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Oryza sativa
cluster # 14395 cluster # 14395       Sequences # 16       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14395#0 length = 843 sequences # 12  
consensus_14395#1 length = 536 sequences # 2  
consensus_14395#2 length = 282 sequences # 1  
consensus_14395#3 length = 235 sequences # 1  

consensusID : consensus_14395#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 843
fasta sequence
                              [TTTTTTTTTTTTTTTTTTTTTTTTTTTTGATGGACTGAAAAACATAGTATAACCTTAATTTAGCATCAGTTCATGTAAGACAGGTGACAAATATAACTTTTTCAGTGACAGATCACAACCCGTGATTCATCTATGACGACACCAACATAAAATCTCATAATACCAGACAAGAGCGTGGTTAAGCAGAACACAAAAAATAAACAAGAGGCAAAGAACCAAAGG-TAAA-ACATGGCAATGTGTCTTATTCCTCCTGGGAAGCAGGCGACTTCTTCTTCG-CAACAGAAGCCCTCCTTCCCTTCAGCGTCCTGCAATTGTTCTTCGTCCTCTGTCCACGAACTGGCAGCCCTAGCTTGTGGCGGATGCCCC-TGTAACACCTAATCTCCTTCAACCTCTCAATCGCCACACGATTAAACCGTTTAAGGTCTCCCTCAATCATGTACTTGGTAACCTCCTTACGGAGAGTGATGACTTCCTCCTCGGAGAGGTCCTTTGTGACCTTGTTGTCAAAATTGAGGTCCAAGAGGATCTGACGGGAGCGTGACCGCCCAATGCCATGGATGTACTGCAGTGAGTACTCTACCCTCTTGTGGTTCGGGATCTCCACTCCACCAATACGAATGCACTCGATCCGCAGGCCACCATGACCAATACCCCCTTTCTTGGGAACGGGGAAGGAGACGGAGGAGCTGCGGCCTCGGGCGGAGAGGGGCAGGGAGGAGGTGGCGATGGGGACGGAGACCATCGAGAGGGTCGCCATTTCTGCGCTCCCGACGAGGGACGGAGGTGCGTGCGCTTCTCTCCCGGAGCTCTCGGTGCTGTCTCGGATAGAACCCAACGGGAAGG]

