These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14566#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 432 fasta sequence [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCAGGGAGAAAAAAAACTTCCTTTTAAAAAAAGTTTCACCTTGTTTTTTCCTTGGGTTCCCTTTTAGCCCGGGGCCCCATTAAAAAGGGGGGGCGGGGTTCCTTCCAAATTTCCTTCCCAATACCCCCCCCCCTTTCAAAGCCTTCTCTTTAATCCCTTGTAAGGGCCCAGGGGCAAATTCTTTAAACCCGGCGGGACTATCCCCTTTAGGGGGGGTTAATTTTGACCTGGGGGAAATCAGGGCCAAACCGGTTCCCGGGGGAAAATTGTTTTCCCCTCACATTTCCCCCCAAAATACAACCCGGAACCTTAAAGGGAAAACCCGGGGGGGCCTAAGGGGGGACCTACCCCCCTTTATTGGGGTGGCCCCCCCTG] [+] EMBL CF310749 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCAGGGAGAAAAAAAACTTCCTTTTAAAAAAAGTTTCACCTTGTTTTTTCCTTGGGTTCCCTTTTAGCCCGGGGCCCCATTAAAAAGGGGGGGCGGGGTTCCTTCCAAATTTCCTTCCCAATACCCCCCCCCCTTTCAAAGCCTTCTCTTTAATCCCTTGTAAGGGCCCAGGGGCAAATTCTTTAAACCCGGCGGGACTATCCCCTTTAGGGGGGGTTAATTTTGACCTGGGGGAAATCAGGGCCAAACCGGTTCCCGGGGGAAAATTGTTTTCCCCTCACATTTCCCCCCAAAATACAACCCGGAACCTTAAAGGGAAAACCCGGGGGGGCCTAAGGGGGGACCTACCCCCCTTTATTGGGGTGGCCCCCCCTG] consensusID : consensus_14566#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 409 fasta sequence [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATTAAAGGAGAAATGCTTGAAAAGGCAATCCTTTTTCATTTTGTTGACCGGGGGGGGGGCCCATACTAAACAAACCTGTAAAGGGCCCGGGGGAAAAAAAAATTGGAATTGTTCCCCCCAAGGCCAAACAAAAAAAAAACCATGGGGGGGGGCCCCAAAATGCATTTTTACCCCTTCAACCCATGTAAGGGCCCAAGGGCAAATTCTTTAAAACCCGCAGGACTATCCCCTTTAAGGGGGGTTAATTTTGACCTTGGGGAAAACAGGGGCAAAACTGTTCCCTGGGGAAAATTGTTTCCCCCTCACAATTCCCCAAAAAATACAACCCGGAAACATAAAGGGTA] [+] EMBL CF298466 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATTAAAGGAGAAATGCTTGAAAAGGCAATCCTTTTTCATTTTGTTGACCGGGGGGGGGGCCCATACTAAACAAACCTGTAAAGGGCCCGGGGGAAAAAAAAATTGGAATTGTTCCCCCCAAGGCCAAACAAAAAAAAAACCATGGGGGGGGGCCCCAAAATGCATTTTTACCCCTTCAACCCATGTAAGGGCCCAAGGGCAAATTCTTTAAAACCCGCAGGACTATCCCCTTTAAGGGGGGTTAATTTTGACCTTGGGGAAAACAGGGGCAAAACTGTTCCCTGGGGAAAATTGTTTCCCCCTCACAATTCCCCAAAAAATACAACCCGGAAACATAAAGGGTA] consensusID : consensus_14566#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 407 fasta sequence [GATACGTATAACGGCATGACAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAACCCCTTCACCCCATGTCAGGGCCCAGGGGCAAATTCTTTAAACCCCGCAAAACTTCCCCCTTTAGGGGGGGTAAATTCTGACCTGGGCGAAAACAGGGAAAAACCTGTTCCCTGGGAAAAATTGTTACCCCCTCAAAATTCCACAAAAAATACAACCCGAAAACAAAAAGGGAAAACCCGGGGGGCCCTAAAGAGGGACCCACCCCACATTATTGGGGGGGCCCCCACTGCCCCTTTTCCAAGGGGAAAACCTGTCGCCCCACCTGTATAAAAAAATCCCCCACCCCCCGGGGAAAGGCGGTTTGCTTATGG] [+] EMBL CF318732 [GATACGTATAACGGCATGACAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAACCCCTTCACCCCATGTCAGGGCCCAGGGGCAAATTCTTTAAACCCCGCAAAACTTCCCCCTTTAGGGGGGGTAAATTCTGACCTGGGCGAAAACAGGGAAAAACCTGTTCCCTGGGAAAAATTGTTACCCCCTCAAAATTCCACAAAAAATACAACCCGAAAACAAAAAGGGAAAACCCGGGGGGCCCTAAAGAGGGACCCACCCCACATTATTGGGGGGGCCCCCACTGCCCCTTTTCCAAGGGGAAAACCTGTCGCCCCACCTGTATAAAAAAATCCCCCACCCCCCGGGGAAAGGCGGTTTGCTTATGG] consensusID : consensus_14566#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 401 fasta sequence [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAAA-AAAAAGGGCCCCCCCCCTTCACCCCATGTCAGGGCCCAAGGGCAAATTTTTTAAAACCCGCAGGACTACCCCCTTTAGGGGGGGTAAATTTTGACCTGGGCGAAAACAGGGCCAAACCTGTTCCCTGGGGAAAATTGTTTTCCCCTCAAAATTCCCCCCAAAATACAACCCGGAACCATAAAGGGAAAACCCGGGGGGCCCCAAGGAGGGACCCACCCCCCATTAATGGGGTGGCCCCCACTGCCCCTTTTCCAAGGGGAAAACCTGTCGGCCCCCCTGCTTTAATAAATCCCCCCCCCCCCGGGGAAAGGCGGTTTGCTTTTGGGGCCCT] [+] EMBL CF314663 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAAA AAAAAGGGCCCCCCCCCTTCACCCCATGTCAGGGCCCAAGGGCAAATTTTTTAAAACCCGCAGGACTACCCCCTTTAGGGGGGGTAAATTTTGACCTGGGCGAAAACAGGGCCAAACCTGTTCCCTGGGGAAAATTGTTTTCCCCTCAAAATTCCCCCCAAAATACAACCCGGAACCATAAAGGGAAAACCCGGGGGGCCCCAAGGAGGGACCCACCCCCCATTAATGGGGTGGCCCCCACTG ] [+] EMBL CF311039 [ TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAACCAAAATTTTCCTCCCCCTTCACCCCATGTCAGGGCCCAGGGGCAAATTCTTTAAACCCCGCGGGACTTCCCCCTTTAGGGGGGGTTAATTTTGACCTGGGGGAAATCAGGGGCAAACCTGTTCCCTGGGGAAAATTGTTTTCCCCTCAAAATTCCCCCCAAAATACAACCCGGAACCATAAAGGGTAAACCCGGGGGGCCCTAAAGAGGGACCCACCCCCCATTAATGGGGTGGCCCCCACTGCCCCTTTTCCAAGGGGAAAACCTGTCGGCCCCCCTGCTTTAATAAATCCCCCCCCCCCCGGGGAAAGGCGGTTTGCTTTTGGGGCCCT] consensusID : consensus_14566#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 389 fasta sequence [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTCCCCCTTCACCCCTTGTCAGGGCCCAAGGGCAAATTTTTTAAACCCCGCGGGACTTCCCCCTTTAGGGGGGGTAAATTTTAACCTGGGGGAAATCAGGGCCAAACCTGTTCCCTGGGAAAAATTGTAACCCCCTCACAATTCCCCCCAAATTCCAACCCGGAACCATAAAGGGAAAACCCGGGGGGCCCTAAAGAGGGACCCACCCCACATTAATGGGGTGGCCCCCACTGCCCCTTTTCCAATGGGAAAACCTGTCGGCCCACCTGCATAAAAAAATCCCCCACCCCCCGGGGAAAGGCGGTTTGCTTATGGGGCCCTT] [+] EMBL CF298776 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTCCCCCTTCACCCCTTGTCAGGGCCCAAGGGCAAATTTTTTAAACCCCGCGGGACTTCCCCCTTTAGGGGGGGTAAATTTTAACCTGGGGGAAATCAGGGCCAAACCTGTTCCCTGGGAAAAATTGTAACCCCCTCACAATTCCCCCCAAATTCCAACCCGGAACCATAAAGGGAAAACCCGGGGGGCCCTAAAGAGGGACCCACC ] [+] EMBL CF329653 [ TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAACCCCTTCACCCCATGTCAGGGCCCAAGGGCAAATTCTTTAAAACCGGCGGGACTACCCCCTTTAGGGGGGGTAAATTTTGACCTGGGCGAAATCAGGGCCAAACCTGTTCCCTGGGGAAAATGGTTACCCCCTCACAATTCCCCACAAAATACAACCCGGAACCAAAAAGGGTAAACCCGGGGGGCCCTAAGGAGGGACCCACCCCACATTAATGGGGTGGCCCCCACTGCCCCTTTTCCAATGGGAAAACCTGTCGGCCCACCTGCATAAAAAAATCCCCCACCCCCCGGGGAAAGGCGGTTTGCTTATGGGGCCCTT] consensusID : consensus_14566#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 371 fasta sequence [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAACCCCCTTAAAAAATTGAACCCCCTTCACCCCATGTCAGGGCCCAAGGGCAAATTCTTTAAAACCCGCAGGACTAACCCCTTTAGGGGGGGGAAATTCTGACCTGGGGGAAAACAGGGGCAAAACTGTTCCCTGGGGAAAAATGTTATCCCCTCAAAATTCCCCACAAAAAACAACCCGGAACCAAAAAGGGAAAACCCGGGGGGGCCCAAAGAGGGACCCAACCCACATTAATGGGGGGGCCCCCACTGCCCCCTTTCCAAGGGGAAAACCTGGCGGGCCCCCTGCATTAAAAAATCCCCCAACC] [+] EMBL CF327916 