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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14467#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 2644 fasta sequence
[TCTCCTCTCTTCCTCTTCCCCCAATCTCCGACAGTTGCCAAATTTCCCTTCCCACCCCCAAACCCAAACCCCAGCGACGACGGCGACGACGCGCAGCAGACGAAAGCGAGCGAGAGGCGAGAGAAATCCCATCGTTTCCCAAACCCTAACCCCCTCCTCCTCCTCCTCCAGATCTCGGCGGCCGCGCGGCTGATGCGAGGTGAGCCCCGTCCGCCCTAGGGTTTGCGGCGGGGTGCGTGGTGGTGGTGGTTGGGCCGGGGGGGACGGGGCCCTCCTGCTCGCGGGGGTGGGGGTTGGGTGGGGATGGCGGCGGCGCGCGCGCACGTGAAGGACCCGGCGCACCGGACCAAGGTGGTGCTCCGGAGGCTGCCGCCGGCGATCGCGCAGCAGGCCGTCGTGGAACAGGTCGACGCGCGCTTCGGCGGCCGGTACGACTGGTCGTGCTTCCGCCCCGGCAATGCCAGCCAAAAGAATCACAGATATTCTCGACTCTACCTTAACTTCAAGGGCCCAGAAGATGTCGTTGAATTTGCTGAGGTCTTCAATGGTCATGTGTTTGTGAATGAAAAGGGTGCTCAATTTAAAGCTCTTGTGGAATATGCACCATCGCAACAGGTCCCCAAGTCAAACACGAAGAAAGATGCTCGTCAAGGAACTATAATGAAAGATCCGGAATACTTGGAGTTTCTTGAATCGATTTCAAAGCCTGCTGAGCATCTGCCAAGTGCTGAAATTCAGCTCGAAAGGAAAGAAGCTGAAAGGGCAGCTGCTGGAAAGGAACCACCTGTTGTGACGCCTCTTATGGTCTATGTTCGCCAGCAAAGGGCAGCTAAGAGTATGGCTCAGAGATCTGGAAGTAGTAGACTCAGTAGAAAAGTTGCGGGTGTTGTTACTAGCAGTCCTAGTCCTTCTAAAAGGGGTTCTGAGAAGCGCAGGACCTCTGCTTCGACGCAATATGTTCTACGAGAGAATGCTAAGGAGAAGCCAACTTATATCTTAGTGCCAAAGAGAGACGAGCATGCGCAGAGGGAAAAAGATGCTACAAGTGGCGGGATTTCTGGTTCTGCTCATGTCGCGGAAAACAAAAAAGAGAAAATTGTGCTTTTGAAAGGAAGAGCAAGGGTCGATTCTAATACATCTGATGTCACATCTCAGCAGCAGTCAGGGACCCCTATGAAAAATGCTGCACAATCTAGTTCTAGGCAAGATCCGCGGCTTGAGGGCAGTGGCAGAATTATTAAGACTATACTTTCAAACAAGGAAGGACGGCATGTGGTTACGTCTCAACATGATCAGGAAGGTCACATAATTACAGCTGAGAAGCGCCCACCACGGATTCCAAACCCACGTTCCGTTGTTAAAGATCAGGTAGTTGAAAATGCTGAGAAAAACCATTTGGATGACAAACATAGTCATCTCCATGGTTCTGGGCTCATCAGTGAAAAGACTGAAAGACATGCTAGAAATAGAGATAGGCCTGATCGTGGTGTATGGGCCCCTCGTCGCTATGACAAATCTGCATCAGGTGGGACGCATTCCTCGTCATCTGAGTTCTCACCAATGCAGCAACATTCTGGTGAAAATTTCTGTCAGCAAGCAGATGGCCATGGAGAGAGAAAAATAGACCCAAGGGGTCATGGTGGTATTCGCGGAGGCCCTGTGGAAAATGGACATAGACATGCTAACCGCCGTGGTCCTCCACGTGGTCTGAAGGAGATGGAAATTTCTGCAAGCACATCTGATGGAAAGCCTTCAAAGAGAGCCTCTGCCAACTATGGTGCTCATGAGAG-GCAAGTGTGGGTTCAAAAATCAAGCTCGGCGACG-TGATCTT-GTCCAATGATGATACTCATCAAAACAAATATTGCAAGTTGTGGAGTTCTGGATTTTGCAGCTTGATCCTGTGAAGTACTGTTAACAAAATGCCCCCGATCATATGCTTCCATGAAGTGCAATCTCAGATTTGTCAATCGAAATCTCAGCTTTAGCTGAAAAGGGAGCTTATATGATTTGATTCACAGCAATAGTGAATTAACATAACCCACTTTAGGTAGCTCTTGATTGCTTTGGGTGAGACTTGATTTGGGCCCAAGGTTGCTATTCTGGAGCAATGGAAGGATTTAGGTTGGCATCATTACCCTCGTGACAGTGGTCACATATTTCTGAGACCCCTGGAGAATATACACGACCTCAACTAATCAGAGATGGGTGTACATATCTCTAGAGAAAGAAGAGGTCTGGTTCTGACTTCTGTTCGCAGGTTAGCGGTGCCATGTATCTACAAAAGAGATAAAAAAAAGTTATCAGACTGCCTGGTTTGC-TAAAT-AAAAGTGAATTAG-TTGATAGA-TTATGA-GAATCCACTGTTTAGGCGGCTGCGACCGTGGTCACCAACAGAAGTTACCCTAGAGTGCAAAGTGGCATCTCATTTTGGTTTTGTGCCCCTGCCCCCCCTGAGTAACGGGATGTGGTATTGTTTTGACATGTGGATGTTGATGGTGTGCGTCTTCCTGTTAATGTTTCACCAGATAATTATGGGGGTATTGTTAAGAATGATGATATGATGTACAGCATCAAAGGTGCTTGCTGTTTTAATCTTGAGCAAGTTGTCGTGCTTCTATGAAATGTGA-----AACAAAAAAAAAAAAAAAAA]
