These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14538#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1224 fasta sequence [CTCCTATCGTCATCCGCTCTTCTTCCCCTCTTCCCCACTCGCACCAACCCCAACCCCCCCAACCGCCGCCGCCGCCGCCGACGACCCACCGGTCGCCGCGTCGCCGGAGTCGCGTACTGGAGAGGGGGGCGGAGAGGCACCAGCCGCCCCATGGCGTTCCACTACCCGGACCACGGCCTCGCCATGGACCCGTCCTCCGCCGCGGCGTCGTCGCCCAACCCTAGCTTCTCCCCCGGAGGCGGGGGC-GGGGGCG-----G---CAATTTCAGATGACTTCTTTGCCCAGTGATTACGCCTATGATCGCAATTCCCTTGTGAATGGGCCGGTCTCCAGATTTTGTCACACCAGAGCACGAGAGAATGTACTACACTCTTCACAATAAAAGGTACTGTTTACATCTAGTTTCATGTTGAACCAATCTACCACGATTGCTCAGCACCACCATCACCTGTAACGTTTCTTTTCTTCTTGGTCTTTTCA-CCAGAGGATGCTGGGTTGCTATGCCAGTTTCGTTTGCGTTGGTTAATGAACCAATTGTTGATTTGCTTCAGTTGTAACCCCGTTTCCTGCACCAGGCGGGCCTTGTCGTCTTCAGTTGGGTATGGCCACTTAGAATGAGCTTGCCACCAAGCTTTTAGTATAGATGCAGTATCA-CCAGGAAGTTTACCAGCTCTCCGCTTGCGAAGGATCTCTTCCCTAATATCCACAAGCTTTTCTTTGTACCCCTGCTTAAGCTCGTTCTTCAGCTCATGCCGTACACGCTCAACCAAGGATCTTTCACCCTCGGTCAGCATTAAGGGACCAAAGCCCATGCCGTCTGACCCATCATTTCCATCAAACATGTTGGCTTCACTGTCCACTTGGTTATCTTCATCATCAGACATAGTCGCTCCAGTCCCTTCACCAGGAGATGCCCCTGTTAGACTTTGTAAAGACTGTTCAAGTTCCCAGCACCCCATCACTGCTTCCATTGCATGAACACGCACATGCTGCTGAAGTTGTTCCTTGAATGAGCAAAGAAGCAACACATAATGTGTCATGAAGAGGTCGAGCTCCTCGCCACCGGAGGGGCCACCGGCGGCGGCGGCGGCGGAGGCGGCTGCGAGGGGAGGCGGGCGCGCGGCGATCTGCGCGTCGATGCGGGGGAGCTGGTCCACGGGGGTGGCGACGCGGAGGCAGGCGACGTGCGCCTCGAGCAGGCGCTCGTAGAGCGGGTGCGCCGCGACGGC] [+] EMBL CB659998 [CTCCTATCGTCATCCGCTCTTCTTCCCCTCTTCCCCACTCGCACCAACCCCAACCCCCCCAACCGCCGCCGCCGCCGCCGACGACCCACCGGTCGCCGCGTCGCCGGAGTCGCGTACTGGAGAGGGGGGCGGAGAGGCACCAGCCGCCCCATGGCGTTCCACTACCCGGACCACGGCCTCGCCATGGACCCGTCCTCCGCCGCGGCGTCGTCGCCCAACCCTAGCTTCTCCCCCGGAGGCGGGGGC GGGGGCG G CAATTTCAGATGACTTCTTTGCCCAGTGATTACGCCTATGATCGCAATTCCCTTGTGAATGGGCCGGTCTCCAGATTTTGTCACACCAGAGCACGAGAGAATGTACTACACTCTTCACAATAAAAGGTACTGTTTACATCTAGTTTCATGTTGAACCAATCTACCACGATTGCTCAGCACCACCATCACCTGTAACGTTTCTTTTCTTCTTGGTCTTTTCA CCAGAGGATGCTGGGTTGCTATGCCAGTTTCGTTTGCGTTGGTTAATGAACCAATTGTTGATTTGCTTCAGTTGTAACCCCGTTTCCTGCACCAGGCGGGCCTTGTCGTCTTCAGTTGGGTATGGCCACTTAGAATGAGCTTGCCACCAAGCTTTTAGTATAGATGCAGTATCA CCAGGAAGTTTACCAGCTCTCCGCTTGCGAAGGATCTCTTCCCTAATATCCACAAGCTTTTCTTTGTACCCCTGCTTAAG ] [+] EMBL CB667101 [ AACCCCCCCAACCGCCGCCGCCGCCGCCGACGACCCACCGGTCGCCGCGTCGCCGGAGTCGCGTACTGGAGAGGGGGGCGGAGAGGCACCAGCCGCCCCATGGCGTTCCACTACCCGGACCACGGCCTCGCCATGGACCCGTCCTCCGCCGCGGCGTCGTCGCCCAACCCTAGCTTCTCCCCCGGAGGCGGGGGCGGGGGGCGCTTATGCTACAATTTCAGATGACTTCTTTGCCCAGTGATTACGCCTATGATCGCAATTCCCTTGTGAATGGGCCGGTCTCCAGATTTTGTCACACCAGAGCACGAGAGAATGTACTACACTCTTCACAATAAAAGGTACTGTTTACATCTAGTTTCATGTTGAACCAATCTACCACGATTGCTCAGCACCACCATCACCTGTAACGTTTCTTTTCTTCTTGGTCTTTTCA CCAGAGGATGCTGGGTTGCTATGCCAGTTTCGTTTGCGTTGGTTAATGAACCAATTGTTGATTTGCTTCAGTTGTAACCCCGTTTCCTGCACCAGGCGGGCCTTGTCGTCTTCAGTTGGGTATGGCCACTTAGAATGAGCTTGCCACCAAGCTTTTAGTATAGATGCAGTATCA CCAGGAAGTTTACCAGCTCTCCGCTTGCGAAGGATCTCTTCCCTAATATCCACAAGCTTTTCTTTGTACCCCTGCTTAAGCTCGTTCTTCAGCTCATGCCGTACACGCTCAACCAAGGATCTTTCACCCTCGGTCAGCATTAAGGGACC ] [-] EMBL CB657719 [ ATCACCTGTAACGTTTC TTTCTTCTTGGTC TTTCACCCAGAGGATGCTGGGTTGCTATGCCAGTTTCGTTTGCGTTGGTTAATGAACCAATTGTTGATTTGCTTCAGTTGTAACCCCGTTTCCTGCACCAGGCGGGCCTTGTCGTCTTCAGTTGGGTATGGCCACTTAGAATGAGCTTGCCACCAAGCTTTTAGTATAGATGCAGTATCA CCAGGAAGTTTACCAGCTCTCCGCTTGCGAAGGATCTCTTCCCTAATATCCACAAGCTTTTCTTTGTACCCCTGCTTAAGCTCGTTCTTCAGCTCATGCCGTACACGCTCAACCAAGGATCTTTCACCCTCGGTCAGCATTAAGGGACCAAAGCCCATGCCGTCTGACCCATCATTTCCATCAAACATGTTGGCTTCACTGTCCACTTGGTTATCTTCATCATCAGACATAGTCGCTCCAGTCCCTTCACCAGGAGATGCCCCTGTTAGACTTTGTAAAGACTGTTCAAGTTCCCAGCACCCCATCACTGCTTCCATTGCATGAACACGCACATGCTGCTGAAGTTGTTCCTTGAATGAGCAAAGAAGCAACACATAATGTGTCATGAAGAGGTCGAGCTCCTCGCCACCGGAGGGGCCACCGGCGGCGGCGGCGGCGGAGGCGGCTGCGAGGGGAGGCGGGCGCGCGGCGATCTGCGCGTCGATGCGGGGGAGCTGGTCCACGGGGGTGGCGACGCGGAGGCAGGCGACGTGCGCCTCGAGCAGGCGCTCGTAGAGCGGGTGCGCCGCGACGGC] [-] EMBL C28225 [ GGCCACTTAGAATGAGCTTGCCACCAAGCTTTNAGTATAGATGCAGTATCACCCAGGAAGTTTACCAGCTCTCCGCTTGCGAAGGATCTCTTCCCTAATATCCACAAGCTTTTCTTTGTACCCCTGCTTAAGCTCGTTCTTCAGCTCATGCCGTACACGCTCAACCAAGGATCTTTCACCCTCGGTCAGCATTAAGGGACCAAAGCCCATGCCGTCTGACCCATTATTTCCATCAAACATGTTGGCTTCACTGTCCACTTGGTTATCTTCATCATCAGACATAGTCGCTCCAGTCCCTTCACCAGGAGATGCCCCTGTTAGACTTTGTAAAGACTGTTCAAGTTCCCAGCACCCCATNACTGCTTCCATTGCATGAACACGCACATGCTGCTGAAGTTGTTCCTTGAATGAGCAAAGAAGCAACA ] consensusID : consensus_14538#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1148 fasta sequence [TCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAACCCCTTACGCACATATACTCCGTTTTTTTATACACA-GTGAATTACCAAAACATGTTACACCTCAACACTGCATCGTGCATCAAAACAGAGAACATATCCAATCC-GAATCTTAAA-GCTCCTAATATCATATATATATTACATGATAAATAAGATACACAATTACATACACAATACAATTCTTCCTTCC-GTTCATC-G-GTTATACA-GAACATTCCTTCACAA-AATCACATTAGCAGACAGTC-GATGCTATACTGCGAAA-GTCAAATACCACCCACCTCAGTTTTGTGCGCTTATGCTACAATTTCAGATGACTTCTTTGCCCAGTGATTACGCCTATGATCGCAATTCCCT-TGTGAATGGGCCGGTCTCCAGATTTTGTCACACCAGAGCACGAGAGAATGTACTACACTCTTCACAATAAAAGGTACTGTTTACATCTAGTTTCATGTTGAACCAATCTACCACGATTGCTCAGCACCACCATCACCTGTAACGTTTCTTTTCTTCTTGGTCTTTTCACCAGAGGATGCTGGGTTGCTATGCCAGTTTCGTTTGCGTTGGTTAATGAACCAATTGTTGATTTGCTTCAGTTGTAACCCCGTTTCCTGCACCAGGCGGGCCTTGTCGTCTTCAGTTGGGTATGGCCACTT-AGAATGAGCTTGCCACCAAGCTTTTAGTATAGATGCAGTATCACCAGGAAGTTTACCAGCTCTCCGCTTGCGAAGGATCTCTTCCCTAATATCCACAAGCTTTTCTTTGTACCCCT-GCTT-AAGCTCGTTCTTCAGCTCATGCCGTACACGCTCAACCAAGGATCTTTCACCCTC-GGTCAGCATTAAGGGACCAAAGCCCATGCCGTCTGACCCATCATTTCCATCAAACATGTTGGCTTCACTGTCCACTTGGTTATCTTCATCATCAGACATAGTCGCTCCAGTCCCTTCACCAGGAGATGCCCCTGTTAGACTTTGTAAAGACTGTTCAAGTTCCCAGCACCCCATCACTGCTTCCATTGCATGAACACGCACATGCTGCTGAAGTTGTTCCTTGAATGAGCAAAGAAGCAACACATAATGTGTCTGCAATTAAGAGAAGTATGTTAGAGTCCACAAG] [+] EMBL CB653718 [TCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAACCCCTTACGCACATATACTCCGATATTTTATACACA GGGAATTACCAAAACATGTTACACCTCAACACTGCATCGGGCATCAAAACAGAAAACATATCCAATCC GAATCTTAAA GCTCCTAATATCATATATATATTACATGATAAATAAAATACACAATTACATACACAATACAATTCTTCCTTCC