[+] EMBL CF335521             [TTTTTTTTTTTTTTTTTTTTTTTTTTTTGATGGACTGAAAAACATAGTATAACCTTAATTTAACATCAGTTCATGTAAAACAGGGGACAAATATAACTTTTTCAGTGACAGATCACAACCCGTGATTCATCTATGACGACCCCAACATAAAATCTCATAATACCAGACAAGAACGTGGTCAAGCCGAACACAAAAAATAAACCAGAGGCCAAGAACCCAAGG GAAATACATGGCAATGGGTCTTATTCCTCCTGGGAAACAGGCGACTTTTTTTTCG CAACAAAAGCCCTCCTTCCCTTCAACGGCCTGCAATTGGTCTTCGTCCTCTGTCCACGAACTGGCAGCCCTAACTTGTGGCGGATGCCCC TG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CF298905             [            TTTTTTTTTTTTTTTT  TGGACTGAAAAACATAGTATAACCTTAATTTAGCATCAGTTCATGTAAGACAGGTGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL BI805842             [                  TTTTTTTTTTGATGGACTGAAAAACATAGTATAACCTTAATTTAGCATCAGTTCATGTAAGACAGGTGACAAATATAACTTTTTCAGTGACAGATCACAACCCGTGATTCATCTATGACGACACCAACATAAAATCTCATAATACCGGACAAGAGCGTGGTCAAGCAGAACACAAAAAATAAACNAGAGGCAAAGAACCAAAGG TAAATACATGGCAATGTGTCTTATTCCTCCTGGGAAGCAGGCGA TTCTTCTTCGACAACAGAAGCCCTCCTTCCCTTCAGCGTCCTGCAATTGTTCTTCGTCCTCTGTCCACGAACTGGCAGCCCTAGCTTGTGGCGGATGCCCCGTGTAACACCTAATCTCCTTCAA CTCTCAATCGCCACACGATTAAACCG TTAAGGTCTCCCTCAATCATGTACTTGGTAACCTCCTTACGGAG                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CF279388             [                      TTTTTTGATGGACTGAAAAACATTTCATAACCTTAATTTAGCATCAGTTCATGTAAGACAGGTGACAAATATAACTTTTTCAGTGACAGATCACAACCCGTGATTTATCTATGACGACACCAACATAAAATCTCATAATACCAGACAAGAGCTTGGTTAAGCAGAACACAAAAAATTAACAAGAGGCAAAGAACCAAAGG GTAA ACATGGCAATGTGTCTTATTCCTCCTGGGAAGCAGGCGACTTCTTCTTCG CAACAGAAGCCCTCCTTCCCTTCAGCGTCCTGCAATTGTTCTTCGTCCTCTGTCCACGAACTGGCAGCCCTAGCTTGTGGCGGATGCCCC TGTAACACCTAATCTCCTTCAACCTCTCAATCGCCACACGATTAAACCGTTTAAGGTCTCCCTCAATCATGTACTTGGTAACCTCCTTACGGAGAGTGATGACTTCCTCCTCGGAGAGGTCCTTTGTGACCTTGTTGTCAAAATTGAGGTCCAAGAGGATCTGACGGGAGCGTGACCGCCCAATGCCATGGATGTACTGCAGTGAGTACTCTACCCTCTTGTGGTTCGGGATCTCCACTCCACCAATACGAATGCACTCGATCCGCAGGCCACCATGACCAATACCCCCTTTCTTG                                                                                                                                                                                     ]
[+] EMBL CF281470             [                       TTTTT  TGGACTGAAAAACATAGTATCACCTTAATTTAGCATCAGTTCATGTAAGACAGGTGACAAATATAACTTTTTCAGTGACAGATCACAACCCGTGATTCATCTATGACGACACCAACATAAAATCTCATAATACCAGACAAGAGCGTGGTTTATCAGAACACAAAAAATAAACAAGAGGCAAAGAACCAAAGGTTATT TCATGGCAATGTGTCTTATTCCTCCTGGGAAGCAGGCGACTTCTTCTTCG CAACAGAAGCCCTCCTTCCCTTCAGCGTCCTGCAATTGTTCTTCGTCCTCTGTCCACGAACTGGCAGCCCTAGCTTGTGGCGGATGCCCC TGTAACACCTAATCTCCTTCAACCTCTCAATCGCCACACGATTAAACCGTTTAAGGTCTCCCTCAATCATGTACTTGGTAACCTCCTTACGGAGAGTGATGACTTCCTCCTCGGAGAGGTCCTTTGTGACCTTGTTGTCAAAATTGAGGTCCAAGAGGATCTGACGGGAGCGTGACCGCCCAATGCCA                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CF295463             [                              tttttTGAAAAACATAGTATTTTCTTAATTTAGCATCAGTTCATGTAAGACAGGTGACAAATATAACTTTTTCAGTGACAGATCACAACCCGTGATTCATTTATGACGACACCAACATAAAATCTCATAATACCAGACAAGAGCGTGGTTTTTCTGAACACAAAAAATAAACTTGAGGCAAAGAACCAAAGG TAAATACATGGCAATGTGTCTTATTCCTCCTGGGAAGCAGGCGACTTCTTCTTCG CAACAGAAGCCCTCCTTCCCTTCAGCGTCCTGCAATTGTTCTTCGTCCTCTGTCCACGAACTGGCAGCCCTAGCTTGTGGCGGATGCCCC TGTAACACCTAATCTCCTTCAACCTCTCAATCGCCACACGATTAAACCGTTTAAGGTCTCCCTCAATCATGTACTTGGTA                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CF279387             [                                                                                                                                                                                                                                                                                                                      GCAATTGTTCTTCGTCCTCTGTCCACGAACTGGCAGCCCTAGCTTGTGGCGGATGCCCC TGTAACACCTAATCTCCTTCAACCTCTCAATCGCCACACGATTAAACCGTTTAAGGTCTCCCTCAATCATGTACTTGGTAACCTCCTTACGGAGAGTGATGACTTCCTCCTCGGAGAGGTCCTTTGTGACCTTGTTGTCAAAATTGAGGTCCAAGAGGATCTGACGGGAGCGTGACCGCCCAATGCCATGGATGTACTGCAGTGAGTACTCTACCCTCTTGTGGTTCGGGATCTCCACTCCACCAATACGAATGCACTCGATCCGCAGGCCACCATGACCAATACCCCCTTTCTTGGGAACGGGGAAGGAGACGGAGGAGCTGCGGCCTCGGGCGGAGAGGGGCAGGGAGGAGGTGGCGATGGGGACGGAGACCATCGAGAGGGTCGCCATTTCTGCGCTCCCGACGAGGGACGGAGGTGCGTGCGCTTCTCTCCCGGAGCTCTCGGT                             ]
[-] EMBL CF301992             [                                                                                                                                                                                                                                                                                                                      GCAATTGTTCTTCGTCCTCTGTCCACGAACTGGCAGCCCTAGCTTGTGGCGGATGCCCC TGTAACACCTAATCTCCTTCAACCTCTCAATCGCCACACGATTAAACCGTTTAAGGTCTCCCTCAATCATGTACTTGGTAACCTCCTTACGGAGAGTGATGACTTCCTCCTCGGAGAGGTCCTTTGTGACCTTGTTGTCAAAATTGAGGTCCAAGAGGATCTGACGGGAGCGTGACCGCCCAATGCCATGGATGTACTGCAGTGAGTACTCTACCCTCTTGTGGTTCGGGATCTCCACTCCACCAATACGAATGCACTCGATCCGCAGGCCACCATGACCAATACCCCCTTTCTTGGGAACGGGGAAGGAGACGGAGGAGCTGCGGCCTCGGGCGGAGAGGGGCAGGGAGGAGGTGGCGATGGGGACGGAGACCATCGAGAGGGTCGCCATTTCTGCGCTCCCGACGAGGGACGGAGGTGCGTGCGCTTCTCTCCCGGAGCTCTCGGTGCTGTCTCGGATAGAACCCAACGGGAAGG]
[-] EMBL CF300849             [                                                                                                                                                                                                                                                                                                                       CAATTGTTCTTCGTCCTCTGTCCACGAACTGGCAGCCCTAGCTTGTGGCGGATGCCCC TGTAACACCTAATCTCCTTCAACCTCTCAATCGCCACACGATTAAACCGTTTAAGGTCTCCCTCAATCATGTACTTGGTAACCTCCTTACGGAGAGTGATGACTTCCTCCTCGGAGAGGTCCTTTGTGACCTTGTTGTCAAAATTGAGGTCCAAGAGGATCTGACGGGAGCGTGACCGCCCAATGCCATGGATGTACTGCAGTGAGTACTCTACCCTCTTGTGGTTCGGGATCTCCACTCCACCAATACGAATGCACTCGATCCGCAGGCCACCATGACCAATACCCCCTTTCTTGGGAACGGGGAAGGAGACGGAGGAGCTGCGGCCTCGGGCGGAGAGGGGCAGGGAGGAGGTGGCGATGGGGACGGAGACCATCGAGAGGGTCGCCATTTCTGCGCTCCCGACGAGGGACGGAGGTGCGTGCGCTTCTCTCCCGGAGCTCTCGGTGC                           ]
[-] EMBL CF335520             [                                                                                                                                                                                                                                                                                                                                                                                                        CCTCTCAATCGCCACACGATTAAACCGTTTAAGGTCTCCCTCAATCATGTACTTGGTAACCTCCTTACGGAGAGTGATGACTTCCTCCTCGGAGAGGTCCTTTGTGACCTTGTTGTCAAAATTGAGGTCCAAGAGGATCTGACGGGAGCGTGACCGCCCAATGCCATGGATGTACTGCAGTGAGTACTCTACCCTCTTGTGGTTCGGGATCTCCACTCCACCAATACGAATGCACTCGATCCGCAGGCCACCATGACCAATACCCCCTTTCTTGGGAACGGGGAAGGAGACGGAGGAGCTGCGGCCTCGGGCGGAGAGGGGCAGGGAGGAGGTGGCGATGGGGACGGAGACCATCGAGAGGGTCGCCATTTCTGCGCTCCCGACGAGGGACGGAGGTGCGTGCGCTTCTCTCCCGGAGCTCTCGGTGCTGTCTCGGATAGAACCCAACGGGAAGG]
[-] EMBL CF295462             [                                                                                                                                                                                                                                                                                                                                                                                                        CCTCTCAATCGCCACACGATTAAACCGTTTAAGGTCTCCCTCAATCATGTACTTGGTAACCTCCTTACGGAGAGTGATGACTTCCTCCTCGGAGAGGTCCTTTGTGACCTTGTTGTCAAAATTGAGGTCCAAGAGGATCTGACGGGAGCGTGACCGCCCAATGCCATGGATGTACTGCAGTGAGTACTCTACCCTCTTGTGGTTCGGGATCTCCACTCCACCAATACGAATGCACTCGATCCGCAGGCCACCATGACCAATACCCCCTTTCTTGGGAACGGGGAAGGAGACGGAGGAGCTGCGGCCTCGGGCGGAGAGGGGCAGGGAGGAGGTGGCGATGGGGACGGAGACCATCGAGAGGGTCGCCATTTCTGCGCTCCCGACGAGGGACGGAGGTGCGTGCGCTTCTCTCCCGGAGCTCTCGGTGCTGTCTCGGATAGAACCCAACGGGAAG ]
[-] EMBL AU181730             [                                                                                                                                                                                                                                                                                                                                                                                                         CTCTCAATCGCCACACGATTAAACCGTTTAAGGTCTCCCTCAATCATGTACTTGGTAACCTCCTTACGGAGAGTGATGACTTCCTCCTCGGAGAGGTCCTTTGTGACCTTGTTGTCAAAATTGAGGTCCAAGAGGATCTGACGGGAGCGTGACCGCCCAATGCCATGGATGTACTGCAGTGAGTACTCTACCCTCTTGTGGTTCGGGATCTCCACTCCACCAATACGAATGCACTCGATCCGCAGGCCACCATGACCAATACCCCCTTTCTTGGGAACGGGGAAGGAGACGGAGGAGCTGCGGCCTCGGGCGGAGAGGGGCAGGGAGGAGGTGGCGATGGGGACGGAGACCATCGAGAGGGTCGCCATTTCTGCGCTCCCGACGAGGGACGGAGGTGCGTGCGCTTCTCTCCCGGAGCTCTCGGTGCTGTCTCGGATA                ]


