cluster # 14523

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Oryza sativa
cluster # 14523 cluster # 14523 Sequences # 17 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14523#0 length = 2016 sequences # 15

consensus_14523#1 length = 525 sequences # 2

consensusID : consensus_14523#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 2016
fasta sequence

                              [AGCCAAAACCAAACTCCATCACCTCCTCCTCCGTCTCCTTCCCCCACCATTTCTCCCCCAAATCCGTCTCCTCCTCCTCCCCCACCCAAATCTCCCACCTCCGCCGTCGCGGAATCCGCCGCGACGACCTCCCCTCGATCCGCCCGATCCGACCCCGGATCGGATCCCACCGTCGCCGCCCGCGCGCGTGGTGGTTGGGTGTGCGGGGTGTGCAAACCCTAGGTCTCCGATCCGGATCCCCCCCCCACCCACCCCGCCGATGGGCGCTGGCCGGGCTTGCCGCGGCGGCCCCTCCTCCTCCTCCCCCGCCGCTGCCGCCGCTGCGGTGGGGCGGCCGTTCCCTCCGATCGCCGCTTCGTGCCCCTTCTCGTCGTCTTCGGCGGCGGCTGCGGCCCCCGCGGCGCCTTCCGAGACGGCGTCGACGTCGGTGACCAAGACCGTGAACGGGTCGCACCACTTCAAGATCGCCGGGTACCCGCTGGCCAAGGGGATCGGGGTCGGGAAATACATCGCCTCCGAGTGCTTCACCGTCGGCGGCTACGACTGGGCGATCTACTTCTACCCCGACGGGAAGAGCCCCGAGGATGGCGCCGCCTACGTCTCGCTCTTCATAGCGCTCGCCAGCGAGGGCACCGACGTCCGCGCGCTCTTCGAGCTCACGCTCGTCGACCAGAGCGGCAAGGGGCAGGACAAGGTGCACACCCACTTTGGGAGGTCGCTCGAGGGCGGGCCATATACCCTCAAGTACCGGGGGAGCATGTGGGGTTACAAGCGTTTCTTCAAACGGTCTGCCTTGGAAACATCAGATTATCTTAAAGATGATTGCCTTTTGGTGAATTGTACTGTTGGTGTTGTCCAATCACATACTGAAGGGCCAAAGATATATACAATACCAGTGCCACCATCCAATATGTCTCAGCATATTGGCCAGCTACTGACGGATGGAAAGAGAACTGATATTACATTTGAAGTTGATGGAGAGGTGTTCCCTGCTCACAAGGTTGTTCTTGCAGCCCGGTCACCAGTTTTCAGGGCACAGCTTTTCGGTCCAATGAAGGATAAAAACATGAAGCGTATAACGATTGAGGATATGGAGGCTTCAGTTTTTAAGGCCTTACTCCATTTTATGTACTGGGATGAGTTGCCTGATATCGAAGAGCTTACTGGCCTAAATACAACTTGGGTATCCACTTTGATGGCTCAGCATTTACTTGCAGCTGCGGATCGTTATGCATTGGAGAGACTAAAGTTGCTCTGTGAGCTCAAGCTTTGTGAAGATGTTGCAATAAACACAGTTGCAAACACTTTGGCACTGGCTGAACAG-CACCACTGTTATCAGCT-AAAAACTGTTT-GCCT-GAGA-TTTGTGG-CTTTG-CCTG-AGAATTTAAAAGCTGTCATGCAAA-CCGATGGGTTTGATTA-TTTGCAGCAAAGCTG-CCCATCCTTGCTGACCGAGCTTCT-GGAGTATGTG-GCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTTGTATTCGAACGAAGTCCTT-GATGGTGGCGATGCCAATGGAAGACGTGTGAAACCGCGGATTTAACGGCAGCCCTGATAAAAACCTAGCTGGATTTCCTTGTGTTGTTTCCGTGTAAAGTGTTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATAT-CATG-CATGTTGTAGTGTCTTGTGACTTCTATACCTCCCCCTATCGTTGCTACTCTGGAGCTGAGTTGTTGCTAATATATGTGTTCTACTGACTAGTGTACTGCAAAATTGCATTGCTGCGAAGCACATGGAGCTTCGCAGCCTGTGACCATAAAGTGCACTCAGGTGGCACGGCAAAGGTGGACTGGGCGCAAGGTTTTGTCGGTGGAAATAACGGCGCAGAATGTTTCTATGGAAGTTTAACTTTGTGCTTAGGTCAGCTTTGTCGATTTGTAGTCGTCTGTATGACTGTAATTCAATTGGAATGGTGAAATGCAATGAAATGTATCGGTTAGATCGAGTCAAACCTTAAAAGG]