GTTCATC G GTTATACA AAACATTCCTTCACAA AATCACATTAACAAACAGTC GATGCTATACTGCGAAA GTCAAATACCACCCACCTCAGTTTTGGGCGCTTATGCTACAATTTCAAATGACTTCTTTGCCCAGTGATTACCCCTATGATCGCAATTCCCT TGGGAATGGGCCGGTCTCCAAATTTTGTCCCACCAGAGCACGAAAGAATGTACTACCCTCTTCACAATAAAAGGGACTGTTTACATCTAGTTTCATGTTGAACCAATCTACCACGATTGCTCAGCACCACCATCACCTGTAACGTTTCTTTTCTTCTTGGTCTTTTCACCAAAGGATGCTGGGTTGCTATGCCAGTTTCGTTTGCGTTGGTTAATGAACCAATTGTTGATTTGCTTCAGTTGTAACCCCGTTTCCTGCACCAGGCGGGCCTTGTCGTCTTCAGTTGGGTATGGCCACTT AGAATGAGCTTGCCACCAAG ] [+] EMBL CB660001 [ TACTCCGATATTTTATACACA GTGAATTACCCCAACATGTTACACCTCAACACTGCATCGTGCATCAAAACAGAGAACATATCCAATCC GAATCTTAAA GCTCCTAATATCATATATATATTACATGATAAATAAGATACACAATTACATACACAATACAATTCTTCCTTCC GTTCATC G GTTATACA GAACATTCCTTCACAA AATCACATTAGCAGACAGTC GATGCTATACTGCGAAA GTCAAATACCACCCACCTCAGTTTTGTGCGCTTATGCTACAATTTCAGATGACTTCTTTGCCCAGTGATTACGCCTATGATCGCAATTCCCT TGTGAATGGGCCGGTCTCCAGATTTTGTCACACCAGAGCACGAGAGAATGTACTACACTCTTCACAATAAAAGGTACTGTTTACATCTAGTTTCATGTTGAACCAATCTACCACGATTGCTCAGCACCACCATCACCTGTAACGTTTCTTTTCTTCTTGGTCTTTTCACCAGAGGATGCTGGGTTGCTATGCCAGTTTCGTTTGCGTTGGTTAATGAACCAATTGTTGATTTGCTTCAGTTGTAACCCCGTTTCCTGCACCAGGCGGGCCTTGTCGTCTTCAGTTGGGTATGGCCACTT AGAATGAGCTTGCCACCAAGCTTTTAGTATAGATGCAGTATCACCAGGAAGTTTACCAGCTCTCCGCTTGCGAAGGATCTCTTCCCTAATATCCACAAGCTTTTCTTTGTACCCCT GCTT AAGCTCGTTCTTCAGCTCATGCCGTACACGCTCAACCAAGGATCTTTCACCCTC GGTCAGCATTAAGGGACCAAAGCCCATGCCGTC ] [-] EMBL AB007627 [ tTTTTTTTATACACA GTGAATTACCAAAACATGTTACACCTCAACACTGCATCGTGCATCAAAACAGAGAACATATCCAATCC GAATCTTAAA GCTCCTAATATCATATATATATTACATGATAAATAAGATACACAATTACATACACAATACAATTCTTCCTTCC GTTCATC G GTTATACA GAACATTCCTTCACAA AATCACATTAGCAGACAGTC GATGCTATACTGCGAAA GTCAAATACCACCCACCTCAGTTTTGTGCGCTTATGCTACAATTTCAGATGACTTCTTTGCCCAGTGATTACGCCTATGATCGCAATTCCCT TGTGAATGGGCCGGTCTCCAGATTTTGTCACACCAGAGCACGAGAGAATGTACTACACTCTTCACAATAAAAGGTACTGTTTACATCTAGTTTCATGTTGAACCAATCTACCACGATTGCTCAGCACCACCATCACCTGTAACGTTTCTTTTCTTCTTGGTCTTTTCACCAGAGGATGCTGGGTTGCTATGCCAGTTTCGTTTGCGTTGGTTAATGAACCAATTGTTGATTTGCTTCAGTTGTAACCCCGTTTCCTGCACCAGGCGGGCCTTGTCGTCTTCAGTTGGGTATGGCCACTT AGAATGAGCTTGCCACCAAGCTTTTAGTATAGATGCAGTATCACCAGGAAGTTTACCAGCTCTCCGCTTGCGAAGGATCTCTTCCCTAATATCCACAAGCTTTTCTTTGTACCCCT GCTT AAGCTCGTTCTTCAGCTCATGCCGTACACGCTCAACCAAGGATCTTTCACCCTC GGTCAGCATTAAGGGACCAAAGCCCATGCCGTCTGACCCATCATTTCCATCAAACATGTTGGCTTCACTGTCCACTTGGTTATCTTCATCATCAGACATAGTCGCTCCAGTCCCTTCACCAGGAGATGCCCCTGTTAGACTTTGTAAAGACTGTTCAAGTTCCCAGCACCCCATCACTGCTTCCATTGCATGAACACGCACATGCTGCTGAAGTTGTTCCTTGAATGAGCAAAGAAGCAACACATAATGTGTCTGCAATTAAGAGAAGTATGTTAGAGTCCACAAG] [-] EMBL AB061817 [ tTTTTTTTATACACA GTGAATTACCAAAACATGTTACACCTCAACACTGCATCGTGCATCAAAACAGAGAACATATCCAATCC GAATCTTAAA GCTCCTAATATCATATATATATTACATGATAAATAAGATACACAATTACATACACAATACAATTCTTCCTTCC GTTCATC G GTTATACA GAACATTCCTTCACAA AATCACATTAGCAGACAGTC GATGCTATACTGCGAAA GTCAAATACCACCCACCTCAGTTTTGTGCGCTTATGCTACAATTTCAGATGACTTCTTTGCCCAGTGATTACGCCTATGATCGCAATTCCCT