGCCACGTTCTGAGAAAAAAAAAAATTAAAAAG ]
[+] EMBL BM038641 [ GTGATTACATCCAGCTACGC AAACC AAGAGTGCACAAGAAATCATGTACATTGGAAGACCAAAACGTTTCTCCAGGACCTCTCTGTCCATCGTGTAGGATGCTTTTCTCTTGGTTGGTCATCAATTTTGTTGTGTCCAGTCTGGTGTTAGCATCTGGTAGATGTAAATGTCAGCCTACTCGTAGTCACTGAAGATAGGGGGTTTAGTCGCAGGTTTTAGCATGCATCAGTTTGCAGTGTCTAGTTCTATTTAAGTTATGTTTACCAAGTTTATGCGAGTCTTATAATCAGATCAGCCCGAACCGTTTCTAAGGGAGGTGTTGC AGTGATGTAAATTATTGC AATGTAGATTCATATTTCGTTAGAATTATCGCCACGTTCTGAGATGTACTAAATTTACCCGTGAGAAACCCGTGGATGCTGACTTTCTGGTTTTGGCCCGTGAAAAAAAAAAA]
consensusID : consensus_14333#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 660 fasta sequence
[CCGGAAATCGTCCTGCCGCCTGAGCCGATCCCATCCATGCCGCGAGCGAGCGAGCGCTTCCGCCGCATCCTGGTCCTGGTAGAAGGAGATGGCGACTCTTGGTCTTGCCCCAAACATGAATCCAAACAAGTCATTTGAGGTACTGCCTAATCCAGGTGACTCCGTATCGAGCCTCAGTTTTAGCCCAAAGAGCAACCTTCTGGTGGCAACTTCCTGGGATAACCAGGTGCGGTGCTGGGAGATTGTTGGGGGGAGTAGTCAACCAAAGGCATCTATATCGCATGACCAGCCAGTCCTCTGTTCAGCTTGGAAGGATGATGGAACTACTGTGTTCTCTGGAGGCTGTGATAAACAAGTAAAAATGTGGCCTCTGTTGTCTGGTGGGCAGGCTCAGACTGTTGCAATGCATGACGCACCTGTCAAGGAGATCGCTTGGATTCCTCAAATGAATCTTCTTGTCTCTGGAAGCTGGGATAAGACTCTAAGGTATTGGGACACAAGGCAATCAAATCCTGTCCATGTTCAGCAACTTCCTGAGCGCTGTTACGCACTTACAGTGAATTATCCCCTTATGATTGTGGGAACTGCTGATCGTAATCTGGTCGTCTTCAACTTGCAGAATCCTCAGACGGAGTTCAAGCGCATCCAATCGCCACTCAA]
[+] EMBL CB620891 [CCGGAAATCGTCCTGCCGCCTGAGCCGATCCCATCCATGCCGCGAGCGAGCGAGCGCTTCCGCCGCATCCTGGTCCTGGTAGAAGGAGATGGCGACTCTTGGTCTTGCCCCAAACATGAATCCAAACAAGTCATTTGAGGTACTGCCTAATCCAGGTGACTCCGTATCGAGCCTCAGTTTTAGCCCAAAGAGCAACCTTCTGGTGGCAACTTCCTGGGATAACCAGGTGCGGTGCTGGGAGATTGTTGGGGGGAGTAGTCAACCAAAGGCATCTATATCGCATGACCAGCCAGTCCTCTGTTCAGCTTGGAAGGATGATGGAACTACTGTGTTCTCTGGAGGCTGTGATAAACAAGTAAAAATGTGGCCTCTGTTGTCTGGTGGGCAGGCTCAGACTGTTGCAATGCATGACGCACCTGTCAAGGAGATCGCTTGGATTCCTCAAATGAATCTTCTTGTCTCTGGAAGCTGGGATAAGACTCTAAGGTATTGGGACACAAGGCAATCAAATCCTGTCCATGTTCAGCAACTTCCTGAGCGCTGTTACGCACTTACAGTGAATTATCCCCTTATGATTGTGGGAACTGCTGATCGTAATCTGGTCGTCTTCAACTTGCAGAATCCTCAGACGGAGTTCAAGCGCATCCAATCGCCACTCAA]
consensusID : consensus_14333#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 191 fasta sequence
[GGAGTGCAGGCCACGGAGAGCCCGTTTGCTAAAGGGGAGGTGGTTGGCAAGTGGATGTGAAATTGATGTGGCAAAAGGTGAGGATTGCATGATGTTCGTGTAGAATGTGATGCGCCACGTTCTGGAGGATGTACTAAATTTACCCGTGAGAAACCNGTGGATGCTGACTTTCTGGTTTTGGCCCGTGAATC]
[+] EMBL BM420436 [GGAGTGCAGGCCACGGAGAGCCCGTTTGCTAAAGGGGAGGTGGTTGGCAAGTGGATGTGAAATTGATGTGGCAAAAGGTGAGGATTGCATGATGTTCGTGTAGAATGTGATGCGCCACGTTCTGGAGGATGTACTAAATTTACCCGTGAGAAACCNGTGGATGCTGACTTTCTGGTTTTGGCCCGTGAATC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14333#1 ------------------------------------------------------------
consensus_14333#2 ------------------------------------------------------------
consensus_14333#4 ------------------------------------------------------------
consensus_14333#0 GAACCAAAATCCGTAGGTCGTATCGTAGGGAGGGCCTGCGCCGATCCCCATCCGTCCCGC 60
consensus_14333#3 ------------------------------------------------------------
