These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14603#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 2267 fasta sequence [CCTCTCCTTTCCCCCGCTCCCCTTCCCCGAGGAGCCACGCCGCCGCCGCCGCCGCCGCCATGCCGAAGCACTACCGGCCTGCGGGCAAGAAGAAGGAGGGGAACGCGGCGAAGTACATCACCAGGACCAAGGCGGTGAAGTACCTGCAGATTAGCCTCGCAACCTTCAGGAAGCTATGCATTCTCAAGGGCGTCTTTCCCCGGGATCCAAAGAAGAAGGTGGAAGGGAACCACAAGACCTACTACCACATGAAGGATATTGCCTTCCTGGCCCATGATCCCTTGATTGAGAAGTTTAGAGAAATCAAGGTCCACAGGAAGAAGGTCAAAAAGGCGTTTGCTAAGAAAAATAAAGATCTTGCAGACAGATTA-TTGAACCGACCACCAACTTACAAACTTGACAGGCTTATTCTTGAAAGATATCCAACTTTT-GTTGATGCTCTTCGTGACTTGGATGATTGCCTAACAATGGTGCATCTTTTTGCTGCGTTGCCTGCTGTTGAAGGTGAACGTGTGCAAGTTCAGCGGATTCATAATTGCCGCAGGTTGAGCCATGAATGGCAAGCATATATATCTCGAACTCATTCCCTGCGAAAGACATTTATATCCGTCAAGGGCATATATTATCAAGCTGAAGTTCAAGGTCAAAAGATCACCTGGCTAACTCCACATGCTCTTCAGCAAGTTTTAACTGATGACGTTGACTTCAATGTGATGCTTACCTTTTTGGAATTCTATGAGACACTTCTGGGATTTATAAACTTCAAGCTTTACCATTCGATAAATGTAAATTATCCTCCTGTTCTGGATCCTCGTTTGGAAGCTTTAGCTTCTGAGCTCTATGCGTTGTGCCGGTACATGTCTTCTGGAAGAGTACCTGGAAATTCAGAACCTGCTGGACTAATTGAAGACAAAGAGGGTGAAGACAATAAAGAGAGCTCAAAAACAGATGAGTCTGAACTCAGATTGGCACAACTTCAACACCAGCTCCCAACTAATGAACCTGGAGCGCTGATGCATCTTGTACAAGAATCTACTGCTGCTGATGCAGACGACGCTGATGCCAAAGAATGCAGGAGTTTATTCAAAAACCTGAAGTTCTACCTAAGTCGTGAGGTGCCTAGGGAATCTCTCTTATTTATCATTCCAGCATTTGGTGGTACCGTTTCATGGGAAGGAGAAGGAGCTCCTTTTGATGAGACAGATGAAGACATCACTCATCAGATTGTTGATAGACCGACCCAAAGCCACGTTTTCCTCTCTAGGGAGTATGTTCAACCACAGTGGATATATGATTGCGTGAATGCTCGCATCATATTGCCGACAGAAGGTTATATTGTCGGGAGGGTGCCTCCACCACATTTATCTCCCTTTGTGGACAATGATGCAGAGGGTTACATTCCTGAGTATGCAGAGACCATTAAGAGGCTGCAAGCTGCTGCTCAAAGCCAGGTG-TTGCCTCTGCCAAGTTTAGGGGACGAAGATATGGAAAATTCACTGGTAGAGGCAATTATTGATCGATCAGAGTCTAATGAAATTGCTGACAAGAAGAGGAAGTTGGAGATGCTAGAGAAGCAGTACCACGATGAGCTGAGGATGGAATACGAAGGAAAGACCTTCTCAAATAGGACGGCAGATAACCAACCAGATGTTGTGGACAAAAGTGATACTAAAGAAGCTGACGATCATATGGAGGACTCTCATAAACAAGCCGAGAAGGATGCTGCTGACATTTCCAAGACCCTTATGT-CTCG-CAAGCAGAGAGGCCTTCTTCAAGCAATTGAGATTAACCAGGAAAGGAAAAAGGACAAGGTGAACTTGCTGAAGAAAAGGAAAAAGAATGCTGATTCCAGTGCTTCGGCCAAAGGTCGCTGAGGCTCGAACTTCATTTGCTCCATGCTGTATCTGTTTTGACAAATTGTTCATCGGTCGCTGCTTCTGTGGAGTTGCTGCCATGATCTGCACACCTACGTATTCTTATGCATGATAAGCAGCTCCATTTTGATGTTTAGGTGTTTTACATGGGCTTTAAGAATATGCCCAGATACCTCAGTAGAAAATTTTGAGCTATTTACCTAGTGTCCAAAGTGTGTTCCCTGATGATTAGTAGCTATTACTCTTCCAAATTTTGACGCGGTTGCTGCTCAAGTGCTCATCTAGCTACATAATTCTTAATCAGGAGTTTAGGGCCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN] [+] EMBL AK066652 [CCTCTCCTTTCCCCCGCTCCCCTTCCCCGAGGAGCCACGCCGCCGCCGCCGCCGCCGCCATGCCGAAGCACTACCGGCCTGCGGGCAAGAAGAAGGAGGGGAACGCGGCGAAGTACATCACCAGGACCAAGGCGGTGAAGTACCTGCAGATTAGCCTCGCAACCTTCAGGAAGCTATGCATTCTCAAGGGCGTCTTTCCCCGGGATCCAAAGAAGAAGGTGGAAGGGAACCACAAGACCTACTACCACATGAAGGATATTGCCTTCCTGGCCCATGATCCCTTGATTGAGAAGTTTAGAGAAATCAAGGTCCACAGGAAGAAGGTCAAAAAGGCGTTTGCTAAGAAAAATAAAGATCTTGCAGACAGATTA TTGAACCGACCACCAACTTACAAACTTGACAGGCTTATTCTTGAAAGATATCCAACTTTT