These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14405#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1604 fasta sequence [TTTCCCATTTCGCTCACCTGTTCCCCTCCTCCGCCCTCTCCCCAACTCGCCATTTTCCCCG-TCTTCCACAGTGACAACCACCACCCCACGCTTTCCCCTTCCTCCTCGCGATCCAGCAGCGGGAGAGATGGATCGGCCGCCGCCGGATCAGCAGCGGCAGAAGCAGGCGCCGCTCTTCTCGCCGTACCAGATGCCCCGCTTCCGCCTCAACCACCGGGTGGTGCTGGCGCCGATGACGCGGTGCAGGGCGATCGGCGGGGTGCCCGGCCCGGCGCTGGCGGAGTACTACGCGCAGCGGACCACCCAGGGTGGCCTGCTCATCTCCGAGGGCACCGTCGTCTCGCCCGCTGGCCCGGGGTTTCCTCATGTCCCTGGGATATACAATCAAGAGCAGACTGATGCATGGAAGAAGGTGGTGGATGCTGTTCATGCCAAGGGAGGCATCTTTTTCTGCCAGTTATGGCATGTAGGCAGAGCTTCTCACCAAGTATACCAGCCAAACGGTGCTGCACCAATATCCTCAACTGATAAGCCAATATCAGCAAGATGGAGAATACTGATGCCTGATGGCTCCTATGGCAAGTATCCTAAACCTAGGCGCCTGGCAGCATCGGAAATACCTGAAATTGTCGAACAATATCGTCAAGCCGCCATTAATGCCATTGAAGCAGGTTTTGATGGCATTGAGATCCATGGTGCTCATGGCTATATCATTGATCAATTCCTAAAGGATGGAATCAATGACCGCACTGACGAGTATGGTGGCTCACTTTCCAACCGCTGCCGGTTCCTACTTGA-GGTAACTAGGGCTGTGGTTTCTGCCATTGGAGCAGACCGAGTCGCGGTGAGGATATCACCAGCCATTGATCACCTTGACGCCTATGATTCAGACCCCATTAAGCTCGGCATGGCCGTTGTTGAGCGGCTGAATGCTCTCCAGCAGCAGTCA-GGGCGGCTCGCCTACCTCCACGTCACGCAGCCACGGTACACCGCCTACGGGCAGACCGAGTCTGGGCAGCATGGCAGTGCCGAGGAGGAGAGCCGCCTGATGCGCACCCTCCGGGGCACGTACCAGGGCACATTCATGTGCAGTGGCGGCTACACGCGGGAGCTTGG-GTTGGAAGCAGTGGAGAGCGGCGATGCC-GACCTGGTGTCGTACGGGCGGCTCTTCATATCAA-ACCC-GGACCTGGTCG-AGCGGTTCAGGCTGAACGCCGGGCTG-AACAAGTACGTGCGTAAGACA-TTCTACACGCCCGATCCTGTCGTGGGTTACACGGACTATCCGTTCCTCGGACAGCCTAAGTCGCGGATGTAAATGTACTGCGGGATAAGT-AAA-TCA-AGGATACGATTGTGTATTGTAAGGAAAATAAAGGGCA-ACGGTGAGGTGATTTAGCTTATTT-TTGGGACCTAATTTG-ACGGTAATTTATTC-TTTCACC-AAAT-CTGATATGAT-CCATT-GCT-GATTCAGTAGCTACTCTAGCCTATGTAAA-CCTTGGGTCATCAGCACAGATTGTATCTATATGTGTATTGCATAATGTTTCATATCAGTTGTCTAGCAGATTTATGCATCGTA-CCAGTTAGTAACTGTTATTTTGATGGGAAAAAAAAAA] [+] EMBL AK071203 [TTTCCCATTTCGCTCACCTGTTCCCCTCCTCCGCCCTCTCCCCAACTCGCCATTTTCCCCG TCTTCCACAGTGACAACCACCACCCCACGCTTTCCCCTTCCTCCTCGCGATCCAGCAGCGGGAGAGATGGATCGGCCGCCGCCGGATCAGCAGCGGCAGAAGCAGGCGCCGCTCTTCTCGCCGTACCAGATGCCCCGCTTCCGCCTCAACCACCGGGTGGTGCTGGCGCCGATGACGCGGTGCAGGGCGATCGGCGGGGTGCCCGGCCCGGCGCTGGCGGAGTACTACGCGCAGCGGACCACCCAGGGTGGCCTGCTCATCTCCGAGGGCACCGTCGTCTCGCCCGCTGGCCCGGGGTTTCCTCATGTCCCTGGGATATACAATCAAGAGCAGACTGATGCATGGAAGAAGGTGGTGGATGCTGTTCATGCCAAGGGAGGCATCTTTTTCTGCCAGTTATGGCATGTAGGCAGAGCTTCTCACCAAGTATACCAGCCAAACGGTGCTGCACCAATATCCTCAACTGATAAGCCAATATCAGCAAGATGGAGAATACTGATGCCTGATGGCTCCTATGGCAAGTATCCTAAACCTAGGCGCCTGGCAGCATCGGAAATACCTGAAATTGTCGAACAATATCGTCAAGCCGCCATTAATGCCATTGAAGCAGGTTTTGATGGCATTGAGATCCATGGTGCTCATGGCTATATCATTGATCAATTCCTAAAGGATGGAATCAATGACCGCACTGACGAGTATGGTGGCTCACTTTCCAACCGCTGCCGGTTCCTACTTGA GGTAACTAGGGCTGTGGTTTCTGCCATTGGAGCAGACCGAGTCGCGGTGAGGATATCACCAGCCATTGATCACCTTGACGCCTATGATTCAGACCCCATTAAGCTCGGCATGGCCGTTGTTGAGCGGCTGAATGCTCTCCAGCAGCAGTCA