These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14581#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1912 fasta sequence [AACCCGGCGCTGCGGCTCCACACTTCTCAGCCCGCCCGCTCCTCCTCCTCCCCGGCGCTGCGGCTACACAACGCAACGGCTTCCCGGCGGCACAGCGGCGAGGAGGAGGTCCGGCAAGGAGATAGAAAGGAGAAGTGCTCAAAATGGGGGCCCTTTTGAGCTCCCCCAACAGCAAGAACCAGCCATGGGAGCATGGTGAAGCTTCAAAGGCAGATTCCTCCAAGAAGCTGCGGATGTCGGCGCCGCCTCTGTCCGGTGGCTACGACCACCCCGGGCTGATCCCGGGGCTCCCGGATGAGATCTCGCTGCAGATCCTCGCAAGGATGCCCCGGATGGGTTATCTGAATGCAAAGATGGTTTCGAGGAGCTGGAAGGCTGCGATCACTGGCGTGGAGCTGTACCGGGTGAGGAAGGAGCTGGGTGTGAGTGAGGAATGGCTGTACATGCTTACCAAGTCAGATGATGGGAAGCTAGTGTGGAATGCATTCGATCCGGTTTGTGGCCAATGGCAGAGGCTGCCACTGATGCCGGGGATCAGCCATGGAGGAGAATGCAAGAGGGGCATCCCTGGGTTGTGGTTAGGGGATTTGTTGAGCGCCGGCATCAGGGTCTCTGATGTTATTAGAGGCTGGCTTGGCCAAAGGGATTCATTGGATAGGCTTCCGTTCTGCGGTTGTGCAATTGGGACAGTCAACGGGTGCATCTATGTTTTAGGTGGATTCTCTAGAGGCTCGGCGATGAAATGTGTATGGAGGTATGATCCTTTTGTCAATGCGTGGCAGGAGGTTAGCTCGATGAGCACCGGGCGCGCATTCTGCAAGGCTAGCCTGCTGAACAACAAGCTGTATGTTGTTGGTGGTGTCAGCAAAGGCAAGAACGGGTTAGCTCCGCTCCAATCCGCCGAGGTGTTTGACCCAAGGACAGGAATTTGGGTGGAGGTGCCTGACATCCCGTTCTCGAAAGCGCAAGCTCTACCAACTGCCTTCTTGGCTGAGCTGCTGAAGCCCATTGCGACAGGAATGACCTCATTTGGAGGCAAGCTTTATGTTCCTCAAAGTCTGTATTCCTGGCCATTCTTTGTTGATGTTGGT-GGGGAGATCTTTGATCCGGAGACAAATTCATGGGCGGAAATGCCTGTAGGAATGGGCGAGGGCTGGCCAGCGAGGCAGGCTGGTACGAAGTTAAGTGCTGTCATAGATGGGGACTTGTATGCTTTGGAGCCATCAACTTCTTCTGATAGAGGTAAGATCAAGATTTATGATCCTCAGGAGGATGCTTGGAAGGTTGCCATTGGCCAGGTACCAGTGGGTGACTTTGCAGAGTCGGAATGTCCATACTTACTTGCAGGATTTCTTGGCAAGCTCA-ATTTGATCATCA-AAGATGTAGATAGCA-AGATCAATATAATGCA-AA-CCGATGTTCTGAAG-CCTGTGGAG-TTGTCAGCCCC-TGGAAATGGT-CCAACATGCCAAAATCAACAACTTTCTTCAGAACAGGAAACTAATTTGTGGAAAGTCATCGTGTCGAAAAATCTTGCAGCCGCTGAATTAGTCAGTTGTCAGGTGCTCAACATATAACTTGTTATGTGTTT-ACTTTTGTTGAGTAGATGTGCTTCTACCAACATCTGATCAAGTCA-ACGGTAGAG-GCTATC-ACCTTAAGTGAAAATGATCATTATCTGTGTATGGTTTGG--ATGTGAGTAATGAGCTGCAGAAATCAATTCA-AACGGCAATGTACATATTTATATGTAATCTGTGTGTAATTCAACTCTGT-AATACATCACATAAGATAGAGAAAA-CCATGCT-GGTTTCTTCAGTTCTCAAGACAACAGTGCTATCTCCATCAGCACTGCCAAATATATTAACCTTTTTCATTGTCATTCCNTTGGTAAGCTCAGCATTTTNTTTCCCCAAAAAAAAAA] [+] EMBL C28831 [AACCCGGCGCTGCGGCTCCACACTTCTCAGCCCGCCCGCTCCTCCTCCTCCCCGGCGCTGCGGCTACACAACGCAACGGCTTCCCGGCGGCACAGCGGCGAGGAGGAGGTCCGGCAAGGAGATAGAAAGGAGAAGTGCTCAAAATGGGGGCCCTTTTGAGCTCCCCCAACAGCAAGAACCAGCCATGGGAGCATGGTGAAGCTTCAAAGGCAGATTCCTCCAAGAAGCTGCGGATGTTGGCGCCGCCTCTGTCCGGTGGCTACGACCACCCCGGGCTGATCCCGGGGCTC ] [+] EMBL AK111523 [ GCGGCTCCACACTTCTCAGCCCGCCCGCTCCTCCTCCTCCCCGGCGCTGCGGCTACACAACGCAACGGCTTCCCGGCGGCACAGCGGCGAGGAGGAGGTCCGGCAAGGAGATAGAAAGGAGAAGTGCTCAAAATGGGGGCCCTTTTGAGCTCCCCCAACAGCAAGAACCAGCCATGGGAGCATGGTGAAGCTTCAAAGGCAGATTCCTCCAAGAAGCTGCGGATGTCGGCGCCGCCTCTGTCCGGTGGCTACGACCACCCCGGGCTGATCCCGGGGCTCCCGGATGAGATCTCGCTGCAGATCCTCGCAAGGATGCCCCGGATGGGTTATCTGAATGCAAAGATGGTTTCGAGGAGCTGGAAGGCTGCGATCACTGGCGTGGAGCTGTACCGGGTGAGGAAGGAGCTGGGTGTGAGTGAGGAATGGCTGTACATGCTTACCAAGTCAGATGATGGGAAGCTAGTGTGGAATGCATTCGATCCGGTTTGTGGCCAATGGCAGAGGCTGCCACTGATGCCGGGGATCAGCCATGGAGGAGAATGCAAGAGGGGCATCCCTGGGTTGTGGTTAGGGGATTTGTTGAGCGCCGGCATCAGGGTCTCTGATGTTATTAGAGGCTGGCTTGGCCAAAGGGATTCATTGGATAGGCTTCCGTTCTGCGGTTGTGCAATTGGGACAGTCAACGGGTGCATCTATGTTTTAGGTGGATTCTCTAGAGGCTCGGCGATGAAATGTGTATGGAGGTATGATCCTTTTGTCAATGCGTGGCAGGAGGTTAGCTCGATGAGCACCGGGCGCGCATTCTGCAAGGCTAGCCTGCTGAACAACAAGCTGTATGTTGTTGGTGGTGTCAGCAAAGGCAAGAACGGGTTAGCTCCGCTCCAATCCGCCGAGGTGTTTGACCCAAGGACAGGAATTTGGGTGGAGGTGCCTGACATCCCGTTCTCGAAAGCGCAAGCTCTACCAACTGCCTTCTTGGCTGAGCTGCTGAAGCCCATTGCGACAGGAATGACCTCATTTGGAGGCAAGCTTTATGTTCCTCAAAGTCTGTATTCCTGGCCATTCTTTGTTGATGTTGGT GGGGAGATCTTTGATCCGGAGACAAATTCATGGGCGGAAATGCCTGTAGGAATGGGCGAGGGCTGGCCAGCGAGGCAGGCTGGTACGAAGTTAAGTGCTGTCATAGATGGGGACTTGTATGCTTTGGAGCCATCAACTTCTTCTGATAGAGGTAAGATCAAGATTTATGATCCTCAGGAGGATGCTTGGAAGGTTGCCATTGGCCAGGTACCAGTGGGTGACTTTGCAGAGTCGGAATGTCCATACTTACTTGCAGGATTTCTTGGCAAGCTCA ATTTGATCATCA AAGATGTAGATAGCA AGATCAATATAATGCA AA CCGATGTTCTGAAG CCTGTGGAG TTGTCAGCCCC TGGAAATGGT CCAACATGCCAAAATCAACAACTTTCTTCAGAACAGGAAACTAATTTGTGGAAAGTCATCGTGTCGAAAAATCTTGCAGCCGCTGAATTAGTCAGTTGTCAGGTGCTCAACATATAACTTGTTATGTGTTT ACTTTTGTTGAGTAGATGTGCTTCTACCAACATCTGATCAAGTCA ACGGTAGAG GCTATC ACCTTAAGTGAAAATGATCATTATCTGTGTATGGTTTGG ATGTGAGTAATGAGCTGCAGAAATCAATTCA AACGGCAATGTACATATTTATATGTAATCTGTGTGTAATTCAACTCTGT AATACATCACATAAGATAGAGAAAA CCATGC ] [+] EMBL CB642004 [ CGGCTCCACACTTCTCAGCCCGCCCGCTCCTCCTCCTCCCCGGCGCTGCGGCTACACAACGCAACGGCTTCCCGGCGGCACAGCGGCGAGGAGGAGGTCCGGCAAGGAGATAGAAAGGAGAAGTGCTCAAAATGGGGGCCCTTTTGAGCTCCCCCAACAGCAAGAACCAGCCATGGGAGCATGGTGAAGCTTCAAAGGCAGATTCCTCCAAGAAGCTGCGGATGTCGGCGCCGCCTCTGTCCGGTGGCTACGACCACCCCGGGCTGATCCCGGGGCTCCCGGATGAGATCTCGCTGCAGATCCTCGCAAGGATGCCCCGGATGGGTTATCTGAATGCAAAGATGGTTTCGAGGAGCTGGAAGGCTGCGATCACTGGCGTGGAGCTGTACCGGGTGAGGAAGGAGCTGGGTGTGAGTGAGGAATGGCTGTACATGCTTACCAAGTCAGATGATGGGAAGCTAGTGTGGAATGCATTCGATCCGGTTTGTGGCCAATGGCAGAGGCTGCCACTGATGCCGGGGATCAGCCATGGAGGAGAATGCAAGAGGGGCATCCCTGGGTTGTGGTTAGGGGATTTGTTGAGCGCCGGCATCAGGGTCTCTGATGTTATTAGAGGCTGGCTTGGCCAAAGGGATTCATTGGATAGGCTTCCGTTCTGCGGTTGTGCAATTGGGACAGTCAACGGGTGCATCTATGTTTTAGGTGGATTCTCTAGAGGCTCGGCGATGAAATGTGTATGGAGGTATGATCCTTTTGTCAATGCGTGGCAGGAGGTTAGCTCGATGAGCACCGGGCG ] [+] EMBL CB657260 [ CAGCCCGCCCGCTCCTCCTCCTCCCCGGCGCTGCGGCTACACAACGCAACGGCTTCCCGGCGGCACAGCGGCGAGGAGGAGGTCCGGCAAGGAGATAGAAAGGAGAAGTGCTCAAAATGGGGGCCCTTTTGAGCTCCCCCAACAGCAAGAACCAGCCATGGGAGCATGGTGAAGCTTCAAAGGCAGATTCCTCCAAGAAGCTGCGGATGTCGGCGCCGCCTCTGTCCGGTGGCTACGACCACCCCGGGCTGATCCCGGGGCTCCCGGATGAGATCTCGCTGCAGATCCTCGCAAGGATGCCCCGGATGGGTTATCTGAATGCAAAGATGGTTTCGAGGAGCTGGAAGGCTGCGATCACTGGCGTGGAGCTGTACCGGGTGAGGAAGGAGCTGGGTGTGAGTGAGGAATGGCTGTACATGCTTACCAAGTCAGATGATGGGAAGCTAGTGTGGAATGCATTCGATCCGGTTTGTGGCCAATGGCAGAGGCTGCCACTGATGCCGGGGATCAGCCATGGAGGAGAATGCAAGAGGGGCATCCCTGGGTTGTGGTTAGGGGATTTGTTGAGCGCCGGCATCAGGGTCTCTGATGTTATTAGAGGCTGGCTTGGCCAAAGGGATTCATTGGATAGGCTTCCGTTCTGCGGTTGTGCAATTGGGACAGTCAACGGGTGCATCTATGTTTTAGGTGGATTCTCTAGAGGCTCGGCGATGAAATGTGTATGGAGGTATGATCCTTTTGTCAATGCGTGGCAGGAGGTTAGCTCGATGAGCACCGGGCG ] [+] EMBL CB618112 [ CCGCCCCCTCCTCCTCCTCCCCGGCGCTGCGGCTCCACAACGCAACGGCTTCCCGGCGGCACAGAGGCGAGGAGGAGGTCCGGCAAGGAGATAGAAAGGAGAAGTGCTCAAAATGGGGGCCCTTTTGAGCTCCCCCAACAGCAAGAACCAGCCATGGGAGCATGGTGAAGCTTCAAAGGCAGATTCCTCCAAGAAGCTGCGGATGTCGGCGCCGCCTCTGTCCGGTGGCTACGACCACCCCGGGCTGATCCCGGGGCTCCCGGATGAGATCTCGCTGCAGATCCTCGCAAGGATGCCCCGGATGGGTTATCTGAATGCAAAGATGGTTTCGAGGAGCTGGAAGGCTGCGATCACTGGCGTGGAGCTGTACCGGGTGAGGAAGGAGCTGGGTGTGAGTGAGGAATGGCTGTACATGCTTACCAAGTCAGATGATGGGAAGCTAGTGTGGAATGCATTCGATCCGGTTTGTGGCCAATGGCAGAGGCTGCCACTGATGCCGGGGATCAGCCATGGAGGAGAATGCAAGAGGGGCATCCCTGGGTTGTGGTTAGGGGATTTGTTGAGCGCCGGCATCAGGGTCTCTGATGTTATTAGAGGCTGGCTTGGCCAAAGGGATTCATTGGATAGGCTTCCGTTCTGCGGTTGTGCAATTGGGACAGTCGACGGGTGCATCTATGTTTTAGGTGGATTCTCTAGAGGCTCGGCGATGAAATGTGTATGGAGGTATGATCCTTTTATCAATGCGTGGCAGGAGGTTAGCTCGATGAGCACCGGGCGCGC ] [+] EMBL CF323828 [ GCAAGGCTAGCCTGCTGAACAACAAGCTGTATGTTGTTGGTGGTGTCAGCAAAGGCAAGAACGGGTTAGCTCCGCTCCAATCCGCCGAGGTGTTTGACCCAAGGACAGGAATTTGGGTGGAGGTGCCTGACATCCCGTTCTCGAAAGCGCAAGCTCTACCAACTGCCTTCTTGGCTGAGCTGCTGAAGCCCATTGCGACAGGAATGACCTCATTTGGAGGCAAGCTTTATGTTCCTCAAAGTCTGTATTCCTGGCCATTCTTTGTTGATGTTGGTGGGGGAGATCTTTGATCCGGAGACAAATTCATGGGCGGAAATGCCTGTAGGAATGGGCGAGGGCTGGCCAGCGAGGCAGGCTGGTACGAAGTTAAGTGCTGTCATAGATGGGGACTTGTATGCTTTGGAGCCATCAACTTCTTCTGATAGAGGTAAGATCAAGATTTATGATCCTCAGGAG ] [+] EMBL AA752937 [ TGGCTGAGCTGCTGAAGCCCATTGCGACAGGAATGACCTCATTTGGAGGCAAGCTTTATGTTCCTCAAAGTCTGTATTCCTGGCCATTCTTTGTTGACGTTGGT GGGGAGATCTTTGATCCGGAGACAAATTCATGGGCGGAAATGCCTGTAGGAATGGGCGAGGGCTGGCCAGCGAGGCAGGCTGGTACGAAGTTAAGTGCTGTCATAGATGGGGACTTGTATGCTTTGGAGCCATCAACTTCTTCTGATAGAGGTAAGATCAAGATTTATGATCCTCAGGAGGATGCTTGGAAGGTTGCCATTGGCCAGGTACCAGTGGGTGACTTTGCAGAGTCGGAATGTCCATACTTACTTGCAGGATTTCTTGGCNAGCTCA ATTTGATCATCN AAGATGTTNATNGCC AGATCNATNTTATGCC AA CCGATGTTCTGAAA CCTG ] [-] EMBL CB618113 [ ATTGCGACAGGAATGACNTCATTTGGAGGCAAGCTTTATGTTCCTCAAAGTCTGTATTCCTGGCCATTCTTTGTTGACGTTGGT GGGGAGATCTTTGATCCGGAGACAAATTCATGGGCGGAAATGCCTGTAGGAATGGGCGAGGGCTGGCCAGCGAGGCAGGCTGGTACGAAGTTAAGTGCTGTCATAGATGGGGACTTGTATGCTTTGGAGCCATCAACTTCTTCTGATAGAGGTAAGATCAAGATTTATGATCCTCAGGAGGATGCTTGGAAGGTTGCCATTGGCCAGGTACCAGTGGGTGACTTTGCAGAGTCGGAATGTCCATACTTACTTGCAGGATTTCTTGGCAAGCTCA ATTTGATCATCA AAGATGTAGATAGCA AGATCAATATAATGCA AA CCGATGTTCTGAAG CCTGTGGAG TTGTCAGCCCC TGGAAATGGT CCAACATGCCAAAATCAACAACTTTCTTCAGAACAGGAAACTAATTTGTGGAAAGTCATCGTGTCGAAAAATCTTGCAGCCGCTGAATTAGTCAGTTGTCAGGTGCTCAACATATAACTTGTTATGTGTTT ACTTTTGTTGAGTAGATGTGCTTCTACCAACATCTGATCAAGTCA ACGGTAGAG GCTATC ACCTTAAGTGAAAATGATCATTATCTGTGTATGGTTTGGATATGTGAGTAATGAGCTGCAGAAATCAATTCA AACGGCAATGTACATATTTATATGTAATCTGTGTGTAATTCAACTCTGT AATACATCACATAAGATAGAGAAAA CCATGCT ] [-] EMBL CB634246 [ CAAGCTTTATGTTCCTCAAAGTCTGTATTCCTGGCCATTCTTTGTTGACGTTGGT GGGGAGATCTTTGATCCGGAGACAAATTCATGGGCGGAAATGCCTGTAGGAATGGGCGAGGGCTGGCCAGCGAGGCAGGCTGGTACGAAGTTAAGTGCTGTCATAGATGGGGACTTGTATGCTTTGGAGCCATCAACTTCTTCTGATAGAGGTAAGATCAAGATTTATGATCCTCAGGAGGATGCTTGGAAGGTTGCCATTGGCCAGGTACCAGTGGGTGACTTTGCAGAGTCGGAATGTCCATACTTACTTGCAGGATTTCTTGGCAAGCTCA ATTTGATCATCA AAGATGTAGATAGCA AGATCAATATAATGCA AA CCGATGTTCTGAAG CCTGTGGAG TTGTCAGCCCC TGGAAATGGT CCAACATGCCAAAATCAACAACTTTCTTCAGAACAGGAAACTAATTTGTGGAAAGTCATCGTGTCGAAAAATCTTGCAGCCGCTGAATTAGTCAGTTGTCAGGTGCTCAACATATAACTTGTTATGTGTTT ACTTTTGTTGAGTAGATGTGCTTCTACCAACATCTGATCAAGTCA