These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14505#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 2283 fasta sequence [GACGACGGCGTGCGGGCCGTGCTCGCCGCCGGGGCCGTGGCCCACCTGACGCGGCTCCTCGCCCACCCCGACGAGAAGGTTGTTGATGCTAGTGCACGTGCTCTGAGAATGATTTATCAATCGAAACTAGCTCCAAAGTTTGATGTCAACAATAATGAGAAAAACATGGAATTTCTTCTTACCCTTTTGAACAGCGAGAATGAAAATGTCACAGAGCTTGCTGCCAATATTATATCTCACTCTTGTGATAGCACTACAGAACAATTAGCACTATGT-CTGCTGGAGTTCCGCAGAGACTTGTTAACCATTTTGGAGGCTCCATGAATCTACGGGATGCTTGCTTAGATTCTTTGACTGCAATCATAAGAAATAACTGGGAAGTTGCTTCAAGATTTGCACTGCTGGACCATGGAAAAGCTTTGCGCTCAATAGTTGCATTAATACATGATCGGAGCCCACGCACAAGACTACTTGCTTGTTTGTGCTTGATTGCGCTTAGCCATGCTTCTCCCTGTCACTNTCAAGACAGACAAATTAAAACCAAGTTGATCCTGGTCTTACTTGAGCTCATCGAGGAACCTGGTCATGTAGGAGATGATGCTCCATTGGCATTGACAACCTTGATCAAAGACAGTGTGGAACTGCAGAAGCAAGCACTCTCAACAAACGCAGTTCAGAAGTTAAGCAACCATCTTATAGCAAATTCGTTGGAGTCAAGGCGTGCAGTGACCATATTGCTTGCTTTAGCTGAACTTTGCTCAAAATTGGAAGAATCAAGATCTCAACTTATGTCAGTTCAGGCATCTACCTTAATCCTTGATGCACTGAAGCATGCTTCTGTTGATATCCGTGTTGCAGCATGTTCATGTCTTAAGAATATCTCTAGGTCATCCAAAGTACTTAGTGCTGGGAAATTATCCTGTGATACATTTATTGCCCCACTAGTCCAGCTTTTGTATGACTCGTCTATGTCAGTTCAGGTTGCTGCCCTTGGTGCTATTTGCAATATTGCTGTGAATTTAACACCCAGGAAATCGATTCTTCTTCAATCTGGGGCTGTCTCCCAGCTTGTTCATTTGTCCAAGTCTATGGATCCAACATTGAGATTAAAAGCTGTGTGGGCTCTTAGGAATATTATGTTCCTTTTGAATCCAAAGGATAAAGACTTTATTCTCAAGGAACTAACTTTATCTACTCTTTCAAGCCTCATATGTGATTCTGAACATTTTGTCCAGGAACAAACTTTGGCACTGGTGCACAATCTTGTTGATGGATATGTGAACTCTTTTAATTATGTCATTGGTGAAGATGGCATGATTTTAAATGCTATTTCAAGACAACTGAATAATGCACCTGCCCCAGGAGTATGCATACAGGG-TATGTTTGTGCTTGCAAATGTTGCAGCTGGGGGCGAATTAAACAAGGAGGCTGTGATGAATATTCTTGTACCTCGTCGAGCAGATCGTGTCAAACAATCTTTTATAGTTAACTTTCTGCTGAGCAAGGACAAACAATTGAGAGTTGCAACCTTGT-GGTGTGTTCTGAACTTGATTTATCCAAAATGTGAGG-CCTCTTCTGTTCGAGTTGTCAGA-CT-CCAAAATGCTGGGGTAATTTCACAAGTAAAAGGCATGATAAATGATCCCTGCTTGGATTGCAAGCTTAGAGTACGCATGGTGCTTGAACACTGCTTGGACAATGCCGACGATGGTTTCATGTGAGCAGCCGCCATTGCACCTCGGGCCATTGAAGCTTGCAGAATCAAACACTGCTTGAGCAAAGAGAAGATGGAAGATTGATCTCTTCGCATCAGCAATCCGCGCCATGAACTGTGAACAATGATCATCCAGTAAAAAAAAGCCTTCACCGACATCTTCTCGTCGCCTCCAAGCCTGTCA-TTGTAAATTTGGTGAA-CTCCATGAGGACCATGACTGGTTTCTCTTGCAGAAAC-AAG-CAAGAAACCTTGTTGTAACCATGCCACGTC-AGAAAACCTGAGCTGATTTCCTCCGAAACGGAAAAAGGTTTTAGGTGCTAGCTCTGGAGAAATTTCATTCCTTAGCATGACCAAAAACCTAGTGCTTGTGCTGTGACGATGAGTGGTGAGTGTATAATTGAGGGAGATATGCTACTGCTGCTGTAAATTGTACTACTCTCTTGGGCTATGTTTTTCACGTTCGGCCATGGGACGGTGCCCAGCAAGCAGTGTGTAATGGTTTTGCCGCTTGCTTTTGCTTCTCAATAAAGATACTACTCTTGACAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CF304461 [GACGACGGCGTGCGGGCCGTGCTCGCCGCCGGGGCCGTGGCCCACCTGACGCGGCTCCTCGCCCACCCCGACGAGAAGGTTGTTGATGCTAGTGCACGTGCTCTGAGAATGATTTATCAATCGAAACTAGCTCCAAAGTTTGATGTCAACAATAATGAGAAAAACATGGAATTTCTTCTTACCCTTTTGAACAGCGAGAATGAAAATGTCACAGAGCTTGCTGCCAATATTATATCTCACTCTTGTGATAGCACTACAGAACAATTAGCACTATGTGCTGCTGGAGTTCCGCAGAGACTTGTTAACCATTTTGGAGGCTCCATGAATCTACGGGATGCTTGCTTAGATTCTTTGACTGCAATCATAAGAAATAACTGGGAAGTTGCTTCAAGATTTGCACTGCTGGACCATGGAAAAGCTTTGCGCTCAATAGTTGCATTAATACATGATCGGAGCCCACGCACAAGACTACTTGCTTGTTTGTGCTTGATTGCGCTTAGCCATGCTTCTCCCTGTCACTNTCAAGACAGACAAATTAAAACCAAGTTGATCCTGGTCTTACTTGAGCTCATC ] [+] EMBL C72764 [ GGAATTTCTTCTTACCCTTTTGAACAGCGAGAATGAAAATGTCACAGAGCTTGCTGCCAATATTATATCTCACTCTTGTGATAGCACTACAGAACAATTAGCACTATGT NTGCTGGAGTTCCGCAGAGACTTGTTAACCATTTTGGAGGCTCCATGAATCTACGGGATGCTTGCTTAGATTCTTTGACTGCAATCATAAGAAATAACTGGGAAGTTGCTTCAAGATTTGCACTGCTGGACCATGGAAAAGCTTTGCGCTCAATAGTTGCATTAATACATGATCGGAGCCCACGCACAAG ] [+] EMBL CB628609 [ ATCTCACTCTTGTGATAGCACTACAGAACAATTAGCACTATGTGCTGCTGGAGTTCCGCAGAGACTTGTTAACCATTTTGGAGGCTCCATGAATCTACGGGATGCTTGCTTAGATTCTTTGACTGCAATCATAAGAAATAACTGGGAAGTTGCTTCAAGATTTGCACTGCTGGACCATGGAAAAGCTTTGCGCTCAATAGTTGCATTAATACATGATCGGAGCCCACGCACAAGACTACTTGCTTGTTTGTGCTTGATTGCGCTTAGCCATGCTTCTCCCTGTCACTTTCAAGACAGACAAATTAAAACCAAGTTGATCCTGGTCTTACTTGAGCTCATCGAGGAACCTGGTCATGTAGGAGATGATGCTCCATTGGCATTGACAACCTTGATCAAAGACAGTGTGGAACTGCAGAAGCAAGCACTCTCAACAAACGCAGTTCAGAAGTTAAGCAACCATCTTATAGCAAATTCGTTGGAGTCAAGGCGTGCAGTGACCATATTGCTTGCTTTAGCTGAACTTTGCTCAAAATTGGAAGAATCAAGATCTCAACTTATGTCAGTTCAGGCATCTACCTTAATCCTTGATGCACTGAAGCATGCTTCTGTTGATATCCGTGTTGCAGCATGTTCATGTCTTAAGAATATCTCTAGGTCATCCAAAGTACTTAGTGCTGGGAAATTATCCTGTGATACATTTATTGCCCCACTAGTCCAGCTTTTGTATGACTCGTCTATGTCAGTTCAGGTTGCTGCCCTTGGTGCTATTTG ] [+] EMBL CB633718 [ ACTTGCCCTCATCGAGGAACCTGGTCATGTAGGAGATGATGCTCCATTGGCATTGACAACCTTGATCAAAGACAGTGTGGAACTGCAGAAGCAAGCACTCTCAACAAACGCAGTTCAGAAGTTAAGCAACCATCTTATAGCAAATTCGTTGGAGTCAAGGCGTGCAGTGACCATATTGCTTGCTTTAGCTGAACTTTGCTCAAAATTGGAAGAATCAAGATCTCAACTTATGTCAGTTCAGGCATCTACCTTAATCCTTGATGCACTGAAGCATGCTTCTGTTGATATCCGTGTTGCAGCATGTTCATGTCTTAAGAATATCTCTAGGTCATCCAAAGTACTTAGTGCTGGGAAATTATCCTGTGATACATTTATTGCCCCACTAGTCCAGCTTTTGTATGACTCGTCTATGTCAGTTCAGGTTGCTGCCCTTGGTGCTATTTGCAATATTGCTGTGAATTTAACACCCAGGAAATCGATTCTTCTTCAATCTGGGGCTGTCTCCCAGCTTGTTCATTTGTCCAAGTCTATGGATCCAACATTGAGATTAAAAGCTGTGTGGGCTCTTAGGAATATTATGTTCCTTTTGAATCCAAAGGATAAAGACTTTATTCTCAAGGAACTAACTTTATCTACTCTTTCAAGCCTCATATGTGATTCTGAACATTTTGTCCAGGAACAAACTTTGGCACTGGTGCACAATCTTGTTGATGGATATGTGAACTCTTTTAATTATGTCATTGGTGAAGATGGCATGATTTTAAATGCTATTTCAAGACAACTGAATAATGCACCTGCCCCAGGAGTATGCATACAAGG TATGTTT ] [+] EMBL CF323409 [ TTCAATCTGGGGCTGTCTCCCAGCTTGTTCATTTGTCCAAGTCTATGGATCCAACATTGAGATTAAAAGCTGTGTGGGCTCTTAGGAATATTATGTTCCTTTTGAATCCAAAGGATAAAGACTTTATTCTCAAGGAACTAACTTTATCTACTCTTTCAAGCCTCATATGTGATTCTGAACATTTTGTCCAGGAACAAACTTTGGCACTGGTGCACAATCTTGTTGATGGATATGTGAACTCTTTTAATTATGTCATTGGTGAAGATGGCATGATTTTAAATGCTATTTCAAGACAACTGAATAATGCACCTGCCCCAGGAGTATGCATACAGGGNTATGTTTGTGCTTGCAAATGTTGCAGCTGGGGGCGAATTAAACAAGGAGGCTGTGATGAATATTCTTGTACCTCGTCGAGCAGATCGTGTCAAACAATCTTTTATAGTTAACTTTCTGCTGAGCAAGGACAAACAATTGAGAGTTGCAACCTTGTGGGTGTGTTCTGAACTTGATTTATCCAAAATGTGAGG CCTCTTCTGTTCGAGTTGTCAGACCT CCAAAATGCTGGGGTAATTTCACAAGTAAAAGGCATGA ] [+] EMBL CF328124 [ TTCCTTTTGAATCCAAAGGATAAAGACTTTATTCTCAAGGAACTAACTTTATCTACTCTTTCAAGCCTCATAT ATTCTGAACATTTTGTCCAGGAACAAACTTTGGCACTGGTGCACAATCTTGTTGATGGATATGTGAACTCTTTTAATTATGTCATTGGTGAAGATGGCATGATTTTAAATGCTATTTCAAGACAACTGAATAATGCACCTGCCCCAGGAGTATGCATACAGGG TATGTTTGTGCTTGCAAATGTTGCAGCTGGGGGCGAATTAAACAAGGAGGCTGTGATGAATATTCTTGTACCTCGTCGAGCAGATCGTGTCAAACAATCTTTTATAGTTAACTTTCTGCTGAGCAAGGACAAACAATTGAGAGTTGCAACCTTGT GGTGTGTTCTGAACTTGATTTATCCAAAATGTGAGG CCTCTTCTGTTCGAGTTGTCAGA CT CCAAAATGCTGGGGTAATTTCACAAGTAAAAGGCATGATAAATGATCCCTGCTTGGATTGCAAGCTTAGAGTACGCATGGTGCTTGAACACTGCTTGGACAATGCCGACGATGGTTTCATGTGAGCAGCCGCCATTGCACCTCGGGCCATTGAAGCTTGCAGAATCAAACA ] [+] EMBL AK062181 [ ACTTTATCTACTCTTTCAAGCCTCATATGTGATTCTGAACATTTTGTCCAGGAACAAACTTTGGCACTGGTGCACAATCTTGTTGATGGATATGTGAACTCTTTTAATTATGTCATTGGTGAAGATGGCATGATTTTAAATGCTATTTCAAGACAACTGAATAATGCACCTGCCCCAGGAGTATGCATACAGGG TATGTTTGTGCTTGCAAATGTTGCAGCTGGGGGCGAATTAAACAAGGAGGCTGTGATGAATATTCTTGTACCTCGTCGAGCAGATCGTGTCAAACAATCTTTTATAGTTAACTTTCTGCTGAGCAAGGACAAACAATTGAGAGTTGCAACCTTGT GGTGTGTTCTGAACTTGATTTATCCAAAATGTGAGG CCTCTTCTGTTCGAGTTGTCAGA CT