[+] EMBL AK105415 [TCTCCTCTCTTCCTCTTCCCCCAATCTCCGACAGTTGCCAAATTTCCCTTCCCACCCCCAAACCCAAACCCCAGCGACGACGGCGACGACGCGCAGCAGACGAAAGCGAGCGAGAGGCGAGAGAAATCCCATCGTTTCCCAAACCCTAACCCCCTCCTCCTCCTCCTCCAGATCTCGGCGGCCGCGCGGCTGATGCGAGGTGAGCCCCGTCCGCCCTAGGGTTTGCGGCGGGGTGCGTGGTGGTGGTGGTTGGGCCGGGGGGGACGGGGCCCTCCTGCTCGCGGGGGTGGGGGTTGGGTGGGGATGGCGGCGGCGCGCGCGCACGTGAAGGACCCGGCGCACCGGACCAAGGTGGTGCTCCGGAGGCTGCCGCCGGCGATCGCGCAGCAGGCCGTCGTGGAACAGGTCGACGCGCGCTTCGGCGGCCGGTACGACTGGTCGTGCTTCCGCCCCGGCAATGCCAGCCAAAAGAATCACAGATATTCTCGACTCTACCTTAACTTCAAGGGCCCAGAAGATGTCGTTGAATTTGCTGAGGTCTTCAATGGTCATGTGTTTGTGAATGAAAAGGGTGCTCAATTTAAAGCTCTTGTGGAATATGCACCATCGCAACAGGTCCCCAAGTCAAACACGAAGAAAGATGCTCGTCAAGGAACTATAATGAAAGATCCGGAATACTTGGAGTTTCTTGAATCGATTTCAAAGCCTGCTGAGCATCTGCCAAGTGCTGAAATTCAGCTCGAAAGGAAAGAAGCTGAAAGGGCAGCTGCTGGAAAGGAACCACCTGTTGTGACGCCTCTTATGGTCTATGTTCGCCAGCAAAGGGCAGCTAAGAGTATGGCTCAGAGATCTGGAAGTAGTAGACTCAGTAGAAAAGTTGCGGGTGTTGTTACTAGCAGTCCTAGTCCTTCTAAAAGGGGTTCTGAGAAGCGCAGGACCTCTGCTTCGACGCAATATGTTCTACGAGAGAATGCTAAGGAGAAGCCAACTTATATCTTAGTGCCAAAGAGAGACGAGCATGCGCAGAGGGAAAAAGATGCTACAAGTGGCGGGATTTCTGGTTCTGCTCATGTCGCGGAAAACAAAAAAGAGAAAATTGTGCTTTTGAAAGGAAGAGCAAGGGTCGATTCTAATACATCTGATGTCACATCTCAGCAGCAGTCAGGGACCCCTATGAAAAATGCTGCACAATCTAGTTCTAGGCAAGATCCGCGGCTTGAGGGCAGTGGCAGAATTATTAAGACTATACTTTCAAACAAGGAAGGACGGCATGTGGTTACGTCTCAACATGATCAGGAAGGTCACATAATTACAGCTGAGAAGCGCCCACCACGGATTCCAAACCCACGTTCCGTTGTTAAAGATCAGGTAGTTGAAAATGCTGAGAAAAACCATTTGGATGACAAACATAGTCATCTCCATGGTTCTGGGCTCATCAGTGAAAAGACTGAAAGACATGCTAGAAATAGAGATAGGCCTGATCGTGGTGTATGGGCCCCTCGTCGCTATGACAAATCTGCATCAGGTGGGACGCATTCCTCGTCATCTGAGTTCTCACCAATGCAGCAACATTCTGGTGAAAATTTCTGTCAGCAAGCAGATGGCCATGGAGAGAGAAAAATAGACCCAAGGGGTCATGGTGGTATTCGCGGAGGCCCTGTGGAAAATGGACATAGACATGCTAACCGCCGTGGTCCTCCACGTGGTCTGAAGGAGATGGAAATTTCTGCAAGCACATCTGATGGAAAGCCTTCAAAGAGAGCCTCTGCCAACTATGGTGCTCATGAGAG GCAAGTGTGGGTTCAAAAATCAAGCTCGGCGACG TGATCTT GTCCAATGATGATACTCATCAAAACAAATATTGCAAGTTGTGGAGTTCTGGATTTTGCAGCTTGATCCTGTGAAGTACTGTTAACAAAATGCCCCCGATCATATGCTTCCATGAAGTGCAATCTCAGATTTGTCAATCGAAATCTCAGCTTTAGCTGAAAAGGGAGCTTATATGATTTGATTCACAGCAATAGTGAATTAACATAACCCACTTTAGGTAGCTCTTGATTGCTTTGGGTGAGACTTGATTTGGGCCCAAGGTTGCTATTCTGGAGCAATGGAAGGATTTAGGTTGGCATCATTACCCTCGTGACAGTGGTCACATATTTCTGAGACCCCTGGAGAATATACACGACCTCAACTAATCAGAGATGGGTGTACATATCTCTAGAGAAAGAAGAGGTCTGGTTCTGACTTCTGTTCGCAGGTTAGCGGTGCCATGTATCTACAAAAGAGATAAAAAAAAGTTATCAGACTGCCTGGTTTGC TAAAT AAAAGTGAATTAG TTGATAGA TTATGA GAATCCACTGTTTAGGCGGCTGCGACCGTGGTCACCAACAGAAGTTACCCTAGAGTGCAAAGTGGCATCTCATTTTGGTTTTGTGCCCCTGCCCCCCCTGAGTAACGGGATGTGGTATTGTTTTGACATGTGGATGTTGATGGTGTGCGTCTTCCTGTTAATGTTTCACCAGATAATTATGGGGGTATTGTTAAGAATGATGATATGATGTACAGCATCAAAGGTGCTTGCTGTTTTAATCTTGAGCAAGTTGTCGTGCTTCTATGAAATGT ]
[+] EMBL AK101324 [ CCAATCTCCGACAGTTGCCAAATTTCCCTTCCCACCCCCAAACCCAAACCCCAGCGACGACGGCGACGACGCGCAGCAGACGAAAGCGAGCGAGAGGCGAGAGAAATCCCATCGTTTCCCAAACCCTAACCCCCTCCTCCTCCTCCTCCAGATCTCGGCGGCCGCGCGGCTGATGCGAGGTGAGCCCCGTCCGCCCTAGGGTTTGCGGCGGGGTGCGTGGTGGTGGTGGTTGGGCCGGGGGGGACGGGGCCCTCCTGCTCGCGGGGGTGGGGGTTGGGTGGGGATGGCGGCGGCGCGCGCGCACGTGAAGGACCCGGCGCACCGGACCAAGGTGGTGCTCCGGAGGCTGCCGCCGGCGATCGCGCAGCAGGCCGTCGTGGAACAGGTCGACGCGCGCTTCGGCGGCCGGTACGACTGGTCGTGCTTCCGCCCCGGCAATGCCAGCCAAAAGAATCACAGATATTCTCGACTCTACCTTAACTTCAAGGGCCCAGAAGATGTCGTTGAATTTGCTGAGGTCTCCAATGGTCATGTGTTTGTGAATGAAAAGGGTGCTCAATTTAAAGCTCTTGTGGAATATGCACCATCGCAACAGGT