ACGGTAGAG GCTATC ACCTTAAGTGAAAATGATCATTATCTGTGTATGGTTTGGATATGTGAGTAATGAGCTGCAGAAATCAATTCA AACGGCAATGTACATATTTATATGTAATCTGTGTGTAATTCAACTCTGT AATACATCACATAAGATAGAGAAAA CCATGCT GGTTTCTTCAGTTCT ] [-] EMBL CB657261 [ GCTTTATGTTCCTCAAAGTCTGTATTCCTGGCCATTCTTTGTTGATGTTGGT GGGGAGATCTTTGATCCGGAGACAAATTCATGGGCGGAAATGCCTGTAGGAATGGGCGAGGGCTGGCCAGCGAGGCAGGCTGGTACGAAGTTAAGTGCTGTCATAGATGGGGACTTGTATGCTTTGGAGCCATCAACTTCTTCTGATAGAGGTAAGATCAAGATTTATGATCCTCAGGAGGATGCTTGGAAGGTTGCCATTGGCCAGGTACCAGTGGGTGACTTTGCAGAGTCGGAATGTCCATACTTACTTGCAGGATTTCTTGGCAAGCTCA ATTTGATCATCA AAGATGTAGATAGCA AGATCAATATAATGCA AA CCGATGTTCTGAAG CCTGTGGAG TTGTCAGCCCC TGGAAATGGT CCAACATGCCAAAATCAACAACTTTCTTCAGAACAGGAAACTAATTTGTGGAAAGTCATCGTGTCGAAAAATCTTGCAGCCGCTGAATTAGTCAGTTGTCAGGTGCTCAACATATAACTTGTTATGTGTTT ACTTTTGTTGAGTAGATGTGCTTCTACCAACATCTGATCAAGTCA ACGGTAGAG GCTATC ACCTTAAGTGAAAATGATCATTATCTGTGTATGGTTTGG ATGTGAGTAATGAGCTGCAGAAATCAATTCA AACGGCAATGTACATATTTATATGTAATCTGTGTGTAATTCAACTCTGT AATACATCACATAAGATAGAGAAAACCCATGCT GGTTTCT ] [-] EMBL CB642005 [ ACAAATTCATGGGCGGAAATGCCTGTAGGAATGGGCGAGGGCTGGCCAGCGAGGCAGGCTGGTACGAAGTTAAGTGCTGTCATAGATGGGGACTTGTATGCTTTGGAGCCATCAACTTCTTCTGATAGAGGTAAGATCAAGATTTATGATCCTCAGGAGGATGCTTGGAAGGTTGCCATTGGCCAGGTACCAGTGGGTGACTTTGCAGAGTCGGAATGTCCATACTTACTTGCAGGATTTCTTGGCAAGCTCA ATTTGATCATCA AAGATGTAGATAGCA AGATCAATATAATGCA AA CCGATGTTCTGAAG CCTGTGGAG TTGTCAGCCCC TGGAAATGGT CCAACATGCCAAAATCAACAACTTTCTTCAGAACAGGAAACTAATTTGTGGAAAGTCATCGTGTCGAAAAATCTTGCAGCCGCTGAATTAGTCAGTTGTCAGGTGCTCAACATATAACTTGTTATGTGTTT ACTTTTGTGGAGTAGATGTGCTTCTACCAACATCTGATCAAGTCA ACGGTAGAG GCTATC ACCTTAAGCGAAAATGATCATTATCTGTGTATGGTTTGG ATGTGAGTAATGAGCTGCAGAAATCAATTCA AACGGCAATGTACATATTTATATGTAATCTGTGTGTAATTCAACTCTGT AATACATCACATAAGATAGAGAAAA CCATGCT GGTTTCTTCAGTTCTCAAGACAACAGTGCTATCTCCATCAGCACTGCAAGATATATTAACCTTT ] [+] EMBL BI811796 [ ATCCTCAGGAGGATGCTTGGAAGGTT CCATTGGCCAGGTACCAGTGGGTGACTTTGCAGAGTCGGAATGTCCATACTTACTTGCAGGATTTCTTGGCAAGCTCACATTTGATCATCACAAGATGTAGATA CACAGATCCATATAATGCACAA CCGATGTTCTGAA CCTGTGGA TTGTCAGCCCC TGGAAATGGT CC ACATGCCCAAATC AC ACTTTCTTCAGAACAGGAAACTAATTTGTGGAAAGTCATCGTGTCGAAAAATCTT CAGCCGCTGAATTAGTCAGTTGTCAGGTGCTCAACATATAACTTGTTATGTGTTT ACTTTTGTTGAGTAGATGTGCTTCTACCAACATCTGATCAAGTCA ACGGTAGAG GCTATC ACCCTAAGTGAAAATGATCATTATCTGTGTATGGTTTGGATATGTGAGTAATGAGCTGCAGAAATCAATTCA AACGGCAATGTACATATTTATATGTAATCTGTGTGTAATTCAACTCTGT AATACATCACATAAGATAGAGAAAA CCATGCTCGGTTTCTTCAGTTCTCAAGAAAAa ] [-] EMBL AU225624 [ tagGCA AGATCAATATAATGCA AACCCGATGTTCTGAAGCCCTGTGGAGTTTGTCAGCCCCGTGGAAATGGTCCCTACATGCCAAAATCAACTACTTTCTTCAGAACAGG AACTAATTTGTGGAAAGTCATCGTGTCGAAAAATCTTGCAGCCGCTGAATTAGTCAGTTGTCAGGTGCTCAACATATAACTTGTTATGTGTTT ACTTTTGTTGAGTAGATGTGCTTCTACCAACATCTGATCAAGTCA ACGGTAGAG GCTATC ACCTTAAGTGAAAATGATCATTATCTGTGTATGGTTTGG ATGTGAGTAATGAGCTGCAGAAATCAATTCA AACGGCAATGTACATATTTATATGTAATCTGTGTGTAATTCAACTCTGT AATACATCACATAAGATAGAGAAAA CCATGCT GGTTTCTTCAGTTCTCAAGACAACAGTGCTATCTCCATCAGCACTGCCAAATATATTAACCTTTTTCAgcggc ] [+] EMBL BI806841 [ ACAGGAAACTAATTTGTGGAAAGTCATCGTGTCG AAAATCTTGCAGCCGCTGAATTAGTCAGTTGTCAGGTGCTC