GGGCGGCTCGCCTACCTCCACGTCACGCAGCCACGGTACACCGCCTACGGGCAGACCGAGTCTGGGCAGCATGGCAGTGCCGAGGAGGAGAGCCGCCTGATGCGCACCCTCCGGGGCACGTACCAGGGCACATTCATGTGCAGTGGCGGCTACACGCGGGAGCTTGG GTTGGAAGCAGTGGAGAGCGGCGATGCC GACCTGGTGTCGTACGGGCGGCTCTTCATATCAA ACCC GGACCTGGTCG AGCGGTTCAGGCTGAACGCCGGGCTG AACAAGTACGTGCGTAAGACA TTCTACACGCCCGATCCTGTCGTGGGTTACACGGACTATCCGTTCCTCGGACAGCCTAAGTCGCGGATGTAAATGTACTGCGGGATAAGT AAA TCA AGGATACGATTGTGTATTGTAAGGAAAATAAAGGGCA ACGGTGAGGTGATTTAGCTTATTT TTGGGACCTAATTTG ACGGTAATTTATTC TTTCACC AAAT CTGATATGAT CCATT GCT GATTCAGTAGCTACTCTAGCCTATGTAAA CCTTGGGTCATCAGCACAGATTGTATCTATATGTGTATTGCATAATGTTTCATATCA ] [+] EMBL OSS10929A [TTNCCCATTTCGCTCACCTGTTCCCCTCCTCCGCCCTCTCCCCAACTCGCCATTTTCCCCG TCTTCCACAGTGACAACCACCACCCCACGCTTTCCCCTTCCTCCTCGCGATCCAGCAGCGGGAGAGATGGATCGGCCGCCGNCGGATCAGCAGCGGCAGAAGCAGGCGNCGCTCTTCTCGNCGTACCAGATGNCCCGCTTCCGCCTCAACCACCGGGTGGTGCTGGCGACGATGACGCGGTGCAGGGCGATCGnc ] [+] EMBL AK104843 [ ACCTGTTCCCCTCCTCCGCCCTCTCCCCAACTCGCCATTTTCCCCG TCTTCCACAGTGACAACCACCACCCCACGCTTTCCCCTTCCTCCTCGCGATCCAGCAGCGGGAGAGATGGATCGGCCGCCGCCGGATCAGCAGCGGCAGAAGCAGGCGCCGCTCTTCTCGCCGTACCAGATGCCCCGCTTCCGCCTCAACCACCGGGTGGTGCTGGCGCCGATGACGCGGTGCAGGGCGATCGGCGGGGTGCCCGGCCCGGCGCTGGCGGAGTACTACGCGCAGCGGACCACCCAGGGTGGCCTGCTCATCTCCGAGGGCACCGTCGTCTCGCCCGCTGGCCCGGGGTTTCCTCATGTCCCTGGGATATACAATCAAGAGCAGACTGATGCATGGAAGAAGGTGGTGGATGCTGTTCATGCCAAGGGAGGCATCTTTTTCTGCCAGTTATGGCATGTAGGCAGAGCTTCTCACCAAGTATACCAGCCAAACGGTGCTGCACCAATATCCTCAACTGATAAGCCAATATCAGCAAGATGGAGAATACTGATGCCTGATGGCTCCTATGGCAAGTATCCTAAACCTAGGCGCCTGGCAGCATCGGAAATACCTGAAATTGTCGAACAATATCGTCAAGCCGCCATTAATGCCATTGAAGCAGGCTTTGATGGCATTGAGATCCATGGTGCTCATGGCTATATCATTGATCAATTCCTAAAGGATGGAATCAATGACCGCACTGACGAGTATGGTGGCTCACTTTCCAACCGCTGCCGGTTCCTACTTGA GGTAACTAGGGCTGTGGTTTCTGCCATTGGAGCAGACCGAGTCGCGGTGAGGATATCACCAGCCATTGATCACCTTGACGCCTATGATTCAGACCCCATTAAGCTCGGCATGGCCGTTGTTGAGCGGCTGAATGCTCTCCAGCAGCAGTCA GGGCGGCTCGCCTACCTCCACGTCACGCAGCCACGGTACACCGCCTACGGGCAGACCGAGTCTGGGCAGCATGGCAGTGCCGAGGAGGAGAGCCGCCTGATGCGCACCCTCCGGGGCACGTACCAGGGCACATTCATGTGCAGTGGCGGCTACACGCGGGAGCTTGG GTTGGAAGCAGTGGAGAGCGGCGATGCC GACCTGGTGTCGTACGGGCGGCTCTTCATATCAA ACCC GGACCTGGTCG AGCGGTTCAGGCTGAACGCCGGGCTG AACAAGTACGTGCGTAAGACA TTCTACACGCCCGATCCTGTCGTGGGTTACACGGACTATCCGTTCCTCGGACAGCCTAAGTCGCGGATGTAAATGTACTGCGGGATAAGT AAA TCA AGGATACGATTGTGTATTGTAAGGAAAATAAAGGGCA ACGGTGAGGTGATTTAGCTTATTT TTGGGACCTAATTTG ACGGTAATTTATTC TTTCACC AAAT CTGATATGAT CCATT GCT GATTCAGTAGCTACTCTAGCCTATGTAAA CCTTGGGTCATCAGCACAGATTGTATCTATATGTGTATTGCAT ] [+] EMBL CB669879 [ TCCTCCCTTCACTCCCCAACTCGCCATTTTCCCCGATATTCCACAGTGACAACCACCACCCCACGCTTTCCCCTTCCTCCTCGCGATCCAGCAGCGGGAGAGATGGATCGGCCGCCGCCGGATCAGCAGCGGCAGAAGCAGGCGCCGCTCTTCTCGCCGTACCAGATGCCCCGCTTCCGCCTCAACCACCGGGTGGTGCTGGCGCCGATGACGCGGTGCAGGGCGATCGGCGGGGTGCCCGGCCCGGCGCTGGCGGAGTACTACGCGCAGCGGACCACCCAGGGTGGCCTGCTCATCTCCGAGGGCACCGTCGTCTCGCCCGCTGGCCCGGGGTTTCCTCATGTCCCTGGGATATACAATCAAGAGCAGACTGATGCATGGAAGAAGGTGGTGGATGCTGTTCATGCCAAGGGAGGCATCTTTTTCTGCCAGTTATGGCATGTAGGCAGAGCTTCTCACCAAGTATACCAGCCAAACGGTGCTGCACCAATATCCTCAACTGATAAGCCAATATCAGCAAGATGGAGAATACTGATGCCTGATGGCTCCTATGGCAAGTATCCTAAACCTAGGCGCCTGGCAGCATCGGAAATACCTGAAATTGTCGAACAATATCGTCAAGCCGCCATTAATGCCATTGAAGCAGGTTTTGATGGCATTGAGATCCATGGTGCTCATGGCTATATCATTGATCAATTCCTAAAGGATGGAATCAATGACCGCACTGACGAGTATGGTGGCTCACTTTCCAA CGCTGCCGGTTCCTACTTGA GGTAACTAGGGCTGTGGTTTCTGCCATTGGAG ] [+] EMBL CB641417 [ CGCGATCCAGCAGCGGGAGAGATGGATCGGCCGCCGCCGGATCAGCAGCGGCAGAAGCAGGCGCCGCTCTTCTCGCCGTACCAGATGCCCCGCTTCCGCCTCAACCACCGGGTGGTGCTGGCGCCGATGACGCGGTGCAGGGCGATCGGCGGGGTGCCCGGCCCGGCGCTGGCGGAGTACTACGCGCAGCGGACCACCCAGGGTGGCCTGCTCATCTCCGAGGGCACCGTCGTCTCGCCCGCTGGCCCGGGGTTTCCTCATGTCCCTGGGATATACAATCAAGAGCAGACTGATGCATGGAAGAAGGTGGTGGATGCTGTTCATGCCAAGGGAGGCATCTTTTTCTGCCAGTTATGGCATGTAGGCAGAGCTTCTCACCAAGTATACCAGCCAAACGGTGCTGCACCAATATCCTCAACTGATAAGCCAATATCAGCAAGATGGAGAATACTGATGCCTGATGGCTCCTATGGCAAGTATCCTAAACCTAGGCGCCTGGCAGCATCGGAAATACCTGAAATTGTCGAACAATATCGTCAAGCCGCCATTAATGCCATTGAAGCAGGTTTTGATGGCATTGAGATCCATGGTGCTCATGGCTATATCATTGATCAATTCCTAAAGGATGGAATCAATGACCGCACTGACGAGTATGGTGGCTCACTTTCCAACCGCTGCCGGTTCCTACTTGA GGTAACTAGGGCTGTGGTTTCTGCCATTGGAGCAGACCGAGTCGCGGTGAGGATATCACCAGCCATTGATCACCTTGACGCCTATGATTCAGACCCCATTAAGCTCGGCATGGCCGTTGTTGAGCGGCTGAATGCTCTCCAGCAGCAGTCA GGGCGGCTCGCCTACCTCCACGT ] [+] EMBL CB651181 [ CGGATCAGCAGCGGCAGAAGCAGGCGCCGCTCTTCTCGCCGTACCAGATGCCCCGCTTCCGCCTCAACCACCGGGTGGTGCTGGCGCCGATGACGCGGTGCAGGGCGATCGGCGGGGTGCCCGGCCCGGCGCTGGCGGAGTACTACGCGCAGCGGACCACCCAGGGTGGCCTGCTCATCTCCGAGGGCACCGTCGTCTCGCCCGCTGGCCCGGGGTTTCCTCATGTCCCTGGGATATACAATCAAGAGCAGACTGATGCATGGAAGAAGGTGGTGGATGCTGTTCATGCCAAGGGAGGCATCTTTTTCTGCCAGTTATGGCATGTAGGCAGAGCTTCTCACCAAGTATACCAGCCAAACGGTGCTGCACCAATATCCTCAACTGATAAGCCAATATCAGCAAGATGGAGAATACTGATGCCTGATGGCTCCTATGGCAAGTATCCTAAACCTAGGCGCCTGGCAGCATCGGAAATACCTGAAATTGTCGAACAATATCGTCAAGCCGCCATTAATGCCATTGAAGCAGGTTTTGATGGCATTGAGATCCATGGTGCTCATGGCTATATCATTGATCAATTCCTAAAGGATGGAATCAATGACCGCACTGACGAGTATGGTGGCTCACTTTCCAACCGCTGCCGGTTCCTACTTGA GGTAACTAGGGCTGTGGTTTCTGCCATTGGAGCAGACCGAGTCGCGGTGAGGATATCACCAGCCATTGATCACCTTGACGCCTATGATTCAGACCCCATTAAGCTCGGCATGGCCGTTGTTGAGCGGCTGAATGCTCTCCAGCAGCAGTCA GGGCGGCTCGCCTACCTCCAC ] [+] EMBL CF322757 [ TCTCACCAAGTATACCAGCCAAACGGTGCTGCACCAATATCCTCAACTGATAAGCCAATATCAGCAAGATGGAGAATACTGATGCCTGATGGCTCCTATGGCAAGTATCCTAAACCTAGGCGCCTGGCAGCATCGGAAATACCTGAAATTGTCGAACAATATCGTCAAGCCGCCATTAATGCCATTGAAGCAGGTTTTGATGGCATTGAGATCCATGGTGCTCATGGCTATATCATTGATCAATTCCTAAAGGATGGAATCAATGACCGCACTGACGAGTATGGTGGCTCACTTTCCAACCGCTGCCGGTTCCTACTTGAGGGTAACTAGGGCTGTGGTTTCTGCCATTGGAGCAGACCGAGTCGCGGTGAGGATATCACCAGCCATTGATCACCTTGACGCCTATGATTCAGACCCCATTAAGCTCGGCATGGCCGTTGTTGAGCGGCTGAATGCTCTCC