These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14550#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1180 fasta sequence [GTACGCAGCAAAACACAATCC-AAAGCGTGTTCATCCAATCATTCTCTGTTCCGCTCTCTCACCCCAGCGAGATGGCCGGATCAGGAGACGAGCTGATGCTGCTCGGC-AAATGGCCAA-GCCCATTCGTCACCAGGGTTGAGCTCGCGCTCGGCCTCAAGGGCCTCAGCTACGAGTACGTCAAGCAGGACCTCGTCAACAAGAGCGAGCTCCTCCTCGCCTCCAACCCGGTGCACAAGAAGATCCCCGTGCTCATCCACAACGGCAAGCCGGTCTGCGAGTCGTCAATCATCGTGCAGTACATCGACGAGGCC--TTCCCC-G-ACG-CCGGCGCC-GGCGCCGCCCTGC-TCCCCGCCGACCCCTACG-AGC-GCGCCGTCGCTCGC-TTC-T-GGGTCGCCTACGTCGACGACAAGTTCGTTCCGGCATGGG-TGG-CGACGTTC-AGAGGCAAGACGGAGGAGGAGAAGGCGGAGGGGATGAAGCAACTGCTCGCGGCGGTGGAGACGCTGGAGGGAGCCCTGAAGGATTGCTCCAAGGGGAAGCCCTTCTTCGGCGGCGACACAGTCGGGATCGTGGACGTCGCGCTTGGTGGCCTCATCTCGTGGGTGAAAGCGACCGAGGTGCTCGCTGGCTCCAAGATCTTCGACGAGGAGAAGGCCCCTCTTTTGGCCGCGTGGGCGCAGCGCTTCGGCGAGCTCGACGTCGCCGAGAAGGTGTTGCCGGATGTCGACGGGGTGGTCGAGTTCGCTAAGATGAGGCTGGCAGAGGCAGCTGCGGCTGCCGCGGCGGCTTCAAAAAACTAAGATGGATATGTTTGGTTATGTCGTGGTAACTCCCATTGTTTGGGAGAAAATAATGTGCTTGTTGGAAAAATTATTTGGGAGAAACTAATGTGCTTGTTGGAAAAGAATAGATTTAGTTGATTTAGTGTTTTTTCTGTATCAGTATCTTGATTTATGTCTGAATAATGCAAGGAATATTCAATGAAGTCATGAAAAAAAAAAAGTTTATTCAGTAGTTAGGGGATCTTTTTCTTCTGTTGGTGTCTATTAGTTTGTGTTTGCTTAGCTTTATTTATACTATCGTGAACTTTCTATATAAGTTTTTTTCTATGTGAGTTTTAAAATAATTGATTATAACTTTTTAAGTAAAGGCCGGAATGTTTTATTCTATTATTAAAAAAAAAAAAAAA] [+] EMBL AY271619 [GTACGCAGCAAAACACAATCCAAAAACGTGTTCATCCAATCATTCTCTCTTCCGCTCTCTCACCCCAGCGAGATGGCCGGATCAGGAGACGAGCTGATGCTGCTCGGC AAATGGCCGA GCCCATTCGTCACCAGGGTTGAGCTCGCGCTCGGCCTCAAGGGCCTCAGCTACGAGTACGTCAAGCAGGACCTCGTCAACAAGAGCGAGCTCCTCCTCGCCTCCAACCCGGTGCACAAGAAGATCCCCGTGCTCATCCACAACGGCAAGCCGGTCTGCGAGTCGTCGATCATCGTGCAGTACATTGACGAGGCC TTCCCC G ACG CCGGCGCC AGCGCCGCCCTGC TCCCCGCCGACCCCTACG AGC GCGCCGTCGCTCGC TTC T GGGTCGCCTACGTCGACGACAAGTTCGTTCCGGCATGGG TGG CGACTTTC AGAGGCAAGACGGAGGAGGAGAAGGCGGAGGGGATGAAGCAACTGCTCGCGGCGGTGGAGACGCTGGAGGGAGCCCTGAAGGATTGCTCCAAGGGGAAGCCCTTCTTCGGCGGCGACACAGTCGGGATCGTGGACGTCGCGCTTGGTGGCCTCATCTCGTGGGTGAAAGCGACCGAGGTGCTCGCTGGCTCCAAGATCTTCGACGAGGAGAAGGCCCCTCTTTTGGCCGCGTGGGCGCAGCGCTTCGGCGAGCTCGACGTCGCCGAGAAGGTGTTGCCGGATGTCGACGGGGTGGTCGAGTTCGCTAAGATGAGGCTGGCAGAGGCAGCTGCGGCTGCCGCGGCGGCTTCAAAAAACTAAGATGGATATGTTTGGTTATGTCGTGGTAACTCCCATTGTTTGGGAGAAAATAATGTGCTTGTTGGAAAAATTATTTGGGAGAAACTAATGTGCTTGTTGGAAAAGAATAGATTTAGTTGATTTAGTGTTTTTTCTGTATCAGTATCTTGATTTATGTCTGAATAATGCAAGGAATATTCAATGAAGTCATGAAGATGCTTGTGTTTATTCAGTAGTTAGGGGATCTTTTTCTTCTGTTGGTGTCTATTAGTTTGTGTTTGCTTAGCTTTATTTATACTATCGTGAACTTTCTATATAAGTTTTTTTCTATGTGAGTTTTAAAATAATTGATTATAACTTTTTAAGTAAAGGCCGGAATGTTTTATTCTATTATTAAAAAAAAAAAAAAA] [+] EMBL