consensus_14333#1 ------------------------------------------------------------
consensus_14333#2 ------------------------------------------------------------
consensus_14333#4 ------------------------------------------------------------
consensus_14333#0 GACTCGAACTCGAGCGAGCAGAGGCGGCGCCGGCGCTCGTCCTGCCGCCACCGCCGCGGC 120
consensus_14333#3 ------------------------------------------------------------
consensus_14333#1 ------------------------------------------------------------
consensus_14333#2 ------------------------------------------------------------
consensus_14333#4 ------------------------------------------------------------
consensus_14333#0 CGCCTGAGCCGATCCCATCCATCCCGCGAGCGAGCGAGCGCTTCCGCCGCATCCTGGTCC 180
consensus_14333#3 ------------------------------------------------------------
consensus_14333#1 ------------------------------------------------------------
consensus_14333#2 ------------------------------------------------------------
consensus_14333#4 ------------------------------------------------------------
consensus_14333#0 TGGATCAGGTAGAAGGAGATGGCGACTCTTGGTCTTGCCCCAAACATGAATCCAAACAAG 240
consensus_14333#3 ------------------------------------------------------------
consensus_14333#1 ------------------------------------------------------------
consensus_14333#2 ------------------------------------------------------------
consensus_14333#4 ------------------------------------------------------------
consensus_14333#0 TCATTTGAGGTACTGCCTAATCCAGGTGACTCCGTATCGAGCCTCAGTTTTAGCCCAAAG 300
consensus_14333#3 ------------------------------------------------------------
consensus_14333#1 ------------------------------------------------------------
consensus_14333#2 ------------------------------------------------------------
consensus_14333#4 ------------------------------------------------------------
consensus_14333#0 AGCAACCTTCTGGTGGCAACTTCCTGGGATAACCAGGTGCGGTGCTGGGAGATTGTTGGT 360
consensus_14333#3 ------------------------------------------------------------
consensus_14333#1 ------------------------------------------------------------
consensus_14333#2 ------------------------------------------------------------
consensus_14333#4 ------------------------------------------------------------
consensus_14333#0 GGGAGTAGTCAACCAAAGGCATCTATATCGCATGACCAGCCAGTCCTCTGTTCAGCTTGG 420
consensus_14333#3 ------------------------------------------------------------
consensus_14333#1 ------------------------------------------------------------
consensus_14333#2 ------------------------------------------------------------
consensus_14333#4 ------------------------------------------------------------
consensus_14333#0 AAGGATGATGGAACTACTGTGTTCTCTGGAGGCTGTGATAAACAAGTAAAAATGTGGCCT 480
consensus_14333#3 ------------------------------------------------------------
consensus_14333#1 ------------------------------------------------------------
