cluster # 1440

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Oryza sativa
cluster # 1440 cluster # 1440 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1440#0 length = 2004 sequences # 2
consensusID : consensus_1440#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2004
fasta sequence
                              [TGGGGGCACCACGTGCGGCATTGCGGTGGTGGTGGTGGTGGTGGCGGAGGAGGCCGAGGTGCGGGTGCGGGGGAGGAGGAGGAGGAGGTGGAGGAGGAGGAGGAGGAGGAGGCGGGCCGCAGCGACGGTGAGGGTGGAGGACGCCGGCGAGGTGAGGGGGCTGCCGCCGCCGTCGCCGGCGACGGGGCCGCACGCCGGCGGCGGTAGGTCGCGCGGGGCGCGGCGGCAGGGGGAGACCATCGCCAAGGGCCACAAGAACTATGAGCTTATGCTCAACCTCCAGCTCGGCATCAGACATGCAGTAGGAAAACAAGGCCCGATTACGCTTGATTTGAAGTCATCAGCTTTTGACCCAAAGGAGAAAGTATGGACAAGGTTTCCTCCAGAAGGATCAAAGTACACCCCTCCTCACAGTTCTTGCGATTTCAAATGGAAAGATTACTGCCCGCAAGTGTTCCGGACACTACGCAAGTTATTCAAGGTTGATGCGGCAGATTATATGTTGTCCCTTTGTGGTGATCAGGCTCTCCGGGAGCTCTCATCCCCCGGTAAGAGTGGAAGCTTCTTTTATCTCACGAGCAATGATCAGTACATGATAAAGACGATGAAGAAATCTGAAGTAAAGATATTTCTTAAGATGCTTCGAGCTTACTACAATCATGTTCGGTCATTTGAGAACACTCTAGTCACCAAATTTTTTGGTCTACATTGTGTAAAGTTAGCTGGAGCTAACCAAAAGAAGGTTCGTTTCGTCATCATGGGAAACTTGTTTTGTTCTGATTATTCCATTCATAGACGATTTGATCTGAAAGGCTCATCACTTGGACGTACAACTGACAAGCCACAAACAGAAATTGACGAATACACTACTTTGAAAGACCTCGATCTTAACTTTATCTTTCGATTGCAAAAACACTGGCACCAAGAGTTCCTAAGACAAGTCGATAAGGACTGCGACTTTCTTGAGCAAGAGAACATCATGGACTACAGTCTTTTGGTGGGTGTACATTTCAGAGACAAAAGAAATCTATTAGCAAGTGAAGGTTCCTTTGATAGTGATAGTAGCAGAGCGTCATCGCCTCACCTGTCTAGAGGAGATACTGATCCAAACAGGTTTTCGAAGATAAAACTTGGGTCCAACATGCCAACAAGAGCTGAGCTAACAGTACGAAAGAGTGAGTGCGAGCCTCAGATCATCGGAGAGCCTACTGGGGAGTTCTACGATGTTATACTATATTTTGGGATTATAGACATCCTTCAAGACTACGATATCAGCAAAAAGCTTGAGCATGCATACAAGTCCTTTCAGTATGACCCAACATCTATTTCAGCAGTAGATCCGAAACAGTATTCCAGACGCTTCAAAGATTTTGTGTACAAAGCGTTCCAAGAAGAGAAGATAGACATCTGAAAACACATTGGGACTCCAGAGCTACCGCAGCTGCCGACATAGATGCTGGTCATATTTCAGCAGGTTTGATGCCTCTACTTGTATATGATCAAGCAGAAGCCATCAGGCTGATCAAGGCCCTGCTTGCAGACCCCCAAGGAATTCAGATGGCTCCGATTGGGACAATGGTGCTTTTCAATAATCTCAGATTCAACAGTCTTTTCTTCCCCTGAAAAATAGACACAGCTTCCTATCTACAGCTACTTTGTTACAATGGCCAGTCTAGCATAGCACATCAATGCCAAGCTATGCCTAAATATAGCTATATACATGCATATAGAATCCACTAATGTTAGTGTAGATGCTGACTTGAAGATTCATTCTTTTTTTTGGCACACTTGAAGATTCAACTTACAGAGAGAAGTTTGTAGTGACAAAGTTCAGAGATGTAAATGTTTTATGAGATAACATGTCGCTATCCTCTTGTTTATGTGTGTTATTAACGAGGGCATATTCGCCTTATGTAACTCATATGAATCATTCTAAAGTCCATAACTTTAGGAGATTCTTCACTGTTGAAGTCAATGGCATGCAGGAATATCTGAGACTGACAC]