AK103453 [aTACGCAGCAAAACACAATCC AAAGCGTGTTCATCCAATCATTCTCTGTTCCGCTCTCTCACCCCAGCGAGATGGCCGGATCAGGAGACGAGCTGATGCTGCTCGGC AAATGGCCAA GCCCATTCGTCACCAGGGTTGAGCTCGCGCTCGGCCTCAAGGGCCTCAGCTACGAGTACGTCAAGCAGGACCTCGTCAACAAGAGCGAGCTCCTCCTCGCCTCCAACCCGGTGCACAAGAAGATCCCCGTGCTCATCCACAACGGCAAGCCGGTCTGCGAGTCGTCAATCATCGTGCAGTACATCGACGAGGCC TTCCCC G ACG CCGGCGCC GGCGCCGCCCTGC TCCCCGCCGACCCCTACG AGC GCGCCGTCGCTCGC TTC T GGGTCGCCTACGTCGACGACAAGTTCGTTCCGGCATGGG TGG CGACGTTC AGAGGCAAGACGGAGGAGGAGAAGGCGGAGGGGATGAAGCAACTGCTCGCGGCGGTGGAGACGCTGGAGGGAGCCCTGAAGGATTGCTCCAAGGGGAAGCCCTTCTTCGGCGGCGACACAGTCGGGATCGTGGACGTCGCGCTTGGTGGCCTCATCTCGTGGGTGAAAGCGACCGAGGTGCTCGCTGGCTCCAAGATCTTCGACGAGGAGAAGGCCCCTCTTTTGGCCGCGTGGGCGCAGCGCTTCGGCGAGCTCGACGTCGCCGAGAAGGTGTTGCCGGATGTCGACGGGGTGGTCGAGTTCGCTAAGATGAGGCTGGCAGAGGCAGCTGCGGCTGCCGCGGCGGCTTCAAAAAACTAAGATGGATATGTTTGGTTATGTCGTGGTAACTCCCATTGTTTGGGAGAAAATAATGTGCTTGTTGGAAAAATTATTTGGGAGAAACTAATGTGCTTGTTGGAAAAGAATAGATTTAGTTGATTTAGTGTTTTTTCTGTATCAGTATCTTGATTTATGTCTGAATAATGCAAGGAATATTCAA ] [+] EMBL AF309378 [ cgACACAATCC AAAGCGTGTTCATCCAATCATTCTCTGTTCCGCTCTCTCACCCCAGCGAGATGGCCGGATCAGGAGACGAGCTGATGCTGCTCGGC AAATGGCCAA GCCCATTCGTCACCAGGGTTGAGCTCGCGCTCGGCCTCAAGGGCCTCAGCTACGAGTACGTCAAGCAGGACCTCGTCAACAAGAGCGAGCTCCTCCTCGCCTCCAACCCGGTGCACAAGAAGATCCCCGTGCTCATCCACAACGGCAAGCCGGTCTGCGAGTCGTCAATCATCGTGCAGTACATCGACGAGGCC TTCCCC G ACG CCGGCGCC GGCGCCGCCCTGC TCCCCGCCGACCCCTACG AGC GCGCCGTCGCTCGC TTC T GGGTCGCCTACGTCGACGACAAGTTCGTTCCGGCATGGG TGG CGACGTTC AGAGGCAAGACGGAGGAGGAGAAGGCGGAGGGGATGAAGCAACTGCTCGCGGCGGTGGAGACGCTGGAGGGAGCCCTGAAGGATTGCTCCAAGGGGAAGCCCTTCTTCGGCGGCGACACAGTCGGGATCGTGGACGTCGCGCTTGGTGGCCTCATCTCGTGGGTGAAAGCGACCGAGGTGCTCGCTGGCTCCAAGATCTTCGACGAGGAGAAGGCCCCTCTTTTGGCCGCGTGGGCGCAGCGCTTCGGCGAGCTCGACGTCGCCGAGAAGGTGTTGCCGGATGTCGACGGGGTGGTCGAGTTCGCTAAGATGAGGCTGGCAGAGGCAGCTGCGGCTGCCGCGGCGGCTTCAAAAAACTAAGATGGATATGTTTGGTTATGTCGTGGTAACTCCCATTGTTTGGGAGAAAATAATGTGCTTGTTGGAAAAATTATTTGGGAGAAACTAATGTGCTTGTTGGAAAAGAATAGATTTAGTTGATTTAGTGTTTTTTCTGTATCAGTATCTTGATTTATGTCTGAATAATGCAAGGAATATTCAATGAAGTCATGAAAAAAAAAAA ] [+] EMBL C26141 [ CACAATCC AAAGCGTGTTCATCCAATCATTCTCTGTTCCGCTCTCTCACCCCAGCGAGATGGCCGGNTCAGGAGACGAGCTGATGCTTGTTGGCAAAATGGCCAN GCCCATTCGTNACCAGGGTTGAGCTCGCGCTCGGCCTCAAGGGCCTCAGCTACGAGTACGTCAAGCAGGACCTCGTCAACAAGAGCGAGCTCCTCCTCGCCTCCAACCCGGTGCACAAGAAGATCCCCGTGCTCATCCACAACGGCAAGCCGGTCTGCGAGTCGTCAATCATCGTGCAGTACATCGAGGAGGCC TTNCCC G An ] [+] EMBL OSC104281 [ AATCC AAAGCGTGTTCATCCAATCATTCTCTGTTCCGCTCTCTCACCCCAGCGAGATGGCCGGATCAGGAGACGAGCTGATGCTGCTCGGC