[+] EMBL AK073258             [AGCCAAAACCAAACTCCATCACCTCCTCCTCCGTCTCCTTCCCCCACCATTTCTCCCCCAAATCCGTCTCCTCCTCCTCCCCCACCCAAATCTCCCACCTCCGCCGTCGCGGAATCCGCCGCGACGACCTCCCCTCGATCCGCCCGATCCGACCCCGGATCGGATCCCACCGTCGCCGCCCGCGCGCGTGGTGGTTGGGTGTGCGGGGTGTGCAAACCCTAGGTCTCCGATCCGGATCCCCCCCCCACCCACCCCGCCGATGGGCGCTGGCCGGGCTTGCCGCGGCGGCCCCTCCTCCTCCTCCCCCGCCGCTGCCGCCGCTGCGGTGGGGCGGCCGTTCCCTCCGATCGCCGCTTCGTGCCCCTTCTCGTCGTCTTCGGCGGCGGCTGCGGCCCCCGCGGCGCCTTCCGAGACGGCGTCGACGTCGGTGACCAAGACCGTGAACGGGTCGCACCACTTCAAGATCGCCGGGTACCCGCTGGCCAAGGGGATCGGGGTCGGGAAATACATCGCCTCCGAGTGCTTCACCGTCGGCGGCTACGACTGGGCGATCTACTTCTACCCCGACGGGAAGAGCCCCGAGGATGGCGCCGCCTACGTCTCGCTCTTCATAGCGCTCGCCAGCGAGGGCACCGACGTCCGCGCGCTCTTCGAGCTCACGCTCGTCGACCAGAGCGGCAAGGGGCAGGACAAGGTGCACACCCACTTTGGGAGGTCGCTCGAGGGCGGGCCATATACCCTCAAGTACCGGGGGAGCATGTGGGGTTACAAGCGTTTCTTCAAACGGTCTGCCTTGGAAACATCAGATTATCTTAAAGATGATTGCCTTTTGGTGAATTGTACTGTTGGTGTTGTCCAATCACATACTGAAGGGCCAAAGATATATACAATACCAGTGCCACCATCCAATATGTCTCAGCATATTGGCCAGCTACTGACGGATGGAAAGAGAACTGATATTACATTTGAAGTTGATGGAGAGGTGTTCCCTGCTCACAAGGTTGTTCTTGCAGCCCGGTCACCAGTTTTCAGGGCACAGCTTTTCGGTCCAATGAAGGATAAAAACATGAAGCGTATAACGATTGAGGATATGGAGGCTTCAGTTTTTAAGGCCTTACTCCATTTTATGTACTGGGATGAGTTGCCTGATATCGAAGAGCTTACTGGCCTAAATACAACTTGGGTATCCACTTTGATGGCTCAGCATTTACTTGCAGCTGCGGATCGTTATGCATTGGAGAGACTAAAGTTGCTCTGTGAGCTCAAGCTTTGTGAAGATGTTGCAATAAACACAGTTGCAAACACTTTGGCACTGGCTGAACAG CACCACTGTTATCAGCT AAAAACTGTTT GCCT GAGA TTTGTGG CTTTG CCTG AGAATTTAAAAGCTGTCATGCAAA CCGATGGGTTTGATTA TTTGCAGCAAAGCTG CCCATCCTTGCTGACCGAGCTTCT GGAGTATGTG GCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTTGTATTCGAACGAAGTCCTT GATGGTGGCGATGCCAATGGAAGACGTGTGAAACCGCGGATTTAACGGCAGCCCTGATAAAAACCTAGCTGGATTTCCTTGTGTTGTTTCCGTGTAAAGTGTTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATAT CATG CATGTTGTAGTGTCTTGTGACTTCTATACCTCCCCCTATCGTTGCTACTCTGGAGCTGAGTTGTTGCTAATATATGTGTTCTAC                                                                                                                                                                                                                                                                           ]
[+] EMBL CB637204             [                 ATCACCTCCTCCTCCGTCTCCTTCCCCCACCATTTCTCCCCCAAATCCGTCTCCTCCTCCTCCCCCACCCAAATCTCCCACCTCCGCCGTCGCGGAATCCGCCGCGACGACCTCCCCTCGATCCGCCCGATCCGACCCCGGATCGGATCCCACCGTCGCCGCCCGCGCGCGTGGTGGTTGGGTGTGCGGGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB637640             [                      CTCCTCCTCCGTCTCCTTCCCCCACCATTTCTCCCCCAAATCCGTCTCCTCCTCCTCCCCCACCCAAATCTCCCACCTCCGCCGTCGCGGAATCCGCCGCGACGACCTCCCCTCGATCCGCCCGATCCGACCCCGGATCGGATCCCACCGTCGCCGCCCGCGCGCGTGGTGGTTGGGTGTGCGGGGTGTGCAAACCCTAcg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB672171             [                                                                             TCCCCCACCCAAATCTCCCACCTCCGCCGTCGCGGAATCCGCCGCGACGACCTCCCCTCGATCCGCCCGATCCGACCCCGGATCGGATCCCACCGTCGCCGCCCGCGCGCGTGGTGGTTGGGTGTGCGGGGTGTGCAAACCCTAGGTCTCCGATCCGGATCCCCCCCCCACCCACCCCGCCGATGGGCGCTGGGCGGGCTTGCCGCGGCGGCCCCTCCTCCTCCTCCCCCGCCGCTGCCGCCGCTGCGGTGGGGCGGCCGTTCCCTCCGATCGCCGCTTGGTGCCCCTTCTCGTCGTCTTCAGCGGCGGCTGCGGCCCCCGCGGCGCCTTCCGAGACGGCGTCCACGTCGGTGACCAAGACCGTGAACGGGTCGCACCACTTCGAGATCGCCGGGTGCCCGCTGGCCGAGGGGATCGGGGTCGGGAAATACATCGCCTCCGAGTGCTTCACCGTCGGCGGCTGCGACTGGGCGATCTACTTCTAGCGCGACGGGAAGAGCCCCCAGGATGGCGCCGCCTACGTCTCGCTCTTCATAGCGCTGGCGGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB631569             [                                                                                                                                                                                                                                                                                                                                                                                                             GCGGCGCCTTCCGAGACGGCGTCGACGTCGGTGACCAAGACCGTGAACGGGTCGCACCACTTCAAGATCGCCGGGTACCCGCTGGCCAAGGGGATCGGGGTCGGGAAATACATCGCCTCCGAGTGCTTCACCGTCGGCGGCTACGACTGGGCGATCTACTTCTACCCCGACGGGAAGAGCCCCGAGGATGGCGCCGCCTACGTCTCGCTCTTCATAGCGCTCGCCAGCGAGGGCACCGACGTCCGCGCGCTCTTCGAGCTCACGCTCGTCGACCAGAGCGGCAAGGGGCAGGACAAGGTGCACACCCACTTTGGGAGGTCGCTCGAGGGCGGGCCATATACCCTCAAGTACCGGGGGAGCATGTGGGGTTACAAGCGTTTCTTCAAACGGTCTGCCTTGGAAACATCAGATTATCTTAAAGATGATTGCCTTTTGGTGAATTGTACTGTTGGTGTTGTCCAATCACATACTGAAGGGCCAAAGATATATACAATACCAGTGCCACCATCCAATATGTCTCAGCATATTGGCCAGCTACTGATGGATGGAAAGAGAACTGATATTACATTTGAAGTTGATGGAGAGGTGTTCCCTGCTCACAAGGTTGTTCTTGCAGCCCGGTCACCAGTTTTCAGGGCACAGCTTTTCGGTCCAATGAAGGATAAAAACATGAAGCGTATAACGATTGAGGATATGGAGGCTTCAGTTTTTAAGGCCTTACTCCATTTTATGTACTGGGATGAGTTGCCTGATATCGAAGAGCTTACTGGCCTAAATACAACTTGGGTATCCACTTTGATGGCTCAGCATTTACTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB671163             