CCAAAATGCTGGGGTAATTTCACAAGTAAAAGGCATGATAAATGATCCCTGCTTGGATTGCAAGCTTAGAGTACGCATGGTGCTTGAACACTGCTTGGACAATGCCGACGATGGTTTCATGTGAGCAGCCGCCATTGCACCTCGGGCCATTGAAGCTTGCAGAATCAAACACTGCTTGAGCAAAGAGAAGATGGAAGATTGATCTCTTCGCATCAGCAATCCGCGCCATGAACTGTGAACAATGATCATCCAGTAAAAAAAAGCCTTCACCGACATCTTCTCGTCGCCTCCAAGCCTGTCA TTGTAAATTTGGTGAA CTCCATGAGGACCATGACTGGTTTCTCTTGCAGAAAC AAG CAAGAAACCTTGTTGTAACCATGCCACGTC AGAAAACCTGAGCTGATTTCCTCCGAAACGGAAAAAGGTTTTAGGTGCTAGCTCTGGAGAAATTTCATTCCTTAGCATGACCAAAAACCTAGTGCTTGTGCTGTGACGATGAGTGGTGAGTGTATAATTGAGGGAGATATGCTACTGCTGCTGTAAATTGTACTACTCTCTTGGGCTATGTTTTTCACGTTCGGCCATGGGACGGTGCCCAGCAAGCAGTGTGTAATGGTTTTGCCGCTTGCTTTTGCTTCTCAATAAAGATAC ] [-] EMBL CB628610 [ CGTGTCAAACAATCTTTTATAGTTAACTTTCTGCTGAGCAAGGACAAACAATTGAGAGTTGCACCCTTGT GGTGTGTTCTGAACTTGATTTATCCAAAATGTGAGG CCTCTTCTGTTCGAGTTGTCAGA CT CCAAAATGCTGGGGTAATTTCACAAGTAAAAGGCATGATAAATGATCCCTGCTTGGATTGCAAGCTTAGAGTACGCATGGTGCTTGAACACTGCTTGGACAATGCCGACGATGGTTTCATGTGAGCAGCCGCCATTGCCCCTCGGGCCATTGAAGCTTGCAGAATCAAACACTGCTTGAGCAAAGAGAAGATGGAAGATTGATCTCTTCGCATCAGCAATCCGCGCCATGAACTGTGAACAATGATCATCCAGTAAAAAAAAGCCTTCACCGACATCTTCTCGTCGCCTCCAAGCCTGTCA TTGTAAATTTGGTGAA CTCCATGAGGACCATGACTGGTTTCTCTTGCAGAAAC AAG CAAGAACCCTTGTTGTAACCATGCCACGTC AGAAACCCTGAGCTGATTTCCTCCGAAACGGAAAAAGGTTTTAGGTGCTAGCTCTGGAGAAATTTCATTCCTTAGCATGCCCAAAACCCTAGTGCTTGTGCTGTGACGATGAGTGGTGAGTGTATAATTGAGGGAGATATGCTACTGCTGCTGTAAATTGTACTACTCTCTTGGGCTATGTTTTTCACGTTCGGCCATGGGACG ] [-] EMBL CB639020 [ AAACAATTGAGAGTTGCAACCTTGT GGTGTGTTCTGAACTTGATTTATCCAAAATGTGAGG CCTCTTCTGTTCGAGTTGTCAGA CT CCAAAATGCTGGGGTAATTTCACAAGTAAAAGGCATGATAAATGATCCCTGCTTGGATTGCAAGCTTAGAGTACGCATGGTGCTTGAACACTGCTTGGACAATGCCGACGATGGTTTCATGTGAGCAGCCGCCATTGCACCTCGGGCCATTGAAGCTTGCAGAATCAAACACTGCTTGAGCAAAGAGAAGATGGAAGATTGATCTCTTCGCATCAGCAATCCGCGCCATGAACTGTGAACAATGATCATCCAGTAAAAAAAAGCCTTCACCGACATCTTCTCGTCGCCTCCAAGCCTGTCA TTGTAAATTTGGTGAA CTCCATGAGGACCATGACTGGTTTCTTTTGCAGAAAC AAG CAAGAAACCTTGTTGTAACCATGCCACGTC AGAAAA CTGAaaatga ] [+] EMBL AU085876 [ AAATGTGAGGCCCTCTTCTGTNCGAGTTGTCAGA CTCCCAAAATGCTGGGGTAATTTCACAAGT AAAGGCATGATAAATGATCCCTGCTTGGATTGCAAGCTTAGAGTACGCATGGTGCTTGAACACTGCTTGGACAATGCCGACGATGGTTTCATGTGAGCAGCCGCCATTGCACCTCGGGCCATTGAAGCTTGCAGAATCAAACACTGCTTGAGCAAAGAGAAGATGGAAGATTGATCTCTTCGCATCAGCAATCCGCGCCATGAACTGTGAACAATGATCATCCAGTAAAAAAAAGCCTTCACCGACATCTTCTCGTCGCCTCCAAGCCTGTCA