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Oryza sativa
cluster # 14404 cluster # 14404       Sequences # 16       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14404#0 length = 1599 sequences # 15  
consensus_14404#1 length = 252 sequences # 1  

consensusID : consensus_14404#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1599
fasta sequence
                              [TGGACTGAAGGAGTAGAAACCTCCTCATCGGCTTCGGCTCCGACCGCGACGACACGAGACTTTTCCTGCCTCCGCCGCCGGTCTCGGCGTGGTGCCCTGAGGCGGCGAGGCCGCCGT-GAGATCTCAGCTCCGCCGCCCGTGGGAATCGAGCTCCGGCCCCGTGCCTTTTCCTGCCCCCCCAGCTGAAAAATGGGGAGGATACCGTCTCTGAAAAATTTCAATGCCTTCCCCCATGCGGAAGACCACTTACTAAAGAAGACTTACTCTGGTGCTATCGTCACGATTTTCGGACTAATTATAATGGTTACGTTATTTGCGCACGAGCTCAAATTTTATCTTACCACCTATACTGTTCATCAGATGTCTGTAGATCTGAAACGAGGAGAAACTCTGCCAATTCATATAAATATGTCATTTCCCTCTCTACCATGTGAAGTCTTGAGTGTGGATGCAATTGACATGTCTGGCAAGCATGAAGTGGACTTGCATACAAATATTTGGAAGCTTCGCTTGGATAAGTATGGCCATATCATTGGTACGGAGTATTTAAATGATCTAGTTGAGAAGGAGCATGGGACTCACAATCATGATCATGACCATGAGCATGAAGATGAACAAAAGAAGCAAGAGCACACCTTTAATGAAGATGCAGAAAAAATGGTTAAGAGTGTGAAACAAGCAATGGAAAATGGTGAAGGGTGCCGAGTTTATGGTGTTCTAGATGTGCAGAGGGTTGCTGGTAACTTCCATATCTCGGTTCATGGTTTGAACATTTTTGTTGCTGAGAAGATTTTTGATGGGTCAAGCCATGTGAACGTCAGTCATATCATCCATGATCTATCCTTTGGTCCAAAATATCCTGGAATTCATAATCCACTGGATGAGACTACAAGGATACTCCATGATACAAGTGGGACCTTCAAATACTATATCAAGATTGTTCCAACCGAGTACAGATACCTCTCAAAGCAGGTGTTGCCAACAAATCAGTTTTCTGTCA-CCGAGTATTTTGTTCCTAAACGC-GCTACTG-ATAGGTCCGCGTGGCCAGCTGTGTACTTCTTGTATGATCTCTCACCAATTACA-GTCACAATCA-A-AGAAGAAAGAAGGAACTTCCTGCATTTCCTCACCCGACTATGTGCAGTTCTTGGCGGTACCTTTGCAATGACAGGAATGCTTGACCGATGGATGTACCGGCTTATTGAGTCTGTCA-CA-AAATCAAAGACCAGAA-GCGTACTA-CGGTAATTGCGCATCA-CATGATAAGTGGAGGCAAACTGTGA-CAACCCTGTGTGTTGTCA-CTGGTCATACAAAT--CAG-TCAGAGCATATCGTCTCAGAT-A-CGGTCAACCCCA-GTGGGTTTTCATGTTTTGATATGCTCTATGGCTC-GATTGCTTAAAATACTTATGTTGTTAGCTTTGTCATTAATCACTCATGTTAGACTGG-CA-CGGACTCATAACA-GTTTTGTAATCAATGATTCCCACAAATCGGAGGTGCCAACGTCGTGTGATCATGGAGAAACAAATCCCAGTATAGCCTGATAATTCCAAAAAAGCAGGAAAAAAATCAACATATAAAACTTTGATACTCTTGCATCAAAAAAAAAAA]