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAGGGCCAAAGATATATACAATACCAGTGCCACCATCCAATATGTCTCAGCATATTGGCCAGCTACTGACGGATGGAAAGAGAACTGATATTACATTTGAAGTTGATGGAGAGGTGTTCCCTGCTCACAAGGTTGTTCTTGCAGCCCGGTCACCAGTTTTCAGGGCACAGCTTTTCGGTCCAATGAAGGATAAAAACATGAAGCGTATAACGATTGAGGATATGGAGGCTTCAGTTTTTAAGGCCTTACTCCATTTTATGTACTGGGATGAGTTGCCTGATATCGAAGAGCTTACTGGCCTAAATACAACTTGGGTATCCACTTTGATGGCTCAGCATTTACTTGCAGCTGCGGATCGTTATGCATTGGAGAGACTAAAGTTGCTCTGTGAGCTCAAGCTTTGTGAAGATGTTGCAATAAACACAGTTGCAAACACTTTGGCACTGGCTGAACAG CACCACTGTTATCAGCT AAAAACTGTTT GCCT GAGA TTTGTGG CTTTG CCTG AGAATTTAAAAGCTGTCATGCAAA CCGATGGGTTTGATTA TTTGCAGCAAAGCTG CCCATCCTTGCTGACCGAGCTTCT GGAGTATGTG GCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTTGTATTCGAACGAAGTCCTT GATGGTGGCGATGCCAATGGAAGACGTGTGAAACCGCGGATTTAACGGCAGCCCTGATAAAAACCTAGCTGGATTTCCTTGTGTTGTTTCCGTGTAAAGTGTTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATAT CATG CATGTTGTAGTGTCTTGTGACTTCTATA CTCCCCCTATCGTTGCT                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU056959             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AACGATTGAGGATATGGAGGCTTCAGTTTTTAAGGCCTTACTCCATTTTATGTACTGGGATGAGTTGCCTGATATCGAAGAGCTTACTGGCCTAAATACAACTTGGGTATCCACTTTGATGGCTCAGCATTTACTTGCAGCTGCGGATCGTTATGCATTGGAGAGACTAAAGTTGCTCTGTGAGCTCAAGCTTTGTGAAGATGTTGCAATAAACACAGTTGCAAACACTTTGGCACTGGCTGAACAG CACCACTGTTATCAGCT AAAAACTGTTT GCCT GAGA TTTGTGG CTTTG CCTG AGAATTTAAAAGCTGTCATGCAAA CCGATGGGTTTGATTA TTTGCAGCAAAGCTG CCCATCCTTGCTGACCGAGCTTCTGGGAGTATGTG GCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTTGTATTCGAACGAAGTCCTTGGATGGTGGCGATGCCAATGGAAGACGTGTGAAACCGCGGATTTAACGGCAGCCCTGATAAAAACCTAGCTGGATTTCCTTGTGTTGTTTCCGTGTAAAGTGTTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATAT CATG CATGTTGTAGTGTCTTGTGACTTCTATACCTCCCCCTATCGTTGCNACTCTGGAGCTGAGTTGTTGCTAATATATGTGTTCTACTGACTAGTGTACTGCAAAATTGCATT                                                                                                                                                                                                                                                 ]
[+] EMBL AU031303             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCCTTACTCCATTTTATGTACTGGGATGAGTTGCCTGATATCGAAGAGCTTACTGGCCTAAATACAACTTGGGTATCCACTTTGATGGCTCAGCATTTACTTGCAGCTGCGGATCGTTATGCATTGGAGAGACTAAAGTTGCTCTGTGAGCTCAAGCTTTGTGAAGATGTTGCAATAAACACAGTTGCAAACACTTTGGCACTGGCTGAACAG CACCACTGTTATCAGCT AAAAACTGTTT GCCT GAGA TTTGTGG CTTTG CCTG AGAATTTAAAAGCTGTCATGCAAA CCGATGGGTTTGATTA TTTGCAGCAAAGCTG CCCATCCTTGCTGACCGAGCTTCT GGAGTATGTG GCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTTGTATTCGAACGAAGTCCTTGGATGGTGGCGATGCCAATGGAAGACGTGTGAAACCGCGGATTTAACGGCAGCCCTGATAAAAACCTAGCTGGATTTCCTTGTGTTGTTTCCGTGTAAAGTGTTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATAT CATG CATGTTGTAGTGTCTTGTGACTTCTATACCTCCCCCTATCGnngc                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB631570             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CACTTTGATGGCTCAGCATTTACTTGCAGCTGCGGATCGTTATGCATTGGAGAGACTAAAGTTGCTCTGTGAGCTCAAGCTTTGTGAAGATGTTGCAATAAACACAGTTGCAAACACTTTGGCACTGGCTGAACAG CACCACTGTTATCAGCT AAAAACTGTTT GCCT GAGA TTTGTGG CTTTG CCTG AGAATTTAAAAGCTGTCATGCAAA CCGATGGGTTTGATTA TTTGCAGCAAAGCTG CCCATCCTTGCTGACCGAGCTTCT GGAGTATGTG GCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTTGTATTCGAACGAAGTCCTT GATGGTGGCGATGCCAATGGAAGACGTGTGAAACCGCGGATTTAACGGCAGCCCTGATAAAAACCTAGCAGGATTTCCTTGTGTTGTTTCCGTGTAAAGTGTTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATAT CATG CATGTTGTAGTGTCTTGTGACTTCTATACCTCCCCCTATCGTTGCTACTCTGGAGCTGAGTTGTTGCTAATATATGTGTTCTACTGACTAGTGTACTGCAAAATTGCATTGCTGCGAAGCACATGGAGCTTCGCAGCCTGTGACCATAAAGTGCACTCAGGTGGCACGGCAAAGGTGGACTGGGCGCAAGGTTTTGTCGGTGGAAATAACGGTGCAGAATGTTTCTATGGAAGTTTAACTTTGTGCTTAGGTCAGCTTTGTCGATTTGTAGTCGTCTGTATGACTGTAATTCAATTGGAATGGTGAAATGCAATGAAATGTATCGGTTGGATCGA                ]