>consensus_14395#0 TTTTTTTTTTTTTTTTTTTTTTTTTTTTGATGGACTGAAAAACATAGTATAACCTTAATT TAGCATCAGTTCATGTAAGACAGGTGACAAATATAACTTTTTCAGTGACAGATCACAACC CGTGATTCATCTATGACGACACCAACATAAAATCTCATAATACCAGACAAGAGCGTGGTT AAGCAGAACACAAAAAATAAACAAGAGGCAAAGAACCAAAGGTAAAACATGGCAATGTGT CTTATTCCTCCTGGGAAGCAGGCGACTTCTTCTTCGCAACAGAAGCCCTCCTTCCCTTCA GCGTCCTGCAATTGTTCTTCGTCCTCTGTCCACGAACTGGCAGCCCTAGCTTGTGGCGGA TGCCCCTGTAACACCTAATCTCCTTCAACCTCTCAATCGCCACACGATTAAACCGTTTAA GGTCTCCCTCAATCATGTACTTGGTAACCTCCTTACGGAGAGTGATGACTTCCTCCTCGG AGAGGTCCTTTGTGACCTTGTTGTCAAAATTGAGGTCCAAGAGGATCTGACGGGAGCGTG ACCGCCCAATGCCATGGATGTACTGCAGTGAGTACTCTACCCTCTTGTGGTTCGGGATCT CCACTCCACCAATACGAATGCACTCGATCCGCAGGCCACCATGACCAATACCCCCTTTCT TGGGAACGGGGAAGGAGACGGAGGAGCTGCGGCCTCGGGCGGAGAGGGGCAGGGAGGAGG TGGCGATGGGGACGGAGACCATCGAGAGGGTCGCCATTTCTGCGCTCCCGACGAGGGACG GAGGTGCGTGCGCTTCTCTCCCGGAGCTCTCGGTGCTGTCTCGGATAGAACCCAACGGGA AGG