AAATGGCCAA GCCCATTCGTCACCAGGGTTGAGCTCGCGCTCGGCCTCAAGGGCCTCAGCTACGAGTACGTCAAGCAGGACCTCGTCAACAAGAGCGAGCTCCTCCTCGCCTCCAACCCGGTGCACAAGAAGATCCCCGTGCTCATCCACAACGGCAAGCCGGTCTGCGAGTCGTCAATCATCGTGCAGTACATCGACGAGGCC ] [+] EMBL AU063089 [ AAAGCGTGTTCATCCAATCATTCTCTGTTCCGCTCTCTCACCCCAGCGAGATGGCCGGATCAGGAGACGAGCTGATGCTGCTCGGC AAATGGCCAA GCCCATTCGTCACCAGGGTTGAGCTCGCGCTCGGCCTCAAGGGCCTCAGCTACGAGTACGTCAAGCAGGACCTCGTCAACAAGAGCGAGCTCCTCCTCGCCTCCAACCCGGTGCACAAGAAGATCCCCGTGCTCATCCACAACGGCAAGCCGGTCTGCGAGTCGTCAATCATCGTGCAGTACATCGACGAGGCC TTCCCC G ACG CCGGCGCC GGCGCCGCCCTGC TCCCCGCCGACCCCTACG AGC GCGCCGTCGCTCGC TTC T GGGTCGCCTACGTCGACGACAA ] [+] EMBL C26329 [ AAAGCGTGTTCATCCAATCATTCTCTGTTCCGCTCTCTCACCCCAGCGAGATGGCCGGATCAGGAGACGAGCTGATGCTGCTCGGC AAATGGCCAA GCCCATTCGTCACCAGGGTTGAGCTCGCGCTCGGCCTCAAGGG CTCAGCTACGAGTACGTCAAGCAGGACCTCGTCAACAAGAGCGAGCTCCTCCTCGCCTCCAACCCGGTGCACAAGAAGATCCCCGTGCTCATCCACAACGGCAAGCCGGTCTGCGAGTCGTCAATCATCGTGCAGTACATCGACGAGGCC TTCCCC G ACG GCGGCGCCGGGCGCC CCTTGCTTCCCCGCCGACCCCTACG AGC GCGNCGTCG TTGCTTTCTT GGGTCG CTACGTCGACGACAAGTTCGTTTCGGCATGGGTTGG CGACGTTCAAGAGGCAAGACGGAAGAagg ] [+] EMBL OSS4519A [ AAGCGTGTTCATCCAATCATTCTCTGTTCCGCTCTCTCACCCCAGCGAGATGGCCGGNTCAGGAGACGAGCTGATGCTGCTCGGC AAATGGCCAA GCCCATTCGTCACCAGGGTTGAGCTCGCGCTCGGCCTCAAGGGCCTCAGCTACGAGTACGTCAAGCAGGACCTCGTCAACAAGAGCGAGCTCCTCCTCGCCTCCAACCCGGTGCACAAGAAGATCCCCGTGCTCATCCACAACGGCAAGCCGGTCTGCGAGTNGTCAATCATCGTGCAGTACATCGACGAGGGC TTCCCC G ANG CCGGCGCC GG GCCGCCCTGC TCCCCGCNGACCCCTACG AGC GCGCCGTCGTTNGT TTC T GGGTCGCCT ] [+] EMBL C26655 [ CGTGTTCATCCAATCATTCTCTGTTCCGCTCTCTCACCCCAGCGAGATGGCCGGATCAGGAGACGAGCTGATGCTGCTCGGCAAAATGGCCAAGGCCCATTCGTCACCAGGGTTGAGCTCGCGCTCGGCCTCAAGGGCCTCAGCTACGAGTACGTCAAGCAGGACCTCGTCAACAAGAGCGAGCTCCTCCTCGCCTCCAACCCGGTGCACAAGAAGATCCCCGTGCTCATCCACAACGGCAAGCCGGTCTGCGAGTCGTCAATNATCGTGCAGTACATCGACGAGGCC TTCCCC G ACG CCGGCGCC GGGGNCGCCCTGC TTCCCGCCGACCCCTACG AGC GCGCCGTCGGTCGN TTC T GGG ] [+] EMBL AU092712 [ GTGCTCATCCACAACGGCAAGCCGGTCTGCGAGTCGTCAATCATCGTGCAGTACATCGACGAGGCC TTCCCC G ACG CCGGCGCC GGCGCCGCCCTGC TCCCCGCCGACCCCTACG AGC GCGCCGTCGCTCGC TTC T GGGTCGCCTACGTCGACGACAAGTTCGTTCCGGCATGGG TGG CGACGTTC AGAGGCAAGACGGAGGAGGAGAAGGCGGAGGGGATGAAGCAACTGCTCGCGGCGGTGGAGACGCTGGAGGGAGCCCTGAAGGATTGCTCCAAGGGGAAGCCCTTCTTCGGCGGCGACACAGTCGGGATCGTGGACGTCGCGCTTGGTGGCCTCATCTCGTGGGTGAAAGCGACCGAGGTGCTCGCTGGCTCCAAGATCTTCGACGAGGAGAAGGCCCCTCTTTTGGCCGCGTGGGCGCAGCGCTTCGGCGAGCTCGACGTCGCCGAGAAGGTGTTGCCGGATGTCGACGGGGTGGTCGAGTTCGCTAAGATGAGGCTGGCAGAGGCAGCTGCGGCTGCCGCGGCGGCTTCAAAAAACTAAGATGGATATGTTTGGTTATGTCGTGGTAACTCCCATTGTTTGGGAGAAAATAATGTGCTTGTTGGAAAAATTATTTGGGAGAAACTAATGTGCTTGTTGGAAAAAAAna ] [+] EMBL AU092711 [ CCACAACGGCAAGCCGGTCTGCGAGTCGTCAATCATCGTGCAGTACATCGACGAGGCC TTCCCC G ACG CCGGCGCC GGCGCCGCCCTGC TCCCCGCCGACCCCTACG AGC GCGCCGTCGCTCGC TTC T GGGTCGCCTACGTCGACGACAAGTTCGTTCCGGCATGGG TGG CGACGTTC AGAGGCAAGACGGAGGAGGAGAAGGCGGAGGGGATGAAGCAACTGCTCGCGGCGGTGGAGACGCTGGAGGGAGCCCTGAAGGATTGCTCCAAGGGGAAGCCCTTCTTCGGCGGCGACACAGTCGGGATCGTGGACGTCGCGCTTGGTGGCCTCATCTCGTGGGTGAAAGCGACCGAGGTGCTCGCTGGCTCCAAGATCTTCGACGAGGAGAAGGCCCCTCTTTTGGCCGCGTGGGCGCAGCGCTTCGGCGAGCTCGACGTCGCCGAGAAGGTGTTGCCGGATGTCGACGGGGTGGTCGAGTTCGCTAAGATGAGGCTGGCAGAGGCAGCTGCGGCTGCCGCGGCGGCTTCAAAAAACTAAGATGGATATGTTTGGTTATGTCGTGGTAACTCCCATTGTTTGGGAGAAAATAATGTGCTTGTTGGAAAAATTATTTGGGAGAAACTAATGTGCTTGTTGGAAAAAAAaa ] [+] EMBL AU092078 [ AGTACATCGACGAGGCN TTCNCC GAACG CCGGCGCCGGGCGCCGCCTTGC TCCCCGCCGACCCCTACG AGCGGCGCCGTCGCTCGC TTC T GGGTCGCCTACGTCGACGACAAGTTCGTTCCGGCATGGG TGG CGACGTTCAAGAGGCAAGACGGAGGAGGAGAAGGCGGAGGGGATGAAGCAACTGCTCGCGGCGGTGGAGACGCTGGAGGGAGCCCTGAAGGATTGCTCCAAGGGGAAGCCCTTCTTCGGCGGCGACACAGTCGGGATCGTGGACGTCGCGCTTGGTGGCCTCATCTCGTGGGTGAAAGCGACCGAGGTGCTCGCTGGCTCCAAGATCTTCGACGAGGAGAAGGCCCCTCTTTTGGCCGCGTGGGCGCAGCGCTTCGGCGAGCTCGACGTCGCCGAGAAGGTGTTGCCGGATGTCGACGGGGTGGTCGAGTTCGCTAAGATGAGGCTGGCAGAGGCAGCTGCGGCTGCCGCGGCGGCTTCAAAAAACTAAGATGGATATGTTTGGTTATGTCGTGGTAACTCCCATTGTTTGGGAGAAAATAATGTGCTTGTTGGAAAAATTATTTGGGAGAAACTAATGTGCTTGTTGGAAAAGAATAGATTTAGTTGATTTAGTGTTTTTTCTGTATCAGTATCTTGATTTATGTCTGAATAATGCAAGGAATATTCAATGAAGTCA AAAAAA ] [+] EMBL AU100755 [ TACATCGACGA GCC TTCCCCNA ACG CCGGCGCC GGCGCCGCCCTGC TCCCCGCCGACCCCTACG AGC GCGCCGTCGCTCGC TTC TGGGGTCGCCTACGTCGACGACAAGTTCGTTCCGGCATGGG TGG CGACGTTC AGAGGCAAGACGGAGGAGGAGAAGGCGGAGGGGATGAAGCAACTGCTCGCGGCGGTGGAGACGCTGGAGGGAGCCCTGAAGGATTGCTCCAAGGGGAAGCCCTTCTTCGGCGGCGACACAGTCGGGATCGTGGACGTCGCGCTTGGTGGCCTCATCTCGTGGGTGAAAGCGACCGAGGTGCTCGCTGGCTCCAAGATCTTCGACGAGGAGAAGGCCCCTCTTTTGGCCGCGTGGGCGCAGCGCTTCGGCGAGCTCGACGTCGCCGAGAAGGTGTTGCCGGATGTCGACGGGGTGGTCGAGTTCGCTAAGATGAGGCTGGCAGAGGCAGCTGCGGCTGCCGCGGCGGCTTCAAAAAACTAAGATGGATATGTTTGGTTATGTCGTGGTAACTCCCATTGTTTGGGAGAAAATAATGTGCTTGTTGGAAAAATTATTTGGGAGAAACTAATGTGCTTGTTGGAAAAGAATAGATTTAGTTGATTTAGTGTTTTTTCTGTATCAGTATCTTGATTTATGTCTGAATAATGCAAGGAATATTCAATGAAGTCATGAAAAAAAAAAAa ] [+] EMBL AU108266 [ CGAAGCCTTTTCCCC GAACGCCCGGCGCC GGCGCCGCCTTCT TCCCCGCCGACCCCTACGAACC GCGCCGTCGCTCGC TTC T GGGTCGCCTACGTCGACGACAAGTTCGTTCCGGCATGGG TGGCCGACGTTC