[-] EMBL CB671164             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTGCAGCTGCGGATCGTTATGCATTGGAGAGACTAAAGTTGCTCTGTGAGCTCAAGCTTTGTGAAGATGTTGCAATAAACACAGTTGCAAACACTTTGGCACTGGCTGAACAG CACCACTGTTATCAGCT AAAAACTGTTT GCCT GAGA TTTGTGG CTTTG CCTG AGAATTTAAAAGCTGTCATGCAAA CCGATGGGTTTGATTA TTTGCAGCAAAGCTG CCCATCCTTGCTGACCGAGCTTCT GGAGTATGTG GCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTTGTATTCGAACGAAGTCCTT GATGGTGGCGATGCCAATGGAAGACGTGTGAAACCGCGGATTTAACGGCAGCCCTGATAAAAACCTAGCTGGATTTCCTTGTGTTGTTTCCGTGTAAAGTGTTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATAT CATG CATGTTGTAGTGTCTTGTGACTTCTATACCTCCCCCTATCGTTGCTACTCTGGAGCTGAGTTGTTGCTAATATATGTGTTCTACTGACTAGTGTACTGCAAAATTGCATTGCTGCGAAGCACATGGAGCTTCGCAGCCTGTGACCATAAAGTGCACTCAGGTGGCACGGCAAAGGTGGACTGGGCGCAAGGTTTTGTCGGTGGAAATAACGGCGCAGAATGTTTCTATGGAAGTTTAACTTTGTGCTTAGGTCAGCTTTGTCGATTTGTAGTCGTCTGTATGACTGTAATTCAATTGGAATGGTGAAGTGCAATGAAATGTATCGGTTAGATCGTGTCA            ]
[-] EMBL CB672172             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ATCGTTATGCATTGGAGAGACTAAAGTTGCTCTGTGAGCTCAAGCTTTGTGAAGATGTTGCAATAAACACAGTTGCAAACACTTTGGCACTGGCTGAACAG CACCACTGTTATCAGCT AAAAACTGTTT GCCT GAGA TTTGTGG CTTTG CCTG AGAATTTAAAAGCTGTCATGCAAA CCGATGGGTTTGATTA TTTGCAGCAAAGCTG CCCATCCTTGCTGACCGAGCTTCT GGAGTATGTG GCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTTGTATTCGAACGAAGTCCTT GATGGTGGCGATGCCAATGGAAGACGTGTGAAACCGCGGATTTAACGGCAGCCCTGATAAAAACCTAGCTGGATTTCCTTGTGTTGTTTCCGTGTAAAGTGTTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATAT CATG CATGTTGTAGTGTCTTGTGACTTCTATACCTCCCCCTATCGTTGCTACTCTGGAGCTGAGTTGTTGCTAATATATGTGTTCTACTGACTAGTGTACTGCAAAATTGCATTGCTGCGAAGCACATGGAGCTTCGCAGCCTGTGACCATAAAGTGCACTCAGGTGGCACGGCAAAGGTGGACTGGGCGCAAGGTTTTGTCGGTGGAAATAACGGCGCAGAATGTTTCTATGGAAGTTTAACTTTGTGCTTAGGTCAGCTTTGTCGATTTGTAGTCGTCTGTATGACTGTAATTCAATTGGAATGGTGAAAAGGAATGAAATGTATCGGTTAGATCGTGTCAAACCTTAAAAGG]
[+] EMBL C28346               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GCAAACACTTTGGCACTGGCTGAACAG CACCACTGTTATCAGCT AAAAACTGTTT GNCT GAGA TTTGTGG CTTTG CCTG AGAATTTAAAAGCTGTCATGCAAA CCGATGGGTTTGATTA TTTGCAGCAAAGCTN CCCATCCTTGCTGACCGAGCTTCT GGAGTATGTG GCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTTGTATTCGAACG AGTCCTT GATGGTGGCGATGCCAATGG AGNCGTGTG AACCGCGGATTTAACGGCAG CCTGAT AAAACCTAGCTGGA TTCCTTGTGTTGTTTCCGTGT AAGTGTTATAG TCTATAACGGCAC TTTCTGGNGCCATA TATAT CATG CATGTTGTAGTGNCTTGTGACTTCTATACCT CCCCTATCG TGCTACTCTGGNGCTGAG                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU056960             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGGCTGAACAGCCACCACTGTTATCAGCTAAAAAACTGTTTNCCCTGGAGATTTTGTGGCCTTTGCCCTGAAGAATTTAAAAGCTGTCATGCAAACCCGATGGGTTTGATTATTTTGCAGCAAAGCTGCCCCANCCTTGCTGACCGAGCTTCT GGAGTATGTGNCCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTTGTATTCGAACGAAGTCCTT GATGGTGGCGATGCCAATGGAAGACGTGTGAAACCGCGGATTTAACGGCAGCCCTGATAAAAACCTAGCTGGATTTCCTTGTGTTGTTTCCGTGTAAAGTGTTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATATCCATGCCATGTTGTAGTGTCTTGTGACTTCTATACCTCCCCCTATCGTTGCTACTCTGGAGCTGAGTTGTTGCTAATATATGTGTTCTACTGACTAGTGTACTGCAAAATTGCATTGCTGCGAAGCACATGGAG TTCGCAGCCTGTGACCATAAAGTGCACTCAGGTGGCACGGCAAAGGTGGACTGGGCGCAAGGTTTTGTCGGTGGAAATAACGGCGCAGAATGTTTCTATGGAAGTTTAACTTTGTGCTTAGGTCAGCTTTGTCGATTTGTAGTCGTCTGTATGACTGTAATTCAATTGGAATGGTGAAATGCAATGAAATGTATCGGTTAaaaaaaa               ]
[-] EMBL CB637641             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATCCTTTTTGACGGAGCTTTT GGAGTATGTG GCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTTGTATTCGAACGAAGTCCTT GATGGTGGCGATGCCAATGGAAGACGTGTGAAACCCCGGATTTAACGGCAGCCCTGATAAAAACCTAGCTGGATTTCCTTGTGTTGTTTCCGTGTAAAGTGTTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATAT CATG CATGTTGTAGTGTCTTGTGACTTCTATACCTCCCCCTATCGTTGCTACTCTGGAGCTGAGTTGTTGCTAATATATGTGTTCTACTGACTAGTGTACTGCAAAATTGCATTGCTGCGAAGCACATGGAGCTTCGCAGCCTGTGACCATAAAGTGCACTCAGGTGGCACGGCAAAGGTGGACTGGGCGCAAGGTTTTGTCGGTGGAAATAACGGCGCAGAATGTTTCTATGGAAGTTTAACTTTGTGCTTAGGTCAGCTTTGTCGATTTGTAGTCGTCTGTATGACTGTAATTCAATTGGAATGGTGAAATGCAATGAAATG                               ]
[+] EMBL CB671974             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CGGCACCTTTCTGGTGCCATATTATAT CATG CATGTTGTAGTGTCTTGTGACTTCTATACCTCCCCCTATCGTTGCTACTCTGGAGCTGAGTTGTTGCTAATATATGTGTTCTACTGACTAGTGTACTGCAAAATTGCATTGCTGCGAAGCACATGGAGCTTCGCAGCCTGTGACCATAAAGTGCACTCAGGTGGCACGGCAAAGGTGGACTGGGCGCAAGGTTTTGTCGGTGGAAATAACGGCGCAGAATGTTTCTATGGAAGTTTAACTTTGTGCTTAGGTCAGCTTTGTCGATTTGTAGTCGTCTGTATGACTGTAATTCAATTGGAATGGTGAAATGCAATGAAATGTATCGGTT                       ]