consensusID : consensus_14395#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 536
fasta sequence
                              [GCAATTGTTCTTCGTCCTCTGTCCACGAACTGGCAGCCCTAGCTTGTGGCGGATGCCCCTGTAACACNTAATCTCCTTCAACCTCTCAATCGCCACACGATTAAACCGTTTAAGGTCTCCCTCAATCATGTAC-TTGGTAA-CCTCCTTACGGAGAGTGA-TGACTTCCTCC-TCGGAGAGGTCCTTTGTGACCTTGTTGTCAAAATTGAGGTCCAAGAGGATCTGACGGGAGCGTGACCGCCCAATGCCATGGATGTACTGCAGTGAGTACTCTACCCTCTTGTGGTTCGGGATCTCCACTCCACCAATACGAATGCACTCGATCCGCAGGCCACCATGACCAATACCCCCTTTCTTGGGAACGGGGAAGGAGACGGAGGAGCTGCGGCCTCGGGCGGAGAGGGGCAGGGAGGAGGTGGCGATGGGGACGGAGACCATCGAGAGGGTCGCCATTTCTGCGCTCCCGACGAGGGACGGAGGTGCGTGCGCTTCTCTCCCGGAGCTCTCGGTGCTGTCTCGGTTTCTACTCCTTCAGTCCA]

