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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14603#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 2267 fasta sequence
[CCTCTCCTTTCCCCCGCTCCCCTTCCCCGAGGAGCCACGCCGCCGCCGCCGCCGCCGCCATGCCGAAGCACTACCGGCCTGCGGGCAAGAAGAAGGAGGGGAACGCGGCGAAGTACATCACCAGGACCAAGGCGGTGAAGTACCTGCAGATTAGCCTCGCAACCTTCAGGAAGCTATGCATTCTCAAGGGCGTCTTTCCCCGGGATCCAAAGAAGAAGGTGGAAGGGAACCACAAGACCTACTACCACATGAAGGATATTGCCTTCCTGGCCCATGATCCCTTGATTGAGAAGTTTAGAGAAATCAAGGTCCACAGGAAGAAGGTCAAAAAGGCGTTTGCTAAGAAAAATAAAGATCTTGCAGACAGATTA-TTGAACCGACCACCAACTTACAAACTTGACAGGCTTATTCTTGAAAGATATCCAACTTTT-GTTGATGCTCTTCGTGACTTGGATGATTGCCTAACAATGGTGCATCTTTTTGCTGCGTTGCCTGCTGTTGAAGGTGAACGTGTGCAAGTTCAGCGGATTCATAATTGCCGCAGGTTGAGCCATGAATGGCAAGCATATATATCTCGAACTCATTCCCTGCGAAAGACATTTATATCCGTCAAGGGCATATATTATCAAGCTGAAGTTCAAGGTCAAAAGATCACCTGGCTAACTCCACATGCTCTTCAGCAAGTTTTAACTGATGACGTTGACTTCAATGTGATGCTTACCTTTTTGGAATTCTATGAGACACTTCTGGGATTTATAAACTTCAAGCTTTACCATTCGATAAATGTAAATTATCCTCCTGTTCTGGATCCTCGTTTGGAAGCTTTAGCTTCTGAGCTCTATGCGTTGTGCCGGTACATGTCTTCTGGAAGAGTACCTGGAAATTCAGAACCTGCTGGACTAATTGAAGACAAAGAGGGTGAAGACAATAAAGAGAGCTCAAAAACAGATGAGTCTGAACTCAGATTGGCACAACTTCAACACCAGCTCCCAACTAATGAACCTGGAGCGCTGATGCATCTTGTACAAGAATCTACTGCTGCTGATGCAGACGACGCTGATGCCAAAGAATGCAGGAGTTTATTCAAAAACCTGAAGTTCTACCTAAGTCGTGAGGTGCCTAGGGAATCTCTCTTATTTATCATTCCAGCATTTGGTGGTACCGTTTCATGGGAAGGAGAAGGAGCTCCTTTTGATGAGACAGATGAAGACATCACTCATCAGATTGTTGATAGACCGACCCAAAGCCACGTTTTCCTCTCTAGGGAGTATGTTCAACCACAGTGGATATATGATTGCGTGAATGCTCGCATCATATTGCCGACAGAAGGTTATATTGTCGGGAGGGTGCCTCCACCACATTTATCTCCCTTTGTGGACAATGATGCAGAGGGTTACATTCCTGAGTATGCAGAGACCATTAAGAGGCTGCAAGCTGCTGCTCAAAGCCAGGTG-TTGCCTCTGCCAAGTTTAGGGGACGAAGATATGGAAAATTCACTGGTAGAGGCAATTATTGATCGATCAGAGTCTAATGAAATTGCTGACAAGAAGAGGAAGTTGGAGATGCTAGAGAAGCAGTACCACGATGAGCTGAGGATGGAATACGAAGGAAAGACCTTCTCAAATAGGACGGCAGATAACCAACCAGATGTTGTGGACAAAAGTGATACTAAAGAAGCTGACGATCATATGGAGGACTCTCATAAACAAGCCGAGAAGGATGCTGCTGACATTTCCAAGACCCTTATGT-CTCG-CAAGCAGAGAGGCCTTCTTCAAGCAATTGAGATTAACCAGGAAAGGAAAAAGGACAAGGTGAACTTGCTGAAGAAAAGGAAAAAGAATGCTGATTCCAGTGCTTCGGCCAAAGGTCGCTGAGGCTCGAACTTCATTTGCTCCATGCTGTATCTGTTTTGACAAATTGTTCATCGGTCGCTGCTTCTGTGGAGTTGCTGCCATGATCTGCACACCTACGTATTCTTATGCATGATAAGCAGCTCCATTTTGATGTTTAGGTGTTTTACATGGGCTTTAAGAATATGCCCAGATACCTCAGTAGAAAATTTTGAGCTATTTACCTAGTGTCCAAAGTGTGTTCCCTGATGATTAGTAGCTATTACTCTTCCAAATTTTGACGCGGTTGCTGCTCAAGTGCTCATCTAGCTACATAATTCTTAATCAGGAGTTTAGGGCCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN]
[+] EMBL AK066652 [CCTCTCCTTTCCCCCGCTCCCCTTCCCCGAGGAGCCACGCCGCCGCCGCCGCCGCCGCCATGCCGAAGCACTACCGGCCTGCGGGCAAGAAGAAGGAGGGGAACGCGGCGAAGTACATCACCAGGACCAAGGCGGTGAAGTACCTGCAGATTAGCCTCGCAACCTTCAGGAAGCTATGCATTCTCAAGGGCGTCTTTCCCCGGGATCCAAAGAAGAAGGTGGAAGGGAACCACAAGACCTACTACCACATGAAGGATATTGCCTTCCTGGCCCATGATCCCTTGATTGAGAAGTTTAGAGAAATCAAGGTCCACAGGAAGAAGGTCAAAAAGGCGTTTGCTAAGAAAAATAAAGATCTTGCAGACAGATTA TTGAACCGACCACCAACTTACAAACTTGACAGGCTTATTCTTGAAAGATATCCAACTTTT GTTGATGCTCTTCGTGACTTGGATGATTGCCTAACAATGGTGCATCTTTTTGCTGCGTTGCCTGCTGTTGAAGGTGAACGTGTGCAAGTTCAGCGGATTCATAATTGCCGCAGGTTGAGCCATGAATGGCAAGCATATATATCTCGAACTCATTCCCTGCGAAAGACATTTATATCCGTCAAGGGCATATATTATCAAGCTGAAGTTCAAGGTCAAAAGATCACCTGGCTAACTCCACATGCTCTTCAGCAAGTTTTAACTGATGACGTTGACTTCAATGTGATGCTTACCTTTTTGGAATTCTATGAGACACTTCTGGGATTTATAAACTTCAAGCTTTACCATTCGATAAATGTAAATTATCCTCCTGTTCTGGATCCTCGTTTGGAAGCTTTAGCTTCTGAGCTCTATGCGTTGTGCCGGTACATGTCTTCTGGAAGAGTACCTGGAAATTCAGAACCTGCTGGACTAATTGAAGACAAAGAGGGTGAAGACAATAAAGAGAGCTCAAAAACAGATGAGTCTGAACTCAGATTGGCACAACTTCAACACCAGCTCCCAACTAATGAACCTGGAGCGCTGATGCATCTTGTACAAGAATCTACTGCTGCTGATGCAGACGACGCTGATGCCAAAGAATGCAGGAGTTTATTCAAAAACCTGAAGTTCTACCTAAGTCGTGAGGTGCCTAGGGAATCTCTCTTATTTATCATTCCAGCATTTGGTGGTACCGTTTCATGGGAAGGAGAAGGAGCTCCTTTTGATGAGACAGATGAAGACATCACTCATCAGATTGTTGATAGACCGACCCAAAGCCACGTTTTCCTCTCTAGGGAGTATGTTCAACCACAGTGGATATATGATTGCGTGAATGCTCGCATCATATTGCCGACAGAAGGTTATATTGTCGGGAGGGTGCCTCCACCACATTTATCTCCCTTTGTGGACAATGATGCAGAGGGTTACATTCCTGAGTATGCAGAGACCATTAAGAGGCTGCAAGCTGCTGCTCAAAGCCAGGTG