TTGTAAATTTGGTGAA CTCCATGAGGACCATGACTGGTTTCTCTTGCAGAAAC AAG CAAGAAACCTTGTTGTAACCATGCCACGTC AGAAAACCTGAGCTGATTTCCTCCGAAACGGAAAAAGGTTTTAGGTGCTAGCTCTGGAGAAATTTCATTCCTTAGCATGACCAAAAACCTAGTGCTTGTGCTGTGACGATGAGTGGTGAGTGTATAATTGAGGGAGATATGCTACTGCTGCTGTAAATTGTACTACTCTCTTGGGCTATGTTTTTCACGTTCGGCCATGGGACGGTGCCCAGCAAGCAGTGTGTAATGGTTTTGCCGCTTGCTTTTGCTTCTCAATAAAGATACTACTCTTGACAAAAAA ] [-] EMBL CF328123 [ TGATAAATGATCCCTGCTTGGATTGCAAGCTTAGAGTACGCATGGTGCTTGAACACTGCTTGGACAATGCCGACGATGGTTTCATGTGAGCAGCCGCCATTGCACCTCGGGCCATTGAAGCTTGCAGAATCAAACACTGCTTGAGCAAAGAGAAGATGGAAGATTGATCTCTTCGCATCAGCAATCCGCGCCATGAACTGTGAACAATGATCATCCAGTAAAAAAAAGCCTTCACCGACATCTTCTCGTCGCCTCCAAGCCTGTCA TTGTAAATTTGGTGAA CTCCATGAGGACCATGACTGGTTTCTCTTGCAGAAAC AAG CAAGAAACCTTGTTGTAACCATGCCACGTC AGAAAACCTGAGCTGATTTCCTCCGAAACGGAAAAAGGTTTTAGGTGCTAGCTCTGGAGAAATTTCATTCCTTAGCATGACC AAAACCTAGTGCTTGTGCTGTGACGATGAGTGGTGAGTGTATAATTGAGGGAGATATGCTACTGCTGCTGTAAATTGTACTACTCTCTTGGGCTATGTTTTTCACGTTCGGCCATGGGACGGTGCCCAGCAAGCAGTGTGTAATGGTTTTGCCGCTTGCTTTTGCTTCTCAATAAAGATACTACTCTTGACAAAAAAA ] [+] EMBL BI118670 [ GCTTGAACACTGCTTGGACAATGCCGACGATGGTTTCATGTGAGCAGCCGCCATTGCACCTCGGGCCATTGAAGCTTGCAGAATCAAACACTGCTTGAGCAAAGAGAAGATGGAAGATTGATCTCTTCGCATCAGCAATCCGCGCCATGAACTGTGAACAATGATCATCCAGTAAAAAAAAGCCTTCACCGACATCTTCTCGTCGCCTCCAAGCCTGTCA TTGTAAATTTGGTGAA CTCCATGAGGACCATGACTGGTTTCTCTTGCAGAAAC AAG CAAGAAACCTTGTTGTAACCATGCCACGTC AGAAAACCTGAGCTGATTTCCTCCGAAACGGAAAAAGGTTTTAGGTGCTAGCTCTGGAGAAATTTCATTCCTTAGCATGACCAAAAACCTAGTGCTCGTGCTGTGACGATGAGTGGTGAGTGTATAATTGAGGGAGATATGCTACTGCTGC ] [+] EMBL BI804642 [ TTCACCGACATCTTCTCGTCGCCTCCAAGCCTGTCA TTGTAAATTTGGTGAA CTCCATGAGGACCATGACTGGTTTCTCTTGCAGAAAC AAG CAAGAAACCTTGTTGTAACCATGCCACGTC AGAAAACCTGAGCTGATTTCCTCCGAAACGGAAAAAGGTTTTAGGTGCTAGCTCTGGAGAAATTTCATTCCTTAGCATGACCAAAAACCTAGTGCTTGTGCTGTGACGATGAGTGGTGAGTGTATAATTGAGGGAGATATGCTACTGCTGCTGTAAATTGTACTACTCTCTTGGGCTATGTTTTTCACGTTCGGCCATGGGACGGTGCCCAGCAAGCAGTGTGTAATGGTTTTGCCGCTTGCTTTTGCTTCTC ATAAAGATACTACTCTTGACAAAA ] [+] EMBL BI802749 [ TTCACCGACATCTTCTCGTCGCCTCCAAGCCTGTCAGTTGTAAATTTGGTGAA CTCCATGAGGACCATGACTGGTTTCTCTTGCAGAAAC AAG CAAGAAACCTTGTTGTAACCATGCCACGTCAAGAAAACCTGAGCTGATTTCCTCCGAAACGGAAAAAGGTTTTAGGTGCTAGCTCTGGAGAAATTTCATTCCTTAGCATGACCAAAAACCTAGTGCTTGTGCTGTGACGATGAGTGGTGAGTGTATAATTGAGGGAGATATGCTACTGCTGCTGTAAATTGTACTACTCTCTTGGGCTATGTTTTTCACGTTCGGCCATGGGACGGTGCCCAGCAA