[+] EMBL CF280934             [TGGACTGAAGGAGTAGAAACCTCCTCATCGGCTTCGGCTCCGACCGCGACGACACGAGACTTTTCCTGCCTCCGCCGCCGGTCTCGGCGTGG GCCCTGAGGCGGCGAGGCCGCCGT GAGATCTCAGCTCCGCCGCCCGTGGGAATCGAGCTCCGGCCCCGTGCCTTTTCCTGCCCCCCCAGCTGAAAAATGGGGAGGATACCGTCTCTGAAAAATTTCAATGCCTTCCCCCATGCGGAAGACCACTTACTAAAGAAGACTTACTCTGGTGCTATCGTCACGATTTTCGGACTAATTATAATGGTTACGTTATTTGCGCACGAGCTCAAATTTTATCTTACCACCTATACTGTTCATCAGATGTCTGTAGATCTGAAACGAGGAGAAACTCTGCCAATTCATATAAATATGTCATTTCCCTCTCTACC TGTGAAGTCTTGAGTGTGGATGCAATTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CF280500             [                           TCGGCTTCGGCTCCGACCGCGACGACACGAGACTTTTCCTGCCTCCGCCGCCGGTCTCGGCGTGG GCCCTGAGGCGGCGAGGCCGCCGT GAGATCTCAGCTCCGCCGCCCGTGGGAATCGAGCTCCGGCCCCGTGCCTTTTCCTGCCCCCCCAGCTGAAAAATGGGGAGGATACCGTCTCTGAAAAATTTCAATGCCTTCCCCCATGCGGAAGACCACTTACTAAAGAAGACTTACTCTGGTGCTATCGTCACGATTTTCGGACTAATTATAATGGTTACGTTATTTGCGCACGAGCTCAAATTTTATCTTACCACCTATACTGTTCATCAGATGTCTGTAGATCTGAAACGAGGAGAAACTCTGCCAATTCATATAAATATGTCATTTCCCTCTCTACCATGTGAAGTCTTGAGTGTGGATGCAATTGACATGTCTGGCAAGCATGAAGTGGACTTGCATACAAATATTTGGAAGCTTCGCTTGGATAAGTATGGCCATATCATTGGTACGGAGTATTTAAATGATCTAGTTGAGAAGGAGCATGGGACTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL C26275               [                                  CGGCTCCGACCGCNACGACACGAGACTTTTCCTGCCTCCGCCGCCGGTCTCGG GTGGTGCCCTGAGGCGGCGAGGCCG CGTNNAGATCTCAGCTCCGCCGCCCGTGGGAATCGAGCTCCGGCCCCGTGCCTTTTCCTGCCCCCCCAGCTGAAAAATGGGGAGGATACCGTCTCTGAAAAATTTCAATGCCTTCCCCCATGCGGAAGACCACTTACTAAAGAAGACTTACTCTGGTGCTATCGTCACGATTTTCGGACTAATTATAATGGTTACGTTATTTGCGCACGAGCTCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AK103474             [                                                     ACGAGACTTTTCCTGCCTCCGCCGCCGGTCTCGGCGTGGTGCCCTGAGGCGGCGAGGCCGCCGT GAGATCTCAGCTCCGCCGCCCGTGGGAATCGAGCTCCGGCCCCGTGCCTTTTCCTGCCCCCCCAGCTGAAAAATGGGGAGGATACCGTCTCTGAAAAATTTCAATGCCTTCCCCCATGCGGAAGACCACTTACTAAAGAAGACTTACTCTGGTGCTATCGTCACGATTTTCGGACTAATTATAATGGTTACGTTATTTGCGCACGAGCTCAAATTTTATCTTACCACCTATACTGTTCATCAGATGTCTGTAGATCTGAAACGAGGAGAAACTCTGCCAATTCATATAAATATGTCATTTCCCTCTCTACCATGTGAAGTCTTGAGTGTGGATGCAATTGACATGTCTGGCAAGCATGAAGTGGACTTGCATACAAATATTTGGAAGCTTCGCTTGGATAAGTATGGCCATATCATTGGTACGGAGTATTTAAATGATCTAGTTGAGAAGGAGCATGGGACTCACAATCATGATCATGACCATGAGCATGAAGATGAACAAAAGAAGCAAGAGCACACCTTTAATGAAGATGCAGAAAAAATGGTTAAGAGTGTGAAACAAGCAATGGAAAATGGTGAAGGGTGCCGAGTTTATGGTGTTCTAGATGTGCAGAGGGTTGCTGGTAACTTCCATATCTCGGTTCATGGTTTGAACATTTTTGTTGCTGAGAAGATTTTTGATGGGTCAAGCCATGTGAACGTCAGTCATATCATCCATGATCTATCCTTTGGTCCAAAATATCCTGGAATTCATAATCCACTGGATGAGACTACAAGGATACTCCATGATACAAGTGGGACCTTCAAATACTATATCAAGATTGTTCCAACCGAGTACAGATACCTCTCAAAGCAGGTGTTGCCAACAAATCAGTTTTCTGTCA CCGAGTATTTTGTTCCTAAACGC GCTACTG ATAGGTCCGCGTGGCCAGCTGTGTACTTCTTGTATGATCTCTCACCAATTACA GTCACAATCA A AGAAGAAAGAAGGAACTTCCTGCATTTCCTCACCCGACTATGTGCAGTTCTTGGCGGTACCTTTGCAATGACAGGAATGCTTGACCGATGGATGTACCGGCTTATTGAGTCTGTCA CA AAATCAAAGACCAGAA GCGTACTA CGGTAATTGCGCATCA CATGATAAGTGGAGGCAAACTGTGA CAACCCTGTGTGTTGTCA CTGGTCATACAAAT  CAG TCAGAGCATATCGTCTCAGAT A CGGTCAACCCCA GTGGGTTTTCATGTTTTGATATGCTCTATGGCTC GATTGCTTAAAATACTTATGTTGTTAGCTTTGTCATTAATCACTCATGTTAGACTGG CA CGGACTCATAACA GTTTTGTAATCAATGATTCCCACAAATCGGAGGTGCCAACGTCGTGTGATCATGGAGAAACAAATCCCAGTATAGCCTGATAATTCCAAAAAAGCAGGAAAA                                             ]