TGTGAATGGGCCGGTCTCCAGATTTTGTCACACCAGAGCACGAGAGAATGTACTACACTCTTCACAATAAAAGGTACTGTTTACATCTAGTTTCATGTTGAACCAATCTACCACGATTGCTCAGCACCACCATCACCTGTAACGTTTCTTTTCTTCTTGGTCTTTTCACCAGAGGATGCTGGGTTGCTATGCCAGTTTCGTTTGCGTTGGTTAATGAACCAATTGTTGATTTGCTTCAGTTGTAACCCCGTTTCCTGCACCAGGCGGGCCTTGTCGTCTTCAGTTGGGTATGGCCACTT AGAATGAGCTTGCCACCAAGCTTTTAGTATAGATGCAGTATCACCAGGAAGTTTACCAGCTCTCCGCTTGCGAAGGATCTCTTCCCTAATATCCACAAGCTTTTCTTTGTACCCCT GCTT AAGCTCGTTCTTCAGCTCATGCCGTACACGCTCAACCAAGGATCTTTCACCCTC GGTCAGCATTAAGGGACCAAAGCCCATGCCGTCTGACCCATCATTTCCATCAAACATGTTGGCTTCACTGTCCACTTGGTTATCTTCATCATCAGACATAGTCGCTCCAGTCCCTTCACCAGGAGATGCCCCTGTTAGACTTTGTAAAGACTGTTCAAGTTCCCAGCACCCCATCACTGCTTCCATTGCATGAACACGCACATGCTGCTGAAGTTGTTCCTTGAATGAGCAAAGAAGCAACACATAATGTGTC ATGAAGAGgtcga ] [-] EMBL BI810936 [ TTTTTTTATACACATGTGAATTACCAAAACATGTTACATCTCAACACTGCATCGTGCATCAAAACAGAGAACATATCCAATCCTGAATCTTAAATGCTCCTAATATCATATATATATTACATGATAAATAAGATACACAATTACATACACAATACAATTCTTCCTTCCTGTTCATCTGTGTTATACATGAACATTCCTTCACAACAATCACATTAGCAGACAGTCTGATGCTATACTGCGAAATGTCAAAT ] [+] EMBL CB645698 [ TTTTATACACC TTTAATTACCAAAACATGTTACACCTCAACACTGCATCGTGCATCAAAACAGAGAACATATCCAATCC GAATCTTAAA GCTCCTAATATCATATATATATTACATGATAAATAAGATACACAATTACATACACAATACAATTCTTCCTTCC GTTCATC G GTTATACA GAACATTCCTTCACAA AATCACATTAGCAGACAGTC GATGCTATACTGCGAAA GTCAAATACCACCCACCTCAGTTTTGTGCGCTTATGCTACAATTTCAGATGACTTCTTTGCCCAGTGATTACGCCTATGATCGCAATTCCCT TGTGAATGGGCCGGTCTCCAGATTTTGTCACACCAGAGCACGAGAGAATGTACTACACTCTTCACAATAAAAGGTACTGTTTACATCTAGTTTCATGTTGAACCAATCTACCACGATTGCTCAGCACCACCATCACCTGTAACGTTTCTTTTCTTCTTGGTCTTTTCACCAGAGGATGCTGGGTTGCTATGCCAGTTTCGTTTGCGTTGGTTAATGAACCAATTGTTGATTTGCTTCAGTTGTAACCCCGTTTCCTGCACCAGGCGGGCCTTGTCGTCTTCAGTTGGGTATGGCCACTT AGAATGAGCTTGCCACCAAGCTTTTAGTATAGATGCAGTATCACCAGGAAGTTTACCAGCTCTCCGCTTGCGAAGGATCTCTTCCCTAATATCCACAAGCTTTTCTTTGTACCCCT GCTT AAGCTCGTTCTTCAGCTCATGCCGTACACGCTC ] [+] EMBL CB657720 [ ATACACAGGTGAATTACCAAAACATGTTACACCCCCACACTGCATCGTGCATCAAAACAGAGAACATATCCAATCC GAATCTTAAA GCTCCTAATATCATATATATATTACATGATAAATAAGATACACAATTACATACACAATACAATTCTTCCTTCC GTTCATC G GTTATACA GAACATTCCTTCACAA AATCACATTAGCAGACAGTC GATGCTATACTGCGAAA GTCAAATACCACCCACCTCAGTTTTGTGCGCTTATGCTACAATTTCAGATGACTTCTTTGCCCAGTGATTACGCCTATGATCGCAATTCCCT TGTGAATGGGCCGGTCTCCAGATTTTGTCACACCAGAGCACGAGAGAATGTACTACACTCTTCACAATAAAAGGTACTGTTTACATCTAGTTTCATGTTGAACCAATCTACCACGATTGCTCAGCACCACCATCACCTGTAACGTTTCTTTTCTTCTTGGTCTTTTCACCAGAGGATGCTGGGTTGCTATGCCAGTTTCGTTTGCGTTGGTTAATGAACCAATTGTTGATTTGCTTCAGTTGTAACCCCGTTTCCTGCACCAGGCGGGCCTTGTCGTCTTCAGTTGGGTATGGCCACTT AGAATGAGCTTGCCACCAAGCTTTTAGTATAGATGCAGTATCACCAGGAAGTTTACCAGCTCTCCGCTTGCGAAGGATCTCTTCCCTAATATCCACAAGCTTTTCTTTGTACCCCT GCTT AAGCTCGTTCTTCAGCTCATGCCGTACACGCTCAACCAAGGATCTTTCACCCTC GGTCAGCATTAAGGGA CAAAGCCCATGCCGTCTGACC ] [-] EMBL AU166485 [ tttttTTACCAAAACATGTTACACCTCAACACTGCATCGTGCATCAAAACAGAGAACATATCCAATCC GAATCTTAAA GCTCCTAATATCATATATATATTACATGATAAATAAGATACACAATTACATACACAATACAATTCTTCCTTCC