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAACCCCCTTAAAAAATTGAACCCCCTTCACCCCATGTCAGGGCCCAAGGGCAAATTCTTTAAAACCCGCAGGACTAACCCCTTTAGGGGGGGGAAATTCTGACCTGGGGGAAAACAGGGGCAAAACTGTTCCCTGGGGAAAAATGTTATCCCCTCAAAATTCCCCACAAAAAACAACCCGGAACCAAAAAGGGAAAACCCGGGGGGGCCCAAAGAGGGACCCAACCCACATTAATGGGGGGGCCCCCACTGCCCCCTTTCCAAGGGGAAAACCTGGCGGGCCCCCTGCATTAAAAAATCCCCCAACC] consensusID : consensus_14566#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 353 fasta sequence [ACGCCATGACAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCAGGGGAGGGGGAATGGGAAAAAAAAAATATCCCCCTTCACCCCTTGTCAGGGCCCAGGGGCAAATTTTTTAAACCCGGCGGGACTTCCCCTTTTAGGGGGGGTAAATTTTGACCTGGGGGAAATCAGGGCCAAACCTGTTCCCTGGGGAAAATTGTTTTCCCCTCAAAATTCCCCAAAAAATACAACCCGGAACCAAAAAGGGAAAACCCGGGGGGCCCTAAGGGGGGACCCACCCCCCTTTATTGGGGTGGCCCCCAC] [+] EMBL CF318671 [ACGCCATGACAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCAGGGGAGGGGGAATGGGAAAAAAAAAATATCCCCCTTCACCCCTTGTCAGGGCCCAGGGGCAAATTTTTTAAACCCGGCGGGACTTCCCCTTTTAGGGGGGGTAAATTTTGACCTGGGGGAAATCAGGGCCAAACCTGTTCCCTGGGGAAAATTGTTTTCCCCTCAAAATTCCCCAAAAAATACAACCCGGAACCAAAAAGGGAAAACCCGGGGGGCCCTAAGGGGGGACCCACCCCCCTTTATTGGGGTGGCCCCCAC] consensusID : consensus_14566#7 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 353 fasta sequence [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA---CCCCCTCACCCCATGTCAGGGGCCAAGGGCAAATTCTTTAAAACCCGCAGGACTACCCCCTTTAGGGGGGGGTAATTCTGACCTGGGGGAAAAAAGGGGCAAAACTGTTCCCTGGGGAAAAATGTTATCCCCTCAAAATTCCCCAAAAAATACAACCCGGAACCAAAAAGGGAAAACCCGGGGGGGCCCAAAGAGGGACCCAACCCCCATTAATTGGGGGGCCCCCACTGCCCCCTTTCCAAGGGGAAAACCTGGCGGCCCCCCTGAATTAAAAAATCCCCCCCCC] [+] EMBL CF299444 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA CCCCCTCACCCCATGTCAGGGGCCAAGGGCAAATTCTTTAAAACCCGCAGGACTAACCCCTTTAGGGGGGGTTAATTTTGACCTGGGGGAAAAAAGGGGCAAAACTGTTCCCTGGGGAAAATTGTTTTCCCCTCAAAATTCCCCAAAAAATACAACCCGGAACCAAAAAGGGTAAACCCGGGGGGGCCCAAAGAGGGACCCAACCCCCATTAATTGCGGGGCCCCCACTG ] [+] EMBL CF318708 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA CCCCCTCACCCCAT TCAGGGGCCAAGGGCAAATTCTTTAAAACCCGCAGGACTACCCCCTTTAGGGGGGGGAAATTCTGACCTGGGGGAAAAAAGGGGCAAAACTGTTCCCTGGGGAAAAATGTTACCCCCTCAAAATTCCACAAAAAAAACAACCCGGAAACAAAAAGGGAAAACCCGGGGGGGCCCAAAGAGGGACCCACCCCCCATTAATGGGGGGGCCCCCACTG ] [+] EMBL CF330886 [ TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACCCCCCCCTCACCCCATGGCAGGGCCCAAGGGCAAATTCTTTAAAACCCGCAGGACTACCCCCTTTAGGGGGGGGTAATTCTGACCTGGGGGAAAAAAGGGGCAAAACTGTTCCCTGGGGAAAAATGTTATCCCCTCAAAATTCCCCACAAAATACAACCCGGAACCATAAAGGGAAAACCCGGGGGGCCCCAAAGAGGGACCCAACCCACATTAATTGGGGGGCCCCCACTGCCCCCTTTCCAAGGGGAAAACCTGGCGGCCCCCCTGAATTAAAAAATCCCCCCCCC] consensusID : consensus_14566#8 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 350 fasta sequence [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGGAAAAGGGTTAATTAACATAGGGGCCCCCCAAAAAATAACAAAAAAAATTTTTACCCCTTCAACCCATGTCAGGGCCCAAGGGCAAATTCTTTTAAACCCGCAGGACTAACCCCTTTAAGGGGGGGTAATTTTGACCTTGGGGAAAACAGGGGCAAAACTGTTCCCTGGGGAAAAATGTTATCCCCTCAAAATTCCCCCCAAAATACAACCCGGAAACAAAAAGGGTAAACCCCGGGGGGCCCAAAGAGGGGCCCACCCCCCATTAATTGGGTTGCCCCCACTG] [+] EMBL