These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14560#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 2129 fasta sequence [TGGACTGAAGGAGTAGAAAATCCTTCGTAGTGCAATTCACTTATACACGGAGTTTAATTA-GTTTATTGCCTTCTACAATGGATAGGATCTTCGCCCGTTTCTTTTGCTTCCTACTGATTGCGGCAGTAAGCCATGCAGCTGATCTGTCCCCCGAGCAATACTGGCGATCCATCCTCCCTAACACCCCAATGCCAAGCTCCATCTCCCAACTTCTTAACTACCCTTACTTGCCTGCTGTTAGATTACCTCGCCGTACGGATGCTGGTCAGCGCAACTACAAATCATCAGTTTCACATGTGGCTGAACGATCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTATGGCTGAACTATCTCACCGTGTAGATGATGGTCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCATACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGTCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTATAGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTATGGCTGAACTACCTCACCGTGCAGATGATGGTCAACGCAACTACAAGTTATCAGTTTCACCTGCTGCTGAACTACCTCACCGTGTAGATGATGGTCAACGCAATTACAAGTTATCAGTTTTACCTGCCACTGAACTAGTTCACTATACAGATGGTCAACGCAATTACAAGTCATCAGTTTTGGAGACGCCAGAACTTCTCAAAGACCCCGACATGGCGCTCTTCTTCCTTGAGAAGAATCTTCAACAAGGTAAAAAAATTAATAACGCCCTCCACTTCGCCAACTTGTTGGCCACTACGAACTCCAAGTTCCTGCCACGAGGCAAGGCGGACTCCATCCCGTTCTCCTCTAAAGAACTACCCGAGATCCTGGACCGGTTCGGGGTGCGGCCGGGCTCCGACGACGCGGCTGAGATGAGTGCTACGCTGCAGGACTGCGAGCTGCCGGCGAATAAGGGAGAGAAGAAGGCCTGCGCCACGTCGCTGGAGTCTATAGTCGACTTCGTCACATCCAGCTTTGGGGCCAGTGACGTCGACGCCGCCTCCACCGTTGTGCTCAGTAAGGCGGTGGAGTCTTCTTCGCTGGCGCAGGACTACACGGTGAGCGGCGTGAGGCGAATGGCCGGAACCGGCCAGCTCATCGCTTGCCATCCGGAGTCGTACCCGTACGCTGTGTTCATGTGCCACCTCACAGAGGCGACGACGAGGGCGTACAAGGCCTCATTGGTCGGCAAAGATGGTACTGCGGTGGAGGCGGTCGCCGTGTGCCACACC-GACACGTCGGACTGGAACCCAGAGCACGCTGCCTTCCATGTGCTCGGCGTCAAGCCTGGGACTGTGCCTGTCTGCCACTTCATGCAGCCTGACGCTGTCGTCTGGACCCGCAGGGGCTGATGTATGTATGTATGCCATATAGTACCTACTTCATCGTACTGTACTGCGTACGCATGCTGCCAGCTGCTTTGCATACCTTGCTGCTGGAGATATATAATTAATATCCAGCACTTATATACTCGTCACTTCTATCGTGTGTCGAAGGTTATATACTTGTAGCATTTGGGGATGCAGTACGTACGTGTGTCTGTAATAAGTTTCGTGATATGTTGCTTCATCCATATGGACCATATGTACCACCAATCCCAGTGATATATAATAATATAATATCGTTGTCTAAAAAAAGGAAAAAGA] [+] EMBL CF276833 [TGGACTGAAGGAGTAGAAAATCCTTCGTAGTGCAATTCACTTATACACGGAGTTTAATTA GTTTATTGCCTTCTACAATGGATAGGATCTTCGCCCGTTTCTTTTGCTTCCTACTGATTGCGGCAGTAAGCCATGCAGCTGATCTGTCCCCCGAGCAATACTGGCGATCCATCCTCCCTAACACCCCAATGCCAAGCTCCATCTCCCAACTTCTTAACTACCCTTACTTGCCTGCTGTTAGATTACCTCGCCGTACGGATGCTGGTCAGCGCAACTACAAATCATCAGTTTCACATGTGGCTGAACGATCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGTTGGTCAACGCAACTACAAGTCATCAGTTTCACCTATGGCTGAACTATCTCACCGTGTAGATGATGGTCAACGCAACTACA ] [+] EMBL CF276565 [ TGAAGGAGTAGAAAATCCTTCGTAGTGCAATTCACTCATACACGGAGTTTAATTA GTTTATTGCCTTCTACAATGGATAGGATCTTCGCCCGTTTCTTTTGCTTCCTACTGATTGCGGCAGTAAGCCATGCAGCTGATCTGTCCCCCGAGCAATACTGGCGATCCATCCTCCCTAACACCCCAATGCCAAGCTCCATCTCCCAACTTCTTAACTACCCTTACTTGCCTGCTGTTAGATTACCTCGCCGTACGGATGCTGGTCAGCGCAACTACAAATCATCAGTTTCACATGTGGCTGAACGATCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGTTGGTCAACGCAACTACAAGTCATCAGTTTCACCTATGGCTGAACTATCTCACCGTGTAGATGATGGTCAACGCAACTACAAGTTATCAGCTNTACCTGCAACTAATGAACTACCTCACCATACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTG ] [+] EMBL AK067523 [ ATTCACTTATACACGGAGTTTAATTA GTTTATTGCCTTCTACAATGGATAGGATCTTCGCCCGTTTCTTTTGCTTCCTACTGATTGCGGCAGTAAGCCATGCAGCTGATCTGTCCCCCGAGCAATACTGGCGATCCATCCTCCCTAACACCCCAATGCCAAGCTCCATCTCCCAACTTCTTAACTACCCTTACTTGCCTGCTGTTAGATTACCTCGCCGTACGGATGCTGGTCAGCGCAACTACAAATCATCAGTTTCACATGTGGCTGAACGATCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTATGGCTGAACTATCTCACCGTGTAGATGATGGTCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCATACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGTCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTATAGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTATGGCTGAACTACCTCACCGTGCAGATGATGGTCAACGCAACTACAAGTTATCAGTTTCACCTGCTGCTGAACTACCTCACCGTGTAGATGATGGTCAACGCAATTACAAGTTATCAGTTTTACCTGCCACTGAACTAGTTCACTATACAGATGGTCAACGCAATTACAAGTCATCAGTTTTGGAGACGCCAGAACTTCTCAAAGACCCCGACATGGCGCTCTTCTTCCTTGAGAAGAATCTTCAACAAGGTAAAAAAATTAATAACGCCCTCCACTTCGCCAACTTGTTGGCCACTACGAACTCCAAGTTCCTGCCACGAGGCAAGGCGGACTCCATCCCGTTCTCCTCTAAAGAACTACCCGAGATCCTGGACCGGTTCGGGGTGCGGCCGGGCTCCGACGACGCGGCTGAGATGAGTGCTACGCTGCAGGACTGCGAGCTGCCGGCGAATAAGGGAGAGAAGAAGGCCTGCGCCACGTCGCTGGAGTCTATAGTCGACTTCGTCACATCCAGCTTTGGGGCCAGTGACGTCGACGCCGCCTCCACCGTTGTGCTCAGTAAGGCGGTGGAGTCTTCTTCGCTGGCGCAGGACTACACGGTGAGCGGCGTGAGGCGAATGGCCGGAACCGGCCAGCTCATCGCTTGCCATCCGGAGTCGTACCCGTACGCTGTGTTCATGTGCCACCTCACAGAGGCGACGACGAGGGCGTACAAGGCCTCATTGGTCGGCAAAGATGGTACTGCGGTGGAGGCGGTCGCCGTGTGCCACACC GACACGTCGGACTGGAACCCAGAGCACGCTGCCTTCCATGTGCTCGGCGTCAAGCCTGGGACTGTGCCTGTCTGCCACTTCATGCAGCCTGACACTGTCGTCTGGACCCGCAGGGGCTGATGTATGTATGTATGCCATATAGTACCTACTTCATCGTACTGTACTGCGTACGCATGCTGCCAGCTGCTTTGCATACCTTGCTGCTGGAGATATATAATTAATATCCAGCACTTATATACTCGTCACTTCTATCGTGTGTCGAAGGTTATATACTTGTAGCATTTGGGGATGCAGTACGTACGTGTGTCTGTAATAAGTTTCGTGATATGTTGCTTCATCCATATGGACCATATGTACCACCAATCCCAGTGATATATAATAATATAAT ] [+] EMBL CB649304 [ GAGTTTACTTATGTTTATTGCCTTCTACAATGGATAGGATCTTCGCCCGTTTCTTTTGCTTCCTACTGATTGCGGCAGTAAGCCATGCAGCTGATCTGTCCCCCGAGCAATACTGGCGATCCATCCTCCCTAACACCCCAATGCCAAGCTCCATCTCCCAACTTCTTAACTACCCTTACTTGCCTGCTGTTAGATTACCTCGCCGTACGGATGCTGGTCAGCGCAACTACAAATCATCAGTTTCACATGTGGCTGAACGATCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTATGGCTGAACTATCTCACCGTGTAGATGATGGTCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCATACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGTCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAA ] [+] EMBL CB637188 [ TTA GTTTATTGCCTTCTACAATGGATAGGATCTTCGCCCGTTTCTTTTGCTTCCTACTGATTGCGGCAGTAAGCCATGCAGCTGATCTGTCCCCCGAGCAATACTGGCGATCCATCCTCCCTAACACCCCAATGCCAAGCTCCATCTCCCAACTTCTTAACTACCCTTACTTGCCTGCTGTTAGATTACCTCGCCGTACGGATGCTGGTCAGCGCAACTACAAATCATCAGTTTCACATGTGGCTGAACGATCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTATGGCT ] [+] EMBL CB661676 [ TCCCTAACACCCCAATGCCAAGCTCCATCTCCCAACTTCTTAACTACCCTTACTTGCCTGCTGTTAGATTACCTCGCCGTACGGATGCTGGTCAGCGCAACTACAAATCATCAGTTTCACATGTGGCTGAACGATCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTATGGCTGAACTATCTCACCGTGTAGATGATGGTCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCATACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGTCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTATAGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTATGGCTGAACTACCTCACCGTGTAGATGATGGTCAACGCAATTACAAGTTATCAGTT ] [+] EMBL CB652273 [ CATACCTATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGTCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTATAGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTATGGCTGAACTACCTCACCGTGCAGATGATGGTCAACGCAACTACAAGTTATCAGTTTCACCTGCTGCTGAACTACCTCACCGTGTAGATGATGGTCAACGCAATTACAAGTTATCAGTTTTACCTGCCACTGAACTAGTTCACTATACAGATGGTCAACGCAATTACAAGTCATCAGTTTTGGAGACGCCAGAACTTCTCAAAGACCCCGACATGGCGCTCTTCTTCCTTGAGAAGAATCTTCAACAAGGTAAAAAAATTAATAACGCCCTCCACTTCGCCAACTTGTTGGCCACTACGAACTCCAAGTTCCTGCCACGAGGCAAGGCGGACTCCATCCCGTTCTCCTCTAAAGAACTACCCGAGATCCTGGACCGGTTCGGGGTGCGGCCGGGCTCCGACGACGCGGCTGAGATGA ] [-] EMBL CB652274 [ GGTGCGGCCGGGCTCCGACGACGCGGCTGAGATGAGTGCTACGCTGCAGGACTGCGAGCTGCCGGCGAATAAGGGAGAGAAGAAGGCCTGCGCCACGTCGCTGGAGTCTATAGTCGACTTCGTCACATCCAGCTTTGGGGCCAGTGACGTCGACGCCGCCTCCACCGTTGTGCTCAGTAAGGCGGTGGAGTCTTCTTCGCTGGCGCAGGACTACACGGTGAGCGGCGTGAGGCGAATGGCCGGAACCGGCCAGCTCATCGCTTGCCATCCGGAGTCGTACCCGTACGCTGTGTTCATGTGCCACCTCACAGAGGCGACGACGAGGGCGTACAAGGCCTCATTGGTCGGCAAAGATGGTACTGCGGTGGAGGCGGTCGCCGTGTGCCACACC GACACGTCGGACTGGAACCCAGAGCACGCTGCCTTCCATGTGCTCGGCGTCAAGCCTGGGACTGTGCCTGTCTGCCACTTCATGCAGCCTGACGCTGTCGTCTGGACCCGCAGGGGCTGATGTATGTATGTATGCCATATAGTACCTACTTCATCGTACTGTACTGCGTACGCATGCTGCCAGCTGCTTTGCATACCTTGCTGCTGGAGATATATAATTAATATCCAGCACTTATATACTCGTCACTTCTATCGTGTGTCGAAGGTTATATACTTGTAGCATTTGGGGATGCAGTAGGTACGTGTGTCTGTAATAAGTTTCGTGATATGTTGCTTCATCCATATGGACCATATGTACCACCAATCCCAAGGATATATAATAATATAATATC ] [-] EMBL CB661677 [ GGGCTCCGACGACGCGGCTGAGATGAGTGCTACGCTGCAGGACTGCGAGCTGCCGGCGAATAAGGGAGAGAAGAAGGCCTGCGCCACGTCGCTGGAGTCTATAGTCGACTTCGTCACATCCAGCTTTGGGGCCAGTGACGTCGACGCCGCCTCCACCGTTGTGCTCAGTAAGGCGGTGGAGTCTTCTTCGCTGGCGCAGGACTACACGGTGAGCGGCGTGAGGCGAATGGCCGGAACCGGCCAGCTCATCGCTTGCCATCCGGAGTCGTACCCGTACGCTGTGTTCATGTGCCACCTCACAGAGGCGACGACGAGGGCGTACAAGGCCTCATTGGTCGGCAAAGATGGTACTGCGGTGGAGGCGGTCGCCGTGTGCCACACC GACACGTCGGACTGGAACCCAGAGCACGCTGCCTTCCATGTGCTCGGCGTCAAGCCTGGGACTGTGCCTGTCTGCCACTTCATGCAGCCTGACGCTGTCGTCTGGACCCGCAGGGGCTGATGTATGTATGTATGCCATATAGTACCTACTTCATCGTACTGTACTGCGTACGCATGCTGCCAGCTGCTTTGCATACCTTGCTGCTGGAGATATATAATTAATATCCAGCACTTATATACTCGTCACTTCTATCGTGTGTCGAAGGTTATATACTTGTAGCATTTGGGGATGCAGTACGTACGTGTGTCTGTAATAAGTTTCGTGATATGTTGCTTCATCCATATGGACCATATGTACCACCAATCCCAGTGATATATAATAATATAATATCG ] [-] EMBL CB677439 [ CTCCGACGACGCGGCTGAGATGAGTGCTACGCTGCAGGACTGCGAGCTGCCGGCGAATAAGGGAGAGAAGAAGGCCTGCGCCACGTCGCTGGAGTCTATAGTCGACTTCGTCACATCCAGCTTTGGGGCCAGTGACGTCGACGCCGCCTCCACCGTTGTGCTCAGTAAGGCGGTGGAGTCTTCTTCGCTGGCGCAGGACTACACGGTGAGCGGCGTGAGGCGAATGGCCGGAACCGGCCAGCTCATCGCTTGCCATCCGGAGTCGTACCCGTACGCTGTGTTCATGTGCCACCTCACAGAGGCGACGACGAGGGCGTACAAGGCCTCATTGGTCGGCAAAGATGGTACTGCGGTGGAGGCGGTCGCCGTGTGCCACACC