GCAGCAGTCAGGGGCGGCTCGCCTACCTCCACGTCACGCAGCC ] [-] EMBL CB651182 [ CAGACCGAGTCGCGGTGAGGATATCACCAGCCATTGATCACCTTGACGCCTATGATTCAGACCCCATTAAGCTCGGCATGGCCGTTGTTGAGCGGCTGAATGCTCTCCAGCAGCAGTCA GGGCGGCTCGCCTACCTCCACGTCACGCAGCCACGGTACACCGCCTACGGGCAGACCGAGTCTGGGCAGCATGGCAGTGCCGAGGAGGAGAGCCGCCTGATGCGCACCCTCCGGGGCACGTACCAGGGCACATTCATGTGCAGTGGCGGCTACACGCGGGAGCTTGG GTTGGAAGCAGTGGAGAGCGGCGATGCC GACCTGGTGTCGTACGGGCGGCTCTTCATATCAA ACCC GGACCTGGTCG AGCGGTTCAGGCTGAACGCCGGGCTG AACAAGTACGTGCGTAAGACA TTCTACACGCCCGATCCTGTCGTGGGTTACACGGACTATCCGTTCCTCGGACAGCCTAAGTCGCGGATGTAAATGTACTGCGGGATAAGT AAA TCA AGGATACGATTGTGTATTGTAAGGAAAATAAAGGGCA ACGGTGAGGTGATTTAGCTTATTT TTGGGACCTAATTTG ACGGTAATTTATTC TTTCACC AAAT CTGATATGAT CCATT GCT GATTCAGTAGCTACTCTAGCCTATGTAAA CCTTGGGTCATCAGCACAGATTGTATCTATATGTGTATTGCATAATGTTTCATATCAGTTGTCTAGCAGATTTATGCATCGTA CCAGTTAGTAACTGTTATTTTGATGGGAAAAgt ] [-] EMBL CB669878 [ CAGACCGAGTCGCGGTGAGGATATCACCAGCCATTGATCACCTTGACGCCTATGATTCAGACCCCATTAAGCTCGGCATGGCCGTTGTTGAGCGGCTGAATGCTCTCCAGCAGCAGTCA GGGCGGCTCGCCTACCTCCACGTCACGCAGCCACGGTACACCGCCTACGGGCAGACCGAGTCTGGGCAGCATGGCAGTGCCGAGGAGGAGAGCCGCCTGATGCGCACCCTCCGGGGCACGTACCAGGGCACATTCATGTGCAGTGGCGGCTACACGCGGGAGCTTGG GTTGGAAGCAGTGGAGAGCGGCGATGCC GACCTGGTGTCGTACGGGCGGCTCTTCATATCAA ACCC GGACCTGGTCG AGCGGTTCAGGCTGAACGCCGGGCTG AACAAGTACGTGCGTAAGACA TTCTACACGCCCGATCCTGTCGTGGGTTACACGGACTATCCGTTCCTCGGACAGCCTAAGTCGCGGATGTAAATGTACTGCGGGATAAGT AAA TCA AGGATACGATTGTGTATTGTAAGGAAAATAAAGGGCA ACGGTGAGGTGATTTAGCTTATTT TTGGGACCTAATTTG ACGGTAATTTATTC TTTCACC AAAT CTGATATGAT CCATT GCT GATTCAGTAGCTACTCTAGCCTATGTAAA CCTTGGGTCATCAGCACAGATTGTATCTATATGTGTATTGCATAATGTTTCATATCAGTTGTGTAGCAGATTTATGCATCGTA CCAGTTAGTAACT ] [+] EMBL BI807868 [ CTACACGCGGGAGCTTGGCGTTGGAACCCGTGGAGA CGGCGATGCC GACCTGGTGTCGTACGGGCGGCTCTTCATATCCA ACCC GGACCTGGTCG AGCGGTTCAGGCTGAACGCCGGGCTG AACAAGTACGTGCGCAAGACACTTCTACACGCCCGATCCTGTCGTGGGTTACACGGACTATCCGTTCCTCGGACCGCCTAAGTCGCGGATGTAAATGTACTGCGGGATAAGT AAA TCACAGGATACGATTGTGTATTGTAAGGAAAATAAAGGGCACACGGTGAGGTGATTTAGCTTATTTCTTGGGACCTAATTTGCACGGTAATTTATTC TTTCACC CAAT CTGATATGAT CCCTT GCT GATTCCGTAGCTACTCTAGCCTATGTAAA CCTTGGGTCATCAGCCCAGATTGTATCTATATGTGTATTGCATAATGTTTCATATCAGTTGTCTAGCAGATTTATGCATCGTACCCAGTTAGTAACTGTTATTTTGATGGGAAAAAAAAAA] [+] EMBL BM420981 [ GGCGATGCCNGACCTGGTGTCGTACGGGCGGCTCTTCATATCAA ACCC GGACCT GTCG A CGGTTCAGGCTGAACGCCGGGCTG AACAAGTACGTGCGCAAGACA TTCTACACGCCCGATCCTGTCGTGGGTTACACGGACTATCCGTTCCTCGGACAGCCTAAGTCGCGGATGTAAATGTACTGCGGGATAAGT AAA TCA AGGATACGATTGTGTATTGTAAGGAAAATAAAGGGCA ACGGTGAGGTGATTTAGCTTATTT TTGGGACCTAA TTG ACGGTAATTTATTCNNTTCACC