ACATATAACTTGTTATGTGTTTGACTTTTGTTGAGTAGATGTGCTTNTACCCACATCTGATCAAGTCACACGGTAGAG GCTATCNCCCTTAAGTG AAATGATCATTATCTGTGTATGGTTTGGATATGTGAGTAATGAGCTGCAGAAATCNATTCACAACGGCCATGTACATATTTATATGTAATCTGTGTGTAATTCAACTCTGT AATACATCACATAAGATAGAGAAAA CGATGCT GGTTTCTTCAGTTCTCNAGACCACNGTGTTATCTCCATCAGCACTGCCCAATATATGAACCTTTTTCATTGTCATTCCNTTGGTAAGCTCAGCATTTTNTTTCCCCAAAAAAAAAA] [+] EMBL BI813662 [ AAGTCA ACGGTAGAGCGCTATC ACCTTAAGTGCAAATGATCATTATCTGTGTATGGTTTGGATATGTGAGTAATGAGCTGCAGAAATC ATTC AACGGCAATGTACATATTTATATGTAATCTGTGTGTAATTCAACTCTGTCAATACATCACATAAGATAGAG AAA CCATGCT GGTTTCTTCAGTTCTCAAGACAACAGTGTTATCTCCATCAGCACTGCCAAATATATGAACCTTTTTCATTGTCATTCCATTGGTAAaaaaaaaa ] consensusID : consensus_14581#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 772 fasta sequence [GCACCATCTTATCTTGCAAGGTTAGAGAAGGAAGTTGTGAGCTTTAACACCATGCTGAGATTACTGTTCTCTTTGGGAATTTGCAGATAGAAAGGAGAAGTGCTCAAAATGGGGGCCCTTTTGAGCTCCCCCAACAGCAAGAACCAGCCATGGGAGCATGGTGAAGCTTCAAAGGCAGATTCCTCCAAGAAGCTGCGGATGTCGGCGCCGCCTCTGTCCGGTGGCTACGACCACCCCGGGCTGATCCCGGGGCTCCCGGATGAGATCTCGCTGCAGATCCTCGCAAGGATGCCCCGGATGGGTTATCTGAATGCAAAGATGGTTTCGAGGAGCTGGAAGGCTGCGATCACTGGCGTGGAGCTGTACCGGGTGAGGAAGGAGCTGGGTGTGAGTGAGGAATGGCTGTACATGCTTACCAAGTCAGATGATGGGAAGCTAGTGTGGAATGCATTCGATCCGGTTTGTGGCCAATGGCAGAGGCTGCCACTGATGCCGGGGATCAGCCATGGAGGAGAATGCAAGAGGGGCATCCCTGGGTTGTGGTTAGGGGATTTGTTGAGCGCCGGCATCAGGGTCTCTGATGTTATTAGAGGCTGGCTTGGCCAAAGGGATTCATTGGATAGGCTTCCGTTCTGCGGTTGTGCAATTGGGACAGTCGACGGGTGCATCTATGTTTTAGGTGGATTCTCTAGAGGCTCGGCGATGAAATGTGTATGGAGGTATGATCCTTTTATCAATGCGTGGCAGGAGGTTAGCTCGATGAGCACCGGGC] [+] EMBL CB634245 [GCACCATCTTATCTTGCAAGGTTAGAGAAGGAAGTTGTGAGCTTTAACACCATGCTGAGATTACTGTTCTCTTTGGGAATTTGCAGATAGAAAGGAGAAGTGCTCAAAATGGGGGCCCTTTTGAGCTCCCCCAACAGCAAGAACCAGCCATGGGAGCATGGTGAAGCTTCAAAGGCAGATTCCTCCAAGAAGCTGCGGATGTCGGCGCCGCCTCTGTCCGGTGGCTACGACCACCCCGGGCTGATCCCGGGGCTCCCGGATGAGATCTCGCTGCAGATCCTCGCAAGGATGCCCCGGATGGGTTATCTGAATGCAAAGATGGTTTCGAGGAGCTGGAAGGCTGCGATCACTGGCGTGGAGCTGTACCGGGTGAGGAAGGAGCTGGGTGTGAGTGAGGAATGGCTGTACATGCTTACCAAGTCAGATGATGGGAAGCTAGTGTGGAATGCATTCGATCCGGTTTGTGGCCAATGGCAGAGGCTGCCACTGATGCCGGGGATCAGCCATGGAGGAGAATGCAAGAGGGGCATCCCTGGGTTGTGGTTAGGGGATTTGTTGAGCGCCGGCATCAGGGTCTCTGATGTTATTAGAGGCTGGCTTGGCCAAAGGGATTCATTGGATAGGCTTCCGTTCTGCGGTTGTGCAATTGGGACAGTCGACGGGTGCATCTATGTTTTAGGTGGATTCTCTAGAGGCTCGGCGATGAAATGTGTATGGAGGTATGATCCTTTTATCAATGCGTGGCAGGAGGTTAGCTCGATGAGCACCGGGC] consensusID : consensus_14581#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 580 fasta sequence [TGATCCGGAGACAAATTCATGGGCGGAAATGCCTGTAGGAATGGGCGAGGGCTGGCCAGCGAGGCAGGCTGGTACGAAGTTAAGTGCTGTCATAGATGGGGACTTGTATGCTTTGGAGCCATCAACTTCTTCTGATAGAGGTAAGATCAAGATTTATGATCCTCAGGAGGATGCTTGGAAGGTTGCCATTGGCCAGGTACCAGTGGGTGACTTTGCAGAGTCGGAATGTCCATACTTACTTGCAGGATTTCTTGGCAAGCTCAATTTGTGGAAAGTCATCGTGTCGAAAAATCTTGCAGCCGCTGAATTAGTCAGTTGTCAGGTGCTCAACATATAACTTGTTATGTGTTTACTTTTGTTGAGTAGATGTGCTTCTACCAACATCTGATCAAGTCAACGGTAGAGGCTATCACCTTAAGTGAAAATGATCATTATCTGTGTATGGTTTGGATGTGAGTAATGAGCTGCAGAAATCAATTCAAACGGCAATGTACATATTTATATGTAATCTGTGTGTAATTCAACTCTGTAATACATCACATAAGATAGAGAAAACCATGCTGGTTTCTTCAAAAAAAAA] [+] EMBL