GTTCATC G GTTATACA GAACATTCCTTCACAA AATCACATTAGCAGACAGTC GATGCTATACTGCGAAA GTCAAATACCACCCACCTCAGTTTTGTGCGCTTATGCTACAATTTCAGATGACTTCTTTGCCCAGTGATTACGCCTATGATCGCAATTCCCT TGTGAATGGGCCGGTCTCCAGATTTTGTCACACCAGAGCACGAGAGAATGTACTACACTCTTCACAATAAAAGGTACTGNTTACATCTAGTTTCATGTTGAACCAATCTACCACGATTGCTCAGCACCACCA ] [+] EMBL CB667102 [ CACCTCAACACTGCATCGTGCATCAAAACAGAGAACATATCCAATCC GAATCTTAAA GCTCCTAATATCATATATATATTACATGATAAATAAGATACACAATTACATACACAATACAATTCTTCCTTCC GTTCATC G GTTATACA GAACATTCCTTCACAA AATCACATTAGCAGACAGTC GATGCTATACTGCGAAA GTCAAATACCACCCACCTCAGTTTTGTGCGCTTATGCTACAATTTCAGATGACTTCTTTGCCCAGTGATTACGCCTATGATCGCAATTCCCT TGTGAATGGGCCGGTCTCCAGATTTTGTCACACCAGAGCACGAGAGAATGTACTACACTCTTCACAATAAAAGGTACTGTTTACATCTAGTTTCATGTTGAACCAATCTACCACGATTGCTCAGCACCACCATCACCTGTAACGTTTCTTTTCTTCTTGGTCTTTTCACCAGAGGATGCTGGGTTGCTATGCCAGTTTCGTTTGCGTTGGTTAATGAACCAATTGTTGATTTGCTTCAGTTGTAACCCCGTTTCCTGCACCAGGCGGGCCTTGTCGTCTTCAGTTGGGTATGGCCACTT AGAATGAGCTTGCCACCAAGCTTTTAGTATAGATGCAGTATCACCAGGAAGTTTACCAGCTCTCCGCTTGCGAAGGATCTCTTCCCTAATATCCACAAGCTTTTCTTTGTACCCCT GCTT AAGCTCGTTCTTCAGCTCATGCCGTACACGCTCAACCAAGGATCTTTCACCCTC GGTCAGCATTAAGGGACCAAAGCCCATGCCGTCTGACCCATCATTTCCATCAAACATGTTGGCTTCACTGTCCACTTGGTTA ] [-] EMBL BI807149 [ ATCC GAATCTTAAA GCTCCTAATATCATATATATATTACATGATAAATAAGATACACAATTACATACACAATACAATTCTTCCTTCC GTTCATC G GTTATACA GAACATTCCTTCACAA AATCACATTAGCAGACAGTC GATGCTATACNGGGAAA GTCAAATACCACCCACCTCAGTTTGGGGCGCTTATGCTACAATTTCAGATGACTTCTTGGCCCAGTGATTACGCCTATGATCGCAATTCCCTGGGTGAATGGGCCGGTCTCCAGATTTGGTCACACCAGAGCACGAGAGAATGTACTACACTCTTCACAATAAAAGGTACTGTTTACATCTAGTTTCATGTTGAACCAATCTACCACGATGGNTCAGCACCACCATCACCTGTAACGTTTCTTTTCTTCTGGGTCTTTTCACCAGAGGATGCTGGGTGGCTATGCCAGTTTCG TGGCG TGGTTAATGAACCAATGGTGGATTTGGTTCAGTTGTAACCCCGTTTCCTG ACCAGG GGGGCTTGTCGTCTTCAG TGGGTATGGCCACTTAAGAATGAG TTGGCA ] [-] EMBL C97565 [ tttt tttttTTAAA GCTCCTAATATCATATATATATTACATGATAAATAAGATACACAATTACATACACAATACAATTCTTCCTTCC GTTCATC G GTTATACA GAACATTCCTTCACAA AATCACATTAGCAGACAGTC GATGCTATACTGCGAAA GTCAAATACCACCCACCTCAGTTTTGTGCGCTTATGCTACAATTTCAGATGACTTCTTTGCCCAGTGATTACGCCTATGATCGCAATTCCCT TGTGAATGGGCCGGTCTCCAGATTTTGTCACACCAGAGCACGAGAGAATGTACTACACTCTTCACAATAAAAGGTACTGTTTACATCTAGTTTCATGTTGAACCAATCTACCACGATTGCTCAGCACCACCATCACCTGTAACGTTTCTTTTCTTCTTGGTCTTTTCACCAGAGGATGCTGGGTTGCTATGCCAGTTTCGTTTGCGTTGGTTAATGAACCAATTGTTGATTTGCTTCAGTTGTAACCCCGTTTCCTGCACCAGGCGGGCCTTGTCGTCTTCAGTTGGGTATGGCCACTT AGAATGAGCTTGCCACCAAGCTTTTAGTATAGATGCAGTATCACCAGGAAGTTTACCAGCTCTCCGCTTGCGAANGATCTCTTCCCTAATATCCACAAGCTTTTCCTTGTANCCCTGGCTTAAAGCTCGTTCTTCAGCTCATGCCGTA AAGGTCAACCAAGG TCTTTCAACCTCNGGTCAGCATTAANGGACCAAAGCCCATGCCGTCTGANCCATCAATTCCAacna ] [+] EMBL CB645697 [ tattACCCACCTCAGTTTTGTGCGCTTATGCTACAATTTCAGATGACTTCTTTGCCCAGTGATTACGCCTATGATCGCAATTCCCT