CCCAAGTCAAACACGAAGAAAGATGCTCGTCAAGGAACTATAATGAAAGATCCGGAATACTTGGAGTTTCTTGAATCGATTTCAAAGCCTGCTGAGCATCTGCCAAGTGCTGAAATTCAGCTCGAAAGGAAAGAAGCTGAAAGGGCAGCTGCTGGAAAGGAACCACCTGTTGTGACGCCTCTTATGGTCTATGTTCGCCAGCAAAGGGCAGCTAAGAGTATGGCTCAGAGATCTGGAAGTAGTAGACTCAGTAGAAAAGTTGCGGGTGTTGTTACTAGCAGTCCTAGTCCTTCTAAAAGGGGTTCTGAGAAGCGCAGGACCTCTGCTTCGACGCAATATGTTCTACGAGAGAATGCTAAGGAGAAGCCAACTTATATCTTAGTGCCAAAGAGAGACGAGCATGCGCAGAGGGAAAAAGATGCTACAAGTGGCGGGATTTCTGGTTCTGCTCATGTCGCGGAAAACAAAAAAGAGAAAATTGTGCTTTTGAAAGGAAGAGCAAGGGTCGATTCTAATACATCTGATGTCACATCTCAGCAGCAGTCAGGGACCCCTATGAAAAATGCTGCACAATCTAGTTCTAGGCAAGATCCGCGGCTTGAGGGCAGTGGCAGAATTATTAAGACTATACTTTCAAACAAGGAAGGACGGCATGTGGTTACGTCTCAACATGATCAGGAAGGTCACATAATTACAGCTGAGAAGCGCCCACCACGGATTCCAAACCCACGTTCCGTTGTTAAAGATCAGGTAGTTGAAAATGCTGAGAAAAACCATTTGGATGACAAACATAGTCATCTCCATGGTTCTGGGCTCATCAGTGAAAAGACTGAAAGACATGCTAGAAATAGAGATAGGCCTGATCGTGGTGTATGGGCCCCTCGTCGCTATGACAAATCTGCATCAGGTGGGACGCATTCCTCGTCATCTGAGTTCTCACCAATGCAGCAACATTCTGGTGAAAATTTCTGTCAGCAAGCAGATGGCCATGGAGAGAGAAAAATAGACCCAAGGGGTCATGGTGGTATTCGCGGAGGCCCTGTGGAAAATGGACATAGACATGCTAACCGCCGTGGTCCTCCACGTGGTCTGAAGGAGATGGAAATTTCTGCAAGCACATCTGATGGAAAGCCTTCAAAGAGAGCCTCTGCCAACTATGGTGCTCATGAGAG GCAAGTGTGGGTTCAAAAATCAAGCTCGGCGACG TGATCTT GTCCAATGATGATACTCATCAAAACAAATATTGCAAGTTGTGGAGTTCTGGATTTTGCAGCTTGATCCTGTGAAGTACTGTTAACAAAATGCCCCCGATCATATGCTTCCATGAAGTGCAATCTCAGATTTGTCAATCGAAATCTCAGCTTTAGCTGAAAAGGGAGCTTATATGATTTGATTCACAGCAATAGTGAATTAACATAACCCACTTTAGGTAGCTCTTGATTGCTTTGGGTGAGACTTGATTTGGGCCCAAGGTTGCTATTCTGGAGCAATGGAAGGATTTAGGTTGGCATCATTACCCTCGTGACAGTGGTCACATATTTCTGAGACCCCTGGAGAATATACACGACCTCAACTAATCAGAGATGGGTGTACATATCTCTAGAGAAAGAAGAGGTCTGGTTCTGACTTCTGTTCGCAGGTTAGCGGTGCCATGTATCTACAAAAGAGATAAAAAAAAGTTATCAGACTGCCTGGTTTGC TAAAT AAAAGTGAATTAG TTGATAGA TTATGA GAATCCACTGTTTAGGCGGCTGCGACCGTGGTCACCAACAGAAGTTACCCTAGAGTGCAAAGTGGCATCTCATTTTGGTTTTGTGCCCCTGCCCCCCCTGAGTAACGGGATGTGGTATTGTTTTGACATGTGGATGTTGATGGTGTGCGTCTTCCTGTTAATGTTTCACCAGATAATTATGGGGGTATTGTTAAGAATGATGATATGATGTACAGCATCAAAGGTGCTTGCTGTTTTAATCTTGAGCAAGTTGTCG ]
[+] EMBL CB631490 [ GGCGGCGCGCGCGCACGTGAAGGACCCGGCGCACCGGACCAAGGTGGTGCTCCGGAGGCTGCCGCCGGCGATCGCGCAGCAGGCCGTCGTGGAACAGGTCGACGCGCGCTTCGGCGGCCGGTACGACTGGTCGTGCTTCCGCCCCGGCAATGCCAGCCAAAAGAATCACAGATATTCTCGACTCTACCTTAACTTCAAGGGCCCAGAAGATGTCGTTGAATTTGCTGAGGTCTTCAATGGTCATGTGTTTGTGAATGAAAAGGGTGCTCAATTTAAAGCTCTTGTGGAATATGCACCATCGCAACAGGTCCCCAAGTCAAACACGAAGAAAGATGCTCGTCAAGGAACTATAATGAAAGATCCGGAATACTTGGAGTTTCTTGAATCGATTTCAAAGCCTGCTGAGCATCTGCCAAGTGCTGAAATTCAGCTCGAAAGGAAAGAAGCTGAAAGGGCAGCTGCTGGAAAGGAACCACCTGTTGTGACGCCTCTTATGGTCTATGTTCGCCAGCAAAGGGCAGCTAAGAGTATGGCTCAGAGATCTGGAAGTAGTAGACTCAGTAGAAAAGTTGCGGGTGTTGTTACTAGCAGTCCTAGTCCTTCTAAAAGGGGTTCTGAGAAGCGCAGGACCTCTGCTTCGACGCAATATGTTCTACGAGAGAATGCTAAGGAGAAGCCAACTTATATCTTAGTGCCAAAGAGAGACGAGCATGCGCAGAGGGAAAAAGATGCTACAAGTGGCGGGATTTCTGGTTCTGCTCATGTCGCGGAAAACAAAAAAGAAGAAATTGTG ]