consensus_14333#2 ------------------------------------------------------------
consensus_14333#4 ------------------------------------------------------------
consensus_14333#0 CTGTTGTCTGGTGGGCAGGCTCAGACTGTTGCAATGCATGACGCACCTGTCAAGGAGATC 540
consensus_14333#3 ------------------------------------------------------------
consensus_14333#1 ------------------------------------------------------------
consensus_14333#2 ------------------------------------------------------------
consensus_14333#4 ------------------------------------------------------------
consensus_14333#0 GCTTGGATTCCTCAAATGAATCTTCTTGTCTCTGGAAGCTGGGATAAGACTCTAAGGTAT 600
consensus_14333#3 ------------------------------------------------------------
consensus_14333#1 ------------------------------------------------------------
consensus_14333#2 ------------------------------------------------------------
consensus_14333#4 ------------------------------------------------------------
consensus_14333#0 TGGGACACAAGGCAATCAAATCCTGTCCATGTTCAGCAACTTCCTGAGCGCTGTTACGCA 660
consensus_14333#3 ------------------------------------------------------------
consensus_14333#1 ------------------------------------------------------------
consensus_14333#2 ------------------------------------------------------------
consensus_14333#4 ------------------------------------------------------------
consensus_14333#0 CTTACAGTGAATTATCCCCTTATGATTGTGGGAACTGCTGATCGTAATCTGGTCGTCTTC 720
consensus_14333#3 ------------------------------------------------------------
consensus_14333#1 ------------------------------------------------------------
consensus_14333#2 ------------------------------------------------------------
consensus_14333#4 ------------------------------------------------------------
consensus_14333#0 AACTTGCAGAATCCTCAGACGGAGTTCAAGCGCATCCAATCGCCACTCAAATACCAGACT 780
consensus_14333#3 ------------------------------------------------------------
consensus_14333#1 ------------------------------------------------------------
consensus_14333#2 ------------------------------------------------------------
consensus_14333#4 ------------------------------------------------------------
consensus_14333#0 AGGTGTCTTGCTGCATTCCCGGATCAACAAGGATTTTTGGTGGGTTCCATAGAAGGAAGA 840
consensus_14333#3 ------------------------------------------------------------
consensus_14333#1 ---------------------GACTCACAGCAAAGCAAAAATTTCACGTTCAAATGTCAC 39
consensus_14333#2 ------------------------TCACAGCAAAGCAAAAATTTCACGTTCAAATGTCAC 36
consensus_14333#4 ------------------------------------------------------------
consensus_14333#0 GTTGGTGTGCATCATATTGATGACTCACAGCAAAGCAAAAATTTCACGTTCAAATGTCAC 900
consensus_14333#3 ------------------------------------------------------------
consensus_14333#1 AGGGAAGGGAATGATATTTTCTCTGTCAATTCACTCAATTTTCACCCAGTTCATCACACG 99
consensus_14333#2 AGGGAAGGGAATGATATTTTCTCTGTCAATTCACTCAATTTTCACCCAGTTCATCACACG 96