TGTGAATGGGCCGGTCTCCAGATTTTGTCACACCAGAGCACGAGAGAATGTACTACACTCTTCACAATAAAAGGTACTGTTTACATCTAGTTTCATGTTGAACCAATCTACCACGATTGCTCAGCACCACCATCACCTGTAACGTTTCTTTTCTTCTTGGTCTTTTCACCAGAGGATGCTGGGTTGCTATGCCAGTTTCGTTTGCGTTGGTTAATGAACCAATTGTTGATTTGCTTCAGTTGTAACCCCGTTTCCTGCACCAGGCGGGCCTTGTCGTCTTCAGTTGGGTATGGCCACTT AGAATGAGCTTGCCACCAAGCTTTTAGT ] consensusID : consensus_14538#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 261 fasta sequence [TCATCCGCTCTTCTTCCCCTCTTCCCCACTCGCACCAACCCCAACCCCCCCAACCGCCGCCGCCGCCGCCGACGACCCACCGGTCGCCGCGTCGCCGGAGTCGCGTACCGGAGAGGGGGGCGGAGAGGCACCAGCCGCCCCATGGCGTTCCACTACCCGGACCACGGCCTCGCCATGGACCCGTCCTCCGCCGCGGCGTCGTCGCCCAACCCTAGCTTCTCCCCCGGAGGCGGGGGCGGGGCCGGGGTCGGGGGAGGGGAG] [+] EMBL CF569139 [TCATCCGCTCTTCTTCCCCTCTTCCCCACTCGCACCAACCCCAACCCCCCCAACCGCCGCCGCCGCCGCCGACGACCCACCGGTCGCCGCGTCGCCGGAGTCGCGTACCGGAGAGGGGGGCGGAGAGGCACCAGCCGCCCCATGGCGTTCCACTACCCGGACCACGGCCTCGCCATGGACCCGTCCTCCGCCGCGGCGTCGTCGCCCAACCCTAGCTTCTCCCCCGGAGGCGGGGGCGGGGCCGGGGTCGGGGGAGGGGAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14538#0 ------------------------------------------------------------ consensus_14538#2 ------------------------------------------------------------ consensus_14538#1 TCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAACCCCTTACGCACATATACT 60 consensus_14538#0 ------------------------------------------------------------ consensus_14538#2 ------------------------------------------------------------ consensus_14538#1 CCGTTTTTTTATACACAGTGAATTACCAAAACATGTTACACCTCAACACTGCATCGTGCA 120 consensus_14538#0 ------------------------------------------------------------ consensus_14538#2 ------------------------------------------------------------ consensus_14538#1 TCAAAACAGAGAACATATCCAATCCGAATCTTAAAGCTCCTAATATCATATATATATTAC 180 consensus_14538#0 ------------------------------------------------------------ consensus_14538#2 ------------------------------------------------------------ consensus_14538#1 ATGATAAATAAGATACACAATTACATACACAATACAATTCTTCCTTCCGTTCATCGGTTA 240 consensus_14538#0 ------------------------------------------------------------ consensus_14538#2 ------------------------------------------------------------ consensus_14538#1 TACAGAACATTCCTTCACAAAATCACATTAGCAGACAGTCGATGCTATACTGCGAAAGTC 300 consensus_14538#0 ------------------------------------------------------------ consensus_14538#2 ------------------------------------------------------------ consensus_14538#1 AAATACCACCCACCTCAGTTTTGTGCGCTTATGCTACAATTTCAGATGACTTCTTTGCCC 360 consensus_14538#0 ------------------------------------------------------------ consensus_14538#2 ------------------------------------------------------------ consensus_14538#1 AGTGATTACGCCTATGATCGCAATTCCCTTGTGAATGGGCCGGTCTCCAGATTTTGTCAC 420 consensus_14538#0 ------------------------------------------------------------ consensus_14538#2 ------------------------------------------------------------ consensus_14538#1 ACCAGAGCACGAGAGAATGTACTACACTCTTCACAATAAAAGGTACTGTTTACATCTAGT 480 consensus_14538#0 ------------------------------------------------------------ consensus_14538#2 ------------------------------------------------------------ consensus_14538#1 TTCATGTTGAACCAATCTACCACGATTGCTCAGCACCACCATCACCTGTAACGTTTCTTT 540 consensus_14538#0 ------------------------------------------------------------ consensus_14538#2 ------------------------------------------------------------ consensus_14538#1 TCTTCTTGGTCTTTTCACCAGAGGATGCTGGGTTGCTATGCCAGTTTCGTTTGCGTTGGT 600 consensus_14538#0 ------CTCCTATCGTCATCCGCTCTTCTT----CCCCTCTTCCCCACTCGCACCAACCC 50 consensus_14538#2 ---------------TCATCCGCTCTTCTT----CCCCTCTTCCCCACTCGCACCAACCC 41 consensus_14538#1 TAATGAACCAATTGTTGATTTGCTTCAGTTGTAACCCCGTTTCCTGCACCAGGCGGGCCT 660 * ** *** ** **** **** * * ** consensus_14538#0 CAACCCCCCCAACCGCCGCCGCCGCCGCCGACGACCCACCGGTCGCCGCGTCGCCGGAGT 110 consensus_14538#2 CAACCCCCCCAACCGCCGCCGCCGCCGCCGACGACCCACCGGTCGCCGCGTCGCCGGAGT 101 consensus_14538#1 TGTCGTCTTCAGTTG--GGTATGGCCACTTAGAATGAGCTTGCCACCAAGCTTTTAGTAT 718 * * ** * * *** * * * * * * ** * * * consensus_14538#0 CGCGTACTGGAGAGGGGGGCGGAGAGGCACCAGCCGCCCCATGGCGTTCCACTACCCGGA 170 consensus_14538#2 CGCGTACCGGAGAGGGGGGCGGAGAGGCACCAGCCGCCCCATGGCGTTCCACTACCCGGA 161 consensus_14538#1 AG-ATGCAGTATCACCAGGAAGTTTACCAGCTCTCCGCTTGCGAAGGATCTCTTCCCTAA 777 * * * * * ** * ** * * * * * * ** *** * consensus_14538#0 ---CCACG-GCCTCGCCATGGACCCGTCCTCCGCCGCGGCGTCGTCGCCCAACCCTAGCT 226 consensus_14538#2 ---CCACG-GCCTCGCCATGGACCCGTCCTCCGCCGCGGCGTCGTCGCCCAACCCTAGCT 217 consensus_14538#1 TATCCACAAGCTTTTCTTTGTACCCCTGCTTAAGCTCGTTCTTCAGCTCATGCCGTACAC 837 **** ** * * ** **** * ** * ** * * ** ** consensus_14538#0 TCTCCCCCGGAGGCGG---GGGCGGGGGCGGCAATTTCAGATGACTTCTTTGCCCAGTGA 283 consensus_14538#2 TCTCCCCCGGAGGCGG---GGGCGGGGCCGGGGTCGGGGGAGGGGAG------------- 261 consensus_14538#1 GCTCAACCAAGGATCTTTCACCCTCGGTCAGCATTAAGGGACCAAAGCCCATGCCGTCTG 897 *** ** * * ** * * ** consensus_14538#0 TTACGCCTATGATCGCAATTCCCTTGTGAATGGGCCGGTCTCCAGATTTTGTCACACCAG 343 consensus_14538#2 ------------------------------------------------------------ consensus_14538#1 ACCCATCATTTCCATCAAACATGTTGGCTTCACTGTCCACTTGGTTATCTTCATCATCAG 957 consensus_14538#0 AGCACGAGAGAATGTACTACACTCTTCACAATAAAAGGTACTGTTTACATCTAGTTTCAT 403 consensus_14538#2 ------------------------------------------------------------ consensus_14538#1 ACATAGTCGCTCCAGTCCCTTCACCAGGAGATGCCCCTGTTAGACTTTGTAAAGACTGTT 1017 consensus_14538#0 GTTGAACCAATCTACCACGATTGCTCAGCACCACCATCACCTGTAACGTTTCTTTTCTTC 463 consensus_14538#2 ------------------------------------------------------------ consensus_14538#1 CAAGTTCCCAGCACCCCATCACTGCTTCCATTGCATGAACACGCACATGCTGCTGAAGTT 1077 consensus_14538#0 TTGGTCTTTTCACCAGAGGATGCTGGGTTGCTATGCCAGTTTCGTTTGCGTTGGTTAATG 523 consensus_14538#2 ------------------------------------------------------------ consensus_14538#1 GTTCCTTGAATGAGCAAAGAAGCAACACATAATGTGTCTGCAATTAAGAGAAGTATGTTA 1137 consensus_14538#0 