CAGTGTGTAATGGTTTT CCGCTTGCTTTTGCTTCTCAATAAAGATACTACTCTTGACAAAA ] [-] EMBL OSC107781 [ TAAA TTGGTGAACCCCCATGGGGCCCATGACTGGNTTCNCTTGCAGAAACAAAGCCAAGAAACCTTGTTGTAACCATGCCACGTC AGAAAACCTGAGCTGATTTCCTCCGAAACGGNAAAAGGNTTTAGGTGCTANCTCTGGAGAAANTTCANTCCTTAGCATGACCAAAAACCTAGTGCTTGTGCTGTGACGATGANTGGTGANTGTATAANTGAGGGAGATATGCTACTGCTGCTGTAAANTGTACTACTCTCTTGGGCTATGTTTTTCACGTTCGGCCATGGGNCGGTGCCCAGCAANCAGTGTGTAATGGTTTTGCCGCTTGCTTTTGCTTCTCAATAAAGATACTACTCTTNACAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CA754630 [ AGCTGATTTCCTCCGAAACGGAAAAAGGTTTTAGGTGCTAGCTCTGGAGAAATTTCATTCCTTAGCATGACCAAAAACCTAGTGCTTGTGCTGTGACGATGAGTGGTGAGTGTATAATTGAGGGAGATATGCTACTGCTGCTGTAAATTGTACTACTCTCTTGGGCTATGTTTTTCACGTTCGGCCATGGGACGGTGCCCAGCAAGCAGTGTGTAATGGTTTTGCCGCTTGCTTTTGCTTCTCAATAAAGATACTACTCTTGACAAAAAAAAAAA ] consensusID : consensus_14505#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 265 fasta sequence [TTTTGTATGACTCGTCTATGTNNNTTCAGGTTGCTGCCCTTGGTGCTATTTGCAATATTGCTGTGAATTTAACACCCAGGAAATCGATTCTTCTTCAATCTGGGGCTGTCTCCCAGCTTGTTCATTTGTCCAAGTCTATGGATCNNNNATTGANNTTAAAAGCTGTGTGGGCTCTTNNNAATATTATGTTCCTTTTGAATCCAAAGGATAAAGACNNNATTCTNANGGAACTAACTTTATCTACTCTNNNNNGCCTCNNATNTGN] [+] EMBL CF196683 [TTTTGTATGACTCGTCTATGTNNNTTCAGGTTGCTGCCCTTGGTGCTATTTGCAATATTGCTGTGAATTTAACACCCAGGAAATCGATTCTTCTTCAATCTGGGGCTGTCTCCCAGCTTGTTCATTTGTCCAAGTCTATGGATCNNNNATTGANNTTAAAAGCTGTGTGGGCTCTTNNNAATATTATGTTCCTTTTGAATCCAAAGGATAAAGACNNNATTCTNANGGAACTAACTTTATCTACTCTNNNNNGCCTCNNATNTGN] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14505#0 GACGACGGCGTGCGGGCCGTGCTCGCCGCCGGGGCCGTGGCCCACCTGACGCGGCTCCTC 60 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 GCCCACCCCGACGAGAAGGTTGTTGATGCTAGTGCACGTGCTCTGAGAATGATTTATCAA 120 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 TCGAAACTAGCTCCAAAGTTTGATGTCAACAATAATGAGAAAAACATGGAATTTCTTCTT 180 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 ACCCTTTTGAACAGCGAGAATGAAAATGTCACAGAGCTTGCTGCCAATATTATATCTCAC 240 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 TCTTGTGATAGCACTACAGAACAATTAGCACTATGTCTGCTGGAGTTCCGCAGAGACTTG 300 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 TTAACCATTTTGGAGGCTCCATGAATCTACGGGATGCTTGCTTAGATTCTTTGACTGCAA 360 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 