[-] EMBL CF281469             [GCAATTGTTCTTCGTCCTCTGTCCACGAACTGGCAGCCCTAGCTTGTGGCGGATGCCCCTGTAACACNTAATCTCCTTCAACCTCTCAATCGCCACACGATTAAACCGTTTAAGGTCTCCCTCAATCATGTAC TTGGTAA CCTCCTTACGGAGAGTGA TGACTTCCTCC TCGGAGAGGTCCTTTGTGACCTTGTTGTCAAAATTGAGGTCCAAGAGGATCTGACGGGAGCGTGACCGCCCAATGCCATGGATGTACTGCAGTGAGTACTCTACCCTCTTGTGGTTCGGGATCTCCACTCCACCAATACGAATGCACTCGATCCGCAGGCCACCATGACCAATACCCCCTTTCTTGGGAACGGGGAAGGAGACGGAGGAGCTGCGGCCTCGGGCGGAGAGGGGCAGGGAGGAGGTGGCGATGGGGACGGAGACCATCGAGAGGGTCGCCATTTCTGCGCTCCCGACGAGGGACGGAGGTGCGTGCGCTTCTCTCCCGGAGCTCTCGGTGCTGTCTCGGTTTCTACTCCTTCAGTCCA]
[-] EMBL OSS14842A            [                                                                                                                     TCCCTCAATCATGTACTTTGGTAANCCTCCTTACGGAGAGTGATTGACTTCCTCCTTCGGAGAGGTCCTTTGTGACCTTGTTGTCAAAATTGAGGTCCAAGAGGATCTGACGGGACCGTGACCGCCCAATGCCATGGATGTACTGCAGTGAGTACTCTACCCTCTTGTGGTTCGGGATCTCCACTCCACCAATACGAATGCACTCGATCCGCAGGCCACCATGACCAATACCCCCTTTCTTGGGAACGGGGAAGGAGACGGAGGAGCTGCGGCCTCGGGCGGAGAGGGGCAGGGAGGAGGTGGCGATGGGGACGGAGACCATCGAGAGGGTCGCCATTTCTGCGCTCCCGACGAGGGAC                                                                ]