CF310378 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGGAAAAGGGTTAATTAACATAGGGGCCCCCCAAAAAATAACAAAAAAAATTTTTACCCCTTCAACCCATGTCAGGGCCCAAGGGCAAATTCTTTTAAACCCGCAGGACTAACCCCTTTAAGGGGGGGTAATTTTGACCTTGGGGAAAACAGGGGCAAAACTGTTCCCTGGGGAAAAATGTTATCCCCTCAAAATTCCCCCCAAAATACAACCCGGAAACAAAAAGGGTAAACCCCGGGGGGCCCAAAGAGGGGCCCACCCCCCATTAATTGGGTTGCCCCCACTG] consensusID : consensus_14566#9 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 338 fasta sequence [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCAAAAAAAACCCAAGGGGCCAATTTTGTTTTTAAAATTTGGGGGTTGGCCTACAAAACTTTACTCTTTAAACCCTTGTAAGGGCCCAGGGGCAATTTCTTTAAACCCTGCGGGACTATCCCCTTTAGGGGGGGTTAATTTTGACCTGGGGGAAATCAGGGCCATACCTGTTCCCTGGGGAAAATTGTTTTCCCCTCAAAATTCCCCACAAATTACAACCCGGAACCTTAAAGGGTAAACCCGGGGGGCCCTAAGGAGGGACCTAC] [+] EMBL CF328251 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCAAAAAAAACCCAAGGGGCCAATTTTGTTTTTAAAATTTGGGGGTTGGCCTACAAAACTTTACTCTTTAAACCCTTGTAAGGGCCCAGGGGCAATTTCTTTAAACCCTGCGGGACTATCCCCTTTAGGGGGGGTTAATTTTGACCTGGGGGAAATCAGGGCCATACCTGTTCCCTGGGGAAAATTGTTTTCCCCTCAAAATTCCCCACAAATTACAACCCGGAACCTTAAAGGGTAAACCCGGGGGGCCCTAAGGAGGGACCTAC] consensusID : consensus_14566#10 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 333 fasta sequence [TCGCTACGTAACGGCATGACCGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAACCCCTTCACCCCATTTCAGGGCCCAAGGGCAAATTCTTTAAACCCCGCAGAACTACCCCCTTTAAGGAGGGTAAATTCTAACCTTGGCGAAAAAATGGCCAAACCTGTTCCCTGGGAAAAATTGTTTCCCCCTCAAAATTCCCCAAAAAATACAACCCGGAACCATAAAGGGAAAACCCGGGGGGCCCTAAGGAGGGACCCACCCCCCTTTAATTGGGTGGCCCCCACTG] [+] EMBL CF314894 [TCGCTACGTAACGGCATGACCGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAACCCCTTCACCCCATTTCAGGGCCCAAGGGCAAATTCTTTAAACCCCGCAGAACTACCCCCTTTAAGGAGGGTAAATTCTAACCTTGGCGAAAAAATGGCCAAACCTGTTCCCTGGGAAAAATTGTTTCCCCCTCAAAATTCCCCAAAAAATACAACCCGGAACCATAAAGGGAAAACCCGGGGGGCCCTAAGGAGGGACCCACCCCCCTTTAATTGGGTGGCCCCCACTG] consensusID : consensus_14566#11 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 311 fasta sequence [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGACAACAAAATTAAATTTTTACCCCTTCAACCCATGTCAAGGGCCAAGGGCAAATTTTTTTAAACCCGCAGGACTTTCCCCTTTAAGGGGGGGTAATTTTGAACTTGGGGTAAACAGGGGCAAAACTGTTTCCTGGGGAAAAATGTTATCCCCTCAAAATTCCCCACAAAATACAACCCGGAAACATAAAGGGTAAACCCCGGGGGGCCTAATGAGGGACCCAACCCCCATTAATTGGGTTGCCCCCACTG] [+] EMBL CF334155 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGACAACAAAATTAAATTTTTACCCCTTCAACCCATGTCAAGGGCCAAGGGCAAATTTTTTTAAACCCGCAGGACTTTCCCCTTTAAGGGGGGGTAATTTTGAACTTGGGGTAAACAGGGGCAAAACTGTTTCCTGGGGAAAAATGTTATCCCCTCAAAATTCCCCACAAAATACAACCCGGAAACATAAAGGGTAAACCCCGGGGGGCCTAATGAGGGACCCAACCCCCATTAATTGGGTTGCCCCCACTG] consensusID : consensus_14566#12 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 306 fasta sequence [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCAAACTTTTTTTTTCCCCCTTCACCCCATGTAAGGGCCCAAGGGCAAATTCTTTAAACCCCGCAGGACTACCCCCTTTAGGGGGGGTAAATTTTGACCTGGGGGAAAACAGGGCCAAACCTGTTCCCTGGGGAAAATTGTTACCCCCTCAAAATTCCCCACAAAATACAACCCGGAACCAAAAAGGGAAAACCCGGGGGGCCCTAAGGAGGGACCCACCCCCCATTAATGGGGTGGCCCCCAC] [+] EMBL CF317082 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCAAACTTTTTTTTTCCCCCTTCACCCCATGTAAGGGCCCAAGGGCAAATTCTTTAAACCCCGCAGGACTACCCCCTTTAGGGGGGGTAAATTTTGACCTGGGGGAAAACAGGGCCAAACCTGTTCCCTGGGGAAAATTGTTACCCCCTCAAAATTCCCCACAAAATACAACCCGGAACCAAAAAGGGAAAACCCGGGGGGCCCTAAGGAGGGACCCACCCCCCATTAATGGGGTGGCCCCCAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14566#5 ------------------------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 36 consensus_14566#7 ------------------------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 36 consensus_14566#3 ------------------------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 36 consensus_14566#4 ------------------------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 36 consensus_14566#2 GATACGTATAACGGCATGACAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 60 consensus_14566#12 ----------------------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 38 consensus_14566#10 TCGCTACGTAACGGCATGACCGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 60 consensus_14566#8 --------------------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 40 consensus_14566#11 -------------------------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 35 consensus_14566#6 ----------ACGCCATGACAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 50 consensus_14566#0 ------------------------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 36 consensus_14566#1 ---------------------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 39 consensus_14566#9 ----------------------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTT 38 ******************************* *** consensus_14566#5 TTTTTTTTTTTTTTTTTTTTTTTAAAAAAA--------CCCCCTTAAAA----------- 77 consensus_14566#7 TTTTTTTTTTTTTTTTTTTTTTT----------------TTTTTTAA------------- 67 consensus_14566#3 TTTTTTTTTTTTTTTTTTTTTTTT--------------TTTTTTCAAAA----------- 71 consensus_14566#4 TTTTTTTTTTTTTTTTTTTTTTTT--------------TTTTTTT--------------- 67 consensus_14566#2 TTTTTTTTTTTTTTTTTTTTTTTTTT------------TTTTTTCAA------------- 95 consensus_14566#12 TTTTTTTTTTTTTTTTTTTTTTTTCCAAAC--------TTTTTTTTT------------- 77 consensus_14566#10 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT--------TTTTTTTTT------------- 99 consensus_14566#8 TTTTTTTTTTTTTTTTTTTTTTTAGGGAAAAGG-----GTTAATTAACATAGGGGCCCCC 95 consensus_14566#11 TTTTTTTTTTTTTTTTTTTTTTTAGGA-----------------CAACA----------- 67 consensus_14566#6 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT-----TTTTTTTTTCCAGGGGAG---- 101 consensus_14566#0 TTTTTTTTTTTTTTTTTTTTTCCAGGGAGAAAAAAAACTTCCTTTTAAAAAAAGTTTCAC 