>consensus_14523#0
AGCCAAAACCAAACTCCATCACCTCCTCCTCCGTCTCCTTCCCCCACCATTTCTCCCCCA
AATCCGTCTCCTCCTCCTCCCCCACCCAAATCTCCCACCTCCGCCGTCGCGGAATCCGCC
GCGACGACCTCCCCTCGATCCGCCCGATCCGACCCCGGATCGGATCCCACCGTCGCCGCC
CGCGCGCGTGGTGGTTGGGTGTGCGGGGTGTGCAAACCCTAGGTCTCCGATCCGGATCCC
CCCCCCACCCACCCCGCCGATGGGCGCTGGCCGGGCTTGCCGCGGCGGCCCCTCCTCCTC
CTCCCCCGCCGCTGCCGCCGCTGCGGTGGGGCGGCCGTTCCCTCCGATCGCCGCTTCGTG
CCCCTTCTCGTCGTCTTCGGCGGCGGCTGCGGCCCCCGCGGCGCCTTCCGAGACGGCGTC
GACGTCGGTGACCAAGACCGTGAACGGGTCGCACCACTTCAAGATCGCCGGGTACCCGCT
GGCCAAGGGGATCGGGGTCGGGAAATACATCGCCTCCGAGTGCTTCACCGTCGGCGGCTA
CGACTGGGCGATCTACTTCTACCCCGACGGGAAGAGCCCCGAGGATGGCGCCGCCTACGT
CTCGCTCTTCATAGCGCTCGCCAGCGAGGGCACCGACGTCCGCGCGCTCTTCGAGCTCAC
GCTCGTCGACCAGAGCGGCAAGGGGCAGGACAAGGTGCACACCCACTTTGGGAGGTCGCT
CGAGGGCGGGCCATATACCCTCAAGTACCGGGGGAGCATGTGGGGTTACAAGCGTTTCTT
CAAACGGTCTGCCTTGGAAACATCAGATTATCTTAAAGATGATTGCCTTTTGGTGAATTG
TACTGTTGGTGTTGTCCAATCACATACTGAAGGGCCAAAGATATATACAATACCAGTGCC
ACCATCCAATATGTCTCAGCATATTGGCCAGCTACTGACGGATGGAAAGAGAACTGATAT
TACATTTGAAGTTGATGGAGAGGTGTTCCCTGCTCACAAGGTTGTTCTTGCAGCCCGGTC
ACCAGTTTTCAGGGCACAGCTTTTCGGTCCAATGAAGGATAAAAACATGAAGCGTATAAC
GATTGAGGATATGGAGGCTTCAGTTTTTAAGGCCTTACTCCATTTTATGTACTGGGATGA
GTTGCCTGATATCGAAGAGCTTACTGGCCTAAATACAACTTGGGTATCCACTTTGATGGC
TCAGCATTTACTTGCAGCTGCGGATCGTTATGCATTGGAGAGACTAAAGTTGCTCTGTGA
GCTCAAGCTTTGTGAAGATGTTGCAATAAACACAGTTGCAAACACTTTGGCACTGGCTGA
ACAGCACCACTGTTATCAGCTAAAAACTGTTTGCCTGAGATTTGTGGCTTTGCCTGAGAA
TTTAAAAGCTGTCATGCAAACCGATGGGTTTGATTATTTGCAGCAAAGCTGCCCATCCTT
GCTGACCGAGCTTCTGGAGTATGTGGCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTT
GTATTCGAACGAAGTCCTTGATGGTGGCGATGCCAATGGAAGACGTGTGAAACCGCGGAT
TTAACGGCAGCCCTGATAAAAACCTAGCTGGATTTCCTTGTGTTGTTTCCGTGTAAAGTG
TTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATATCATGCATGTTGTAGTGTCT
TGTGACTTCTATACCTCCCCCTATCGTTGCTACTCTGGAGCTGAGTTGTTGCTAATATAT
GTGTTCTACTGACTAGTGTACTGCAAAATTGCATTGCTGCGAAGCACATGGAGCTTCGCA
GCCTGTGACCATAAAGTGCACTCAGGTGGCACGGCAAAGGTGGACTGGGCGCAAGGTTTT
GTCGGTGGAAATAACGGCGCAGAATGTTTCTATGGAAGTTTAACTTTGTGCTTAGGTCAG
CTTTGTCGATTTGTAGTCGTCTGTATGACTGTAATTCAATTGGAATGGTGAAATGCAATG
AAATGTATCGGTTAGATCGAGTCAAACCTTAAAAGG