AACCAATTGTTGATTTGCTTCAGTTGTAACCCCGTTTCCTGCACCAGGCGGGCCTTGTCG 583 consensus_14538#2 ------------------------------------------------------------ consensus_14538#1 GAGTCCACAAG------------------------------------------------- 1148 consensus_14538#0 TCTTCAGTTGGGTATGGCCACTTAGAATGAGCTTGCCACCAAGCTTTTAGTATAGATGCA 643 consensus_14538#2 ------------------------------------------------------------ consensus_14538#1 ------------------------------------------------------------ consensus_14538#0 GTATCACCAGGAAGTTTACCAGCTCTCCGCTTGCGAAGGATCTCTTCCCTAATATCCACA 703 consensus_14538#2 ------------------------------------------------------------ consensus_14538#1 ------------------------------------------------------------ consensus_14538#0 AGCTTTTCTTTGTACCCCTGCTTAAGCTCGTTCTTCAGCTCATGCCGTACACGCTCAACC 763 consensus_14538#2 ------------------------------------------------------------ consensus_14538#1 ------------------------------------------------------------ consensus_14538#0 AAGGATCTTTCACCCTCGGTCAGCATTAAGGGACCAAAGCCCATGCCGTCTGACCCATCA 823 consensus_14538#2 ------------------------------------------------------------ consensus_14538#1 ------------------------------------------------------------ consensus_14538#0 TTTCCATCAAACATGTTGGCTTCACTGTCCACTTGGTTATCTTCATCATCAGACATAGTC 883 consensus_14538#2 ------------------------------------------------------------ consensus_14538#1 ------------------------------------------------------------ consensus_14538#0 GCTCCAGTCCCTTCACCAGGAGATGCCCCTGTTAGACTTTGTAAAGACTGTTCAAGTTCC 943 consensus_14538#2 ------------------------------------------------------------ consensus_14538#1 ------------------------------------------------------------ consensus_14538#0 CAGCACCCCATCACTGCTTCCATTGCATGAACACGCACATGCTGCTGAAGTTGTTCCTTG 1003 consensus_14538#2 ------------------------------------------------------------ consensus_14538#1 ------------------------------------------------------------ consensus_14538#0 AATGAGCAAAGAAGCAACACATAATGTGTCATGAAGAGGTCGAGCTCCTCGCCACCGGAG 1063 consensus_14538#2 ------------------------------------------------------------ consensus_14538#1 ------------------------------------------------------------ consensus_14538#0 GGGCCACCGGCGGCGGCGGCGGCGGAGGCGGCTGCGAGGGGAGGCGGGCGCGCGGCGATC 1123 consensus_14538#2 ------------------------------------------------------------ consensus_14538#1 ------------------------------------------------------------ consensus_14538#0 TGCGCGTCGATGCGGGGGAGCTGGTCCACGGGGGTGGCGACGCGGAGGCAGGCGACGTGC 1183 consensus_14538#2 ------------------------------------------------------------ consensus_14538#1 ------------------------------------------------------------ consensus_14538#0 GCCTCGAGCAGGCGCTCGTAGAGCGGGTGCGCCGCGACGGC 1224 consensus_14538#2 ----------------------------------------- consensus_14538#1 ----------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||