96 consensus_14566#1 TTTTTTTTTTTTTTTTTTTTTTTTAAATTAAAGGAGAAATGCTTGAAAAGGCAATCCTTT 99 consensus_14566#9 TTTTTTTTTTTTTTTTTTTTTTTTTTTTT----------TTTTCCCAAAAAAAACCCAA- 87 ********************* consensus_14566#5 ------------------------------------------------------------ consensus_14566#7 ------------------------------------------------------------ consensus_14566#3 ------------------------------------------------------------ consensus_14566#4 ------------------------------------------------------------ consensus_14566#2 ------------------------------------------------------------ consensus_14566#12 ------------------------------------------------------------ consensus_14566#10 ------------------------------------------------------------ consensus_14566#8 ------------------------------------------------------------ consensus_14566#11 ------------------------------------------------------------ consensus_14566#6 ------------------------------------------------------------ consensus_14566#0 CTTGTTTTTTCCTT-------GGGTTCCCTTTTAG-----CCCG---GGGCCCCATTAAA 141 consensus_14566#1 TTCATTTTGTTGACCGGGGGGGGGGCCCATACTAAACAAACCTGTAAAGGGCCCGGGGGA 159 consensus_14566#9 ------------------------------------------------GGG--------- 90 consensus_14566#5 ------------------------------------------------------------ consensus_14566#7 ------------------------------------------------------------ consensus_14566#3 ------------------------------------------------------------ consensus_14566#4 ------------------------------------------------------------ consensus_14566#2 ------------------------------------------------------------ consensus_14566#12 ------------------------------------------------------------ consensus_14566#10 ------------------------------------------------------------ consensus_14566#8 ---------------------------------------------------CAAAAAATA 104 consensus_14566#11 ------------------------------------------------------------ consensus_14566#6 ----------------------------------------------------GGGGAATG 109 consensus_14566#0 AAGGGGGGGCGGG---GTTCCTTCCAAATTTCCTTCCCAATACCCCCCCC--------CC 190 consensus_14566#1 AAAAAAAATTGGAATTGTTCCCCCCAAGGCCAAACAAAAAAAAAACCATGGGGGGGGGCC 219 consensus_14566#9 ----------------------GCCAATTTTGTTTTTAAAA------TTTGGGGGTTGGC 122 consensus_14566#5 A----ATTG----AACCCCCTTCACCCCATGTCAGGGCCCAAGGGCAAATTCTTTAAAAC 129 consensus_14566#7 ----------------CCCCCTCACCCCATGTCAGGGGCCAAGGGCAAATTCTTTAAAAC 111 consensus_14566#3 A----AAAGGGCCCCCCCCCTTCACCCCATGTCAGGGCCCAAGGGCAAATTTTTTAAAAC 127 consensus_14566#4 -------------CTCCCCCTTCACCCCTTGTCAGGGCCCAAGGGCAAATTTTTTAAACC 114 consensus_14566#2 ----------------CCCCTTCACCCCATGTCAGGGCCCAGGGGCAAATTCTTTAAACC 139 consensus_14566#12 ---------------CCCCCTTCACCCCATGTAAGGGCCCAAGGGCAAATTCTTTAAACC 122 consensus_14566#10 ------------TCAACCCCTTCACCCCATTTCAGGGCCCAAGGGCAAATTCTTTAAACC 147 