[+] EMBL CF300625             [                                                                     CTCCGCCGCCGGTCTCGGCGTGGTGCCCTGAGGCGGCGAGGCCGCCGT GAGATCTCAGCTCCGCCGCCCGTGGGAATCGAGCTCCGGCCCCGTGCCTTTTCCTGCCCCCCCAGCTGAAAAATGGGGAGGATACCGTCTCTGAAAAATTTCAATGCCTTCCCCCATGCGGAAGACCACTTACTAAAGAAGACTTACTCTGGTGCTATCGTCACGATTTTCGGACTAATTATAATGGTTACGTTATTTGCGCACGAGCTCAAATTTTATCTTACCACCTATACTGTTCATCAGATGTCTGTAGATCTGAAACGAGGAGAAACTCTGCCAATTCATATAAATATGTCATTTCCCTCTCTACCATGTGAAGTCTTGAGTGTGGATGCAATTGACATGTCTGGGCAGCATGAAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CA305861             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTAAATGATCTAGTTGAGAAGGAGCATGGGACTCACAATCATGATCATGACCATGAGCATGAAGATGAACAAAAGAAGCAAGAGCACACCTTTAATGAAGATGCAGAAAAAATGGTTAAGAGTGTGAAACAAGCAATGGAAAATGGTGAAGGGTGCCGAGTTTATGGTGTTCTAGATGTGCAGAAGGTTGCTGGTAACTTCCATATCTCGGTTCATGGTTTGAACATTTTTGTTGCTGAGAAGATTTTTGATGGGTCAAGCCATGTGAACGTCAGTCATATCATCCATGATCTATCCTTTGGTCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CA759242             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGATCCAAGTGGGACCTTCAAATACTATATCAAGATTGTTCCAACCGAGTCCAGAT CCTCTCAAAGCAGGTG TGCCAACAAATCAGTTTTCTGTCA CCGAGTATTTTGTTCCTAAACGC GCTACTG ATAGGTCCGCGTGGCCAGCTGTGTACTTCTTGTATGATCTCTCACCAATTACA GTCCCAATCA A AGAAGAAAGAAGGAACTTCCTGCATTTCCTCACCCGACTATGTGCAGTTCTTGGCGGTACCTTTGCAATGACAGGAATGCTTGACCGATGGATGTACCGGCTTATTGAGTCTGTCA CA AAATCAAAGACCAGAA GCGTACTA CGGTAATTGCGCATCA CATGATAAGTGGAGGCAAACTGTGA CAACCCTGTGTGTTGTCA CTGGTCATACAAAT  CAG TCAGAGCATATCGTCTCAGAT A CGGTCAACCCCA GTGGGTTTTCATGTTTTGATATGCTCTATGGCTC GATTGCTTAAAATACTTATGTTGTTAGCTTTGTCATTAATCACTCATGTTAGACTGG CA CGGACTCATAACA GTTTTGTAATCAATGATTCCCACAAATTGGAGGTGCCAACGTCGTGTGATCATGGAGAAACAAATCCCAGTATAGCCTGATAATTCCAAAAAAACAGAAAAAAAATCAACATATAAAACTTTGATACTCTTGCATCAAAAAAAAAAA]
[+] EMBL AK062053             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AGATTGTTCCAACCGAGTACAGATACCTCTCAAAGCAGGTGTTGCCAACAAATCAGTTTTCTGTCA CCGAGTATTTTGTTCCTAAACGC GCTACTG ATAGGTCCGCGTGGCCAGCTGTGTACTTCTTGTATGATCTCTCACCAATTACA GTCACAATCA A AGAAGAAAGAAGGAACTTCCTGCATTTCCTCACCCGACTATGTGCAGTTCTTGGCGGTACCTTTGCAATGACAGGAATGCTTGACCGATGGATGTACCGGCTTATTGAGTCTGTCA CA AAATCAAAGACCAGAA GCGTACTA CGGTAATTGCGCATCA CATGATAAGTGGAGGCAAACTGTGA CAACCCTGTGTGTTGTCA CTGGTCATACAAAT  CAG TCAGAGCATATCGTCTCAGAT A CGGTCAACCCCA GTGGGTTTTCATGTTTTGATATGCTCTATGGCTC GATTGCTTAAAATACTTATGTTGTTAGCTTTGCCATTAATCACTCATGTTAGACTGG CA CGGACTCATAACA GTTTTGTAATCAA                                                                                                                                      ]
[+] EMBL BQ908015             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GTTCCAACCGAGTACGGATACCTCTCAAANCAGGTGTGCCCCAC AATC GTTTTCTGTCACCCGAGTATTTTGTTCCTAAACGC GCTACTGTATAGGTCCGCGTGGCCAGCTGTGTACTTCTTGTATGATCTCTCACCAATTACA GTCACAATCA A AGAAGAAAGAAGGAACTTCCTGCATTTCCTCACCCGACTATGTNCAGTTCTTGGCGGTACCTTTGCAATGACAGGAATGCTTGACCGATGGATGTACCGGCTTATTGAGTCTGTCACCACAAATCNAAGACCAGAA GCGTACTACCGGTAATTGCGCATCACCATGATAAGTGGAGNCCAACTGTGACCAACCCTGTGTGTTGTCACCTGGTCATACAAAT  CAG TCAGAGCATATCGTCTCAGAT ACCGGTCAACCCCACGTGGGTTTTCATGTTTTGATATGCTCTATGGCTC GATTGCTTAAAATACTTATGTTGTTAGCTTTGTCATTAATCACTCATGTTAGACTGGCCACCGGACTCATAACACGTTTTGTAATCAATGATTCCC CCAATCGGAGGTGCCAACGTCGTGTGATCATGGAGAAACCAAaaaaaaaa                                                                           ]