[+] EMBL AK111845             [TGGGGGCACCACGTGCGGCATTGCGGTGGTGGTGGTGGTGGTGGCGGAGGAGGCCGAGGTGCGGGTGCGGGGGAGGAGGAGGAGGAGGTGGAGGAGGAGGAGGAGGAGGAGGCGGGCCGCAGCGACGGTGAGGGTGGAGGACGCCGGCGAGGTGAGGGGGCTGCCGCCGCCGTCGCCGGCGACGGGGCCGCACGCCGGCGGCGGTAGGTCGCGCGGGGCGCGGCGGCAGGGGGAGACCATCGCCAAGGGCCACAAGAACTATGAGCTTATGCTCAACCTCCAGCTCGGCATCAGACATGCAGTAGGAAAACAAGGCCCGATTACGCTTGATTTGAAGTCATCAGCTTTTGACCCAAAGGAGAAAGTATGGACAAGGTTTCCTCCAGAAGGATCAAAGTACACCCCTCCTCACAGTTCTTGCGATTTCAAATGGAAAGATTACTGCCCGCAAGTGTTCCGGACACTACGCAAGTTATTCAAGGTTGATGCGGCAGATTATATGTTGTCCCTTTGTGGTGATCAGGCTCTCCGGGAGCTCTCATCCCCCGGTAAGAGTGGAAGCTTCTTTTATCTCACGAGCAATGATCAGTACATGATAAAGACGATGAAGAAATCTGAAGTAAAGATATTTCTTAAGATGCTTCGAGCTTACTACAATCATGTTCGGTCATTTGAGAACACTCTAGTCACCAAATTTTTTGGTCTACATTGTGTAAAGTTAGCTGGAGCTAACCAAAAGAAGGTTCGTTTCGTCATCATGGGAAACTTGTTTTGTTCTGATTATTCCATTCATAGACGATTTGATCTGAAAGGCTCATCACTTGGACGTACAACTGACAAGCCACAAACAGAAATTGACGAATACACTACTTTGAAAGACCTCGATCTTAACTTTATCTTTCGATTGCAAAAACACTGGCACCAAGAGTTCCTAAGACAAGTCGATAAGGACTGCGACTTTCTTGAGCAAGAGAACATCATGGACTACAGTCTTTTGGTGGGTGTACATTTCAGAGACAAAAGAAATCTATTAGCAAGTGAAGGTTCCTTTGATAGTGATAGTAGCAGAGCGTCATCGCCTCACCTGTCTAGAGGAGATACTGATCCAAACAGGTTTTCGAAGATAAAACTTGGGTCCAACATGCCAACAAGAGCTGAGCTAACAGTACGAAAGAGTGAGTGCGAGCCTCAGATCATCGGAGAGCCTACTGGGGAGTTCTACGATGTTATACTATATTTTGGGATTATAGACATCCTTCAAGACTACGATATCAGCAAAAAGCTTGAGCATGCATACAAGTCCTTTCAGTATGACCCAACATCTATTTCAGCAGTAGATCCGAAACAGTATTCCAGACGCTTCAAAGATTTTGTGTACAAAGCGTTCCAAGAAGAGAAGATAGACATCTGAAAACACATTGGGACTCCAGAGCTACCGCAGCTGCCGACATAGATGCTGGTCATATTTCAGCAGGTTTGATGCCTCTACTTGTATATGATCAAGCAGAAGCCATCAGGCTGATCAAGGCCCTGCTTGCAGACCCCCAAGGAATTCAGATGGCTCCGATTGGGACAATGGTGCTTTTCAATAATCTCAGATTCAACAGTCTTTTCTTCCCCTGAAAAATAGACACAGCTTCCTATCTACAGCTACTTTGTTACAATGGCCAGTCTAGCATAGCACATCAATGCCAAGCTATGCCTAAATATAGCTATATACATGCATATAGAATCCACTAATGTTAGTGTAGATGCTGACTTGAAGATTCATTCTTTTTTTTGGCACACTTGAAGATTCAACTTACAGAGAGAAGTTTGTAGTGACAAAGTTCAGAGATGTAAATGTTTTATGAGATAACATGTCGCTATCCTCTTGTTTATGTGTGTTATTAACGAGGGCATATTCGCCTTATGTAACTCATATGAATCATTCTAAAGTCCATAACTTTAGGAGATTCTTCACTGTTGAAGTCAATGGCATGCAGGAATATCTGAGACTGACAC]
[+] EMBL CB096990             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GATGTTATACTATATTTTGGGATTATAGACATCCTTCAAGACTACGATATCAGCAAAAAGCTTGAGCATGCATACAAGTCCTTTCAGTATGACCCAACATCTATTTCAGCAGTAGATCCGAAACAGTATTCCAGACGCTTCAAAGATTTTGTGTACAAAGCGTTCCAAGAAGAGAAGATAGACATCTGAAAACACATTGGGACTCCAGAGCTACCGCAGCTGCCGACATAGATGCTGGTCATATTTCAGCAGGTTTGATGCCTCTACTTGTATATGATCAAGCAGAAGCCATCAGGCTGATCAAGGCCCTGCTTGCAGACCCCCAAGGAATTCAGATGGCTCCGATTGGGACAATGGTGCTTTTCAATAATCTCAGATTCAACAGTCTTTTCTTCCCCTGAAAAATAGACACAGCTTCCTATCTACAGCTACTTTGTTACAATGGCCAGTCTAGCATAGCACATCAATGCCAAGCTATGCCTAAATATAGCTATATACATGCATATAGAATCCACTAATGTTAGTGTAGATGCTGACTTGAAGATTCATTCTTTTTTTTGGCACACTTGAAGATTCAACTTACAGAGAGAAGTTTGTAGTGACAAAGNTCAGAGATGTAAATGGTTTA                                                                                                                                                          ]