[+] EMBL CF324284 [ GCACGTGAAGGACCCGGCGCACCGGACCAAGGTGGTGCTCCGGAGGCTGCCGCCGGCGATCGCGCAGCAGGCCGTCGTGGAACAGGTCGACGCGCGCTTCGGCGGCCGGTACGACTGGTCGTGCTTCCGCCCCGGCAATGCCAGCCAAAAGAATCACAGATATTCTCGACTCTACCTTAACTTCAAGGGCCCAGAAGATGTCGTTGAATTTGCTGAGGTCTTCAATGGTCATGTGTTTGTGAATGAAAAGGGTGCTCAATTTAAAGCTCTTGTGGAATATGCACCATCGCAACAGGTCCCCAAGTCAAACACGAAGAAAGATGCTCGTCAAGGAACTATAATGAAAGATCCGGAATACTTGGAGTTTCTTGAATCGATTTCAAAGCCTGCTGAGCATCTGCCAAGTGCTGAAATTCAGCTCGAAAGGAAAGAAGCTGAAAGGGCAGCTGCTGGAA ]
[+] EMBL CB677297 [ GAAGGACCCGGCGCACCGGACCAAGGTGGTGCTCCGGAGGCTGCCGCCGGCGATCGCGCAGCAGGCCGTCGTGGAACAGGTCGACGCGCGCTTCGGCGGCCGGTACGACTGGTCGTGCTTCCGCCCCGGCAATGCCAGCCAAAAGAATCACAGATATTCTCGACTCTACCTTAACTTCAAGGGCCCAGAAGATGTCGTTGAATTTGCTGAGGTCTTCAATGGTCATGTGTTTGTGAATGAAAAGGGTGCTCAATTTAAAGCTCTTGTGGAATATGCACCATCGCAACAGGTCCCCAAGTCAAACACGAAGAAAGATGCTCGTCAAGGAACTATAATGAAAGATCCGGAATACTTGGAGTTTCTTGAATCGATTTCAAAGCCTGCTGAGCATCTGCCAAGTGCTGAAATTCAGCTCGAAAGGAAAGAAGCTGAAAGGGCAGCTGCTGGAAAGGAACCACCTGTTGTGACGCCTCTTATGGTCTATGTTCGCCAGCAAAGGGCAGCTAAGAGTATGGCTCAGAGATCTGGAAGTAGTAGACTCAGTAGAAAAGTTGCGGGTGTTGTTACTAGCAGTCCTAGTCCTTCTAAAAGGGGTTCTGAGAAGCGCAGGACCTCTGCTTCGACGCAATATGTTCTACGAGAGAATGCTAAGGAGAAGCCAACTTATATCTTAGTGCCAAAGAGAGACGAGCATGCGCAGAGGGAAAAAGATGCTACAAGTGGCGGGATTTCTGGTTCTGCTCATGTCGCGGAAAACAAAAAAGAGAAAATTGTGCTTTTGAAAGGAAGAGCAAGGGTCGATTCTAATACATCTGA ]
[+] EMBL AU062730 [ AGCTCGAAAGGAAAGAAGCTGAAAGGGCAGCTGCTGGAAAGGAACCACCTGTTGTGACGCCTCTTATGGTCTATGTTCGCCAGCAAAGGGCAGCTAAGAGTATGGCTCAGAGATCTGGAAGTAGTAGACTCAGTAGAAAAGTTGCGGGTGTTGTTACTAGCAGTCCTAGTCCTTCTAAAAGGGGTTCTGAGAAGCGCAGGACCTCTGCTTCGACGCAATATGTTCTACGAGAGAATGCTAAGGAGAAGCCAACTTATATCTTAGTGCCAAAGAGAGACGAGCATNCGCAGAGGGAAAAAGATGCTACAAGTGGCGGGATTTCTNGTTCTGCTCATGTCGCGGAAAACAAAAAAGAGAAAATTGTGCTT ]
[+] EMBL AA749952 [ AATTGTGCTTTTGAAAGGAAGAGCAAGGGTCGATTCTAATACATCTGATGTCACATCTCAGCAGCAGTCAGGGACCCCTATGAAAAATGCTGCACAATCTAGTTCTAGGCAAGATCCGCGGCTTGAGGGCAGTGGCAGAATTATTAAGACTATACTTTCAAACAAGGAAGGACGGCATGTGGTTGGCTCTCAACATGATCAGGAAGGTCACATAATTACAGCTG ]
[+] EMBL CB668247 [ AAGGGTCGATTCTAATACATCTGATGTCACATCTCAGCAGCAGTCAGGGACCCCTATGAAAAATGCTGCACAATCTAGTTCTAGGCAAGATCCGCGGCTTGAGGGCAGTGGCAGAATTATTAAGACTATACTTTCAAACAAGGAAGGACGGCATGTGGTTACGTCTCAACATGATCAGGAAGGTCACATAATTACAGCTGAGAAGCGCCCACCACGGATTCCAAACCCACGTTCCGTTGTTAAAGATCAGGTAGTTGAAAATGCTGAGAAAAACCATTTGGATGACAAACATAGTCATCTCCATGGTTCTGGGCTCATCAGTGAAAAGACTGAAAGACATGCTAGAAATAGAGATAGGCCTGATCGTGGTGTATGGGCCCCTCGTCGCTATGACAAATCTGCATCAGGTGGGACGCATTCCTCGTCATCTGAGTTCTCACCAATGCAGCAACATTCTGGTGAAAATTTCTGTCAGCAAGCAGATGGCCATGGAGAGAGAAAAATAGACCCAAGGGGTCATGGTGGTATTCGCGGAGGCCCTGTGGAAAATGGACATAGACATGCTAACCGCCGTGGTCCTCCACGTGGTCTGAAGGAGATGGAAATTTCTGCAAGCACATCTGATGGAAAGCCTTCAAAGAGAGCCTCTGCCAACTATGGTGCTCATGAGAG GCAAGTGTGGGTTCAAAAATCAAGCTCGGCGACG TGATCTT GTCCCATGATGATACTCATCAAAACAAATATTGCAAGTTGTGGAGTTCTGGATTTTGCAGCTTGATCCTGTGAAGTACTGTTTACAAAATGCCCCCGAT ]