AAAT CTGATATGAT CCATT GCT GATTCAGTAGCTACTCTAGCCTATGTAAACCCTTGGGTCATCAGCACAGATTGTATCTATATGTGTATTGCATAATGTTTCATATCAGTTGTCTAGCAGATTTATGCATCGTA CCAGTTAGTAACTGTTATTTTGATGGGAAAA ] [+] EMBL BQ908147 [ GTGTCGTACGGGCGGCTCTTCATATCAATACCCTGGACCTGGTCGTACCGGTTCAGGCTGAACGCCGGGCTGTAACAAGTACGTGCGCAAGACA TTCTACACGCCCGATCCTGTCGT GGTTACACGGACTATCCGTTCCTCGGACAGCCTAAGTCGCGGATGTAAATGTACTGCGGGATAAGTGAAAGTCA AGGATACGATTGTGTATTGTAAGGAAAATAAAGGGCA ACGGTGAGGTGATTTAGCTTATTT TTGGGACCTAATTTG ACGGTAATTTATTC TTTCACCAAAATGCTGATATGATGCCATTGGCTGGATTCAGTAGCTACTCTAGCCTATGTAAA CCTTGGGTCATCAGCACAGATTGTATCTATATGTGTATTGCATAATGTTTCATATCAGTTGTCTAGCAGATTTATGCATCGTA CCAGTTAGTAACTGTTATTTTGATGGGAAAAAAA ] [+] EMBL AU065853 [ TGCGTAAGACA TTCTACACGCCCGATCCTGTCGTGGGTTACACGGACTATCCGTTCCTCGGACAGCCTAAGTNGCGGATGTAAATGTACTGCGGGATAAGT AAA TCA AGGATACGATTGTGTATTGTAAGGAAAATAAAGGGCA ACGGTGAGGTGATTTAGCTTATTT TTGGGACCTAATTTG ACGGTAATTTATTC TTTCACC AAAT CTGATATGAT CCATT GCT GATTCAGTAGCTACTCTAGCCTATGTAAA CCTTGGGTCATCAGCACAGATTGTATCTATATGTGTATTGCATAATGTTTCATATCAGTTGTCTAGCAGATTTATGCATCGTAaaaaa ] [+] EMBL CF931996 [ tcacTTTG ACGGTAATTTATTC TTTCACC AAAT CTGATATGAT CCATT GCT GATTCAGTAGCTACTCTAGCCTATGTAAA CCTTGGGTCATCAGCACAGATTGTATCTATATGTGTATTGCATAATGTTTCATATCAaaaaaa ] consensusID : consensus_14405#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 651 fasta sequence [TCGGCATGGCCGTTGTTGAGCGGCTGAATGCTCTCCAGCAGCAGTCAGGGCGGCTCGCATACCTCCACGTCACGCAGCCACGGTACACCGCCTACGGGCAGACCGAGTCTGGGCAGCATGGCAGTGCCGAGGAGGAGAGCCGCCTGATGCGCACCCTCCGGGGCACGTACCAGGGCACATTCATGTGCAGTGGCGGCTACACGCGGGAGCTTGGGTTGGAAGCAGTGGAGAGCGGCGATGCCGACCTGGTGTCGTACGGGCGGCTCTTCATATCAAACCCGGACCTGGTCGAGCGGTTCAGGCTGAACCCCGGGTTGAACAAGTACGTGCGTAAGACATTTTACACGCCCGATCCTGTGGTGGGTTACACGGACTATCCGTTCCTCGGACAGCCTAAGTCGCGGATGTAAATGTACTGCGGGATAAGTAAATCAAGGATACGATTGTGTATTGTAAGGAAAATAAAGGGCAACGGTGAGGTGATTTAGCTTATTTTTGGGCCCTAATTTGACGGTAATTTATTCTTTCCCCAAATCTGATATGATCCATTGCTGATTCAGTAGCTACTCTAGCCTATGTAACCCTTGGGTCATCAGCACAGATTGTATAGATATGTGTATTGCATAATGTTTCATAAAAAAAAAAAAAAGG] [-] EMBL CB641418 [TCGGCATGGCCGTTGTTGAGCGGCTGAATGCTCTCCAGCAGCAGTCAGGGCGGCTCGCATACCTCCACGTCACGCAGCCACGGTACACCGCCTACGGGCAGACCGAGTCTGGGCAGCATGGCAGTGCCGAGGAGGAGAGCCGCCTGATGCGCACCCTCCGGGGCACGTACCAGGGCACATTCATGTGCAGTGGCGGCTACACGCGGGAGCTTGGGTTGGAAGCAGTGGAGAGCGGCGATGCCGACCTGGTGTCGTACGGGCGGCTCTTCATATCAAACCCGGACCTGGTCGAGCGGTTCAGGCTGAACCCCGGGTTGAACAAGTACGTGCGTAAGACATTTTACACGCCCGATCCTGTGGTGGGTTACACGGACTATCCGTTCCTCGGACAGCCTAAGTCGCGGATGTAAATGTACTGCGGGATAAGTAAATCAAGGATACGATTGTGTATTGTAAGGAAAATAAAGGGCAACGGTGAGGTGATTTAGCTTATTTTTGGGCCCTAATTTGACGGTAATTTATTCTTTCCCCAAATCTGATATGATCCATTGCTGATTCAGTAGCTACTCTAGCCTATGTAACCCTTGGGTCATCAGCACAGATTGTATAGATATGTGTATTGCATAATGTTTCATAAAAAAAAAAAAAAGG] consensusID : consensus_14405#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 504 fasta sequence [GATTCGGCCGAGCTCGTGCCGAATTCGGCACGAGCCCCAACTCGCCATTTTCCCCGTCTTCCACAGTGACAACCACCACCCCAGGCTTTCCCCTTCCTCCTCGCGATCCAACAACGGGAGANATNGATCGGCCGCCNCCGGATCNNCANCGGCAGAAGCAGGCGCCGCTCTTCTCGCCGTACCAGATGCCCCGCTTCCGCCTCAACCACCGGGTGGTGCTGGCGCCGATGACCGGTGCAAGGCGATCGGNGGGGTGCCCGGCCCGGCGCTGGCGGAATNCTACGCTCANCGGACACCCAGGGTGGCCTGCTCTTCTCCNAAGGCACCGTCNTCTCNCCCGCTGGCCCGGGGTTTCCTCATGTCCCTGGGATATACNATCCANANCAGACTGATGCTGGAAAAAAGTGGTGGATGCTGTTCATGCCAAGGGAGGCATCTTTTTCTGCCANTTNTGGCATGTNGGCAGAACTTCTCNCCAANTNTNCCANCCNAACGGTGNTGNNC] [+] EMBL BE228984 [GATTCGGCCGAGCTCGTGCCGAATTCGGCACGAGCCCCAACTCGCCATTTTCCCCGTCTTCCACAGTGACAACCACCACCCCAGGCTTTCCCCTTCCTCCTCGCGATCCAACAACGGGAGANATNGATCGGCCGCCNCCGGATCNNCANCGGCAGAAGCAGGCGCCGCTCTTCTCGCCGTACCAGATGCCCCGCTTCCGCCTCAACCACCGGGTGGTGCTGGCGCCGATGACCGGTGCAAGGCGATCGGNGGGGTGCCCGGCCCGGCGCTGGCGGAATNCTACGCTCANCGGACACCCAGGGTGGCCTGCTCTTCTCCNAAGGCACCGTCNTCTCNCCCGCTGGCCCGGGGTTTCCTCATGTCCCTGGGATATACNATCCANANCAGACTGATGCTGGAAAAAAGTGGTGGATGCTGTTCATGCCAAGGGAGGCATCTTTTTCTGCCANTTNTGGCATGTNGGCAGAACTTCTCNCCAANTNTNCCANCCNAACGGTGNTGNNC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14405#0 TTTCCCATTTCGCTCACCTGTTCCCCTCCTCCGCCCTCTCCCCAACTCGCCATTTTCCCC 60 consensus_14405#1 ------------------------------------------------------------ consensus_14405#2 ------------------------------------------------------------ consensus_14405#0 GTCTTCCACAGTGACAACCACCACCCCACGCTTTCCCCTTCCTCCTCGCGATCCAGCAGC 120 consensus_14405#1 ------------------------------------------------------------ consensus_14405#2 ------------------------------------------------------------ consensus_14405#0 GGGAGAGATGGATCGGCCGCCGCCGGATCAGCAGCGGCAGAAGCAGGCGCCGCTCTTCTC 180 consensus_14405#1 ------------------------------------------------------------ consensus_14405#2 ------------------------------------------------------------ consensus_14405#0 GCCGTACCAGATGCCCCGCTTCCGCCTCAACCACCGGGTGGTGCTGGCGCCGATGACGCG 240 consensus_14405#1 ------------------------------------------------------------ consensus_14405#2 ------------------------------------------------------------ consensus_14405#0 GTGCAGGGCGATCGGCGGGGTGCCCGGCCCGGCGCTGGCGGAGTACTACGCGCAGCGGAC 300 consensus_14405#1 ------------------------------------------------------------ consensus_14405#2 ------------------------------------------------------------ consensus_14405#0 CACCCAGGGTGGCCTGCTCATCTCCGAGGGCACCGTCGTCTCGCCCGCTGGCCCGGGGTT 360 consensus_14405#1 ------------------------------------------------------------ consensus_14405#2 ------------------------------------------------------------ consensus_14405#0 TCCTCATGTCCCTGGGATATACAATCAAGAGCAGACTGATGCATGGAAGAAGGTGGTGGA 420 consensus_14405#1 ------------------------------------------------------------ consensus_14405#2 ------------------------------------------------------------ consensus_14405#0 TGCTGTTCATGCCAAGGGAGGCATCTTTTTCTGCCAGTTATGGCATGTAGGCAGAGCTTC 480 consensus_14405#1 ------------------------------------------------------------ consensus_14405#2 ------------------------------------------------------------ consensus_14405#0 TCACCAAGTATACCAGCCAAACGGTGCTGCACCAATATCCTCAACTGATAAGCCAATATC 540 consensus_14405#1 ------------------------------------------------------------ consensus_14405#2 ------------------------------------------------------------ consensus_14405#0 AGCAAGATGGAGAATACTGATGCCTGATGGCTCCTATGGCAAGTATCCTAAACCTAGGCG 600 consensus_14405#1 ------------------------------------------------------------ consensus_14405#2 ------------------------------------------------------------ consensus_14405#0 CCTGGCAGCATCGGAAATACCTGAAATTGTCGAACAATATCGTCAAGCCGCCATTAATGC 660 consensus_14405#1 ------------------------------------------------------------ consensus_14405#2 ------------------------------------------------------------ consensus_14405#0 CATTGAAGCAGGTTTTGATGGCATTGAGATCCATGGTGCTCATGGCTATATCATTGATCA 720 consensus_14405#1 ------------------------------------------------------------ consensus_14405#2 ------------------------------------------------------------ consensus_14405#0 ATTCCTAAAGGATGGAATCAATGACCGCACTGACGAGTATGGTGGCTCACTTTCCAACCG 780 consensus_14405#1 ------------------------------------------------------------ consensus_14405#2 ------------------------------------------------------------ consensus_14405#0 CTGCCGGTTCCTACTTGAGGTAACTAGGGCTGTGGTTTCTGCCATTGGAGCAGACCGAGT 840 consensus_14405#1 ------------------------------------------------------------ consensus_14405#2 ------------------------------------------------------------ consensus_14405#0 CGCGGTGAGGATATCACCAGCCATTGATCACCTTGACGCCTATGATTCAGACCCCATTAA 900 consensus_14405#1 ------------------------------------------------------------ consensus_14405#2 ------------------------------------------------------------ consensus_14405#0 GCTCGGCATGGCCGTTGTTGAGCGGCTGAATGCTCTCCAGCAGCAGTCAGGGCGGCTCGC 960 consensus_14405#1 --TCGGCATGGCCGTTGTTGAGCGGCTGAATGCTCTCCAGCAGCAGTCAGGGCGGCTCGC 58 consensus_14405#2 ----GATTCGGCCGAGCTCGTGC---CGAAT-----TCGGCACGAGCCC---CAACTCGC 45 * ***** * * ** **** * *** ** * * ***** consensus_14405#0 CTACCTCCACGTCA--CGCAGCCACGGTACACCGCCTACGGGCAGACCGAGTCTGGGCAG 1018 consensus_14405#1 ATACCTCCACGTCA--CGCAGCCACGGTACACCGCCTACGGGCAGACCGAGTCTGGGCAG 116 consensus_14405#2 CATTTTCCCCGTCTTCCACAGTGACAAC-CACCACCC-CAGGCTTTCCCCTTCCTCCTCG 103 *** **** * *** ** **** ** * *** ** ** * consensus_14405#0 CATGGCAGTGCCGAGGAGGAGAG--CCGCCTGATGCGCACCCTCCGGGGCACGTACCAGG 