GTTGATGCTCTTCGTGACTTGGATGATTGCCTAACAATGGTGCATCTTTTTGCTGCGTTGCCTGCTGTTGAAGGTGAACGTGTGCAAGTTCAGCGGATTCATAATTGCCGCAGGTTGAGCCATGAATGGCAAGCATATATATCTCGAACTCATTCCCTGCGAAAGACATTTATATCCGTCAAGGGCATATATTATCAAGCTGAAGTTCAAGGTCAAAAGATCACCTGGCTAACTCCACATGCTCTTCAGCAAGTTTTAACTGATGACGTTGACTTCAATGTGATGCTTACCTTTTTGGAATTCTATGAGACACTTCTGGGATTTATAAACTTCAAGCTTTACCATTCGATAAATGTAAATTATCCTCCTGTTCTGGATCCTCGTTTGGAAGCTTTAGCTTCTGAGCTCTATGCGTTGTGCCGGTACATGTCTTCTGGAAGAGTACCTGGAAATTCAGAACCTGCTGGACTAATTGAAGACAAAGAGGGTGAAGACAATAAAGAGAGCTCAAAAACAGATGAGTCTGAACTCAGATTGGCACAACTTCAACACCAGCTCCCAACTAATGAACCTGGAGCGCTGATGCATCTTGTACAAGAATCTACTGCTGCTGATGCAGACGACGCTGATGCCAAAGAATGCAGGAGTTTATTCAAAAACCTGAAGTTCTACCTAAGTCGTGAGGTGCCTAGGGAATCTCTCTTATTTATCATTCCAGCATTTGGTGGTACCGTTTCATGGGAAGGAGAAGGAGCTCCTTTTGATGAGACAGATGAAGACATCACTCATCAGATTGTTGATAGACCGACCCAAAGCCACGTTTTCCTCTCTAGGGAGTATGTTCAACCACAGTGGATATATGATTGCGTGAATGCTCGCATCATATTGCCGACAGAAGGTTATATTGTCGGGAGGGTGCCTCCACCACATTTATCTCCCTTTGTGGACAATGATGCAGAGGGTTACATTCCTGAGTATGCAGAGACCATTAAGAGGCTGCAAGCTGCTGCTCAAAGCCAGGTG TTGCCTCTGCCAAGTTTAGGGGACGAAGATATGGAAAATTCACTGGTAGAGGCAATTATTGATCGATCAGAGTCTAATGAAATTGCTGACAAGAAGAGGAAGTTGGAGATGCTAGAGAAGCAGTACCACGATGAGCTGAGGATGGAATACGAAGGAAAGACCTTCTCAAATAGGACGGCAGATAACCAACCAGATGTTGTGGACAAAAGTGATACTAAAGAAGCTGACGATCATATGGAGGACTCTCATAAACAAGCCGAGAAGGATGCTGCTGACATTTCCAAGACCCTTATGT CTCG CAAGCAGAGAGGCCTTCTTCAAGCAATTGAGATTAACCAGGAAAGGAAAAAGGACAAGGTGAACTTGCTGAAGAAAAGGAAAAAGAATGCTGATTCCAGTGCTTCGGCCAAAGGTCGCTGAGGCTCGGACTTCATTTGCTCCATGCTGTATCTGTTTTGACAAATTGTTCATCGGTCGCTGCTTCTGTGGAGTTGCTGCCATGATCTGCACACCTACGTATTCTTATGCATGATAAGCAGCTCCATTTTGATGTTTAGGTGTTTTACATGGGCTTTAAGAATATGCCCAGATACCTCAGTAGAAAATTTTGAGCTATTTACCTAGTGTCCAAAGTGTGTTCCCTGATGATTAGTAGCTATTACTCTTCCAAATTTTGACGCGGTTGCTGCTCAAGTGCTCATCTAGCTACATAATTCTTAATCAGGA ] [+] EMBL AK099383 [CCTCTCCTTTCCCCCGCTCCCCTTCCCCGAGGAGCCACGCCGCCGCCGCCGCCGCCGCCATGCCGAAGCACTACCGGCCTGCGGGCAAGAAGAAGGAGGGGAACGCGGCGAAGTACATCACCAGGACCAAGGCGGTGAAGTACCTGCAGATTAGCCTCGCAACCTTCAGGAAGCTATGCATTCTCAAGGGCGTCTTTCCCCGGGATCCAAAGAAGAAGGTGGAAGGGAACCACAAGACCTACTACCACATGAAGGATATTGCCTTCCTGGCCCATGATCCCTTGATTGAGAAGTTTAGAGAAATCAAGGTCCACAGGAAGAAGGTCAAAAAGGCGTTTGCTAAGAAAAATAAAGATCTTGCAGACAGATTA TTGAACCGACCACCAACTTACAAACTTGACAGGCTTATTCTTGAAAGATATCCAACTTTT GTTGATGCTCTTCGTGACTTGGATGATTGCCTAACAATGGTGCATCTTTTTGCTGCGTTGCCTGCTGTTGAAGGTGAACGTGTGCAAGTTCAGCGGATTCATAATTGCCGCAGGTTGAGCCATGAATGGCAAGCATATATATCTCGAACTCATTCCCTGCGAAAGACATTTATATCCGTCAAGGGCATATATTATCAAGCTGAAGTTCAAGGTCAAAAGATCACCTGGCTAACTCCACATGCTCTTCAGCAAGTTTTAACTGATGACGTTGACTTCAATGTGATGCTTACCTTTTTGGAATTCTATGAGACACTTCTGGGATTTATAAACTTCAAGCTTTACCATTCGATAAATGTAAATTATCCTCCTGTTCTGGATCCTCGTTTGGAAGCTTTAGCTTCTGAGCTCTATGCGTTGTGCCGGTACATGTCTTCTGGAAGAGTACCTGGAAATTCAGAACCTGCTGGACTAATTGAAGACAAAGAGGGTGAAGACAATAAAGAGAGCTCAAAAACAGATGAGTCTGAACTCAGATTGGCACAACTTCAACACCAGCTCCCAACTAATGAACCTGGAGCGCTGATGCATCTTGTACAAGAATCTACTGCTGCTGATGCAGACGACGCTGATGCCAAAGAATGCAGGAGTTTATTCAAAAACCTGAAGTTCTACCTAAGTCGTGAGGTGCCTAGGGAATCTCTCTTATTTATCATTCCAGCATTTGGTGGTACCGTTTCATGGGAAGGAGAAGGAGCTCCTTTTGATGAGACAGATGAAGACATCACTCATCAGATTGTTGATAGACCGACCCAAAGCCACTTTTTCCTCTCTAGGGAGTATGTTCAACCACAGTGGATATATGATTGCGTGAATGCTCGCATCATATTGCCGACAGAAGGTTATATTGTCGGGAGGGTGCCTCCACCACATTTATCTCCCTTTGTGGACAATGATGCAGAGGGTTACATTCCTGAGTATGCAGAGACCATTAAGAGGCTGCAAGCTGCTGCTCAAAGCCAGGTG