[+] EMBL CF313068 [ AGATCAGGTAGTTGAAAATGCTGAGAAAAACCATTTGGATGACAAACATAGTCATCTCCATGGTTCTGGGCTCATCAGTGAAAAGACTGAAAGACATGCTAGAAATAGAGATAGGCCTGATCGTGGTGTATGGGCCCCTCGTCGCTATGACAAATCTGCATCAGGTGGGACGCATTCCTCGTCATCTGAGTTCTCACCAATGCAGCAACATTCTGGTGAAAATTTCTGTCAGCAAGCAGATGGCCATGGAGAGAGAAAAATAGACCCAAGGGGTCATGGTGGTATTCGCGGAGGCCCTGTGGAAAATGGACATAGACATGCTAACCGCCGTGGTCCTCCACGTGGTCTGAAGGAGATGGAAATTTCTGCAAGCACATCTGATGGAAAGCCTTCAAAGAGAGCCTCTGCCAACTATGGTGCTCATGAGAG GCAAGTGTGGGTTCAAAAATCAAGCTCGGCGACG TGATCTT GTCCAATGATGATACTCATCAAAACAAATATTGCAAGTTGTGGAGTTCTGGATTTTGCAGCTTGATCCTGTGAAGTACTGTTAACAAAATGCCCCCGATCATATGCTTCCATGAA ]
[+] EMBL BI805745 [ TGGTCTGAAGGAGATGGAAATTTCT CAAGCACATCTGANGGAAACCCTTCAAAGAGAGCCTCTGCCAACTATGGTGCTCATGAGAGNCCAAGTGT GGTTCAAAAATCAAGCTCGGCGACGTTGATCTTGGTCC ATGATGATACTCATC AAAC AATATTGCAAGTTGTGGA TTCTGGATTTTGCAGCTTGATCCTGTGAAGTACTGTTAAC ANATGCCCCCGATCATATGCTTCCATGAAGTGCAATCTCAGANTTGTCAATCGAAATCTCAGCTTTAGCTGAAAAGGGAGCTTATATGATTTGATTCACAGCAATAGTGAATTAACATAACCCACTTTAGGTAGCTCTTGATTGCTTTGGGTGAGACTTGATTTGGGCCCAAGGTTGCTATTCTGGAGCAATGGAAGGATTTAGGTTGGCATCATTACCCTCGTGACAGTGGTCACATATTTCTGAGA CCCTGGAGAATATACACGACCTCCACTAATCAGAGATGGGTGTACATATCTCTAGAGAAAGAAGAGGTCTGGTTCTGACTTCTGTTC CAGGTTA CGGTCCCATGTATCTAC AAAGAGATAAAAAAAAGTTATCAGACTGCCTGGTTTGC TAAAT AAAAGTGAATTAG TTGATAaa aaa ]
[-] EMBL CB631491 [ GGGTTCAAAAATCAAGCTCGGCGACG TGATCTT GTCCAATGATGATACTCATCAAAACAAATATTGCAAGTTGTGGAGTTCTGGATTTTGCAGCTTGATCCTGTGAAGTACTGTTAACAAAATGCCCCCGATCATATGCTTCCATGAAGTGCAATCTCAGATTTGTCAATCGAAATCTCAGCTTTAGCTGAAAAGGGAGCTTATATGATTTGATTCACAGCAATAGTGAATTAACATAACCCACTTTAGGTAGCTCTTGATTGCTTTGGGTGAGACTTGATTTGGGCCCAAGGTTGCTATTCTGGAGCAATGGAAGGATTTAGGTTGGCATCATTACCCTCGTGACAGTGGTCACATATTTTTGAGACCCCTGGAGAATATACACGACCTCAACTAATCAGAGATGGGTGTACATATCTCTAGAGAAAGAAGAGGTCTGGTTCTGACTTCTGTTCGCAGGTTAGCGGTGCCATGTATCTACAAAAGAGATAAAAAAAAGTTATCAGACTGCCTGGTTTGC TAAAT AAAAGTGAATTAG TTGATAGA TTATGA GAATCCACTGTTTAGGCGGCTGCGACCGTGGTCACCAACAGAAGTTACCCTAGAGTGCAAAGTGGCATCTCATTTTGGTTTTGTGCCCCTGCCCCCCCTGAGTAACGGGATGTGGTATTGTTTTGACATGTGGATGTTGATGGTGTGCGTCTTCCTGTTAATGTTTCACCAGATAATTATGGGGGTATTGTTAAGAATGATGATATGATGTACAGCATCAAAGGTGCTTGCTGTTTTAATCTTGAGCAAGTTGTCGTGCTTCTAT ]
[-] EMBL CB668248 [ ATACTCATCAAAACAAATATTGCAAGTTGTGGAGTTCTGGATTTTGCAGCTTGATCCTGTGAAGTACTGTTAACAAAATGCCCCCGATCATATGCTTCCATGAAGTGCAATCTCAGATTTGTCAATCGAAATCTCAGCTTTAGCTGAAAAGGGAGCTTATATGATTTGATTCACAGCAATAGTGAATTAACATAACCCACTTTAGGTAGCTCTTGATTGCTTTGGGTGAGACTTGATTTGGGCCCAAGGTTGCTATTCTGGAGCAATGGAAGGATTTAGGTTGGCATCATTACCCTCGTGACAGTGGTCACATATTTCTGAGACCCCTGGAGAATATACACGACCTCAACTAATCAGAGATGGGTGTACATATCTCTAGAGAAAGAAGAGGTCTGGTTCTGACTTCTGTTCGCAGGTTAGCGGTGCCATGTATCTACAAAAGAGATAAAAAAAAGTTATCAGACTGCCTGGTTTGC TAAAT AAAAGTGAATTAG TTGATAGA TTATGA GAATCCACTGTTTAGGCGGCTGCGACCGTGGTCACCAACAGAAGTTACCCTAGAGTGCAAAGTGGCATCTCATTTTGGTTTTGTGCCCCTGCCCCCCCTGAGTAACGGGATGTGGTATTGTTTTGACATGTGGATGTTGATGGTGTGCGTCTTCCTGTTAGGGTTTCACCAGATAATTATGGGGGTATTGTTAAGAATGATGATATGATGTACAGCATCAAAGGTGCTTtaagg ]