consensusID : consensus_14523#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 525
fasta sequence

                              [AGACTAAAGTTGCTCTGTGAGCTCAAGC-TTTGTGAAGAT-GTTGCAATAAACACAGTTGCAAA-CACTTTGGCACTGGCTGAACAGCACCACTGTTATCAGCTAAAAACTGTTTGCCT-GAGATTTGTGGCTTTGCCTGAGAATTTAAAAGCTGT-CATGCAAACCGATGGGTTTGATTA-TTTGCAGCAAAGCTGCCCATCCTTGCTGACCGAGCTTCTGGAGTATGTGGCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTTGTATTCGAACGAAGTCCTTGATGGTGGCGATGCCCATGGAAGACGTGTGAAACCGCGGATTTAACGGCAGCCCTGATAAAAACCTAGCTGGATTTCCTTGTGTTGTTTCCGTGTAAAGTGTTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATATCATGCATGTTGTAGTGTCTTGTGACTTCTATACCTCCCCCTATCGTTGCTACTCTGGAGCTGAGTTGTTGCTAATATATGTGTTCTACTGACTAACANAAAAAA]

[+] EMBL CA754557             [AGACTAAAGTTGCTCTGTGAGCTCAAGC TTTGTGAAGAT GTTGCAATAAACACAGTTGCAAA CACTTTGGCACTGGCTGAACAGCACCACTGTTATCAGCTAAAAACTGTTTGCCT GAGATTTGTGGCTTTGCCTGAGAATTTAAAAGCTGT CATGCAAACCGATGGGTTTGATTA TTTGCAGCAAAGCTGCCCATCCTTGCTGACCGAGCTTCTGGAGTATGTGGCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTTGTATTCGAACGAAGTCCTTGATGGTGGCGATGCCCATGGAAGACGTGTGAAACCGCGGATTTAACGGCAGCCCTGATAAAAACCTAGCTGGATTTCCTTGTGTTGTTTCCGTGTAAAGTGTTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATATCATGCATGTTGTAGTGTCTTGTGACTTCTATACCTCCCCCTATCGTTGCTACTCTGGAGCTGAGTTGTTGCTAATATATGTGTTCTACTGACTAACANAAAAAA]
[+] EMBL AU031304             [                         AGCTTTTGTGAAGATGGTTGCAATAAACACANTTGCAAACCACTTTGGCACTGGCTGAACAGCACCACTGTTATCAGCTAAAAACTGTTNNCCTGGAGATTTGTGGCTTTGCCTGAGAATTTAAAAGCTGTCCATGCAAACCGATGGGTTTGATTATTTTGCAGCAAAGCTGCCCATCCTTGCTGACCGAGCTTCTGGAGTATGTGGCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTTGTATTCGAACGAAGTCCTTGATGGTGGCGATGCCAATGGAAGACGTGTGAAACCGCGGATTTAACGGCAGCCCTGATAAAAACCTAGCTGGATTTCCTTGTGTTGTTTCCGTGTAAAGTGTTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATATCATGCATGTTGTAGTGTCTTGTGACTTCTATACCTCCCCCTATCGTTGCTACTCTGGAGCTGAGTTGTTGCTAATATATGTGTTCTACTGACTAAAAAAAA   ]