consensus_14333#4 ------------------------------------------------------------
consensus_14333#0 AGGGAAGGGAATGATATTTTCTCTGTCAATTCACTCAATTTTCACCCAGTTCATCACACG 960
consensus_14333#3 ------------------------------------------------------------
consensus_14333#1 TTTGCAACTGCTGGATCAGATGGCGCATTTAATTTCTGGGATAAGGATAGCAAACAAAGA 159
consensus_14333#2 TTTGCAACTGCTGGATCAGATGGCGCATTTAATTTCTGGGATAAGGATAGCAAACAAAGA 156
consensus_14333#4 ------------------------------------------------------------
consensus_14333#0 TTTGCAACTGCTGGATCAGATGGCGCATTTAATTTCTGGGATAAGGATAGCAAACAAAGA 1020
consensus_14333#3 ------------------------------------------------------------
consensus_14333#1 CTGAAGGCTTTTAGTCGGTGCCCTCTTCCTATTCCTTGCAGTACCTTCAACAGTGATGGG 219
consensus_14333#2 CTGAAGGCTTTTAGTCGGTGCCCTCTTCCTATTCCTTGCAGTACCTTCAACAGTGATGGG 216
consensus_14333#4 ------------------------------------------------------------
consensus_14333#0 CTGAAGGCTTTTAGTCGGTGCCCTCTTCCTATTCCTTGCAGTACCTTCAACAGTGATGGG 1080
consensus_14333#3 --------------CCGGAAATCGTCCTGCCGCCTGAGCCGATCCCATCCATGCCGCGAG 46
consensus_14333#1 TCGATATTTGCTTATGCAGTCTGCTATGACTGGAGCCGTGGGGCTGAAAACCACAACCCT 279
consensus_14333#2 TCGATATTTGCTTATGCAGTCTGCTATGACTGGAGCCGTGGGGCTGAAAACCACAACCCT 276
consensus_14333#4 ------------------------------------------------------------
consensus_14333#0 TCGATATTTGCTTATGCAGTCTGCTATGACTGGAGCCGTGGGGCTGAAAACCACAACCCT 1140
consensus_14333#3 CGAGCGAGCGCTTCCGCCGCATCCTGGTCCTGGTAGAAGGAGATGGCGACTCTTGGTCTT 106
consensus_14333#1 GCCACTGCAAAGACATCCATCTATCTTCACAGTCCACAGGAATCTGAGGTTAAAGGGAAG 339
consensus_14333#2 GCCACTGCAAAGACATCCATCTATCTTCACAGTCCACAGGAATTTGAGGTTAAAGGGAAG 336
consensus_14333#4 ------------------------------------------------------------
consensus_14333#0 GCCACTGCAAAGACATCCATCTATCTTCACAGTCCACAGGAATCTGAGGTTAAAGGGAAG 1200
consensus_14333#3 GCCCCAAACATGAATCCAAACAAGTCATTTGAGGTACTGCCTAATCCAGGTGACTCCGTA 166
consensus_14333#1 CCGAGAATCGCAACAAGTAGAAAGTGATTACATCCAGCTACGCAAAACCAAAGAGTGCAC 399
consensus_14333#2 CCGAGAATCGCAACAAGTAGAAAGTGATTACATCCAGCTACGCAAAACCAAAGAGTGCAC 396
consensus_14333#4 ------------------------------------------------------------
consensus_14333#0 CCGAGAATCGCAACAAGTAGAAAGTGATTACATCCAGCTACGCAAAACCAAAGAGTGCAC 1260
consensus_14333#3 TCGAGCCTCAGTTTTAGCCCAAAGAGCAACCTTCTGGTGGCAACTTCCTGGGATAACCAG 226
consensus_14333#1 AAGAAATCATGTACATTGGAAGACAAAAACGTTTCTCCAGGACCTCT--GTCCATCGTGT 457
consensus_14333#2 AAGAAATCATGTACATTGGAAGACAAAAACGTTTTTCCAGGACCTCTCTGTCCATCGTGT 456
consensus_14333#4 ------------------------------------------------------------
consensus_14333#0 AAGAAATCATGTACATTGGAAGACAAAAACGTTTCTCCAGGACCTCT--GTCCATCGTGT 1318
consensus_14333#3 GTGCGGTGCTGGGAGATTGTTGGGGGGAGTAGTCAACCAAAGGCATC---TATATCGCAT 283
consensus_14333#1 AGGATGCTTTTCTCTTGGTTGGTCATCAATTTTGTTGTGTCCAGTCTGGTGTTAGCATCT 517
consensus_14333#2 AGGATGCTTTTCTCTTGGTTGGTCATCAATTTTGTTGTGTCCAGTCTGGTGTTAGCATCT 516
consensus_14333#4 ------------------------------------------------------------