[-] EMBL CB677298 [ TACTCATCAAAACAAATATTGCAAGTTGTGGAGTTCTGGATTTTGCAGCTTGATCCTGTGAAGTACTGTTAACAAAATGCCCCCGATCATATGCTTCCATGAAGTGCAATCTCAGATTTGTCAATCGAAATCTCAGCTTTAGCTGAAAAGGGAGCTTATATGATTTGATTCACAGCAATAGTGAATTAACATAACCCACTTTAGGTAGCTCTTGATTGCTTTGGGTGAGACTTGATTTGGGCCCAAGGTTGCTATTCTGGAGCAATGGAAGGATTTAGGTTGGCATCATTACCCTCGTGACAGTGGTCACATATTTTTGAGACCCCTGGAGAATATACACGACCTCAACTAATCAGAGATGGGTGTACATATCTTTAGAGAAAGAAGAGGTCTGGTTCTGACTTCTGTTCGCAGGTTAGCGGTGCCATGTATTTACAAAAGAGAT AAAAAAAGTTATCAGACTGCCTGGTTTGC TAAAT AAAAGTGAATTAG TTGATAGA TTATGA GAATCCACTGTTTAGGCGGCTGCGACCGTGGTCACCAACAGAAGTTACCCTAGAGTGCAAAGTGGCATCTCATTTTGGTTTTGTGCCCCTGCCCCCCCTGAGTAACGGGATGTGGTATTGTTTTGACATGTGGATGTTGATGGTGTGCGTCTTCCTGTTAATGTTTCACCAGATAATTATGGGGGTATTGTTAAGAATGATGATATGATGTACAGCATCAAAGGTGCTTGCTGTTTTAATCTTGAGCAAGTTGTCGT ]
[+] EMBL AU033163 [ GATAAAAAAAAGGTANCAAGCTTCCCGGGTTGCNTAAATAAAAAGTGAATTAGNTTGATAGATTTATGAGGAATCCACTGTTTAGNCGGCTGCGACCGTGGNCACCAACAGAAGTTACCCTAGAGTGCAAAGTGGCATCTCATTTTGGTTTTGTGCCCCTGCCCCCCCTGAGTAACGGGATGTGGTATTGTTTTGACATGTGGATGTTGATGGTGTGCGTCTTCCTGTTAATGTTTCACCAGATAATTATGGGGGTANTGTTAAGAATGATGATATGATGTACAGCATCAAAGGTGCTTGCTGTTTTAATCTTGAGCAAGTTGTCGTGCTTCTATGAAATGTGATTGTTAACAAAAAAAAAAAAAAAA ]
[-] EMBL CF313069 [ AAAAAAAGTTATCAGACTGCCTGGTTTGC TAAAT AAAAGTGAATTAG TTGATAGA TTATGA GAATCCACTGTTTAGGCGGCTGCGACCGTGGCCACCAACAGAAGTTACCCTAGAGTGCAAAGTGGCATTTCATTTTGGTTTTGTGCCCCTGCCCCCCCTGAGTAACGGGATGTGGTATTGTTTTGACATGTGGATGTTGATGGTGTGCGTCTTCCTGTTAATGTTTCACCAGATAATTATGGGGGTATTGTTAAGAATGATGATATGATGTACAGCATCAAAGGTGCTTGCTGTTTTAATTTTGAGCAAGTTGTCGTGCTTCAAAAAAA A AAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_14467#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 568 fasta sequence
[NGGATAANAACCATTGGTGTTTGATGTTGGGGAAATGATGGCCCAGGTGTATTTGGACAAGGAAGATTAGGTGGATCATACCTTGNGACAGTGTTAANTATTTTTGAGACCCTGGGGATAAACACGACTTCAATTATTCAGAGATGGGTGAAAATATTTTTAGAGAAAGAAGAGTTCTGGTTCTGANTTCTGTTCGCAGGTTAGCGGTGCCATGTATNTACAAAAGAGATAAAAAAAAGTTATCAGACTGCNTGGTTTGCTAAATAAAAGTGAATTAGTTGATAGATTATGAGAATCCACTGTTTAGGCGGCTGCGACCGTGGTCACCAACAGAAGTTACCCTAGAGTGCAAAGTGGCATCTCATTTTGGTTTTGTGCCCCTGCCCCCCCTGAGTAACGGGATGTGGTATTGTTTTGACATGTGGATGTTGATGGTGTGCGTCTTCCTGTTAATGTTTCACCAGATAATTATGGGGGTATTGTTAAGAATGATGATATGATGTACAGCATCAAAGGTGCTTGCTGTTTTAATCTTGAGCAAGTTGTCGTGCTTCTATGAAAAAAAAAA]
[-] EMBL AA752087 [NGGATAANAACCATTGGTGTTTGATGTTGGGGAAATGATGGCCCAGGTGTATTTGGACAAGGAAGATTAGGTGGATCATACCTTGNGACAGTGTTAANTATTTTTGAGACCCTGGGGATAAACACGACTTCAATTATTCAGAGATGGGTGAAAATATTTTTAGAGAAAGAAGAGTTCTGGTTCTGANTTCTGTTCGCAGGTTAGCGGTGCCATGTATNTACAAAAGAGATAAAAAAAAGTTATCAGACTGCNTGGTTTGCTAAATAAAAGTGAATTAGTTGATAGATTATGAGAATCCACTGTTTAGGCGGCTGCGACCGTGGTCACCAACAGAAGTTACCCTAGAGTGCAAAGTGGCATCTCATTTTGGTTTTGTGCCCCTGCCCCCCCTGAGTAACGGGATGTGGTATTGTTTTGACATGTGGATGTTGATGGTGTGCGTCTTCCTGTTAATGTTTCACCAGATAATTATGGGGGTATTGTTAAGAATGATGATATGATGTACAGCATCAAAGGTGCTTGCTGTTTTAATCTTGAGCAAGTTGTCGTGCTTCTATGAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14467#0 TCTCCTCTCTTCCTCTTCCCCCAATCTCCGACAGTTGCCAAATTTCCCTTCCCACCCCCA 60
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 AACCCAAACCCCAGCGACGACGGCGACGACGCGCAGCAGACGAAAGCGAGCGAGAGGCGA 120
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 GAGAAATCCCATCGTTTCCCAAACCCTAACCCCCTCCTCCTCCTCCTCCAGATCTCGGCG 180
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 GCCGCGCGGCTGATGCGAGGTGAGCCCCGTCCGCCCTAGGGTTTGCGGCGGGGTGCGTGG 240