AU093115 [TGATCCGGAGACAAATTCATGGGCGGAAATGCCTGTAGGAATGGGCGAGGGCTGGCCAGCGAGGCAGGCTGGTACGAAGTTAAGTGCTGTCATAGATGGGGACTTGTATGCTTTGGAGCCATCAACTTCTTCTGATAGAGGTAAGATCAAGATTTATGATCCTCAGGAGGATGCTTGGAAGGTTGCCATTGGCCAGGTACCAGTGGGTGACTTTGCAGAGTCGGAATGTCCATACTTACTTGCAGGATTTCTTGGCAAGCTCAATTTGTGGAAAGTCATCGTGTCGAAAAATCTTGCAGCCGCTGAATTAGTCAGTTGTCAGGTGCTCAACATATAACTTGTTATGTGTTTACTTTTGTTGAGTAGATGTGCTTCTACCAACATCTGATCAAGTCAACGGTAGAGGCTATCACCTTAAGTGAAAATGATCATTATCTGTGTATGGTTTGGATGTGAGTAATGAGCTGCAGAAATCAATTCAAACGGCAATGTACATATTTATATGTAATCTGTGTGTAATTCAACTCTGTAATACATCACATAAGATAGAGAAAACCATGCTGGTTTCTTCAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14581#0 AACCCGGCGCTGCGGCTCCACACTTCTCAGCCCGCCCGCTCCTCCTCCTCCCCGGCGCTG 60 consensus_14581#2 ------------------------------------------------------------ consensus_14581#1 ------------------------------------------------------------ consensus_14581#0 CGGCTACACAACGCAACGGCTTCCCGGCGGCACAGCGGCGAGGAGGAGGTCCGGCAAGGA 120 consensus_14581#2 ------------------------------------------------------------ consensus_14581#1 ------------------------------------------------------------ consensus_14581#0 GATAGAAAGGAGAAGTGCTCAAAATGGGGGCCCTTTTGAGCTCCCCCAACAGCAAGAACC 180 consensus_14581#2 ------------------------------------------------------------ consensus_14581#1 ------------------------------------------------------------ consensus_14581#0 AGCCATGGGAGCATGGTGAAGCTTCAAAGGCAGATTCCTCCAAGAAGCTGCGGATGTCGG 240 consensus_14581#2 ------------------------------------------------------------ consensus_14581#1 ------------------------------------------------------------ consensus_14581#0 CGCCGCCTCTGTCCGGTGGCTACGACCACCCCGGGCTGATCCCGGGGCTCCCGGATGAGA 300 consensus_14581#2 ------------------------------------------------------------ consensus_14581#1 ------------------------------------------------------------ consensus_14581#0 TCTCGCTGCAGATCCTCGCAAGGATGCCCCGGATGGGTTATCTGAATGCAAAGATGGTTT 360 consensus_14581#2 ------------------------------------------------------------ consensus_14581#1 ------------------------------------------------------------ consensus_14581#0 CGAGGAGCTGGAAGGCTGCGATCACTGGCGTGGAGCTGTACCGGGTGAGGAAGGAGCTGG 420 consensus_14581#2 ------------------------------------------------------------ consensus_14581#1 ------------------------------------------------------------ consensus_14581#0 GTGTGAGTGAGGAATGGCTGTACATGCTTACCAAGTCAGATGATGGGAAGCTAGTGTGGA 480 consensus_14581#2 ------------------------------------------------------------ consensus_14581#1 ------------------------------------------------------------ consensus_14581#0 ATGCATTCGATCCGGTTTGTGGCCAATGGCAGAGGCTGCCACTGATGCCGGGGATCAGCC 540 consensus_14581#2 ------------------------------------------------------------ consensus_14581#1 ------------------------------------------------------------ consensus_14581#0 ATGGAGGAGAATGCAAGAGGGGCATCCCTGGGTTGTGGTTAGGGGATTTGTTGAGCGCCG 600 consensus_14581#2 ------------------------------------------------------------ consensus_14581#1 ------------------------------------------------------------ consensus_14581#0 GCATCAGGGTCTCTGATGTTATTAGAGGCTGGCTTGGCCAAAGGGATTCATTGGATAGGC 660 consensus_14581#2 ------------------------------------------------------------ consensus_14581#1 ------------------------------------------------------------ consensus_14581#0 TTCCGTTCTGCGGTTGTGCAATTGGGACAGTCAACGGGTGCATCTATGTTTTAGGTGGAT 720 consensus_14581#2 ------------------------------------------------------------ consensus_14581#1 ------------------------------------------------------------ consensus_14581#0 TCTCTAGAGGCTCGGCGATGAAATGTGTATGGAGGTATGATCCTTTTGTCAATGCGTGGC 780 consensus_14581#2 ------------------------------------------------------------ consensus_14581#1 ------------------------------------------------------------ consensus_14581#0 AGGAGGTTAGCTCGATGAGCACCGGGCGCGCATTCTGCAAGGCTAGCCTGCTGAACAACA 840 consensus_14581#2 ------------------------------------------------------------ consensus_14581#1 ------------------------------------------------------------ consensus_14581#0 AGCTGTATGTTGTTGGTGGTGTCAGCAAAGGCAAGAACGGGTTAGCTCCGCTCCAATCCG 900 consensus_14581#2 ------------------------------------------------------------ consensus_14581#1 ------------------------------------------------------------ consensus_14581#0 CCGAGGTGTTTGACCCAAGGACAGGAATTTGGGTGGAGGTGCCTGACATCCCGTTCTCGA 960 consensus_14581#2 ------------------------------------------------------------ consensus_14581#1 ------------------------------------------------------------ consensus_14581#0 AAGCGCAAGCTCTACCAACTGCCTTCTTGGCTGAGCTGCTGAAGCCCATTGCGACAGGAA 1020 consensus_14581#2 ------------------------------------------------------------ consensus_14581#1 ------------------------------------------------------------ consensus_14581#0 TGACCTCATTTGGAGGCAAGCTTTATGTTCCTCAAAGTCTGTATTCCTGGCCATTCTTTG 1080 consensus_14581#2 ------------------------------------------------------------ consensus_14581#1 ------------------------------------------------------------ consensus_14581#0 TTGATGTTGGTGGGGAGATCTTTGATCCGGAGACAAATTCATGGGCGGAAATGCCTGTAG 1140 consensus_14581#2 ----------------------TGATCCGGAGACAAATTCATGGGCGGAAATGCCTGTAG 38 consensus_14581#1 ----GCACCATCTTATCTTGCAAGGTTAGAGAAGGAAGTTGTGAGCTTTAACACC---AT 53 * * * * ** * ** ** ** ** * consensus_14581#0 GAATGGGCGAGGGCTGGCCAGCGAGGCAGGCTGGTACGAAGTTAAGTGCTGTCATAGATG 1200 consensus_14581#2 GAATGGGCGAGGGCTGGCCAGCGAGGCAGGCTGGTACGAAGTTAAGTGCTGTCATAGATG 98 consensus_14581#1 GCTGAGATTACTGTTCTCTTTGGGAATTTGCAGATAGAAAG--GAGAAGTGCTCAAAATG 111 * * * * * * * ** * ** *** ** ** * *** consensus_14581#0 GGGAC--TTGTATGCTTTGGAGCCATCAACTTCTTCTGATAGAGGTAAGATCAAGATTTA 1258 consensus_14581#2 GGGAC--TTGTATGCTTTGGAGCCATCAACTTCTTCTGATAGAGGTAAGATCAAGATTTA 156 consensus_14581#1 GGGGCCCTTTTGAGCTCCCCCAACAGCAAGAACCAGCCATGGGAGCATGGTGAAGCTTCA 171 *** * ** * *** ** *** * ** * * * * * *** ** * consensus_14581#0 TGATC----CTCAGGAGGATGCTTGGAAGGTTGCCATTGGCCAGGTACCAGTGGGT--GA 1312 consensus_14581#2 TGATC----CTCAGGAGGATGCTTGGAAGGTTGCCATTGGCCAGGTACCAGTGGGT--GA 210 consensus_14581#1 