>consensus_14395#1 GCAATTGTTCTTCGTCCTCTGTCCACGAACTGGCAGCCCTAGCTTGTGGCGGATGCCCCT GTAACACNTAATCTCCTTCAACCTCTCAATCGCCACACGATTAAACCGTTTAAGGTCTCC CTCAATCATGTACTTGGTAACCTCCTTACGGAGAGTGATGACTTCCTCCTCGGAGAGGTC CTTTGTGACCTTGTTGTCAAAATTGAGGTCCAAGAGGATCTGACGGGAGCGTGACCGCCC AATGCCATGGATGTACTGCAGTGAGTACTCTACCCTCTTGTGGTTCGGGATCTCCACTCC ACCAATACGAATGCACTCGATCCGCAGGCCACCATGACCAATACCCCCTTTCTTGGGAAC GGGGAAGGAGACGGAGGAGCTGCGGCCTCGGGCGGAGAGGGGCAGGGAGGAGGTGGCGAT GGGGACGGAGACCATCGAGAGGGTCGCCATTTCTGCGCTCCCGACGAGGGACGGAGGTGC GTGCGCTTCTCTCCCGGAGCTCTCGGTGCTGTCTCGGTTTCTACTCCTTCAGTCCA



consensusID : consensus_14395#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 282
fasta sequence
                              [TTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTGGACTGGAAAACATAATATAACCTTAATTTAACATCAGTTCATGTTAAACAGGGGACAAAAATAACTTTTTTAGTGACAGAACACAACCCGGGATTCATTTTTGACTTTTCCCACCTAAAATTTCATAATACCCAACCAGAACGTGGGCCAGCCTTACCCAAAAAATAAACCAGAGGCCAAGAACCCAAGGGAAATACATGGCAATGGGTTTTATTTCTTCTGGGAAGGAGGGGAATTTTTTTTTTCA]

[+] EMBL CF300850             [TTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTGGACTGGAAAACATAATATAACCTTAATTTAACATCAGTTCATGTTAAACAGGGGACAAAAATAACTTTTTTAGTGACAGAACACAACCCGGGATTCATTTTTGACTTTTCCCACCTAAAATTTCATAATACCCAACCAGAACGTGGGCCAGCCTTACCCAAAAAATAAACCAGAGGCCAAGAACCCAAGGGAAATACATGGCAATGGGTTTTATTTCTTCTGGGAAGGAGGGGAATTTTTTTTTTCA]


>consensus_14395#2 TTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTGGACTGGAAAACATAATATAACCTTA ATTTAACATCAGTTCATGTTAAACAGGGGACAAAAATAACTTTTTTAGTGACAGAACACA ACCCGGGATTCATTTTTGACTTTTCCCACCTAAAATTTCATAATACCCAACCAGAACGTG GGCCAGCCTTACCCAAAAAATAAACCAGAGGCCAAGAACCCAAGGGAAATACATGGCAAT GGGTTTTATTTCTTCTGGGAAGGAGGGGAATTTTTTTTTTCA



consensusID : consensus_14395#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 235
fasta sequence
                              [TTTTTTTTTTTTTTTTTTTTTGGACTGAAAAAATAGTATAACCTTAATTTAACATCAGTTCATGTAAAACAGGGGACAAATATAACTTTTCAGGGACAAATCACAACCCGTGATTCATTTTTGACGACCCCAACATAAAATCTCATAATACCAAACAAAAGCGGGGGCAAGCCGAACCCAAAAAATAAACCAGAGGCCAAGAACCCAAGGGAAATACATGGCAATGGGTCTTATT]

[+] EMBL CF301991             [TTTTTTTTTTTTTTTTTTTTTGGACTGAAAAAATAGTATAACCTTAATTTAACATCAGTTCATGTAAAACAGGGGACAAATATAACTTTTCAGGGACAAATCACAACCCGTGATTCATTTTTGACGACCCCAACATAAAATCTCATAATACCAAACAAAAGCGGGGGCAAGCCGAACCCAAAAAATAAACCAGAGGCCAAGAACCCAAGGGAAATACATGGCAATGGGTCTTATT]