1076 consensus_14405#1 CATGGCAGTGCCGAGGAGGAGAG--CCGCCTGATGCGCACCCTCCGGGGCACGTACCAGG 174 consensus_14405#2 CGATCCAACAACGGGAGANATNGATCGGCCGCCNCCGGATCNNCANCGGCAGAAGCAGGC 163 * ** ** * * * * *** ** * * * **** * * consensus_14405#0 GCACATTCATGTGCAGTGGCGGCTACACGCGGGAGCTTGGGTTGGAAGCAGTGGAGAGCG 1136 consensus_14405#1 GCACATTCATGTGCAGTGGCGGCTACACGCGGGAGCTTGGGTTGGAAGCAGTGGAGAGCG 234 consensus_14405#2 GCCGCTCTTCTCGCCGTACCAGATGCCCC-----GCTTCCGCCTCAACCACCGGGTGGTG 218 ** * ** ** * * * * * **** * ** ** ** * * consensus_14405#0 GCGATGCCGAC--CTGGTGTCGTACGGGCGGCTCTTCATATCAAACCCGGACCTGGTCGA 1194 consensus_14405#1 GCGATGCCGAC--CTGGTGTCGTACGGGCGGCTCTTCATATCAAACCCGGACCTGGTCGA 292 consensus_14405#2 CTGGCGCCGATGACCGGTGCAAGGCGATCGGNGG--GGTGCCCGGCCCGGCGCTGGCGGA 276 * ***** * **** ** *** * * ***** **** ** consensus_14405#0 GCGGTTCA---GGCTGAACGCCGGGCTGAACAAGTACGTGCGTAAGACATTCTACACGCC 1251 consensus_14405#1 GCGGTTCA---GGCTGAACCCCGGGTTGAACAAGTACGTGCGTAAGACATTTTACACGCC 349 consensus_14405#2 ATNCTACGCTCANCGGACACCCAGGGTGGCCTGCTCTTCTCCNAAGGCACCGTCNTCTCN 336 * * * ** ** ** ** * * * *** ** * * * consensus_14405#0 CGATCCTGTCGTGGGTTACACGGACTATCCGTTCCTCGGACAGCCTAAGTCG--CGGATG 1309 consensus_14405#1 CGATCCTGTGGTGGGTTACACGGACTATCCGTTCCTCGGACAGCCTAAGTCG--CGGATG 407 consensus_14405#2 CCCGCTGGCCCGGGGTTTCCTCA--TGTCCCTGGGATATACNATCCANANCAGACTGATG 394 * * * ***** * * *** * ** * * * * **** consensus_14405#0 TAAATGTACTGCGGGATAAGTAAATCAAGGATACGATTGTGTATTGTAAGGAAAATAAAG 1369 consensus_14405#1 TAAATGTACTGCGGGATAAGTAAATCAAGGATACGATTGTGTATTGTAAGGAAAATAAAG 467 consensus_14405#2 CTGGAAAAAAGTGGTGGATGCTGTTCATGCCAAGGGAGGCATCTTTTTCTGCCANTTNTG 454 * * ** * * *** * * * * * ** * * * * * consensus_14405#0 GGCAACGGTGAGGTGATTTAGCTTATTTTTGGGACCTAATTTGACGGTAATTTATTCTTT 1429 consensus_14405#1 GGCAACGGTGAGGTGATTTAGCTTATTTTTGGGCCCTAATTTGACGGTAATTTATTCTTT 527 consensus_14405#2 GCATGTNGGCAGAACTTCTCNCCAANTNTNCCANCCNAAC--GGTGNTGNNC-------- 504 * * ** * * * * * * ** ** * * * consensus_14405#0 CACCAAATCTGATATGATCCATTGCTGATTCAGTAGCTACTCTAGCCTATGTAAACCTTG 1489 consensus_14405#1 CCCCAAATCTGATATGATCCATTGCTGATTCAGTAGCTACTCTAGCCTATGTAACCCTTG 587 consensus_14405#2 ------------------------------------------------------------ consensus_14405#0 GGTCATCAGCACAGATTGTATCTATATGTGTATTGCATAATGTTTCATATCAGTTGTCTA 1549 consensus_14405#1 GGTCATCAGCACAGATTGTATAGATATGTGTATTGCATAATGTTTCATAAAAAAAAAAAA 647 consensus_14405#2 ------------------------------------------------------------ consensus_14405#0 GCAGATTTATGCATCGTACCAGTTAGTAACTGTTATTTTGATGGGAAAAAAAAAA 1604 consensus_14405#1 AAGG--------------------------------------------------- 651 consensus_14405#2 ------------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||