consensus_14566#8 ACAAAAAAAATTTTTACCCCTTCAACCCATGTCAGGGCCCAAGGGCAAATTCTTTTAAAC 164 consensus_14566#11 --AAATTAAATTTTTACCCCTTCAACCCATGTCAAGGGCCAAGGGCAAATTTTTTTAAAC 125 consensus_14566#6 GGAAAAAAAAAATATCCCCCTTCACCCCTTGTCAGGGCCCAGGGGCAAATTTTTTAAACC 169 consensus_14566#0 TTTCAAAGCCTTCT----CTTTAATCCCTTGTAAGGGCCCAGGGGCAAATTCTTTAAACC 246 consensus_14566#1 CCAAAATGCATTTTTACCCCTTCAACCCATGTAAGGGCCCAAGGGCAAATTCTTTAAAAC 279 consensus_14566#9 CTACAAAACTTTACT---CTTTAAACCCTTGTAAGGGCCCAGGGGCAATTTCTTTAAACC 179 * * * *** * * * ** *** ****** ** *** ** * consensus_14566#5 CCGCAGGACTAACCCCTTTAGGGGGGGGAAATTCTGACCTGGGGGAAAACAGGGGCAAAA 189 consensus_14566#7 CCGCAGGACTACCCCCTTTAGGGGGGGGTAATTCTGACCTGGGGGAAAAAAGGGGCAAAA 171 consensus_14566#3 CCGCAGGACTACCCCCTTTAGGGGGGGTAAATTTTGACCTGGGCGAAAACAGGGCCAAAC 187 consensus_14566#4 CCGCGGGACTTCCCCCTTTAGGGGGGGTAAATTTTAACCTGGGGGAAATCAGGGCCAAAC 174 consensus_14566#2 CCGCAAAACTTCCCCCTTTAGGGGGGGTAAATTCTGACCTGGGCGAAAACAGGGAAAAAC 199 consensus_14566#12 CCGCAGGACTACCCCCTTTAGGGGGGGTAAATTTTGACCTGGGGGAAAACAGGGCCAAAC 182 consensus_14566#10 CCGCAGAACTACCCCCTTTAAGGAGGGTAAATTCTAACCTTGGCGAAAAAATGGCCAAAC 207 consensus_14566#8 CCGCAGGACTAACCCCTTTAAGGGGGGGTAATTTTGACCTTGGGGAAAACAGGGGCAAAA 224 consensus_14566#11 CCGCAGGACTTTCCCCTTTAAGGGGGGGTAATTTTGAACTTGGGGTAAACAGGGGCAAAA 185 consensus_14566#6 CGGCGGGACTTCCCCTTTTAGGGGGGGTAAATTTTGACCTGGGGGAAATCAGGGCCAAAC 229 consensus_14566#0 CGGCGGGACTATCCCCTTTAGGGGGGGTTAATTTTGACCTGGGGGAAATCAGGGCCAAAC 306 consensus_14566#1 CCGCAGGACTATCCCCTTTAAGGGGGGTTAATTTTGACCTTGGGGAAAACAGGGGCAAAA 339 consensus_14566#9 CTGCGGGACTATCCCCTTTAGGGGGGGTTAATTTTGACCTGGGGGAAATCAGGGCCATAC 239 * ** *** *** **** ** *** **** * * ** ** * ** * ** * * consensus_14566#5 CTGTTCCCTGGGGAAAAATGTTATCCCCTCAAAATTCCCCACAAAAAACAACCCGGAACC 249 consensus_14566#7 CTGTTCCCTGGGGAAAAATGTTATCCCCTCAAAATTCCCCAAAAAATACAACCCGGAACC 231 consensus_14566#3 CTGTTCCCTGGGGAAAATTGTTTTCCCCTCAAAATTCCCCCCAAAATACAACCCGGAACC 247 consensus_14566#4 CTGTTCCCTGGGAAAAATTGTAACCCCCTCACAATTCCCCCCAAATTCCAACCCGGAACC 234 consensus_14566#2 CTGTTCCCTGGGAAAAATTGTTACCCCCTCAAAATTCCACAAAAAATACAACCCGAAAAC 259 consensus_14566#12 CTGTTCCCTGGGGAAAATTGTTACCCCCTCAAAATTCCCCACAAAATACAACCCGGAACC 242 consensus_14566#10 CTGTTCCCTGGGAAAAATTGTTTCCCCCTCAAAATTCCCCAAAAAATACAACCCGGAACC 267 consensus_14566#8 CTGTTCCCTGGGGAAAAATGTTATCCCCTCAAAATTCCCCCCAAAATACAACCCGGAAAC 284 consensus_14566#11 CTGTTTCCTGGGGAAAAATGTTATCCCCTCAAAATTCCCCACAAAATACAACCCGGAAAC 245 consensus_14566#6 CTGTTCCCTGGGGAAAATTGTTTTCCCCTCAAAATTCCCCAAAAAATACAACCCGGAACC 289 consensus_14566#0 CGGTTCCCGGGGGAAAATTGTTTTCCCCTCACATTTCCCCCCAAAATACAACCCGGAACC 366 consensus_14566#1 CTGTTCCCTGGGGAAAATTGTTTCCCCCTCACAATTCCCCAAAAAATACAACCCGGAAAC 399 consensus_14566#9 CTGTTCCCTGGGGAAAATTGTTTTCCCCTCAAAATTCCCCACAAATTACAACCCGGAACC 299 * *** ** *** **** *** ******* * **** * *** ******* ** * consensus_14566#5 AAAAAGGGAAAACCCGGGGGGGCCCAAAGAGGGACCCAACCCACATTAATGGGGGGGCCC 