GACACGTCGGACTGGAACCCAGAGCACGCTGCCTTCCATGTGCTCGGCGTCAAGCCTGGGACTGTGCCTGTCTGCCACTTCATGCAGCCTGACGCTGTCGTCTGGACCCGCAGGGGCTGATGTATGTATGTATGCCATATAGTACCTACTTCATCGTACTGTACTGCGTACGCATGCTGCCAGCTGCTTTGCATACCTTGCTGCTGGAGATATATAATTAATATCCAGCACTTATATACTCGTCACTTCTATCGTGTGTCGAAGGTTATATACTTGTAGCATTTGGGGATGCAGTACGTACGTGTGTCTGTAATAAGTTTCGTGATATGTTGCTTCATCCATATGGACCATATGTACCACCAATGCCAGTGATATATAATAATATAATATCGTTGTCTAAAAAAAGGA ] [-] EMBL CB649305 [ GCTACGCTGCAGGACTGCGAGCTGCCGGCGAATAAGGGAGAGAAGAAGGCCTGCGCCACGTCGCTGGAGTCTATAGTCGACTTCGTCACATCCAGCTTTGGGGCCAGTGACGTCGACGCCGCCTCCACCGTTGTGCTCAGTAAGGCGGTGGAGTCTTCTTCGCTGGCGCAGGACTACACGGTGAGCGGCGTGAGGCGAATGGCCGGAACCGGCCAGCTCATCGCTTGCCATCCGGAGTCGTACCCGTACGCTGTGTTCATGTGCCACCTCACAGAGGCGACGACGAGGGCGTACAAGGCCTCATTGGTCGGCAAAGATGGTACTGCGGTGGAGGCGGTCGCCGTGTGCCACACC GACACGTCGGACTGGAACCCAGAGCACGCTGCCTTCCATGTGCTCGGCGTCAAGCCTGGGACTGTGCCTGTCTGCCACTTCATGCAGCCTGACGCTGTCGTCTGGACCCGCAGGGGCTGATGTATGTATGTATGCCATATAGTACCTACTTCATCGTACTGTACTGCGTACGCATGCTGCCAGCTGCTTTGCATACCTTGCTGCTGGAGATATATAATTAATATCCAGCACTTATATACTCGTCACTTCTATCGTGTGTCGAAGGTTATATACTTGTAGCATTTGGGGATGCAGTACGTACGTGTGTCTGTAATAAGTTTCGTGATATGTTGCTTCATCCATATGGACCATATGTACCACCAATCCCAGTGATATATAATAATATAATATCGTTGTCTAGTACTAAAAAAAAGA] [+] EMBL CF325686 [ ACTTCGTCACATCCAGCTTTGGGGCCAGTGACGTCGACGCCGCCTCCACCGTTGTGCTCAGTAAGGCGGTGGAGTCTTCTTCGCTGGCGCAGGACTACACGGTGAGCGGCGTGAGGCGAATGGCCGGAACCGGCCAGCTCATCGCTTGCCATCCGGAGTCGTACCCGTACGCTGTGTTCATGTGCCACCTCACAGAGGCGACGACGAGGGCGTACAAGGCCTCATTGGTCGGCAAAGATGGTACTGCGGTGGAGGCGGTCGCCGTGTGCCACACC GACACGTCGG ] [-] EMBL CF276566 [ CCGGAGTCGTACCCGTACGCTGTGTTCATGTGCCACCTCACAGAGGCGACGACGAGGGCGTACAAGGCCTCATTGGTCGGCAAAGATGGTACTGCGGTGGAGGCGGTCGCCGTGTGCCACACC GACACGTCGGACTGGAACCCAGAGCACGCTGCCTTCCATGTGCTCGGCGTCAAGCCTGGGACTGTGCCTGTCTGCCACTTCATGCAGCCTGACGCTGTCGTCTGGACCCGCAGGGGCTGATGTATGTATGTATGCCATATAGTACCTACTTCATCGTACTGTACTGCGTACGCATGCTGCCAGCTGCTTTGCATACCTTGCTGCTGGAGATATATAATTAATATCCAGCACTTATATACTCGTCACTTCTATCGTGTGTCGAAGGTTATATACTTGTAGCATTTGGGGATGCAGTACGTACGTGTGTCTGTAATAAGTTTCGTGATATGTTGCTTCATCCAaaaaa ] [-] EMBL CF280750 [ GGAGTCGTACCCGTACGCTGTGTTCATGTGCCACCTCACAGAGGCGACGACGAGGGCGTACAAGGCCTCATTGGTCGGCAAAGATGGTACTGCGGTGGAGGCGGTCGCCGTGTGCCACACCNGACACGTCGGACTGGAACCCAGAGCACGCTGCCTTCCATGTGCTCGGCGTCAAGCCTGGGACTGTGCCTGTCTGCCACTTCATGCAGCCTGACGCTGTCGTCTGGACCCGCAGGGGCTGATGTATGTATGTATGCCATATAGTACCTACTTCATCGTACTGTACTGCGTACGCATGTTGCCAGCTGCTTTGCATACCTTGCTGCTGGAGATATATAATTAATATCCAGCACTTATATACTCGTCACTTCTATCGTAAAAAAAAGGTTATATACTTGTAGCATTTGGGGATGCAGTACGTACGTGTGTCTGTAATAAGTTTCGTGATATGTTGCTTCATCCATATGGACCATATGTACCACCAATCCCAGTGATATA ] [-] EMBL CF276834 [ CC GACACGTCGGACTGGAACCCAGAGCACGCTGCCTTCCATGTGCTCGGCGTCAAGCCTGGGACTGTGCCTGTCTGCCACTTCATGCAGCCTGACGCTGTCGTCTGGACCCGCAGGGGCTGATGTATGTATGTATGCCATATAGTACCTACTTCATCGTACTGTACTGCGTACGCATGCTGCCAGCTGCTTTGCATACCTTGCTGCTGGAGATATATAATTAATATCCAGCACTTATATACTCGTCACTTCTATCGTGTGTCGAAGGTTATATACTTGTAGCATTTGGGGATGCAGTACGTACGTGTGTCTGTAATAAGTTTCGTGATATGTTGCTTCATCCATATGGACCATATGTACCACCAATCCCAGTGATATATAATAATATAATATCGTTGTC ] consensusID : consensus_14560#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 806 fasta sequence [ACTTATACACGGAGTTTAATTAGTTTATTGCCTTCTACAATGGATAGGATCTTCGCCCGTTTCTTTTGCTTCCTACTGATTGCGGCAGTAAGCCATGCAGCTGATCTGTCCCCCGAGCAATACTGGCGATCCATCCTCCCTAACACCCCAATGCCAAGCTCCATCTCCCAACTTCTTAACTACCCTTACTTGCCTGCTGTTAGATTACCTCGCCGTACGGATGCTGGTCAGCGCAACTACAAATCATCAGTTTCACATGTGGCTGAACGATCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTATAGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTATGGCTGAACTACCTCACCGTGCAGATGATGGTCAACGCAACTACAAGTTATCAGTTTCACCTGCTGCTGAACTACCTCACCGTGTAGATGATGG] [+] EMBL CB677438 [ACTTATACACGGAGTTTAATTAGTTTATTGCCTTCTACAATGGATAGGATCTTCGCCCGTTTCTTTTGCTTCCTACTGATTGCGGCAGTAAGCCATGCAGCTGATCTGTCCCCCGAGCAATACTGGCGATCCATCCTCCCTAACACCCCAATGCCAAGCTCCATCTCCCAACTTCTTAACTACCCTTACTTGCCTGCTGTTAGATTACCTCGCCGTACGGATGCTGGTCAGCGCAACTACAAATCATCAGTTTCACATGTGGCTGAACGATCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTATAGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTATGGCTGAACTACCTCACCGTGCAGATGATGGTCAACGCAACTACAAGTTATCAGTTTCACCTGCTGCTGAACTACCTCACCGTGTAGATGATGG] consensusID : consensus_14560#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 484 fasta sequence [CATGCACTGAAGGAGTAGAAATCAGTTTCACCTATGGCTGAACTACCTCACCGTGCAGATGATGGTCAACGCAACTACAAGTTATCAGTTTCACCTGCTGCTGAACTACCTCACCGTGTAGATGATGGTCAACGCAATTACAAGTTATCAGTTTTACCTGCCACTGAACTAGTTCACTATACAGATGGTCAACGCAATTACAAGTCATCAGTTTTGGAGACGCCAGAACTTCTCAAAGACCCCGACATGGCGCTCTTCTTCCTTGAGAAGAATCTTCAACAAGGTAAAAAAATTAATAACGCCCTCCACTTCGCCATCTTGTTGGCCACTACGAACTCCAAGTTCCTGCCACGAGGCAAGGCGGACTCCATCCCGTTCTCCTCTAAAGAACTACCCGAGATCCTNGGACCGGTTCGGGGGTGCGGCCGGGCTCCGACGACGCGGCTGAGATGAGTGCTACGCTGCAGGACTGCGAGCTGCCGGC] [+] EMBL CF280749 [CATGCACTGAAGGAGTAGAAATCAGTTTCACCTATGGCTGAACTACCTCACCGTGCAGATGATGGTCAACGCAACTACAAGTTATCAGTTTCACCTGCTGCTGAACTACCTCACCGTGTAGATGATGGTCAACGCAATTACAAGTTATCAGTTTTACCTGCCACTGAACTAGTTCACTATACAGATGGTCAACGCAATTACAAGTCATCAGTTTTGGAGACGCCAGAACTTCTCAAAGACCCCGACATGGCGCTCTTCTTCCTTGAGAAGAATCTTCAACAAGGTAAAAAAATTAATAACGCCCTCCACTTCGCCATCTTGTTGGCCACTACGAACTCCAAGTTCCTGCCACGAGGCAAGGCGGACTCCATCCCGTTCTCCTCTAAAGAACTACCCGAGATCCTNGGACCGGTTCGGGGGTGCGGCCGGGCTCCGACGACGCGGCTGAGATGAGTGCTACGCTGCAGGACTGCGAGCTGCCGGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14560#0 TGGACTGAAGGAGTAGAAAATCCTTCGTAGTGCAATTCACTTATACACGGAGTTTAATTA 60 consensus_14560#1 --------------------------------------ACTTATACACGGAGTTTAATTA 22 consensus_14560#2 ------------------------------------------------------------ consensus_14560#0 GTTTATTGCCTTCTACAATGGATAGGATCTTCGCCCGTTTCTTTTGCTTCCTACTGATTG 120 consensus_14560#1 GTTTATTGCCTTCTACAATGGATAGGATCTTCGCCCGTTTCTTTTGCTTCCTACTGATTG 82 consensus_14560#2 ------------------------------------------------------------ consensus_14560#0 CGGCAGTAAGCCATGCAGCTGATCTGTCCCCCGAGCAATACTGGCGATCCATCCTCCCTA 180 consensus_14560#1 CGGCAGTAAGCCATGCAGCTGATCTGTCCCCCGAGCAATACTGGCGATCCATCCTCCCTA 142 consensus_14560#2 ------------------------------------------------------------ consensus_14560#0 ACACCCCAATGCCAAGCTCCATCTCCCAACTTCTTAACTACCCTTACTTGCCTGCTGTTA 240 consensus_14560#1 ACACCCCAATGCCAAGCTCCATCTCCCAACTTCTTAACTACCCTTACTTGCCTGCTGTTA 202 consensus_14560#2 ------------------------------------------------------------ consensus_14560#0 GATTACCTCGCCGTACGGATGCTGGTCAGCGCAACTACAAATCATCAGTTTCACATGTGG 300 consensus_14560#1 GATTACCTCGCCGTACGGATGCTGGTCAGCGCAACTACAAATCATCAGTTTCACATGTGG 262 consensus_14560#2 ------------------------------------------------------------ consensus_14560#0 CTGAACGATCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTG 360 consensus_14560#1 CTGAACGATCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTG 322 consensus_14560#2 --------------------------CATGCACTGAAGGAGTAGAAATCAGTTTCACCTA 34 ** ** * ** ***** ** **** consensus_14560#0 CCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTT 420 consensus_14560#1 CCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTT 382 consensus_14560#2 TGGCT---GAACTACCTCACCGTGCAGATGATGGTCAACGCAACTACAAGTTATCAGTTT 91 ** *************** * **** ******************** ******** consensus_14560#0 CACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAG 480 consensus_14560#1 CACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAG 442 consensus_14560#2 CACCTGCTGCTGAACTACCTCACCGTGTAGATGATGGTCAACGCAATTACAAGTTATCAG 151 ****** ***************************** ******** ************* consensus_14560#0 CTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGT 540 consensus_14560#1 CTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTA----- 497 consensus_14560#2 TTTTACCTGCCACT---GAACTAGTTCACTATACAGATG---GTCAACGCAATTA----- 200 ************* ****** **** *** **** ********** ** consensus_14560#0 CATCAGTTTCACCTATGGCTGAACTATCTCACCGTGTAGATGATGGTCAACGCAACTACA 600 consensus_14560#1 ----------------------------------------------------------CA 499 consensus_14560#2 ----------------------------------------------------------CA 202 ** consensus_14560#0 AGTTATCAGCTTT--ACCTGCCACTAATGAACTACCTCACCATACGGATGCTGGTCAACG 658 consensus_14560#1 AGTTATCAGCTTT--ACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACG 557 consensus_14560#2 AGTCATCAGTTTTGGAGACGCCAGAACTTCTCAAAGACCCCGACATGGCGCTCTTCTTCC 262 *** ***** *** * **** * * * * * ** * *** ** * consensus_14560#0 CAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGTCA 718 consensus_14560#1 CAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCA 617 consensus_14560#2 TTGAGAAGAATCTTCAACAAGGTAAAAAAATTAATAACGCCCTCCACTTCGCCATCTTGT 322 * * ** *** * ** ** * * * ** consensus_14560#0 ACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGC 778 consensus_14560#1 ACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTATAGATGC 677 consensus_14560#2 TGGCCACTACGAACTCCAAGTT---CCTGCCACGAGGCAAGGCGGACTCCATCCCGTT-C 378 ** ***** * * ** * ******** * ** * ** * * * * consensus_14560#0 TGGTCAACGCAACTAC---AAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGT 835 consensus_14560#1 TGGTCAACGCAACTAC---AAGTCATCAGTTTCACCTATGGCTGAACTACCTCACCGTGC 734 consensus_14560#2 TCCTCTAAAGAACTACCCGAGATCCTNGGACCGGTTCGGGGGTG--CGGCCGGGCTCCGA 436 * ** * ****** * ** * * ** ** * ** * * consensus_14560#0 AGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCA 895 consensus_14560#1 AGATGATGGTCAACGCAACTACAAGTTATCAGTTTCACCTGCTGCT---GAACTACCTCA 791 consensus_14560#2 CGACG-CGGCTGAGATGAGTGCTACGCTGCAGGACTGCGAGCTGCCGGC----------- 484 ** * ** * * * * * *** * ** * consensus_14560#0 CCGTATAGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTATGGCTGAACTACC 955 consensus_14560#1 CCGTGTAGATGATGG--------------------------------------------- 806 consensus_14560#2 ------------------------------------------------------------ consensus_14560#0 TCACCGTGCAGATGATGGTCAACGCAACTACAAGTTATCAGTTTCACCTGCTGCTGAACT 1015 consensus_14560#1 ------------------------------------------------------------ consensus_14560#2 ------------------------------------------------------------ consensus_14560#0 ACCTCACCGTGTAGATGATGGTCAACGCAATTACAAGTTATCAGTTTTACCTGCCACTGA 1075 consensus_14560#1 ------------------------------------------------------------ consensus_14560#2 ------------------------------------------------------------ consensus_14560#0 ACTAGTTCACTATACAGATGGTCAACGCAATTACAAGTCATCAGTTTTGGAGACGCCAGA 1135 consensus_14560#1 ------------------------------------------------------------ consensus_14560#2 ------------------------------------------------------------ consensus_14560#0 ACTTCTCAAAGACCCCGACATGGCGCTCTTCTTCCTTGAGAAGAATCTTCAACAAGGTAA 1195 consensus_14560#1 ------------------------------------------------------------ consensus_14560#2 ------------------------------------------------------------ consensus_14560#0 AAAAATTAATAACGCCCTCCACTTCGCCAACTTGTTGGCCACTACGAACTCCAAGTTCCT 1255 consensus_14560#1 ------------------------------------------------------------ consensus_14560#2 ------------------------------------------------------------ consensus_14560#0 GCCACGAGGCAAGGCGGACTCCATCCCGTTCTCCTCTAAAGAACTACCCGAGATCCTGGA 1315 consensus_14560#1 ------------------------------------------------------------ consensus_14560#2 ------------------------------------------------------------ consensus_14560#0 CCGGTTCGGGGTGCGGCCGGGCTCCGACGACGCGGCTGAGATGAGTGCTACGCTGCAGGA 1375 consensus_14560#1 ------------------------------------------------------------ consensus_14560#2 ------------------------------------------------------------ consensus_14560#0 CTGCGAGCTGCCGGCGAATAAGGGAGAGAAGAAGGCCTGCGCCACGTCGCTGGAGTCTAT 1435 consensus_14560#1 ------------------------------------------------------------ consensus_14560#2 ------------------------------------------------------------ consensus_14560#0 AGTCGACTTCGTCACATCCAGCTTTGGGGCCAGTGACGTCGACGCCGCCTCCACCGTTGT 1495 consensus_14560#1 ------------------------------------------------------------ consensus_14560#2 ------------------------------------------------------------ consensus_14560#0 GCTCAGTAAGGCGGTGGAGTCTTCTTCGCTGGCGCAGGACTACACGGTGAGCGGCGTGAG 1555 consensus_14560#1 ------------------------------------------------------------ consensus_14560#2 ------------------------------------------------------------ consensus_14560#0 GCGAATGGCCGGAACCGGCCAGCTCATCGCTTGCCATCCGGAGTCGTACCCGTACGCTGT 1615 consensus_14560#1 ------------------------------------------------------------ consensus_14560#2 ------------------------------------------------------------ consensus_14560#0 GTTCATGTGCCACCTCACAGAGGCGACGACGAGGGCGTACAAGGCCTCATTGGTCGGCAA 1675 consensus_14560#1 ------------------------------------------------------------ consensus_14560#2 ------------------------------------------------------------ consensus_14560#0 AGATGGTACTGCGGTGGAGGCGGTCGCCGTGTGCCACACCGACACGTCGGACTGGAACCC 1735 consensus_14560#1 ------------------------------------------------------------ consensus_14560#2 ------------------------------------------------------------ consensus_14560#0 AGAGCACGCTGCCTTCCATGTGCTCGGCGTCAAGCCTGGGACTGTGCCTGTCTGCCACTT 1795 consensus_14560#1 ------------------------------------------------------------ consensus_14560#2 ------------------------------------------------------------ consensus_14560#0 CATGCAGCCTGACGCTGTCGTCTGGACCCGCAGGGGCTGATGTATGTATGTATGCCATAT 1855 consensus_14560#1 ------------------------------------------------------------ consensus_14560#2 ------------------------------------------------------------ consensus_14560#0 AGTACCTACTTCATCGTACTGTACTGCGTACGCATGCTGCCAGCTGCTTTGCATACCTTG 1915 consensus_14560#1 ------------------------------------------------------------ consensus_14560#2 ------------------------------------------------------------ consensus_14560#0 CTGCTGGAGATATATAATTAATATCCAGCACTTATATACTCGTCACTTCTATCGTGTGTC 1975 consensus_14560#1 ------------------------------------------------------------ consensus_14560#2 ------------------------------------------------------------ consensus_14560#0 GAAGGTTATATACTTGTAGCATTTGGGGATGCAGTACGTACGTGTGTCTGTAATAAGTTT 2035 consensus_14560#1 ------------------------------------------------------------ consensus_14560#2 ------------------------------------------------------------ consensus_14560#0 CGTGATATGTTGCTTCATCCATATGGACCATATGTACCACCAATCCCAGTGATATATAAT 2095 consensus_14560#1 ------------------------------------------------------------ consensus_14560#2 ------------------------------------------------------------ consensus_14560#0 AATATAATATCGTTGTCTAAAAAAAGGAAAAAGA 2129 consensus_14560#1 ---------------------------------- consensus_14560#2 ---------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||