>consensus_14523#1
AGACTAAAGTTGCTCTGTGAGCTCAAGCTTTGTGAAGATGTTGCAATAAACACAGTTGCA
AACACTTTGGCACTGGCTGAACAGCACCACTGTTATCAGCTAAAAACTGTTTGCCTGAGA
TTTGTGGCTTTGCCTGAGAATTTAAAAGCTGTCATGCAAACCGATGGGTTTGATTATTTG
CAGCAAAGCTGCCCATCCTTGCTGACCGAGCTTCTGGAGTATGTGGCCAAGGTAGGGGAG
CATTCGGTGAGCCCCTGCTTGTATTCGAACGAAGTCCTTGATGGTGGCGATGCCCATGGA
AGACGTGTGAAACCGCGGATTTAACGGCAGCCCTGATAAAAACCTAGCTGGATTTCCTTG
TGTTGTTTCCGTGTAAAGTGTTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATA
TCATGCATGTTGTAGTGTCTTGTGACTTCTATACCTCCCCCTATCGTTGCTACTCTGGAG
CTGAGTTGTTGCTAATATATGTGTTCTACTGACTAACANAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14523#0      AGCCAAAACCAAACTCCATCACCTCCTCCTCCGTCTCCTTCCCCCACCATTTCTCCCCCA 60
consensus_14523#1      ------------------------------------------------------------
                                                                                   

consensus_14523#0      AATCCGTCTCCTCCTCCTCCCCCACCCAAATCTCCCACCTCCGCCGTCGCGGAATCCGCC 120
consensus_14523#1      ------------------------------------------------------------
                                                                                   

consensus_14523#0      GCGACGACCTCCCCTCGATCCGCCCGATCCGACCCCGGATCGGATCCCACCGTCGCCGCC 180
consensus_14523#1      ------------------------------------------------------------
                                                                                   

consensus_14523#0      CGCGCGCGTGGTGGTTGGGTGTGCGGGGTGTGCAAACCCTAGGTCTCCGATCCGGATCCC 240
consensus_14523#1      ------------------------------------------------------------
                                                                                   

consensus_14523#0      CCCCCCACCCACCCCGCCGATGGGCGCTGGCCGGGCTTGCCGCGGCGGCCCCTCCTCCTC 300
consensus_14523#1      ------------------------------------------------------------
                                                                                   

consensus_14523#0      CTCCCCCGCCGCTGCCGCCGCTGCGGTGGGGCGGCCGTTCCCTCCGATCGCCGCTTCGTG 360
consensus_14523#1      ------------------------------------------------------------
                                                                                   

consensus_14523#0      CCCCTTCTCGTCGTCTTCGGCGGCGGCTGCGGCCCCCGCGGCGCCTTCCGAGACGGCGTC 420
consensus_14523#1      ------------------------------------------------------------
                                                                                   

consensus_14523#0      GACGTCGGTGACCAAGACCGTGAACGGGTCGCACCACTTCAAGATCGCCGGGTACCCGCT 480
consensus_14523#1      ------------------------------------------------------------
                                                                                   

consensus_14523#0      GGCCAAGGGGATCGGGGTCGGGAAATACATCGCCTCCGAGTGCTTCACCGTCGGCGGCTA 540
consensus_14523#1      ------------------------------------------------------------
                                                                                   

consensus_14523#0      CGACTGGGCGATCTACTTCTACCCCGACGGGAAGAGCCCCGAGGATGGCGCCGCCTACGT 600
consensus_14523#1      ------------------------------------------------------------
                                                                                   

consensus_14523#0      CTCGCTCTTCATAGCGCTCGCCAGCGAGGGCACCGACGTCCGCGCGCTCTTCGAGCTCAC 660
consensus_14523#1      ------------------------------------------------------------
                                                                                   

consensus_14523#0      GCTCGTCGACCAGAGCGGCAAGGGGCAGGACAAGGTGCACACCCACTTTGGGAGGTCGCT 720
consensus_14523#1      ------------------------------------------------------------
                                                                                   

consensus_14523#0      CGAGGGCGGGCCATATACCCTCAAGTACCGGGGGAGCATGTGGGGTTACAAGCGTTTCTT 780
consensus_14523#1      ------------------------------------------------------------
                                                                                   