consensus_14333#0 AGGATGCTTTTCTCTTGGTTGGTCATCAATTTTGTTGTGTCCAGTCTGGTGTTAGCATCT 1378
consensus_14333#3 GACCAGCCAGTCCTCTGTTCAGCTTGGAAGGATGATGGAACTACTGTGTTCTCTGGA--- 340
consensus_14333#1 GGTAGATGTAAATGTCAGTCTACTCGTAGTCACTGAAGATAGGGGGTTTAGTCGCAGGTT 577
consensus_14333#2 GGTAGATGTAAATGTCAGCCTACTCGTAGTCACTGAAGATAGGGGGTTTAGTCGCAGGTT 576
consensus_14333#4 ------------------------------------------------------------
consensus_14333#0 GGTAGATGTAAATGTCAGTCTACTCGTAGTCACTGAAGATAGGGGGTTTAGTCGCAGGTT 1438
consensus_14333#3 GGCTGTGATAAACA--AGTAAAAATGTGGCCTCTGTTGTCTGGTGGGCAGGCTCAGACTG 398
consensus_14333#1 TTAGCATGCATCAGTTTGCAGTGTCTAGTTCTATTTAAGTTATGTTTACCAAGTTTATGC 637
consensus_14333#2 TTAGCATGCATCAGTTTGCAGTGTCTAGTTCTATTTAAGTTATGTTTACCAAGTTTATGC 636
consensus_14333#4 -----------------------------------------------------GGAGTGC 7
consensus_14333#0 TTAGCATGCATCAGTTTGCAGTGTCTAGTTCTATTTAAGTTATGTTTACCAAGTTTATGC 1498
consensus_14333#3 TTGCAATGCATGACGCACCTGTCAAGGAGATCGCTTGGATTCC-TCAAATGAATCTTCTT 457
consensus_14333#1 GAGTCTTATGTTGTCGATATAATCAGATCAGCCCGAACCGTTTCTAAGGGAGGTGTTGCA 697
consensus_14333#2 GAGTCTTA-----------TAATCAGATCAGCCCGAACCGTTTTTAAGGGAGGTGTTGCA 685
consensus_14333#4 AGGCCACGGA-----GAGCCCGTTTGCTAAAGGGGAGGTGGTTGGCAAGTGGATGT-GAA 61
consensus_14333#0 GAGTCTTATGTTGTCGATATAATCAGATCAGCCCGAACCGTTTCTAAGGGAGGTGTTGCA 1558
consensus_14333#3 GTCTCTGGAAGCTGGGATAAGACTCTAAGGTATTGGGACACAAGGCAATCAAATCCTGTC 517
* * * * *
consensus_14333#1 AGTGATGTAAATTATTGCAAATGTAGATTCATATTTCGTTAGAATT--AT-CGCCACGTT 754
consensus_14333#2 AGTGATGTAAATTATTGCAAATGTAGATTCATATTTCGATGGAATT--AT-CGCCACGTT 742
consensus_14333#4 ATTGATGTGGCAAAAGGTGAGGATTGCATGATGTTCGTGTAGAATGTGATGCGCCACGTT 121
consensus_14333#0 AGTGATGTAAATTATTGCAAATGTAGATTCATATTTCGTTAGAATT--AT-CGCCACGTT 1615
consensus_14333#3 CATGTTCAGCAACTTCCTGAGCGCTGTTACGCACTTACAGTGAATTATCCCCTTATGATT 577
** * * * * **** * **
consensus_14333#1 CTGA-----GATGTACTAAATTTACCCGTGAGAAACCAGTGGATGCTGACTTTCTGGTTT 809
consensus_14333#2 CTGA-----GAAAAAAAAAAATTAAAAAGGAGAAACCCGTGGATGCTGACTTTCTGGTTT 797
consensus_14333#4 CTGGAG---GATGTACTAAATTTACCCGTGAGAAACCNGTGGATGCTGACTTTCTGGTTT 178
consensus_14333#0 CTGA-----GATGTACTAAATTTACCCGTGAGAAACCAGTGGATGCTGACTTTCTGGTTT 1670
consensus_14333#3 GTGGGAACTGCTGATCGTAATCTGGTCGTCTTCAACTTGCAGAATCCTCAGACGGAGTTC 637
** * ** * *** * ** * ***
consensus_14333#1 TGGCC----AAAAAAAAAGA---------------------------------------- 825
consensus_14333#2 TGGCCCGTGAAAAAAAAAAA---------------------------------------- 817
consensus_14333#4 TGGCCCGTGAATC----------------------------------------------- 191
consensus_14333#0 TGGCCCGTGAATCTGAATGGCCTACTTGAATTTGAAATGGTAGCTGTCTGAAAAATACGA 1730
consensus_14333#3 AAGCGCATCCAATCGCCACTCAA------------------------------------- 660
** *
consensus_14333#1 -
consensus_14333#2 -
consensus_14333#4 -
consensus_14333#0 T 1731
consensus_14333#3 -
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||