TCATAAGAAATAACTGGGAAGTTGCTTCAAGATTTGCACTGCTGGACCATGGAAAAGCTT 420 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 TGCGCTCAATAGTTGCATTAATACATGATCGGAGCCCACGCACAAGACTACTTGCTTGTT 480 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 TGTGCTTGATTGCGCTTAGCCATGCTTCTCCCTGTCACTNTCAAGACAGACAAATTAAAA 540 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 CCAAGTTGATCCTGGTCTTACTTGAGCTCATCGAGGAACCTGGTCATGTAGGAGATGATG 600 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 CTCCATTGGCATTGACAACCTTGATCAAAGACAGTGTGGAACTGCAGAAGCAAGCACTCT 660 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 CAACAAACGCAGTTCAGAAGTTAAGCAACCATCTTATAGCAAATTCGTTGGAGTCAAGGC 720 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 GTGCAGTGACCATATTGCTTGCTTTAGCTGAACTTTGCTCAAAATTGGAAGAATCAAGAT 780 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 CTCAACTTATGTCAGTTCAGGCATCTACCTTAATCCTTGATGCACTGAAGCATGCTTCTG 840 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 TTGATATCCGTGTTGCAGCATGTTCATGTCTTAAGAATATCTCTAGGTCATCCAAAGTAC 900 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 TTAGTGCTGGGAAATTATCCTGTGATACATTTATTGCCCCACTAGTCCAGCTTTTGTATG 960 consensus_14505#1 ---------------------------------------------------TTTTGTATG 9 ********* consensus_14505#0 ACTCGTCTATGTCAGTTCAGGTTGCTGCCCTTGGTGCTATTTGCAATATTGCTGTGAATT 1020 consensus_14505#1 ACTCGTCTATGTNNNTTCAGGTTGCTGCCCTTGGTGCTATTTGCAATATTGCTGTGAATT 69 ************ ********************************************* consensus_14505#0 TAACACCCAGGAAATCGATTCTTCTTCAATCTGGGGCTGTCTCCCAGCTTGTTCATTTGT 1080 consensus_14505#1 TAACACCCAGGAAATCGATTCTTCTTCAATCTGGGGCTGTCTCCCAGCTTGTTCATTTGT 129 ************************************************************ consensus_14505#0 CCAAGTCTATGGATCCAACATTGAGATTAAAAGCTGTGTGGGCTCTTAGGAATATTATGT 1140 consensus_14505#1 CCAAGTCTATGGATCNNNNATTGANNTTAAAAGCTGTGTGGGCTCTTNNNAATATTATGT 189 *************** ***** ********************* ********** consensus_14505#0 TCCTTTTGAATCCAAAGGATAAAGACTTTATTCTCAAGGAACTAACTTTATCTACTCTTT 1200 consensus_14505#1 TCCTTTTGAATCCAAAGGATAAAGACNNNATTCTNANGGAACTAACTTTATCTACTCTNN 249 ************************** ***** * ********************* consensus_14505#0 CAAGCCTCATATGTGATTCTGAACATTTTGTCCAGGAACAAACTTTGGCACTGGTGCACA 1260 consensus_14505#1 