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 TGGTGGTGGTTGGGCCGGGGGGGACGGGGCCCTCCTGCTCGCGGGGGTGGGGGTTGGGTG 300
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 GGGATGGCGGCGGCGCGCGCGCACGTGAAGGACCCGGCGCACCGGACCAAGGTGGTGCTC 360
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 CGGAGGCTGCCGCCGGCGATCGCGCAGCAGGCCGTCGTGGAACAGGTCGACGCGCGCTTC 420
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 GGCGGCCGGTACGACTGGTCGTGCTTCCGCCCCGGCAATGCCAGCCAAAAGAATCACAGA 480
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 TATTCTCGACTCTACCTTAACTTCAAGGGCCCAGAAGATGTCGTTGAATTTGCTGAGGTC 540
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 TTCAATGGTCATGTGTTTGTGAATGAAAAGGGTGCTCAATTTAAAGCTCTTGTGGAATAT 600
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 GCACCATCGCAACAGGTCCCCAAGTCAAACACGAAGAAAGATGCTCGTCAAGGAACTATA 660
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 ATGAAAGATCCGGAATACTTGGAGTTTCTTGAATCGATTTCAAAGCCTGCTGAGCATCTG 720
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 CCAAGTGCTGAAATTCAGCTCGAAAGGAAAGAAGCTGAAAGGGCAGCTGCTGGAAAGGAA 780
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 CCACCTGTTGTGACGCCTCTTATGGTCTATGTTCGCCAGCAAAGGGCAGCTAAGAGTATG 840
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 GCTCAGAGATCTGGAAGTAGTAGACTCAGTAGAAAAGTTGCGGGTGTTGTTACTAGCAGT 900
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 CCTAGTCCTTCTAAAAGGGGTTCTGAGAAGCGCAGGACCTCTGCTTCGACGCAATATGTT 960
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 CTACGAGAGAATGCTAAGGAGAAGCCAACTTATATCTTAGTGCCAAAGAGAGACGAGCAT 1020
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 GCGCAGAGGGAAAAAGATGCTACAAGTGGCGGGATTTCTGGTTCTGCTCATGTCGCGGAA 1080
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 AACAAAAAAGAGAAAATTGTGCTTTTGAAAGGAAGAGCAAGGGTCGATTCTAATACATCT 1140
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 GATGTCACATCTCAGCAGCAGTCAGGGACCCCTATGAAAAATGCTGCACAATCTAGTTCT 1200
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 AGGCAAGATCCGCGGCTTGAGGGCAGTGGCAGAATTATTAAGACTATACTTTCAAACAAG 1260
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 GAAGGACGGCATGTGGTTACGTCTCAACATGATCAGGAAGGTCACATAATTACAGCTGAG 1320
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 AAGCGCCCACCACGGATTCCAAACCCACGTTCCGTTGTTAAAGATCAGGTAGTTGAAAAT 1380
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 GCTGAGAAAAACCATTTGGATGACAAACATAGTCATCTCCATGGTTCTGGGCTCATCAGT 1440
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 GAAAAGACTGAAAGACATGCTAGAAATAGAGATAGGCCTGATCGTGGTGTATGGGCCCCT 1500
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 CGTCGCTATGACAAATCTGCATCAGGTGGGACGCATTCCTCGTCATCTGAGTTCTCACCA 1560
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 ATGCAGCAACATTCTGGTGAAAATTTCTGTCAGCAAGCAGATGGCCATGGAGAGAGAAAA 1620
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 ATAGACCCAAGGGGTCATGGTGGTATTCGCGGAGGCCCTGTGGAAAATGGACATAGACAT 1680
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 GCTAACCGCCGTGGTCCTCCACGTGGTCTGAAGGAGATGGAAATTTCTGCAAGCACATCT 1740