[+] EMBL BI797133             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  tggtTTCCTAAACGCGGCTACTG ATA GTCCGCGT GCCA CTGTGTACTTCTTGTATGATCTCTCACCAATTACA GTCACAATCA A AGAAGAAAGAAGGAACTTCCTGCATTTCCTCACCCGACTATGTGCAGTTCTTGCCGGTACCTTTGCAATGACAGGAATGCTTGACCGATGGATGTACCGGCTTATTGAGTCTGTCA CC AAATCCAAGACCAGAA GCGTACTACCGGTAATTGCGCATCA CATGATAAGTGGA GCAAACTGTGA CAACCCTGTGTCTTGTCA CTGGTCATACAAAT  CAG TCAGAGCATATCGTCTCAGATCA CGGTCAACCCCA GTGGGTTTTCAT TTTTGATATGCTCTATGGCTCAGATTGCTTAAAATACTTATGTT TTACCTTTGTCATTAATCACTCATGTTAGACT G CC CGGACTCATAACA  TTTTGTAATCAAaaa                                                                                                                                   ]
[+] EMBL BI805175             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ACGC GCTACTG ATAGGTCCGCGTGGCCAGCTGTGTACTTCTTGTATGATCTCTCCCCCATTACAGGTCAC ATCACAGAGAAGAAAGAAGGAACTTCCTGCATTTCCTCACCCGACTATGT CAGTTCTTGGCGGTACCTTTGCAATGACAGGAATGCTTGACCGATGGATGTACCGGCTTATTGAGTCTGTCA C  AAATC AAGACCAGAA GCGTACTA CGGTAATTGCGCATCA CATGATAAGTGGAGGCAAACTGTGA CAACCCTGTGTGTTGTCA CTGGTCATACAAAT  CAG TCAGAGCATATCGTCTCAGAT A CGGTCAACCCCC GTGGGTTTTCATGTTTTGATATGCTCTATGGCTC GATTGCTTAAAATACTTATGTTGTTAGCTTTGTCATTAATCACTCATGTTAGACTGG CA CGGACTCATAACA GTTTTGTAATC ATGATTCCCACCAAaaaaaaaa                                                                                                                 ]
[-] EMBL CF280935             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CTTCTTGTATGATCTCTCACCAATTACA GTCACAATCA A AGAAGAAAGAAGGAACTTCCTGCATTTCCTCACCCGACTATGTGCAGTTCTTGGCGGTACCTTTGCAATGACAGGAATGCTTGACCGATGGATGTACCGGCTTATTGAGTCTGTCA CA AAATCAAAAAACAGAA GCGTACTA CGGTAATTGCGCATCA CATGATAAGTGGAAAAAAACTGTGA CAACCCTGTGTGTTGTCA CTGGTCATACAAAT  CAG TCAGAGCATATCGTCTCAGAT A CGGTCAACCCCA GTGGGTTTTCATGTTTTGATATGCTCTATGGCTC GATTGCTTAAAATAGTTATGTTGTTAGCTT                                                                                                                                                                                                ]
[-] EMBL CF280501             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TCTTGTATGATCTCTCACCAATTACA GTCACAATCA A AGAAGAAAGAAGGAACTTCCTGCATTTCCTCACCCGACTATGTGCAGTTCTTGGCGGTACCTTTGCAATGACAGGAATGCTTGACCGATGGATGTACCGGCTTATTGAGTCTGTCA CA AAATCAAAAACAAAAA GCGTACTA CGGTAATTGCGCATCA CATGATAAGTGGAAAAAAAATGTGA CAACCCTGTGTGTTGTCA CTGGTCATACAAAT  CAG TCAGAGCATATCGTCTCAGAT A CGGTCAACCCCA GTGGGTTTTCATGTTTTGATATGCTCTATGGCTC GATTGC                                                                                                                                                                                                                        ]
[+] EMBL AU100683             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TTCTTGGCGGTACCTTTGCAATGACAGGAATGCTTGACCGATGGATGTACCGGCTTATTGAGTCTGTCA C  AAATCAAGGCCCGGAAGGCGTATTN CGGTAATTGCGCATCA CATGATAAGTGGAGGCAAACTGTGA CAACCCTGTGTGTTGTCA CTGGTCATACAAAT  CAG TCAGAGCATATCGTCTCAGAT A CGGTCAACCCCA GTGGGTTTTCATGTTTTGATATGCTCTATGGCTC GATTGCTTAAAATACTTATGTTGTTAGCTTTGTCATTAATCACTCATGTTAGACTGG CA CGGACTCATAACA GTTTTGTAATCAATGATTCCCACAAAaaaaaaaa                                                                                                                 ]
[-] EMBL CF300624             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGAA GCGTACTA CGGTAATTGCGCATCA CATGATAAGTGGAGGCAAACTGTGA CAACCCTGTGTGTTGTCA CTGGTCATACAAATCCCAGCTCAGAGCATATCGTCTCAGAT A CGGTCAACCCCA GTGGGTTTTCATGTTTTGATATGCTCTATGGCTC GATTGCTTAAAATACTTATGTTGTTAGCTTTGTCATTAATCACTCATGTTAGACTGG CA CGGACTCATAACA GTTTTGTAATCAATGATTCCCACAAAa                                                                                                                        ]