NNNGCCTCNNATNTGN-------------------------------------------- 265 ***** ** ** consensus_14505#0 ATCTTGTTGATGGATATGTGAACTCTTTTAATTATGTCATTGGTGAAGATGGCATGATTT 1320 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 TAAATGCTATTTCAAGACAACTGAATAATGCACCTGCCCCAGGAGTATGCATACAGGGTA 1380 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 TGTTTGTGCTTGCAAATGTTGCAGCTGGGGGCGAATTAAACAAGGAGGCTGTGATGAATA 1440 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 TTCTTGTACCTCGTCGAGCAGATCGTGTCAAACAATCTTTTATAGTTAACTTTCTGCTGA 1500 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 GCAAGGACAAACAATTGAGAGTTGCAACCTTGTGGTGTGTTCTGAACTTGATTTATCCAA 1560 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 AATGTGAGGCCTCTTCTGTTCGAGTTGTCAGACTCCAAAATGCTGGGGTAATTTCACAAG 1620 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 TAAAAGGCATGATAAATGATCCCTGCTTGGATTGCAAGCTTAGAGTACGCATGGTGCTTG 1680 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 AACACTGCTTGGACAATGCCGACGATGGTTTCATGTGAGCAGCCGCCATTGCACCTCGGG 1740 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 CCATTGAAGCTTGCAGAATCAAACACTGCTTGAGCAAAGAGAAGATGGAAGATTGATCTC 1800 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 TTCGCATCAGCAATCCGCGCCATGAACTGTGAACAATGATCATCCAGTAAAAAAAAGCCT 1860 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 TCACCGACATCTTCTCGTCGCCTCCAAGCCTGTCATTGTAAATTTGGTGAACTCCATGAG 1920 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 GACCATGACTGGTTTCTCTTGCAGAAACAAGCAAGAAACCTTGTTGTAACCATGCCACGT 1980 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 CAGAAAACCTGAGCTGATTTCCTCCGAAACGGAAAAAGGTTTTAGGTGCTAGCTCTGGAG 2040 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 AAATTTCATTCCTTAGCATGACCAAAAACCTAGTGCTTGTGCTGTGACGATGAGTGGTGA 2100 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 GTGTATAATTGAGGGAGATATGCTACTGCTGCTGTAAATTGTACTACTCTCTTGGGCTAT 2160 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 GTTTTTCACGTTCGGCCATGGGACGGTGCCCAGCAAGCAGTGTGTAATGGTTTTGCCGCT 2220 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 TGCTTTTGCTTCTCAATAAAGATACTACTCTTGACAAAAAAAAAAAAAAAAAAAAAAAAA 2280 consensus_14505#1 ------------------------------------------------------------ consensus_14505#0 AAA 2283 consensus_14505#1 --- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||