309 consensus_14566#7 AAAAAGGGAAAACCCGGGGGGGCCCAAAGAGGGACCCAACCCCCATTAATTGGGGGGCCC 291 consensus_14566#3 ATAAAGGGAAAACCCGGGGGGCCCCAAGGAGGGACCCACCCCCCATTAATGGGGTGGCCC 307 consensus_14566#4 ATAAAGGGAAAACCCGGGGGGCCCTAAAGAGGGACCCACCCCACATTAATGGGGTGGCCC 294 consensus_14566#2 AAAAAGGGAAAACCCGGGGGGCCCTAAAGAGGGACCCACCCCACATTATTGGGGGGGCCC 319 consensus_14566#12 AAAAAGGGAAAACCCGGGGGGCCCTAAGGAGGGACCCACCCCCCATTAATGGGGTGGCCC 302 consensus_14566#10 ATAAAGGGAAAACCCGGGGGGCCCTAAGGAGGGACCCACCCCCCTTTAATTGGGTGGCCC 327 consensus_14566#8 AAAAAGGGTAAACCCCGGGGGGCCCAAAGAGGGGCCCACCCCCCATTAATTGGGTTGCCC 344 consensus_14566#11 ATAAAGGGTAAACCCCGGGGGGCCTAATGAGGGACCCAACCCCCATTAATTGGGTTGCCC 305 consensus_14566#6 AAAAAGGGAAAACCCGGGGGGCCCTAAGGGGGGACCCACCCCCCTTTATTGGGGTGGCCC 349 consensus_14566#0 TTAAAGGGAAAACCCGGGGGGGCCTAAGGGGGGACCTACCCCCCTTTATTGGGGTGGCCC 426 consensus_14566#1 ATAAAGGGTA-------------------------------------------------- 409 consensus_14566#9 TTAAAGGGTAAACCCGGGGGGCCCTAAGGAGGGACCTAC--------------------- 338 ****** * consensus_14566#5 CCACTGCCCCCTTTCCAAGGGGAAAACCTGGCGGGCCCCCTGCATTAAAAAATCCCCCAA 369 consensus_14566#7 CCACTGCCCCCTTTCCAAGGGGAAAACCTGGCGGCCCCCCTGAATTAAAAAATCCCCCCC 351 consensus_14566#3 CCACTGCCCCTTTTCCAAGGGGAAAACCTGTCGGCCCCCCTGCTTTAATAAATCCCCCCC 367 consensus_14566#4 CCACTGCCCCTTTTCCAATGGGAAAACCTGTCGGCCCACCTGCATAAAAAAATCCCCCAC 354 consensus_14566#2 CCACTGCCCCTTTTCCAAGGGGAAAACCTGTCGCCCCACCTGTATAAAAAAATCCCCCAC 379 consensus_14566#12 CCAC-------------------------------------------------------- 306 consensus_14566#10 CCACTG------------------------------------------------------ 333 consensus_14566#8 CCACTG------------------------------------------------------ 350 consensus_14566#11 CCACTG------------------------------------------------------ 311 consensus_14566#6 CCAC-------------------------------------------------------- 353 consensus_14566#0 CCCCTG------------------------------------------------------ 432 consensus_14566#1 ------------------------------------------------------------ consensus_14566#9 ------------------------------------------------------------ consensus_14566#5 CC--------------------------------- 371 consensus_14566#7 CC--------------------------------- 353 consensus_14566#3 CCCCCGGGGAAAGGCGGTTTGCTTTTGGGGCCCT- 401 consensus_14566#4 CCCCCGGGGAAAGGCGGTTTGCTTATGGGGCCCTT 389 consensus_14566#2 CCCCCGGGGAAAGGCGGTTTGCTTATGG------- 407 consensus_14566#12 ----------------------------------- consensus_14566#10 ----------------------------------- consensus_14566#8 ----------------------------------- consensus_14566#11 ----------------------------------- consensus_14566#6 ----------------------------------- consensus_14566#0 ----------------------------------- consensus_14566#1 ----------------------------------- consensus_14566#9 ----------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||