consensus_14523#0      CAAACGGTCTGCCTTGGAAACATCAGATTATCTTAAAGATGATTGCCTTTTGGTGAATTG 840
consensus_14523#1      ------------------------------------------------------------
                                                                                   

consensus_14523#0      TACTGTTGGTGTTGTCCAATCACATACTGAAGGGCCAAAGATATATACAATACCAGTGCC 900
consensus_14523#1      ------------------------------------------------------------
                                                                                   

consensus_14523#0      ACCATCCAATATGTCTCAGCATATTGGCCAGCTACTGACGGATGGAAAGAGAACTGATAT 960
consensus_14523#1      ------------------------------------------------------------
                                                                                   

consensus_14523#0      TACATTTGAAGTTGATGGAGAGGTGTTCCCTGCTCACAAGGTTGTTCTTGCAGCCCGGTC 1020
consensus_14523#1      ------------------------------------------------------------
                                                                                   

consensus_14523#0      ACCAGTTTTCAGGGCACAGCTTTTCGGTCCAATGAAGGATAAAAACATGAAGCGTATAAC 1080
consensus_14523#1      ------------------------------------------------------------
                                                                                   

consensus_14523#0      GATTGAGGATATGGAGGCTTCAGTTTTTAAGGCCTTACTCCATTTTATGTACTGGGATGA 1140
consensus_14523#1      ------------------------------------------------------------
                                                                                   

consensus_14523#0      GTTGCCTGATATCGAAGAGCTTACTGGCCTAAATACAACTTGGGTATCCACTTTGATGGC 1200
consensus_14523#1      ------------------------------------------------------------
                                                                                   

consensus_14523#0      TCAGCATTTACTTGCAGCTGCGGATCGTTATGCATTGGAGAGACTAAAGTTGCTCTGTGA 1260
consensus_14523#1      ----------------------------------------AGACTAAAGTTGCTCTGTGA 20
                                                               ********************

consensus_14523#0      GCTCAAGCTTTGTGAAGATGTTGCAATAAACACAGTTGCAAACACTTTGGCACTGGCTGA 1320
consensus_14523#1      GCTCAAGCTTTGTGAAGATGTTGCAATAAACACAGTTGCAAACACTTTGGCACTGGCTGA 80
                       ************************************************************

consensus_14523#0      ACAGCACCACTGTTATCAGCTAAAAACTGTTTGCCTGAGATTTGTGGCTTTGCCTGAGAA 1380
consensus_14523#1      ACAGCACCACTGTTATCAGCTAAAAACTGTTTGCCTGAGATTTGTGGCTTTGCCTGAGAA 140
                       ************************************************************

consensus_14523#0      TTTAAAAGCTGTCATGCAAACCGATGGGTTTGATTATTTGCAGCAAAGCTGCCCATCCTT 1440
consensus_14523#1      TTTAAAAGCTGTCATGCAAACCGATGGGTTTGATTATTTGCAGCAAAGCTGCCCATCCTT 200
                       ************************************************************

consensus_14523#0      GCTGACCGAGCTTCTGGAGTATGTGGCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTT 1500
consensus_14523#1      GCTGACCGAGCTTCTGGAGTATGTGGCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTT 260
                       ************************************************************

consensus_14523#0      GTATTCGAACGAAGTCCTTGATGGTGGCGATGCCAATGGAAGACGTGTGAAACCGCGGAT 1560
consensus_14523#1      GTATTCGAACGAAGTCCTTGATGGTGGCGATGCCCATGGAAGACGTGTGAAACCGCGGAT 320
                       ********************************** *************************

consensus_14523#0      TTAACGGCAGCCCTGATAAAAACCTAGCTGGATTTCCTTGTGTTGTTTCCGTGTAAAGTG 1620
consensus_14523#1      TTAACGGCAGCCCTGATAAAAACCTAGCTGGATTTCCTTGTGTTGTTTCCGTGTAAAGTG 380
                       ************************************************************

consensus_14523#0      TTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATATCATGCATGTTGTAGTGTCT 1680
consensus_14523#1      TTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATATCATGCATGTTGTAGTGTCT 440
                       ************************************************************

consensus_14523#0      TGTGACTTCTATACCTCCCCCTATCGTTGCTACTCTGGAGCTGAGTTGTTGCTAATATAT 1740
consensus_14523#1      TGTGACTTCTATACCTCCCCCTATCGTTGCTACTCTGGAGCTGAGTTGTTGCTAATATAT 500
                       ************************************************************

consensus_14523#0      GTGTTCTACTGACTAGTGTACTGCAAAATTGCATTGCTGCGAAGCACATGGAGCTTCGCA 1800
consensus_14523#1      GTGTTCTACTGACTAACANAAAAAA----------------------------------- 525
                       ***************    *    *                                   

consensus_14523#0      GCCTGTGACCATAAAGTGCACTCAGGTGGCACGGCAAAGGTGGACTGGGCGCAAGGTTTT 1860
consensus_14523#1      ------------------------------------------------------------
                                                                                   

consensus_14523#0      GTCGGTGGAAATAACGGCGCAGAATGTTTCTATGGAAGTTTAACTTTGTGCTTAGGTCAG 1920
consensus_14523#1      ------------------------------------------------------------
                                                                                   

consensus_14523#0      CTTTGTCGATTTGTAGTCGTCTGTATGACTGTAATTCAATTGGAATGGTGAAATGCAATG 1980
consensus_14523#1      ------------------------------------------------------------
                                                                                   

consensus_14523#0      AAATGTATCGGTTAGATCGAGTCAAACCTTAAAAGG 2016
consensus_14523#1      ------------------------------------