>consensus_14404#0 TGGACTGAAGGAGTAGAAACCTCCTCATCGGCTTCGGCTCCGACCGCGACGACACGAGAC TTTTCCTGCCTCCGCCGCCGGTCTCGGCGTGGTGCCCTGAGGCGGCGAGGCCGCCGTGAG ATCTCAGCTCCGCCGCCCGTGGGAATCGAGCTCCGGCCCCGTGCCTTTTCCTGCCCCCCC AGCTGAAAAATGGGGAGGATACCGTCTCTGAAAAATTTCAATGCCTTCCCCCATGCGGAA GACCACTTACTAAAGAAGACTTACTCTGGTGCTATCGTCACGATTTTCGGACTAATTATA ATGGTTACGTTATTTGCGCACGAGCTCAAATTTTATCTTACCACCTATACTGTTCATCAG ATGTCTGTAGATCTGAAACGAGGAGAAACTCTGCCAATTCATATAAATATGTCATTTCCC TCTCTACCATGTGAAGTCTTGAGTGTGGATGCAATTGACATGTCTGGCAAGCATGAAGTG GACTTGCATACAAATATTTGGAAGCTTCGCTTGGATAAGTATGGCCATATCATTGGTACG GAGTATTTAAATGATCTAGTTGAGAAGGAGCATGGGACTCACAATCATGATCATGACCAT GAGCATGAAGATGAACAAAAGAAGCAAGAGCACACCTTTAATGAAGATGCAGAAAAAATG GTTAAGAGTGTGAAACAAGCAATGGAAAATGGTGAAGGGTGCCGAGTTTATGGTGTTCTA GATGTGCAGAGGGTTGCTGGTAACTTCCATATCTCGGTTCATGGTTTGAACATTTTTGTT GCTGAGAAGATTTTTGATGGGTCAAGCCATGTGAACGTCAGTCATATCATCCATGATCTA TCCTTTGGTCCAAAATATCCTGGAATTCATAATCCACTGGATGAGACTACAAGGATACTC CATGATACAAGTGGGACCTTCAAATACTATATCAAGATTGTTCCAACCGAGTACAGATAC CTCTCAAAGCAGGTGTTGCCAACAAATCAGTTTTCTGTCACCGAGTATTTTGTTCCTAAA CGCGCTACTGATAGGTCCGCGTGGCCAGCTGTGTACTTCTTGTATGATCTCTCACCAATT ACAGTCACAATCAAAGAAGAAAGAAGGAACTTCCTGCATTTCCTCACCCGACTATGTGCA GTTCTTGGCGGTACCTTTGCAATGACAGGAATGCTTGACCGATGGATGTACCGGCTTATT GAGTCTGTCACAAAATCAAAGACCAGAAGCGTACTACGGTAATTGCGCATCACATGATAA GTGGAGGCAAACTGTGACAACCCTGTGTGTTGTCACTGGTCATACAAATCAGTCAGAGCA TATCGTCTCAGATACGGTCAACCCCAGTGGGTTTTCATGTTTTGATATGCTCTATGGCTC GATTGCTTAAAATACTTATGTTGTTAGCTTTGTCATTAATCACTCATGTTAGACTGGCAC GGACTCATAACAGTTTTGTAATCAATGATTCCCACAAATCGGAGGTGCCAACGTCGTGTG ATCATGGAGAAACAAATCCCAGTATAGCCTGATAATTCCAAAAAAGCAGGAAAAAAATCA ACATATAAAACTTTGATACTCTTGCATCAAAAAAAAAAA