>consensus_14395#3 TTTTTTTTTTTTTTTTTTTTTGGACTGAAAAAATAGTATAACCTTAATTTAACATCAGTT CATGTAAAACAGGGGACAAATATAACTTTTCAGGGACAAATCACAACCCGTGATTCATTT TTGACGACCCCAACATAAAATCTCATAATACCAAACAAAAGCGGGGGCAAGCCGAACCCA AAAAATAAACCAGAGGCCAAGAACCCAAGGGAAATACATGGCAATGGGTCTTATT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14395#2      ------------------------------------------------------------
consensus_14395#3      ------------------------------------------------------------
consensus_14395#0      ------------------------------------------------------------
consensus_14395#1      GCAATTGTTCTTCGTCCTCTGTCCACGAACTGGCAGCCCTAGCTTGTGGCGGATGCCCCT 60
                                                                                   

consensus_14395#2      ------------------------------------------------------------
consensus_14395#3      ------------------------------------------------------------
consensus_14395#0      ------------------------------------------------------------
consensus_14395#1      GTAACACNTAATCTCCTTCAACCTCTCAATCGCCACACGATTAAACCGTTTAAGGTCTCC 120
                                                                                   

consensus_14395#2      ---------------------------------------------TTTTTTTTTTTTTTT 15
consensus_14395#3      ----------------------------------------------------------TT 2
consensus_14395#0      ------------------------------------------------TTTTTTTTTTTT 12
consensus_14395#1      CTCAATCATGTACTTGGTAACCTCCTTACGGAGAGTGATGACTTCCTCCTCGGAGAGGTC 180
                                                                                 * 

consensus_14395#2      CTTTTTTTTTTTTTTTTTTGGACTGGAA---AACATAATATAACCTTAATTTAACA--TC 70
consensus_14395#3      TTTTTTTTTTTTTTTTTTTGGACTGAAA---AA-ATAGTATAACCTTAATTTAACA--TC 56
consensus_14395#0      TTTTTTTTTTTTTTTTGATGGACTGAAA---AACATAGTATAACCTTAATTTAGCA--TC 67
consensus_14395#1      CTTTGTGACCTTGTTGTCAAAATTGAGGTCCAAGAGGATCTGACGGGAGCGTGACCGCCC 240
                        *** *    ** **      * **      ** *   * * **   *   *  *    *

consensus_14395#2      AGTTC-----ATGTTAAACAGGGGACAAAAATAACTTTTTTAGTGACAGAACACAACCCG 125
consensus_14395#3      AGTTC-----ATGTAAAACAGGGGACAAATATAACTTTTC-AGGGACAAATCACAACCCG 110
consensus_14395#0      AGTTC-----ATGTAAGACAGGTGACAAATATAACTTTTTCAGTGACAGATCACAACCCG 122
consensus_14395#1      AATGCCATGGATGTACTGCAGTGAGTACTCTACCCTCTTGTGGTTCGGGATCTCCACTCC 300
                       * * *     ****    ***     *       ** **   *      * * * ** * 

consensus_14395#2      G--GATTCATTT----TTGACTTTTCCCACCTAAAATTTCATAATACCCAACCAGAACGT 179
consensus_14395#3      T--GATTCATTT----TTGACGACCCCAACATAAAATCTCATAATACCAAACAAAAGCGG 164
consensus_14395#0      T--GATTCATCT----ATGACGACACCAACATAAAATCTCATAATACCAGACAAGAGCGT 176
consensus_14395#1      ACCAATACGAATGCACTCGATCCGCAGGCCACCATGACCAATACCCCCTTTCTTGGGAAC 360
                           ** *   *      **         *   *      ***   **   *        

consensus_14395#2      GGGCCAGCCTTACCCAAAAAATA-AACCAGAGGCCAAGAACCCAAGGGAAATACATGGCA 238
consensus_14395#3      GGGCAAGCCGAACCCAAAAAATA-AACCAGAGGCCAAGAACCCAAGGGAAATACATGGCA 223
consensus_14395#0      GGTTAAGCAGAACACAAAAAATA-AACAAGAGGCAAAGAACCAAAGGTAAA-ACATGGCA 234
consensus_14395#1      GGGGAAGGAG-ACGGAGGAGCTGCGGCCTCGGGCGGAGAGGGGCAGGGAGG-AGGTGGCG 418
                       **   **    **  *  *  *    *    ***  ***     *** *   *  **** 