TTGCCTCTGCCAAGTTTAGGGGACGAAGATATGGAAAATTCACTGGTAGAGGCAATTATTGATCGATCAGAGTCTAATGAAATTGCTGACAAGAAGAGGAAGTTGGAGATGCTAGAGAAGCAGTACCACGATGAGCTGAGGATGGAATACGAAGGAAAGACCTTCTCAAATAGGACGGCAGATAACCAACCAGATGTTGTGGACAAAAGTGATACTAAAGAAGCTGACGATCATATGGAGGACTCTCATAAACAAGCCGAGAAGGATGCTCCTGACATTTCCAAGACCCTTATGT CTCG CAAGCAGAGAGGCCTTCTTCAAGCAATTGAGATTAACCAGGAAAGGAAAAAGGACAAGGTGAACTTGCTGAAGAAAAGGAAAAAGAATGCTGATTCCAGTGCTTCGGCCAAAGGTCGCTGAGGCTCGAACTTCATTTGCTCCATGCTGTATCTGTTTTGACAAATTGTTCATCGGTCGCTGCTTCTGTGGAGTTGCTGCCATGATCTGCACACCTACGTATTCTTATGCATGATAAGCAGCTCCATTTTGATGTTTAGGTGTTTTACATGGGCTTTAAGAATATGCCCAGATACCTCAGTAGAAAATTTTGAGCTATTTACCTAGTGTCCAAAGTGTGTTCCCTGATGATTAGTAGCTA ] [+] EMBL C72881 [ CGCTCCCCTTCCCCGANGAGCCACGCCGCCGCCGCCGCCGCCGCCATGCCGAAGCACTACCGGCCTGCGGGCAAGAAGAAGGAGGGGAACGCNGCGAAGTACATCACCAGGACCAAGGCGGTGAAGTACCTGCAGATTAGCCTCGCAACCTTCAGGAAGCTATGCATTCTCAAGGGCGTCTTTCCCCGGGATCCAAAGAAGAAGGTGGAAGGGAACCACAAGACCTACTACCACATGAAGGATATTGCCTTCCTGGCCCATGATCCCTTGATTGAGAAGTTTAGAGAAATCAAGGTCCACAGGAAGAAGGTCAAAAAGGCGTTTGCTAAGAAAAATAAAGATCTTGCAGACAGATTATTTGAACCGACCACC ACTTAC AACTTGACAGGCTTATCCTTGAAAGATATCCCACTTTTGGTTGATGCCCTTCGTGACTTGGAT ] [+] EMBL CB661683 [ CGCCGCCGCCGCCGCCATGCCGAAGCACTACCGGCCTGCGGGCAAGAAGAAGGAGGGGAACGCGGCGAAGTACATCACCAGGACCAAGGCGGTGAAGTACCTGCAGATTAGCCTCGCAACCTTCAGGAAGCTATGCATTCTCAAGGGCGTCTTTCCCCGGGATCCAAAGAAGAAGGTGGAAGGGAACCACAAGACCTACTACCACATGAAGGATATTGCCTTCCTGGCCCATGATCCCTTGATTGAGAAGTTTAGAGAAATCAAGGTCCACAGGAAGAAGGTCAAAAAGGCGTTTGCTAAGAAAAATAAAGATCTTGCAGACAGATTA TTGAACCGACCACCAACTTACAAACTTGACAGGCTTATTCTTGAAAGATATCCAACTTTT GTTGATGCTCTTCGTGACTTGGATGATTGCCTAACAATGGTGCATCTTTTTGCTGCGTTGCCTGCTGTTGAAGGTGAACGTGTGCAAGTTCAGCGGATTCATAATTGCCGCAGGTTGAGCCATGAATGGCAAGCATATATATCTCGAACTCATTCCCTGCGAAAGACATTTATATCCGTCAAGGGCATATATTATCAAGCTGAAGTTCAAGGTCAAAAGATCACCTGGCTAACTCCACATGCTCTTCAGCAAGTTTTAACTGATGACGTTGACTTCAATGTGATGCTTACCTTTTTGGAATTCTATGAGACACTTCTGGGATTTATANACTTCAAGCTTTACCATTCGATAAATGTAAATTATCCTCCTGTTCTGGATCCTCGTTTGGAAGCTTTAGCTTCTGAGCTCTATGCGTTGTGCCGGTACAT ] [+] EMBL OSS1803A [ AGAAATCAAGGTCCACAGGAAGAAGGTCAAAAAGGCGTTTGCTAAGAAAAATAAAGATCTTGCAGACAGATTA TTGAACCGACCACCAACTTACAAACTTGACAGGCTTATTCTTGAAAGATATCCAACTTTT GTTGATGCTCTTCGTGACTTGGATGATTGCCTAACAATGGTGCATCTTTTTGCTGCGTTGCCTGCTGTTGAAGGTGAACGTGTNCAAGTTCAGCGGATTCATAATTGCCGCA GTTGAGCCATGAATNGCAAGCATATATATCTCGAACTCATTCCCTGCGNAAGACATTTATATCCGTCAAGGGCATATATTATCAAGCTG ] [+] EMBL CB676948 [ ACCACCAACTTACAAACTTGACAGGCTTATTCTTGAAAGATATCCAACTTTT GTTGATGCTCTTCGTGACTTGGATGATTGCCTAACAATGGTGCATCTTTTTGCTGCGTTGCCTGCTGTTGAAGGTGAACGTGTGCAAGTTCAGCGGATTCATAATTGCCGCAGGTTGAGCCATGAATGGCAAGCATATATATCTCGAACTCATTCCCTGCGAAAGACATTTATATCCGTCAAGGGCATATATTATCAAGCTGAAGTTCAAGGTCAAAAGATCACCTGGCTAACTCCACATGCTCTTCAGCAAGTTTTAACTGATGACGTTGACTTCAATGTGATGCTTACCTTTTTGGAATTCTATGAGACACTTCTGGGATTTATAAACTTCAAGCTTTACCATTCGATAAATGTAAATTATCCTCCTGTTCTGGATCCTCGTTTGGAAGCTTTAGCTTCTGAGCTCTATGCGTTGTGCCGGTACATGTCTTCTGGAAGAGTACCTGGAAATTCAGAACCTGCTGGACTAATTGAAGACAAAGAGGGTGAAGACAATAAAGAGAGCTCAAAAACAGATGAGTCTGAACTCAGATTGGCACAACTTCAACACCAGCTCCCAACTAATGAACCTGGAGCGCTGATGCATCTTGTACAAGAATCTACTGCTGCTGATGCAGACGACGCTGATGCCAAAGAATGCAGGAGTTTATTCAAAAACCTGAAGTTCTACCTAAGTCGTGAGGTGCCTAGGGAATCTCTCTTATTTATCATTCCAGCATTTGGTGGTAC ] [+] EMBL CF324365 [ AAGCTTTAGCTTCTGAGCTCTATGCGTTGTGCCGGTACATGTCTTCTGGAAGAGTACCTGGAAATTCAGAACCTGCTGGACTAATTGAAGACAAAGAGGGTGAAGACAATAAAGAGAGCTCAAAAACAGATGAGTCTGAACTCAGATTGGCACAACTTCAACACCAGCTCCCAACTAATGAACCTGGAGCGCTGATGCATCTTGTACAAGAATCTACTGCTGCTGATGCAGACGACGCTGATGCCAAAGAATGCAGGAGTTTATTCAAAAACCTGAAGTTCTACCTAAGTCGTGAGGTGCCTAGGGAATCTCTCTTATTTATCATTCCAGCATTTGGTGGTACCGTTTCATGGGAAGGAGAAGGAGCTCCTTTTGATGAGACAGATGAAGACATCACTCATCAGATTGTTGATAGACCGACCCAAAGCCACGTTTTCCTCTCTAGGGAGTATGTTCAACCACAGTGGATATATGATTGCGTGAATGCTCGCATCATA ] [+] EMBL BP184840 [ AGGGTGAAGACAATAAAGAGAGCTCAAAAACAGATGAGTCTGAACTCAGATTGGCACAACTTCAACACCAGCTCCCAACTAATGAACCTGGAGCGCTGATGCATCTTGTACAAGAATCTACTGCTGCTGATGCAGACGACGCTGATGCCAAAGAATGCAGGAGTTTATTCAAAAACCTGAAGTTCTACCTAAGTCGTGAGGTGCCTAGGGAATCTCTCTTATTTATCATTCCAGCATTTGGTGGTACCGTTTCATGGGAAGGAGAAGGAGCTCCTTTTGATGAGACAGATGAAGACATCACTCATCAGATTGTTGATAGACCGACCCAAAGCCACGTTTTCCTCTCTAGGGAGTATGTTCAACCACAGTGGATATATGATTGCGTGAATGCTCGCATCATATTGCCGACAGAAGGTTATATTGTCGGGAGGGTGCCTCCACCACATTTATCTCCCTTTGTGGACAATGATGCAGAGGGTTACATTCCTGAGTATGCAGAGACCATTAAGAGGCTGCAAGCTGCTGCTCAAAGCCAGGTGTTTGCCTCTGCCAAGTTTAGGGGACGAAGATATGGAAAATTCACTGGTAGAGGCAATTATTGATCGATCAGAGTCTAATGAAATTGCTGACAAGAAG ] [+] EMBL BP184856 [ acgaggCTGGAGCGCTGATGCATCTTGTACAAGAATCTACTGCTGCTGATGCAGACGACGCTGATGCCAAAGAATGCAGGAGTTTATTCAAAAACCTGAAGTTCTACCTAAGTCGTGAGGTGCCTAGGGAATCTCTCTTATTTATCATTCCAGCATTTGGTGGTACCGTTTCATGGGAAGGAGAAGGAGCTCCTTTTGATGAGACAGATGAAGACATCACTCATCAGATTGTTGATAGACCGACCCAAAGCCACGTTTTCCTCTCTAGGGAGTATGTTCAACCACAGTGGATATATGATTGCGTGAATGCTCGCATCATATTGCCGACAGAAGGTTATATTGTCGGGAGGGTGCCTCCACCACATTTATCTCCCTTTGTGGACAATGATGCAGAGGGTTACATTCCTGAGTATGCAGAGACCATTAAGAGGCTGCAAGCTGCTGCTCAAAGCCAGGTG TTGCCTCTGCCAAGTTTAGGGGACGAAGATATGGAAAATTCACTGGTAGAGGCAATTATTGATCGATCAGAGTCTAATGAAATTGCTGACAAGAAGAGGAAGTTGGAGATGCTAGAGAAGCAGTACCACGATGAGCTGAGGATGGAATACGAAGGAAAGACCTTCTCAAATAGGACGGCAGATAACCAACCAGATGTTGTGGACAAAAGTGATACTAAAGAAGCTGACGATCATAT ] [+] EMBL AU097063 [ CATTGATGCAGAGGNTTACATTCCTGAGTATGCAGAGNCCATTAAGAGGCTGCAAGCTGCTGCTCAAAGCCAGGTG TTGCCTCTGCCAAGTTTAGGGGACGAAGATATGGAAAATTCACTGGTAGAGGCAATTATTGATCGATCAGAGTCTAATGAAATTGCTGACAAGAAGAGGAAGTTGGAGATGCTAGAGAAGCAGTACCACGATGAGCTGAGGATGGAATACGAAGGAAAGACCTTCTCAAATAGGACGGCAGATAACCAACCAGATGTTGTGGACAAAAGTGATACTAAAGAAGCTGACGATCATATGGAGGACTCTCATAAACAAGCCGAGAAGGATGCTGCTGACATTTCCAAGACCCTTATGT CTCG CAAGCAGAGAGGCCTTCTTCAAGCAATTGAGATTAACCAGGAAAGGAAAAAGGACAAGGTGAACTTGCTGAAGAAAAGGAAAAAGAATGCTGATTCCAGTGCTTCGGCCAAAGGTCGCTGAGGCTCGAACTTCATTTGCTCCATGCTGTATCTGTTTTGACAAATTGTTCATCGGTCGCTGCTTCTGTGGAGTTGCTGCCATGATCTGCACACCTACGTATTCTTATGCATGATAAGCAGCTCCATTTTGATGTTTAGGTGTTTTACATGGGCTTTAAGAATATGCCCAGATACCTCAGTAGAAAATTTTGAGCTAaaaa ] [+] EMBL CA758249 [ GACCATTAAGAGGCTGCAAGCTGCTGCTCAAAGCCAGGTG TTGCCTCTGCCAAGTTTAGGGGACGAAGATATGGAAAATTCACTGGTAGAGGCAATTATTGATCGATCAGAGTCTAATGAAATTGCTGACAAGAAGAGGAAGTTGGAGATGCTAGAGAAGCAGTACCACGATGAGCTGAGGATGGAATACGAAGGAAAGACCTTCTCAAATAGGACGGCAGATAACCAACCAGATGTTGTGGACAAAAGTGATACTAAAGAAGCTGACGATCATATGGAGGACTCTCATAAACAAGCCGAGAAGGATGCTGCTGACATTTCCAAGACCCTTATGT CTCG CAAGCAGAGAGGCCTTCTTCAAGCAATTGAGATTAACCAGGAAAGGAAAAAGGACAAGGTGAACTTGCTGAAGAAAAGGAAAAAGAATGCTGATTCCAGTGCTTCGGCCAAAGGTCGCTGAGGCTCGAACTTCATTTGCTCCATGCTGTATCTGTTTTGACAAATTGTTCATCGGTCGCTGCTTCTGTGGAGTTGCTGCCATGATCTGCACACCTACGTATTCTTATGCATGATAAGCAGCTCCATTTTGATGTTTAGGTGTTTTACATGGGCTTTAAGAATATGCCCAGATACCTCAGTAGAAAATTTTGAGCTATTTACCTAGTGTCCAAAGTGTGTTCCCTGATGATTAGTAGCTATTACTCTTCCAAATTTTGACGCGGTTGCTGCTCAAGTGCTCATCTAGCTACATAATTCTTAATCAGGAGTTTAGGGCCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN] [+] EMBL BP184857 [ CCAACCAGATGTTGTGGACAAAAGTGATACTAAAGAAGCTGACGATCATATGGAGGACTCTCATAAACAAGCCGAGAAGGATGCTGCTGACATTTCCAAGACCCTTATGT CTCG CAAGCAGAGAGGCCTTCTTCAAGCAATTGAGATTAACCAGGAAAGGAAAAAGGACAAGGTGAACTTGCTGAAGAAAAGGAAAAAGAATGCTGATTCCAGTGCTTCGGCCAAAGGTCGCTGAGGCTCGAACTTCATTTGCTCCATGCTGTATCTGTTTTGACAAATTGTTCATCGGTCGCTGCTTCTGTGGAGTTGCTGCCATGATCTGCACACCTACGTATTCTTATGCATGATAAGCAGCTCCATTTTGATGTTTAGGTGTTTTACATGGGCTTTAAGAATATGCCCAGATACCTCAGTAGAAAATTTTGAGCTATTTACCTAGTGTCCAAAGTGTGTTCCCTGATGATTAGTAGCTATTACTCTTCCAAATTaaaaaaaaa ] [+] EMBL AU101189 [ GTGGACAANAGTGATACTAAAGAAGCTGACGATCATATGGAGGACTCTCATANACAAGCCGAGANGGATGCTGCTGACATTTCCAAGACCCTTATGTNCTCGTCAAGCAGAGAGGCCTTCTTCAAGCAATTGAGATTAACCAGGAAAGGAANAAGGACAAGGTGAACTTGCTGAAGAAAAGGAAAAAGAATGCTGATTCCAGTGCTTCGGCCAAAGGTCGCTGAGGCTCGAACTTCATTTGCTCCATGCTGTATCTGTTTTGACAAATTGTTCATCGGTCGCTGCTTCTGTGGAGTTGCTGCCATGATCTGCACACCTACGTATTCTTATGCATGATAAGCAGCTCCATTTTGATGTTTAGGTGTTTTACATGGGCTTTAAGAATATGCCCAGATACCTCAGTAGAAAATTTTGAGCTAaaaaa ] consensusID : consensus_14603#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 591 fasta sequence [GCACGAGGGTGATACTAAAGAAGCTGACGATCATATGGAGGACTCTCATAAACAAGCCGAGAAGGATGCTGCTGACATTTCCAAGACCCTTATGTCTCGCAAGCAGAGAGGCCTTCTTCAAGCAATTGAGATTAACCAGGAAAGGAAAAAGGACAAGGTGAACTTGCTGAAGAAAAGGAAAAAGAATGCTGATTCCAGTGCTTCGGCCAAAGGTCGCTGAGGCTCGAACTTCATTTGCTCCATGCTGTATCTGTTTTGACAAATTGTTCATCGGTCGCTGCTTCTGTGGAGTTGCTGCCATGATCAGCACACCTACGTATTCTTATGCATGATAAGCAGCTCCATTTTGATGTTTAGGTGTTTTACATGGGCTTTAAGAATATGCCCAGATACCTCAGTAGAAAATTTTGAGCTATTTACCTAGTGTCCAAAGTGTGTTCCCTGATGATTAGTAGCTATTACTCTTCCAAATTTTGACGCGGTTGCTGCTCAAGTGCTCATCTAGCTACACAATTCTCAATCAGGAGTTTAGGGCCTGATATCTGTTGGCCGGTTGGTGATGCTGCAAAATGCAACATGATGAGTTGATGG] [-] EMBL CB965233 [GCACGAGGGTGATACTAAAGAAGCTGACGATCATATGGAGGACTCTCATAAACAAGCCGAGAAGTATGCTGCTGACATTTCCAAGACCCTTATGTCTCGCAAGCAGAGAGGCCTTCTTCAAGCAATTGAGATTAACCAGGAAAGGAAAAAGGACAAGGTGAACTTGCTGAAGAAAAGGAAAAAGAATGCTGATTCCAGTGCTTCGGCCAAAGGTCGCTGAGGCTCGAACTTCATTTGCTCCATGCTGTATCTGTTTTGACAAATTGTTCATCGGTCGCTGCTTCTGTGGAGTTGCTGCCATGATCAGCACACCTACGTATTCTTATGCATGATAAGCAGCTCCATTTTGATGTTTAGGTGTTTTACATGGGCTTTAAGAATATGCCCAGATACCTCAGTAGAAAATTTTGAGCTATTTACCTAGTGTCCAAAGTGTGTTCCCTGATGATTAGTAGCTATTACTCTTCCAAATTTTGACGCGGTTGCTGCTCAAGTGCTCATCTAGCTACACAATTCTCAATCAGGAGTTTAGGGCCTGATATCTGTTGGCCGGTTGGTGATGCTGCAAAATGCAACATGATGAGTTGATGG] [-] EMBL