consensusID : consensus_14404#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 252
fasta sequence
                              [ACCAAACCAGTTTCTGTCACCGAGTATTTGTGTTCCTAACGCGCTACTGATAGTCCGCGTGCCACCTGTGTACTTCTGGTATGATCTCTCACCAATTACAGTCACATCAAGAAGAAAGAAGGAACTTCCGCATTTCCTCACCCGACCTATGTCCCAAGTTCTTGCCGGTACCTTTCCAATGACAGGAATGCTTGACCGATGGATGTACCGGCTTATTGAGTCTGTCACAAATCAAAGACCAGAAGCGTACTC]

[+] EMBL BI809559             [ACCAAACCAGTTTCTGTCACCGAGTATTTGTGTTCCTAACGCGCTACTGATAGTCCGCGTGCCACCTGTGTACTTCTGGTATGATCTCTCACCAATTACAGTCACATCAAGAAGAAAGAAGGAACTTCCGCATTTCCTCACCCGACCTATGTCCCAAGTTCTTGCCGGTACCTTTCCAATGACAGGAATGCTTGACCGATGGATGTACCGGCTTATTGAGTCTGTCACAAATCAAAGACCAGAAGCGTACTC]


>consensus_14404#1 ACCAAACCAGTTTCTGTCACCGAGTATTTGTGTTCCTAACGCGCTACTGATAGTCCGCGT GCCACCTGTGTACTTCTGGTATGATCTCTCACCAATTACAGTCACATCAAGAAGAAAGAA GGAACTTCCGCATTTCCTCACCCGACCTATGTCCCAAGTTCTTGCCGGTACCTTTCCAAT GACAGGAATGCTTGACCGATGGATGTACCGGCTTATTGAGTCTGTCACAAATCAAAGACC AGAAGCGTACTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14404#0      TGGACTGAAGGAGTAGAAACCTCCTCATCGGCTTCGGCTCCGACCGCGACGACACGAGAC 60
consensus_14404#1      ------------------------------------------------------------
                                                                                   