AAGGCAGATTCCTCCAAGAAGCTGCGGATGTCGGCGCCGCCTCTGT-CCGGTGGCTACGA 230 * * * ** *** * * ** * * * * ** ** **** * ** consensus_14581#0 CTTTGCAGAGTCGGAATGTCCATACTTACTTGCAGGATTTCTTGGCAAGCTCAATTTGAT 1372 consensus_14581#2 CTTTGCAGAGTCGGAATGTCCATACTTACTTGCAGGATTTCTTGGCAAGCTCAATTTG-- 268 consensus_14581#1 CCACCCCGGGCTG--ATCCCGGGGCTCCCGGATGAGATCTCGCTGCAGATCCTCGCAAGG 288 * * * * * ** * ** * *** ** *** * consensus_14581#0 CATCAAAGATGTAGATAGCAAGATCAATATAATGCAAACCGATGTTCTGAAGCCTGTGGA 1432 consensus_14581#2 ------------------------------------------------------------ consensus_14581#1 ATGCCCCGGATGGGTTATCTGAATGCAAAGATGGTTTCGAGGAGCTGGAAGGCTGCGATC 348 consensus_14581#0 GTTGTCAGCCCCTGGAAATGGTCCAACATGCCAAAATCAACAACTTTCTTCAGAACAGGA 1492 consensus_14581#2 ------------------------------------------------------------ consensus_14581#1 ACTGGCGTGGAGCTGTACCGGGTGAGGAAGGAGCTGGGTGTGAGTGAGGAATGGCTGTAC 408 consensus_14581#0 AACTAATTTGTGGAAAGTCATCGTGTCGAAAAATCTTGCAG----CCGCTGAATTAGTCA 1548 consensus_14581#2 ----------TGGAAAGTCATCGTGTCGAAAAATCTTGCAG----CCGCTGAATTAGTCA 314 consensus_14581#1 ATG-----CTTACCAAGTCAGATGATGGGAAGCTAGTGTGGAATGCATTCGATCCGGTTT 463 * ****** * * ** * ** * * ** ** consensus_14581#0 GTTGTCAGGTGCTCAACATATAACT--TGTTATGTGTTTACTTTTGTTGAGTA-----GA 1601 consensus_14581#2 GTTGTCAGGTGCTCAACATATAACT--TGTTATGTGTTTACTTTTGTTGAGTA-----GA 367 consensus_14581#1 GTGGCCAATGGCAGAGGCTGCCACTGATGCCGGGGATCAGCCATGGAGGAGAATGCAAGA 523 ** * ** ** * * *** ** * * * * * *** * ** consensus_14581#0 TGTGCTTCTACCAACATCTGATCAAGTCAACGGTAGAGGCTATCACCTTAAGTGAAAATG 1661 consensus_14581#2 TGTGCTTCTACCAACATCTGATCAAGTCAACGGTAGAGGCTATCACCTTAAGTGAAAATG 427 consensus_14581#1 GGGGCATCC-CTGGGTTGTGGTTAGGGGATTTGTTGAG--CGCCGGCATCAGGGTCTCTG 580 * ** ** * * ** * * * * ** *** * * * ** * ** consensus_14581#0 ATCATTATCTGTGTATGGTTTGGATGTGAGTAATGAGCTG-CAGAAATCAATTCAAACG- 1719 consensus_14581#2 ATCATTATCTGTGTATGGTTTGGATGTGAGTAATGAGCTG-CAGAAATCAATTCAAACG- 485 consensus_14581#1 AT-GTTATTAGAGGCTGGCTTGGCCAAAGGGATTCATTGGATAGGCTTCCGTTCTGCGGT 639 ** **** * * *** **** * * * * * ** ** *** * consensus_14581#0 ---GCAATGTACATATTT-ATATGTA-ATCTGTGTGT-AATTCAACTCTGTAATACATC- 1772 consensus_14581#2 ---GCAATGTACATATTT-ATATGTA-ATCTGTGTGT-AATTCAACTCTGTAATACATC- 538 consensus_14581#1 TGTGCAATTGGGACAGTCGACGGGTGCATCTATGTTTTAGGTGGATTCTCTAGAGGCTCG 699 ***** * * * * ** **** *** * * * * *** ** ** consensus_14581#0 ---ACATAAGATAGAGAAAACCATGCTGGTTTCTTCAGTTCTCAAGACAACAGTGCTATC 1829 consensus_14581#2 ---ACATAAGATAGAGAAAACCATGCTGGTTTCTTCAA-----AAAAAAA---------- 580 consensus_14581#1 GCGATGAAATGTGTATGGAGGTATGATCCTTTTATCAATGCGTGGCAGGAGGTTAGCTCG 759 * ** * * * *** * *** *** * * consensus_14581#0 TCCATCAGCACTGCCAAATATATTAACCTTTTTCATTGTCATTCCNTTGGTAAGCTCAGC 1889 consensus_14581#2 ------------------------------------------------------------ consensus_14581#1 ATGAGCACCGGGC----------------------------------------------- 772 consensus_14581#0 ATTTTNTTTCCCCAAAAAAAAAA 1912 consensus_14581#2 ----------------------- consensus_14581#1 ----------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||