consensus_14395#2      ATGGGTTTTATTTCTTCTGGGAAGGAGGGGAATTTTTTTTTTCA---------------- 282
consensus_14395#3      ATGGGTCTTATT------------------------------------------------ 235
consensus_14395#0      ATGTGTCTTATTCCTCCTGGGAAGCAGGCGACTTCTTCTTCGCAACAGAAGCCCTCCTTC 294
consensus_14395#1      ATGGGGACGGAGACCATCGAGAGGGTCGCCATTTCTGCGCTCCCGACGAGGGACGGAGGT 478
                       *** *                                                       

consensus_14395#2      ------------------------------------------------------------
consensus_14395#3      ------------------------------------------------------------
consensus_14395#0      CCTTCAGCGTCCTGCAATTGTTCTTCGTCCTCTGTCCACGAACTGGCAGCCCTAGCTTGT 354
consensus_14395#1      GCGTGCGCTTCTCTCCCGGAGCTCTCGGTGCTGTCTCGGTTTCTACTCCTTCAGTCCA-- 536
                                                                                   

consensus_14395#2      ------------------------------------------------------------
consensus_14395#3      ------------------------------------------------------------
consensus_14395#0      GGCGGATGCCCCTGTAACACCTAATCTCCTTCAACCTCTCAATCGCCACACGATTAAACC 414
consensus_14395#1      ------------------------------------------------------------
                                                                                   

consensus_14395#2      ------------------------------------------------------------
consensus_14395#3      ------------------------------------------------------------
consensus_14395#0      GTTTAAGGTCTCCCTCAATCATGTACTTGGTAACCTCCTTACGGAGAGTGATGACTTCCT 474
consensus_14395#1      ------------------------------------------------------------
                                                                                   

consensus_14395#2      ------------------------------------------------------------
consensus_14395#3      ------------------------------------------------------------
consensus_14395#0      CCTCGGAGAGGTCCTTTGTGACCTTGTTGTCAAAATTGAGGTCCAAGAGGATCTGACGGG 534
consensus_14395#1      ------------------------------------------------------------
                                                                                   

consensus_14395#2      ------------------------------------------------------------
consensus_14395#3      ------------------------------------------------------------
consensus_14395#0      AGCGTGACCGCCCAATGCCATGGATGTACTGCAGTGAGTACTCTACCCTCTTGTGGTTCG 594
consensus_14395#1      ------------------------------------------------------------
                                                                                   

consensus_14395#2      ------------------------------------------------------------
consensus_14395#3      ------------------------------------------------------------
consensus_14395#0      GGATCTCCACTCCACCAATACGAATGCACTCGATCCGCAGGCCACCATGACCAATACCCC 654
consensus_14395#1      ------------------------------------------------------------
                                                                                   

consensus_14395#2      ------------------------------------------------------------
consensus_14395#3      ------------------------------------------------------------
consensus_14395#0      CTTTCTTGGGAACGGGGAAGGAGACGGAGGAGCTGCGGCCTCGGGCGGAGAGGGGCAGGG 714
consensus_14395#1      ------------------------------------------------------------
                                                                                   

consensus_14395#2      ------------------------------------------------------------
consensus_14395#3      ------------------------------------------------------------
consensus_14395#0      AGGAGGTGGCGATGGGGACGGAGACCATCGAGAGGGTCGCCATTTCTGCGCTCCCGACGA 774
consensus_14395#1      ------------------------------------------------------------
                                                                                   

consensus_14395#2      ------------------------------------------------------------
consensus_14395#3      ------------------------------------------------------------
consensus_14395#0      GGGACGGAGGTGCGTGCGCTTCTCTCCCGGAGCTCTCGGTGCTGTCTCGGATAGAACCCA 834
consensus_14395#1      ------------------------------------------------------------
                                                                                   

consensus_14395#2      ---------
consensus_14395#3      ---------
consensus_14395#0      ACGGGAAGG 843
consensus_14395#1      ---------
                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)