AGAGGCAAGACGGAGGAGGAGAAGGCGGAGGGGATGAAGCAACTGCTCGCGGCGGTGGAGACGCTGGAGGGAGCCCTGAAGGATTGCTCCAAGGGGAAGCCCTTCTTCGGCGGCGACACAGTCGGGATCGTGGACGTCGCGCTTGGTGGCCTCATCTCGTGGGTGAAAGCGACCGAGGTGCTCGCTGGCTCCAAGATCTTCGACGAGGAGAAGGCCCCTCTTTTGGCCGCGTGGGCGCAGCGCTTCGGCGAGCTCGACGTCGCCGAGAAGGTGTTGCCGGATGTCGACGGGGTGGTCGAGTTCGCTAAGATGAGGCTGGCAGAGGCAGCTGCGGCTGCCGCGGCGGCTTCAAAAAACTAAGATGGATATGTTTGGTTATGTCGTGGTAACTCCCATTGTTTGGGAGAAAATAATGTGCTTGTTGGAAAAATTATTTGGGAGAAACTAATGTGCTTGTTGGAAAAGAATAGATTTAGTTGATTTAGTGTTTTTTCTGTATCAGTATCTTGATTTATGTCTGAATAATGCAAGGAATATTCAATGAAGTCATGAAAAAAAAAAA ] consensusID : consensus_14550#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 519 fasta sequence [CCCTGAAGGATTGCNCCAAGGGGAANCCCTTCTTCCGCCGGCGACACAGTCGGGATCGTGGACGTCGCGCTTGGTNCCCTCATCTCGTGGTTGAAAGCGACCGAGGTGCTCGCTGGCTCCCAAGATCTTCGACGAGGAGAAGCCCCCTCTTTTGGCCGCGTGGGCGCAGCGCTTCGNCGAGCTCGACGTCNCCGAGAAGGTGTTNCCGGATGTCGACGGGGTGGTCGAGTTCNCTAAGATGAGGCTGGCAGAAGGCAGCTGCGGCTGCCGCGGCGGCTTCAAAAAACTAAGATGGATATGTTTGGTTATGTCGTGGTAACTCCCATTGTTTGGGAGNAAATAATGTGCTTGTTGGAAAAATTATTTGGGAGAAACTAATGTGCTTGTTGGAAAAGAATAGATTTAGTTGATTTAGTGTTTTTTCTGTATCAGTATCTTGATTTATGTCTGAATAATGCAAGGAATATTCAATGAAGTCATGAAGATGCTTGTCCTCTGTTTATTCAGTAAAAAAAAAAA] [+] EMBL AU097382 [CCCTGAAGGATTGCNCCAAGGGGAANCCCTTCTTCCGCCGGCGACACAGTCGGGATCGTGGACGTCGCGCTTGGTNCCCTCATCTCGTGGTTGAAAGCGACCGAGGTGCTCGCTGGCTCCCAAGATCTTCGACGAGGAGAAGCCCCCTCTTTTGGCCGCGTGGGCGCAGCGCTTCGNCGAGCTCGACGTCNCCGAGAAGGTGTTNCCGGATGTCGACGGGGTGGTCGAGTTCNCTAAGATGAGGCTGGCAGAAGGCAGCTGCGGCTGCCGCGGCGGCTTCAAAAAACTAAGATGGATATGTTTGGTTATGTCGTGGTAACTCCCATTGTTTGGGAGNAAATAATGTGCTTGTTGGAAAAATTATTTGGGAGAAACTAATGTGCTTGTTGGAAAAGAATAGATTTAGTTGATTTAGTGTTTTTTCTGTATCAGTATCTTGATTTATGTCTGAATAATGCAAGGAATATTCAATGAAGTCATGAAGATGCTTGTCCTCTGTTTATTCAGTAAAAAAAAAAA] consensusID : consensus_14550#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 437 fasta sequence [TCGACGTCGCCGAGAAGGTGTTGCCGGATGTCGACGGGGTGGTCGAGTTCGCTAAGATGAGGCTGGCAGAGGCAGCTGCGGCTGCCGCGGCGGCTTCAAAAAAACTAAGATGGATATGTTTGGTTATGTCGTGGTAACTCCCATTGTTTGGGAGAAAATAATGTGCTTGTTGGAAAAATTATTTGGGAGAAACTAATGTGCTTGTTGGAAAAGAATAGATTTAGTTGATTTAGTGTTTTTTCTGTATCAGTATCTTGATTTATGTCTGAATAATGCAAGGAATATTCAATGAAGTCATGAAGATGCTTGTCCTCTGTTTATTCAGTAGTTAGGGGATCTTTTTCTTCTGTTGGTGTCTATTAGTTTGTGTTTGCTTAGCTTTGTTTATACTATCGTGAACTTTCTATATAAGTTTTTTTCTGTGTGAGTTCTAAAAA] [+] EMBL AU181325 [TCGACGTCGCCGAGAAGGTGTTGCCGGATGTCGACGGGGTGGTCGAGTTCGCTAAGATGAGGCTGGCAGAGGCAGCTGCGGCTGCCGCGGCGGCTTCAAAAAAACTAAGATGGATATGTTTGGTTATGTCGTGGTAACTCCCATTGTTTGGGAGAAAATAATGTGCTTGTTGGAAAAATTATTTGGGAGAAACTAATGTGCTTGTTGGAAAAGAATAGATTTAGTTGATTTAGTGTTTTTTCTGTATCAGTATCTTGATTTATGTCTGAATAATGCAAGGAATATTCAATGAAGTCATGAAGATGCTTGTCCTCTGTTTATTCAGTAGTTAGGGGATCTTTTTCTTCTGTTGGTGTCTATTAGTTTGTGTTTGCTTAGCTTTGTTTATACTATCGTGAACTTTCTATATAAGTTTTTTTCTGTGTGAGTTCTAAAAA] consensusID : consensus_14550#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 304 fasta sequence [TCNATATNCCTAATAGCNGTGGTTCATCCAATCATTCTCTGTTCCGCTCTCTCACCCCAGCGAGATGGCCGGATCAGGAGACGAGCTGATGCTGCTCGGCAAATGGCCAAGCCCATTCGTCACCAGGGTTGAGCTCGCGCTCGGCCTCAAGGGCTNCAGCTACGAGTACGTCAAGCAGGACCTCGTCAACAAGAGCGAGCTCCTCCTCGCCTCCAACCCGGTGCACAAGAAGATCCCCGTGCTCATCCACAACGGCAAGCCGGTCTGCGAGTCGTCAATCATCGTGCAGTACATCGACGAGGCC] [+] EMBL AU063088 [TCNATATNCCTAATAGCNGTGGTTCATCCAATCATTCTCTGTTCCGCTCTCTCACCCCAGCGAGATGGCCGGATCAGGAGACGAGCTGATGCTGCTCGGCAAATGGCCAAGCCCATTCGTCACCAGGGTTGAGCTCGCGCTCGGCCTCAAGGGCTNCAGCTACGAGTACGTCAAGCAGGACCTCGTCAACAAGAGCGAGCTCCTCCTCGCCTCCAACCCGGTGCACAAGAAGATCCCCGTGCTCATCCACAACGGCAAGCCGGTCTGCGAGTCGTCAATCATCGTGCAGTACATCGACGAGGCC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14550#1 ------------------------------------------------------------ consensus_14550#2 ------------------------------------------------------------ consensus_14550#0 GTACGCAGCAAAACACAATCCAAAGCGTGTTCATCCAATCATTCTCTGTTCCGCTCTCTC 60 consensus_14550#3 ------------------------------------------------------------ consensus_14550#1 ------------------------------------------------------------ consensus_14550#2 ------------------------------------------------------------ consensus_14550#0 ACCCCAGCGAGATGGCCGGATCAGGAGACGAGCTGATGCTGCTCGGCAAATGGCCAAGCC 120 consensus_14550#3 ------------------------------------------------------------ consensus_14550#1 ------------------------------------------------------------ consensus_14550#2 ------------------------------------------------------------ consensus_14550#0 CATTCGTCACCAGGGTTGAGCTCGCGCTCGGCCTCAAGGGCCTCAGCTACGAGTACGTCA 180 consensus_14550#3 ------------------------------------------------------------ consensus_14550#1 ------------------------------------------------------------ consensus_14550#2 ------------------------------------------------------------ consensus_14550#0 AGCAGGACCTCGTCAACAAGAGCGAGCTCCTCCTCGCCTCCAACCCGGTGCACAAGAAGA 240 consensus_14550#3 ------------------------------------------------------------ consensus_14550#1 ------------------------------------------------------------ consensus_14550#2 ------------------------------------------------------------ consensus_14550#0 TCCCCGTGCTCATCCACAACGGCAAGCCGGTCTGCGAGTCGTCAATCATCGTGCAGTACA 300 consensus_14550#3 ------------------------------------------------------------ consensus_14550#1 ------------------------------------------------------------ consensus_14550#2 ------------------------------------------------------------ consensus_14550#0 TCGACGAGGCCTTCCCCGACGCCGGCGCCGGCGCCGCCCTGCTCCCCGCCGACCCCTACG 360 consensus_14550#3 ------------------------------------------------------------ consensus_14550#1 ------------------------------------------------------------ consensus_14550#2 ------------------------------------------------------------ consensus_14550#0 AGCGCGCCGTCGCTCGCTTCTGGGTCGCCTACGTCGACGACAAGTTCGTTCCGGCATGGG 420 consensus_14550#3 ------------------------------------------------------------ consensus_14550#1 ------------------------------------------------------------ consensus_14550#2 ------------------------------------------------------------ consensus_14550#0 TGGCGACGTTCAGAGGCAAGACGGAGGAGGAGAAGGCGGAGGGGATGAAGCAACTGCTCG 480 consensus_14550#3 ------------------------------------------------------------ consensus_14550#1 ------------------------CCCTGAAGGATTGCNCCAAGGGGAANCCCTTCTTCC 36 consensus_14550#2 ------------------------------------------------------------ consensus_14550#0 CGGCGGTGGAGACGCTGGAGGGAGCCCTGAAGGATTGCTCCAAGGGGAAGCCCTTCTTCG 540 consensus_14550#3 ------------------------------------------------------------ consensus_14550#1 GCCGGCGACACAGTCGGGATCGTGGACGTCGCGCTTGGTNCCCTCATCTCGTGGTTGAAA 96 consensus_14550#2 ------------------------------------------------------------ consensus_14550#0 GC-GGCGACACAGTCGGGATCGTGGACGTCGCGCTTGGTGGCCTCATCTCGTGGGTGAAA 599 consensus_14550#3 ------------------------------------------------------------ consensus_14550#1 GCGACCGAGGTGCTCGCTGGCTCCCAAGATCTTCGACGAGGAGAAGCCCCCTCTTTTGGC 156 consensus_14550#2 ------------------------------------------------------------ consensus_14550#0 GCGACCGAGGTGCTCGCTGGCTCC-AAGATCTTCGACGAGGAGAAGGCCCCTCTTTTGGC 658 consensus_14550#3 ------------------------------------------------------------ consensus_14550#1 CGCGTGGGCGCAGCGCTTCGNCGAGCTCGACGTCNCCGAGAA-GGTG--TTNCCGGATGT 213 consensus_14550#2 --------------------------TCGACGTCGCCGAGAA-GGTG--TTGCCGGATGT 31 consensus_14550#0 CGCGTGGGCGCAGCGCTTCGGCGAGCTCGACGTCGCCGAGAA-GGTG--TTGCCGGATGT 715 consensus_14550#3 --------------------------TCNATATNCCTAATAGCNGTGGTTCATCCAATCA 34 ** * * * * * *** * * ** consensus_14550#1 CGACGGGGTGGTCGAGTTCNCTAAGATGAGGCTGGCAGAAGGCAGCTGCGGCTGCCGCGG 273 consensus_14550#2 CGACGGGGTGGTCGAGTTCGCTAAGATGAGGCTGGCAGA-GGCAGCTGCGGCTGCCGCGG 90 consensus_14550#0 CGACGGGGTGGTCGAGTTCGCTAAGATGAGGCTGGCAGA-GGCAGCTGCGGCTGCCGCGG 774 consensus_14550#3 TTCTCTGTTCCGCTCTCTCACCCCAGCGAGATGGCCGGA--TCAGGAGACGA-GCTGATG 91 * * * ** * *** * * ** *** * * ** * * consensus_14550#1 CGGCTTCAAAAAA-CTAAGATGGATATGTTTGGTTATGTCGTGGTAACTCCCATTGTTTG 332 consensus_14550#2 CGGCTTCAAAAAAACTAAGATGGATATGTTTGGTTATGTCGTGGTAACTCCCATTGTTTG 150 consensus_14550#0 CGGCTTCAAAAAA-CTAAGATGGATATGTTTGGTTATGTCGTGGTAACTCCCATTGTTTG 833 consensus_14550#3 CTGCTCGGCAAATGGCCAAGCCCATTCGTC-ACCAGGGTTGAGCTCGCGCTCGGCCTCAA 150 * *** *** * ** ** ** * * * * * * * consensus_14550#1 GGAGNA-AATAATGTGCTTGTTGGA-AAAATTATTTGGGAGAAACTAATGTGCTTGTTGG 390 consensus_14550#2 GGAGAA-AATAATGTGCTTGTTGGA-AAAATTATTTGGGAGAAACTAATGTGCTTGTTGG 208 consensus_14550#0 GGAGAA-AATAATGTGCTTGTTGGA-AAAATTATTTGGGAGAAACTAATGTGCTTGTTGG 891 consensus_14550#3 GGGCTNCAGCTACGAGTACGTCAAGCAGGACCTCGTCAACAAGAGCGAGCTCCTCCTCGC 210 ** * * * * ** * * * * * * * ** * * consensus_14550#1 AAAAGAATAGATTTA---GTTGATTTAGTGTTTTTTCTGTATCAGTATCTTGATTTATGT 447 consensus_14550#2 AAAAGAATAGATTTA---GTTGATTTAGTGTTTTTTCTGTATCAGTATCTTGATTTATGT 265 consensus_14550#0 AAAAGAATAGATTTA---GTTGATTTAGTGTTTTTTCTGTATCAGTATCTTGATTTATGT 948 consensus_14550#3 CTCCAACCCGGTGCACAAGAAGATCCCCGTGCTCATCCACAACGGCAAGCCGGTCTGCGA 270 * * * * * *** * ** * * * * * * * * consensus_14550#1 CTGAATAATG--CAAGGAATAT-TCAATGAAGTCATGAAGATGCTTGTCCTCTGTTTATT 504 consensus_14550#2 CTGAATAATG--CAAGGAATAT-TCAATGAAGTCATGAAGATGCTTGTCCTCTGTTTATT 322 consensus_14550#0 CTGAATAATG--CAAGGAATAT-TCAATGAAGTCATGAAAAAAAAAAA-----GTTTATT 1000 consensus_14550#3 GTCGTCAATCATCGTGCAGTACATCGACGAGGCC-------------------------- 304 * *** * * * ** ** * ** * * consensus_14550#1 CAGTAAAAAAAAAAA--------------------------------------------- 519 consensus_14550#2 CAGTAGTTAGGGGATCTTTTTCTTCTGTTGGTGTCTATTAGTTTGTGTTTGCTTAGCTTT 382 consensus_14550#0 CAGTAGTTAGGGGATCTTTTTCTTCTGTTGGTGTCTATTAGTTTGTGTTTGCTTAGCTTT 1060 consensus_14550#3 ------------------------------------------------------------ consensus_14550#1 ------------------------------------------------------------ consensus_14550#2 GTTTATACTATCGTGAACTTTCTATATAAGTTTTTTTCTGTGTGAGTTCTAAAAA----- 437 consensus_14550#0 ATTTATACTATCGTGAACTTTCTATATAAGTTTTTTTCTATGTGAGTTTTAAAATAATTG 1120 consensus_14550#3 ------------------------------------------------------------ consensus_14550#1 ------------------------------------------------------------ consensus_14550#2 ------------------------------------------------------------ consensus_14550#0 ATTATAACTTTTTAAGTAAAGGCCGGAATGTTTTATTCTATTATTAAAAAAAAAAAAAAA 1180 consensus_14550#3 ------------------------------------------------------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||