>consensus_1440#0
TGGGGGCACCACGTGCGGCATTGCGGTGGTGGTGGTGGTGGTGGCGGAGGAGGCCGAGGT
GCGGGTGCGGGGGAGGAGGAGGAGGAGGTGGAGGAGGAGGAGGAGGAGGAGGCGGGCCGC
AGCGACGGTGAGGGTGGAGGACGCCGGCGAGGTGAGGGGGCTGCCGCCGCCGTCGCCGGC
GACGGGGCCGCACGCCGGCGGCGGTAGGTCGCGCGGGGCGCGGCGGCAGGGGGAGACCAT
CGCCAAGGGCCACAAGAACTATGAGCTTATGCTCAACCTCCAGCTCGGCATCAGACATGC
AGTAGGAAAACAAGGCCCGATTACGCTTGATTTGAAGTCATCAGCTTTTGACCCAAAGGA
GAAAGTATGGACAAGGTTTCCTCCAGAAGGATCAAAGTACACCCCTCCTCACAGTTCTTG
CGATTTCAAATGGAAAGATTACTGCCCGCAAGTGTTCCGGACACTACGCAAGTTATTCAA
GGTTGATGCGGCAGATTATATGTTGTCCCTTTGTGGTGATCAGGCTCTCCGGGAGCTCTC
ATCCCCCGGTAAGAGTGGAAGCTTCTTTTATCTCACGAGCAATGATCAGTACATGATAAA
GACGATGAAGAAATCTGAAGTAAAGATATTTCTTAAGATGCTTCGAGCTTACTACAATCA
TGTTCGGTCATTTGAGAACACTCTAGTCACCAAATTTTTTGGTCTACATTGTGTAAAGTT
AGCTGGAGCTAACCAAAAGAAGGTTCGTTTCGTCATCATGGGAAACTTGTTTTGTTCTGA
TTATTCCATTCATAGACGATTTGATCTGAAAGGCTCATCACTTGGACGTACAACTGACAA
GCCACAAACAGAAATTGACGAATACACTACTTTGAAAGACCTCGATCTTAACTTTATCTT
TCGATTGCAAAAACACTGGCACCAAGAGTTCCTAAGACAAGTCGATAAGGACTGCGACTT
TCTTGAGCAAGAGAACATCATGGACTACAGTCTTTTGGTGGGTGTACATTTCAGAGACAA
AAGAAATCTATTAGCAAGTGAAGGTTCCTTTGATAGTGATAGTAGCAGAGCGTCATCGCC
TCACCTGTCTAGAGGAGATACTGATCCAAACAGGTTTTCGAAGATAAAACTTGGGTCCAA
CATGCCAACAAGAGCTGAGCTAACAGTACGAAAGAGTGAGTGCGAGCCTCAGATCATCGG
AGAGCCTACTGGGGAGTTCTACGATGTTATACTATATTTTGGGATTATAGACATCCTTCA
AGACTACGATATCAGCAAAAAGCTTGAGCATGCATACAAGTCCTTTCAGTATGACCCAAC
ATCTATTTCAGCAGTAGATCCGAAACAGTATTCCAGACGCTTCAAAGATTTTGTGTACAA
AGCGTTCCAAGAAGAGAAGATAGACATCTGAAAACACATTGGGACTCCAGAGCTACCGCA
GCTGCCGACATAGATGCTGGTCATATTTCAGCAGGTTTGATGCCTCTACTTGTATATGAT
CAAGCAGAAGCCATCAGGCTGATCAAGGCCCTGCTTGCAGACCCCCAAGGAATTCAGATG
GCTCCGATTGGGACAATGGTGCTTTTCAATAATCTCAGATTCAACAGTCTTTTCTTCCCC
TGAAAAATAGACACAGCTTCCTATCTACAGCTACTTTGTTACAATGGCCAGTCTAGCATA
GCACATCAATGCCAAGCTATGCCTAAATATAGCTATATACATGCATATAGAATCCACTAA
TGTTAGTGTAGATGCTGACTTGAAGATTCATTCTTTTTTTTGGCACACTTGAAGATTCAA
CTTACAGAGAGAAGTTTGTAGTGACAAAGTTCAGAGATGTAAATGTTTTATGAGATAACA
TGTCGCTATCCTCTTGTTTATGTGTGTTATTAACGAGGGCATATTCGCCTTATGTAACTC
ATATGAATCATTCTAAAGTCCATAACTTTAGGAGATTCTTCACTGTTGAAGTCAATGGCA
TGCAGGAATATCTGAGACTGACAC
clustalw multiple alignements is not computed in this case