consensus_14404#0      TTTTCCTGCCTCCGCCGCCGGTCTCGGCGTGGTGCCCTGAGGCGGCGAGGCCGCCGTGAG 120
consensus_14404#1      ------------------------------------------------------------
                                                                                   

consensus_14404#0      ATCTCAGCTCCGCCGCCCGTGGGAATCGAGCTCCGGCCCCGTGCCTTTTCCTGCCCCCCC 180
consensus_14404#1      ------------------------------------------------------------
                                                                                   

consensus_14404#0      AGCTGAAAAATGGGGAGGATACCGTCTCTGAAAAATTTCAATGCCTTCCCCCATGCGGAA 240
consensus_14404#1      ------------------------------------------------------------
                                                                                   

consensus_14404#0      GACCACTTACTAAAGAAGACTTACTCTGGTGCTATCGTCACGATTTTCGGACTAATTATA 300
consensus_14404#1      ------------------------------------------------------------
                                                                                   

consensus_14404#0      ATGGTTACGTTATTTGCGCACGAGCTCAAATTTTATCTTACCACCTATACTGTTCATCAG 360
consensus_14404#1      ------------------------------------------------------------
                                                                                   

consensus_14404#0      ATGTCTGTAGATCTGAAACGAGGAGAAACTCTGCCAATTCATATAAATATGTCATTTCCC 420
consensus_14404#1      ------------------------------------------------------------
                                                                                   

consensus_14404#0      TCTCTACCATGTGAAGTCTTGAGTGTGGATGCAATTGACATGTCTGGCAAGCATGAAGTG 480
consensus_14404#1      ------------------------------------------------------------
                                                                                   

consensus_14404#0      GACTTGCATACAAATATTTGGAAGCTTCGCTTGGATAAGTATGGCCATATCATTGGTACG 540
consensus_14404#1      ------------------------------------------------------------
                                                                                   

consensus_14404#0      GAGTATTTAAATGATCTAGTTGAGAAGGAGCATGGGACTCACAATCATGATCATGACCAT 600
consensus_14404#1      ------------------------------------------------------------
                                                                                   

consensus_14404#0      GAGCATGAAGATGAACAAAAGAAGCAAGAGCACACCTTTAATGAAGATGCAGAAAAAATG 660
consensus_14404#1      ------------------------------------------------------------
                                                                                   