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 GATGGAAAGCCTTCAAAGAGAGCCTCTGCCAACTATGGTGCTCATGAGAGGCAAGTGTGG 1800
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 GTTCAAAAATCAAGCTCGGCGACGTGATCTTGTCCAATGATGATACTCATCAAAACAAAT 1860
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 ATTGCAAGTTGTGGAGTTCTGGATTTTGCAGCTTGATCCTGTGAAGTACTGTTAACAAAA 1920
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 TGCCCCCGATCATATGCTTCCATGAAGTGCAATCTCAGATTTGTCAATCGAAATCTCAGC 1980
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 TTTAGCTGAAAAGGGAGCTTATATGATTTGATTCACAGCAATAGTGAATTAACATAACCC 2040
consensus_14467#1 ------------------------------------------------------------
consensus_14467#0 ACTTTAGGTAGCTCTTGATTGCTTTGGGTGAGACTTGATTTGGGCCCAAGGTTGCTATTC 2100
consensus_14467#1 --------------NGGATAANAACCATTGGTGTTTGATGTTGGGGAAATGATG--GCCC 44
*** ** ***** * ** ** * ** *
consensus_14467#0 TGGAGCAATGGAAGGATTTAGGTTGGCATCATTAC-CCTCGTGACAGTGGTCACATATTT 2159
consensus_14467#1 AGGTGTATTTGGACAAGGAAGATTAGGTGGATCATACCTTGNGACAGTG-TTAANTATTT 103
** * * * * * * ** ** * ** * *** * ******* * * *****
consensus_14467#0 CTGAGACCCCTGGAGAATATACACGACCTCAACTAATCAGAGATGGGTGTACATATCTCT 2219
consensus_14467#1 TTGAGACCCT--GGGGATAAACACGACTTCAATTATTCAGAGATGGGTGAAAATATTTTT 161
******** * * *** ******* **** ** ************* * **** * *
consensus_14467#0 AGAGAAAGAAGAGGTCTGGTTCTGACTTCTGTTCGCAGGTTAGCGGTGCCATGTATCTAC 2279
consensus_14467#1 AGAGAAAGAAGAGTTCTGGTTCTGANTTCTGTTCGCAGGTTAGCGGTGCCATGTATNTAC 221
************* *********** ****************************** ***
consensus_14467#0 AAAAGAGATAAAAAAAAGTTATCAGACTGCCTGGTTTGCTAAATAAAAGTGAATTAGTTG 2339
consensus_14467#1 AAAAGAGATAAAAAAAAGTTATCAGACTGCNTGGTTTGCTAAATAAAAGTGAATTAGTTG 281
****************************** *****************************
consensus_14467#0 ATAGATTATGAGAATCCACTGTTTAGGCGGCTGCGACCGTGGTCACCAACAGAAGTTACC 2399
consensus_14467#1 ATAGATTATGAGAATCCACTGTTTAGGCGGCTGCGACCGTGGTCACCAACAGAAGTTACC 341
************************************************************
consensus_14467#0 CTAGAGTGCAAAGTGGCATCTCATTTTGGTTTTGTGCCCCTGCCCCCCCTGAGTAACGGG 2459
consensus_14467#1 CTAGAGTGCAAAGTGGCATCTCATTTTGGTTTTGTGCCCCTGCCCCCCCTGAGTAACGGG 401
************************************************************
consensus_14467#0 ATGTGGTATTGTTTTGACATGTGGATGTTGATGGTGTGCGTCTTCCTGTTAATGTTTCAC 2519
consensus_14467#1 ATGTGGTATTGTTTTGACATGTGGATGTTGATGGTGTGCGTCTTCCTGTTAATGTTTCAC 461
************************************************************
consensus_14467#0 CAGATAATTATGGGGGTATTGTTAAGAATGATGATATGATGTACAGCATCAAAGGTGCTT 2579
consensus_14467#1 CAGATAATTATGGGGGTATTGTTAAGAATGATGATATGATGTACAGCATCAAAGGTGCTT 521
************************************************************
consensus_14467#0 GCTGTTTTAATCTTGAGCAAGTTGTCGTGCTTCTATGAAATGTGAAACAAAAAAAAAAAA 2639
consensus_14467#1 GCTGTTTTAATCTTGAGCAAGTTGTCGTGCTTCTATGAAAAAAAAAA------------- 568
**************************************** ***
consensus_14467#0 AAAAA 2644
consensus_14467#1 -----
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||