CB966842 [ AGAAGCTGACGATCATATGGAGGACTCTCATAAACAAGCCGAGAAGGATGCTGCTGACATTTCCAAGACCCTTATGTCTCGCAAGCAGAGAGGCCTTCTTCAAGCAATTGAGATTAACCAGGAAAGGAAAAAGGACAAGGTGAACTTGCTGAAGAAAAGGAAAAAGAATGCTGATTCCAGTGCTTCGGCCAAAGGTCGCTGAGGCTCGAACTTCATTTGCTCCATGCTGTATCTGTTTTGACAAATTGTTCATCGGTCGCTGCTTCTGTGGAGTTGCTGCCATGATCAGCACACCTACGTATTCTTATGCATGATAAGCAGCTCCATTTTGATGTTTAGGTGTTTTACATGGGCTTTAAGAATATGCCCAGATACCTCAGTAGAAAATTTTGAGCTATTTACCTAGTGTCCAAAGTGTGTTCCCTGATGATTAGTAGCTATTACTCTTCCAAATTTTGACGCGGTTGCTGCTCAAGTGCTCATCTAGCTACACAATTCTCAATCAGGAGTTTAGGGCCTGATATCTGTTGGCCGGTTGGTGATGCTGC AAATGCAACATGATGAGTTGATGG] [-] EMBL BU673797 [ AGAAGCTGACGATCATATGGAGGACTCTCATAAACAAGCCGAGAAGGATGCTGCTGACATTTCCAAGACCCTTATGTCTCGCAAGCAGAGAGGCCTTCTTCAAGCAATTGAGATTAACCAGGAAAGGAAAAAGGACAAGGTGAACTTGCTGAAGAAAAGGAAAAAGAATGCTGATTCCAGTGCTTCGGCCAAAGGTCGCTGAGGCTCGAACTTCATTTGCTCCATGCTGTATCTGTTTTGACAAATTGTTCATCGGTCGCTGCTTCTGTGGAGTTGCTGCCATGATCAGCACACCTACGTATTCTTATGCATGATAAGCAGCTCCATTTTGATGTTTAGGTGTTTTACATGGGCTTTAAGAATATGCCCAGATACCTCAGTAGAAAATTTTGAGCTATTTACCTAGTGTCCAAAGTGTGTTCCCTGATGATTAGTAGCTATTACTCTTCCAAATTTTGACGCGGTTGCTGCTCAAGTGCTCATCTAGCTACACAATTCTCAATCAGGAGTTTAGGGCCTGATATCTGTTGGCCGGTTGGTGATGCTGCAAAATGCAACATGAT ] [-] EMBL CB964705 [ AGAAGCTGACGATCATATGGAGGACTCTCATAAACGAGCCGAGAAGGATGCTGCTGACATTTCCAAGACCCTTATGTCTCGCAAGCAGAGAGGCCTTCTTCAAGCAATTGAGATTAACCAGGAAAGGAAAAAGGACAAGGTGAACTTGCTGAAGAAAAGGAAAAAGAATGCTGATTCCAGTGCTTCGGCCAAAGGTCGCTGAGGCTCGAACTTCATTTGCTCCATGCTGTATCTGTTTTGACAAATTGTTCATCGGTCGCTGCTTCTGTGGAGTTGCTGCCATGATCAGCACACCTACGTATTCTTATGCATGATAAGCAGCTCCATTTTGATGTTTAGGTGTTTTACATGGGCTTTAAGAATATGCCCAGATACCTCAGTAGAAAATTTTGAGCTATTTACCTAGTGTCCAAAGTGTGTTCCCTGATGATTAGTAGCTATTACTCTTCCAAATTTTGACGCGGTTGCTGCTCAAGTGCTCATCTAGCTACACAATTCTCAATCAGGAGTTTAGGGCCTGATATCTGTTGGCCGGTTGGTGATGCTGC AAATGCAACATGAT ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14603#0 CCTCTCCTTTCCCCCGCTCCCCTTCCCCGAGGAGCCACGCCGCCGCCGCCGCCGCCGCCA 60 consensus_14603#1 ------------------------------------------------------------ consensus_14603#0 TGCCGAAGCACTACCGGCCTGCGGGCAAGAAGAAGGAGGGGAACGCGGCGAAGTACATCA 120 consensus_14603#1 ------------------------------------------------------------ consensus_14603#0 CCAGGACCAAGGCGGTGAAGTACCTGCAGATTAGCCTCGCAACCTTCAGGAAGCTATGCA 180 consensus_14603#1 ------------------------------------------------------------ consensus_14603#0 TTCTCAAGGGCGTCTTTCCCCGGGATCCAAAGAAGAAGGTGGAAGGGAACCACAAGACCT 240 consensus_14603#1 ------------------------------------------------------------ consensus_14603#0 ACTACCACATGAAGGATATTGCCTTCCTGGCCCATGATCCCTTGATTGAGAAGTTTAGAG 300 consensus_14603#1 ------------------------------------------------------------ consensus_14603#0 AAATCAAGGTCCACAGGAAGAAGGTCAAAAAGGCGTTTGCTAAGAAAAATAAAGATCTTG 360 consensus_14603#1 ------------------------------------------------------------ consensus_14603#0 CAGACAGATTATTGAACCGACCACCAACTTACAAACTTGACAGGCTTATTCTTGAAAGAT 420 consensus_14603#1 ------------------------------------------------------------ consensus_14603#0 ATCCAACTTTTGTTGATGCTCTTCGTGACTTGGATGATTGCCTAACAATGGTGCATCTTT 480 consensus_14603#1 ------------------------------------------------------------ consensus_14603#0 TTGCTGCGTTGCCTGCTGTTGAAGGTGAACGTGTGCAAGTTCAGCGGATTCATAATTGCC 540 consensus_14603#1 ------------------------------------------------------------ consensus_14603#0 GCAGGTTGAGCCATGAATGGCAAGCATATATATCTCGAACTCATTCCCTGCGAAAGACAT 600 consensus_14603#1 ------------------------------------------------------------ consensus_14603#0 TTATATCCGTCAAGGGCATATATTATCAAGCTGAAGTTCAAGGTCAAAAGATCACCTGGC 660 consensus_14603#1 ------------------------------------------------------------ consensus_14603#0 TAACTCCACATGCTCTTCAGCAAGTTTTAACTGATGACGTTGACTTCAATGTGATGCTTA 720 consensus_14603#1 ------------------------------------------------------------ consensus_14603#0 CCTTTTTGGAATTCTATGAGACACTTCTGGGATTTATAAACTTCAAGCTTTACCATTCGA 780 consensus_14603#1 ------------------------------------------------------------ consensus_14603#0 TAAATGTAAATTATCCTCCTGTTCTGGATCCTCGTTTGGAAGCTTTAGCTTCTGAGCTCT 840 consensus_14603#1 ------------------------------------------------------------ consensus_14603#0 ATGCGTTGTGCCGGTACATGTCTTCTGGAAGAGTACCTGGAAATTCAGAACCTGCTGGAC 900 consensus_14603#1 ------------------------------------------------------------ consensus_14603#0 TAATTGAAGACAAAGAGGGTGAAGACAATAAAGAGAGCTCAAAAACAGATGAGTCTGAAC 960 consensus_14603#1 ------------------------------------------------------------ consensus_14603#0 TCAGATTGGCACAACTTCAACACCAGCTCCCAACTAATGAACCTGGAGCGCTGATGCATC 1020 consensus_14603#1 ------------------------------------------------------------ consensus_14603#0 TTGTACAAGAATCTACTGCTGCTGATGCAGACGACGCTGATGCCAAAGAATGCAGGAGTT 1080 consensus_14603#1 ------------------------------------------------------------ consensus_14603#0 TATTCAAAAACCTGAAGTTCTACCTAAGTCGTGAGGTGCCTAGGGAATCTCTCTTATTTA 1140 consensus_14603#1 ------------------------------------------------------------ consensus_14603#0 TCATTCCAGCATTTGGTGGTACCGTTTCATGGGAAGGAGAAGGAGCTCCTTTTGATGAGA 1200 consensus_14603#1 ------------------------------------------------------------ consensus_14603#0 CAGATGAAGACATCACTCATCAGATTGTTGATAGACCGACCCAAAGCCACGTTTTCCTCT 1260 consensus_14603#1 ------------------------------------------------------------ consensus_14603#0 CTAGGGAGTATGTTCAACCACAGTGGATATATGATTGCGTGAATGCTCGCATCATATTGC 1320 consensus_14603#1 ------------------------------------------------------------ consensus_14603#0 CGACAGAAGGTTATATTGTCGGGAGGGTGCCTCCACCACATTTATCTCCCTTTGTGGACA 1380 consensus_14603#1 ------------------------------------------------------------ consensus_14603#0 ATGATGCAGAGGGTTACATTCCTGAGTATGCAGAGACCATTAAGAGGCTGCAAGCTGCTG 1440 consensus_14603#1 ------------------------------------------------------------ consensus_14603#0 CTCAAAGCCAGGTGTTGCCTCTGCCAAGTTTAGGGGACGAAGATATGGAAAATTCACTGG 1500 consensus_14603#1 ------------------------------------------------------------ consensus_14603#0 TAGAGGCAATTATTGATCGATCAGAGTCTAATGAAATTGCTGACAAGAAGAGGAAGTTGG 1560 consensus_14603#1 ------------------------------------------------------------ consensus_14603#0 AGATGCTAGAGAAGCAGTACCACGATGAGCTGAGGATGGAATACGAAGGAAAGACCTTCT 1620 consensus_14603#1 ------------------------------------------------------------ consensus_14603#0 CAAATAGGACGGCAGATAACCAACCAGATGTTGTGGACAAAAGTGATACTAAAGAAGCTG 1680 consensus_14603#1 ----------------------------------GCACGAGGGTGATACTAAAGAAGCTG 26 * ** * ****************** consensus_14603#0 ACGATCATATGGAGGACTCTCATAAACAAGCCGAGAAGGATGCTGCTGACATTTCCAAGA 1740 consensus_14603#1 ACGATCATATGGAGGACTCTCATAAACAAGCCGAGAAGGATGCTGCTGACATTTCCAAGA 86 ************************************************************ consensus_14603#0 CCCTTATGTCTCGCAAGCAGAGAGGCCTTCTTCAAGCAATTGAGATTAACCAGGAAAGGA 1800 consensus_14603#1 CCCTTATGTCTCGCAAGCAGAGAGGCCTTCTTCAAGCAATTGAGATTAACCAGGAAAGGA 146 ************************************************************ consensus_14603#0 AAAAGGACAAGGTGAACTTGCTGAAGAAAAGGAAAAAGAATGCTGATTCCAGTGCTTCGG 1860 consensus_14603#1 AAAAGGACAAGGTGAACTTGCTGAAGAAAAGGAAAAAGAATGCTGATTCCAGTGCTTCGG 206 ************************************************************ consensus_14603#0 CCAAAGGTCGCTGAGGCTCGAACTTCATTTGCTCCATGCTGTATCTGTTTTGACAAATTG 1920 consensus_14603#1 CCAAAGGTCGCTGAGGCTCGAACTTCATTTGCTCCATGCTGTATCTGTTTTGACAAATTG 266 ************************************************************ consensus_14603#0 TTCATCGGTCGCTGCTTCTGTGGAGTTGCTGCCATGATCTGCACACCTACGTATTCTTAT 1980 consensus_14603#1 TTCATCGGTCGCTGCTTCTGTGGAGTTGCTGCCATGATCAGCACACCTACGTATTCTTAT 326 *************************************** ******************** consensus_14603#0 GCATGATAAGCAGCTCCATTTTGATGTTTAGGTGTTTTACATGGGCTTTAAGAATATGCC 2040 consensus_14603#1 GCATGATAAGCAGCTCCATTTTGATGTTTAGGTGTTTTACATGGGCTTTAAGAATATGCC 386 ************************************************************ consensus_14603#0 CAGATACCTCAGTAGAAAATTTTGAGCTATTTACCTAGTGTCCAAAGTGTGTTCCCTGAT 2100 consensus_14603#1 CAGATACCTCAGTAGAAAATTTTGAGCTATTTACCTAGTGTCCAAAGTGTGTTCCCTGAT 446 ************************************************************ consensus_14603#0 GATTAGTAGCTATTACTCTTCCAAATTTTGACGCGGTTGCTGCTCAAGTGCTCATCTAGC 2160 consensus_14603#1 GATTAGTAGCTATTACTCTTCCAAATTTTGACGCGGTTGCTGCTCAAGTGCTCATCTAGC 506 ************************************************************ consensus_14603#0 TACATAATTCTTAATCAGGAGTTTAGGGCCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNN 2220 consensus_14603#1 TACACAATTCTCAATCAGGAGTTTAGGGCCTGATATCTGTTGGCCGGTTGGTGATGCTGC 566 **** ****** ******************** consensus_14603#0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 2267 consensus_14603#1 AAAATGCAACATGATGAGTTGATGG---------------------- 591 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||