consensus_14404#0      GTTAAGAGTGTGAAACAAGCAATGGAAAATGGTGAAGGGTGCCGAGTTTATGGTGTTCTA 720
consensus_14404#1      ------------------------------------------------------------
                                                                                   

consensus_14404#0      GATGTGCAGAGGGTTGCTGGTAACTTCCATATCTCGGTTCATGGTTTGAACATTTTTGTT 780
consensus_14404#1      ------------------------------------------------------------
                                                                                   

consensus_14404#0      GCTGAGAAGATTTTTGATGGGTCAAGCCATGTGAACGTCAGTCATATCATCCATGATCTA 840
consensus_14404#1      ------------------------------------------------------------
                                                                                   

consensus_14404#0      TCCTTTGGTCCAAAATATCCTGGAATTCATAATCCACTGGATGAGACTACAAGGATACTC 900
consensus_14404#1      ------------------------------------------------------------
                                                                                   

consensus_14404#0      CATGATACAAGTGGGACCTTCAAATACTATATCAAGATTGTTCCAACCGAGTACAGATAC 960
consensus_14404#1      ------------------------------------------------------------
                                                                                   

consensus_14404#0      CTCTCAAAGCAGGTGTTGCCAACAAATCAGTTTTCTGTCACCGAGTATTT-TGTTCCTAA 1019
consensus_14404#1      --------------------ACCAAACCAGTTT-CTGTCACCGAGTATTTGTGTTCCTAA 39
                                           * **** ****** **************** *********

consensus_14404#0      ACGCGCTACTGATAGGTCCGCGTGGCCAGCTGTGTACTTCTTGTATGATCTCTCACCAAT 1079
consensus_14404#1      -CGCGCTACTGATAG-TCCGCGTG-CCACCTGTGTACTTCTGGTATGATCTCTCACCAAT 96
                        ************** ******** *** ************ ******************

consensus_14404#0      TACAGTCACAATCAAAGAAGAAAGAAGGAACTTCCTGCATTTCCTCACCCGAC-TATGTG 1138
consensus_14404#1      TACAGTCACA--TCAAGAAGAAAGAAGGAACTTCC-GCATTTCCTCACCCGACCTATGTC 153
                       **********    ********************* ***************** ***** 

consensus_14404#0      C--AGTTCTTGGCGGTACCTTTGCAATGACAGGAATGCTTGACCGATGGATGTACCGGCT 1196
consensus_14404#1      CCAAGTTCTTGCCGGTACCTTTCCAATGACAGGAATGCTTGACCGATGGATGTACCGGCT 213
                       *  ******** ********** *************************************

consensus_14404#0      TATTGAGTCTGTCACAAAATCAAAGACCAGAAGCGTACTACGGTAATTGCGCATCACATG 1256
consensus_14404#1      TATTGAGTCTGTCACAAA-TCAAAGACCAGAAGCGTACTC-------------------- 252
                       ****************** ********************                     

consensus_14404#0      ATAAGTGGAGGCAAACTGTGACAACCCTGTGTGTTGTCACTGGTCATACAAATCAGTCAG 1316
consensus_14404#1      ------------------------------------------------------------
                                                                                   

consensus_14404#0      AGCATATCGTCTCAGATACGGTCAACCCCAGTGGGTTTTCATGTTTTGATATGCTCTATG 1376
consensus_14404#1      ------------------------------------------------------------
                                                                                   

consensus_14404#0      GCTCGATTGCTTAAAATACTTATGTTGTTAGCTTTGTCATTAATCACTCATGTTAGACTG 1436
consensus_14404#1      ------------------------------------------------------------
                                                                                   

consensus_14404#0      GCACGGACTCATAACAGTTTTGTAATCAATGATTCCCACAAATCGGAGGTGCCAACGTCG 1496
consensus_14404#1      ------------------------------------------------------------
                                                                                   

consensus_14404#0      TGTGATCATGGAGAAACAAATCCCAGTATAGCCTGATAATTCCAAAAAAGCAGGAAAAAA 1556
consensus_14404#1      ------------------------------------------------------------
                                                                                   

consensus_14404#0      ATCAACATATAAAACTTTGATACTCTTGCATCAAAAAAAAAAA 1599
consensus_14404#1      -------------------------------------------
                                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)