TTGCCTCTGCCAAGTTTAGGGGACGAAGATATGGAAAATTCACTGGTAGAGGCAATTATTGATCGATCAGAGTCTAATGAAATTGCTGACAAGAAGAGGAAGTTGGAGATGCTAGAGAAGCAGTACCACGATGAGCTGAGGATGGAATACGAAGGAAAGACCTTCTCAAATAGGACGGCAGATAACCAACCAGATGTTGTGGACAAAAGTGATACTAAAGAAGCTGACGATCATATGGAGGACTCTCATAAACAAGCCGAGAAGGATGCTGCTGACATTTCCAAGACCCTTATGT CTCG CAAGCAGAGAGGCCTTCTTCAAGCAATTGAGATTAACCAGGAAAGGAAAAAGGACAAGGTGAACTTGCTGAAGAAAAGGAAAAAGAATGCTGATTCCAGTGCTTCGGCCAAAGGTCGCTGAGGCTCGGACTTCATTTGCTCCATGCTGTATCTGTTTTGACAAATTGTTCATCGGTCGCTGCTTCTGTGGAGTTGCTGCCATGATCTGCACACCTACGTATTCTTATGCATGATAAGCAGCTCCATTTTGATGTTTAGGTGTTTTACATGGGCTTTAAGAATATGCCCAGATACCTCAGTAGAAAATTTTGAGCTATTTACCTAGTGTCCAAAGTGTGTTCCCTGATGATTAGTAGCTATTACTCTTCCAAATTTTGACGCGGTTGCTGCTCAAGTGCTCATCTAGCTACATAATTCTTAATCAGGA ]
[+] EMBL AK099383 [CCTCTCCTTTCCCCCGCTCCCCTTCCCCGAGGAGCCACGCCGCCGCCGCCGCCGCCGCCATGCCGAAGCACTACCGGCCTGCGGGCAAGAAGAAGGAGGGGAACGCGGCGAAGTACATCACCAGGACCAAGGCGGTGAAGTACCTGCAGATTAGCCTCGCAACCTTCAGGAAGCTATGCATTCTCAAGGGCGTCTTTCCCCGGGATCCAAAGAAGAAGGTGGAAGGGAACCACAAGACCTACTACCACATGAAGGATATTGCCTTCCTGGCCCATGATCCCTTGATTGAGAAGTTTAGAGAAATCAAGGTCCACAGGAAGAAGGTCAAAAAGGCGTTTGCTAAGAAAAATAAAGATCTTGCAGACAGATTA TTGAACCGACCACCAACTTACAAACTTGACAGGCTTATTCTTGAAAGATATCCAACTTTT GTTGATGCTCTTCGTGACTTGGATGATTGCCTAACAATGGTGCATCTTTTTGCTGCGTTGCCTGCTGTTGAAGGTGAACGTGTGCAAGTTCAGCGGATTCATAATTGCCGCAGGTTGAGCCATGAATGGCAAGCATATATATCTCGAACTCATTCCCTGCGAAAGACATTTATATCCGTCAAGGGCATATATTATCAAGCTGAAGTTCAAGGTCAAAAGATCACCTGGCTAACTCCACATGCTCTTCAGCAAGTTTTAACTGATGACGTTGACTTCAATGTGATGCTTACCTTTTTGGAATTCTATGAGACACTTCTGGGATTTATAAACTTCAAGCTTTACCATTCGATAAATGTAAATTATCCTCCTGTTCTGGATCCTCGTTTGGAAGCTTTAGCTTCTGAGCTCTATGCGTTGTGCCGGTACATGTCTTCTGGAAGAGTACCTGGAAATTCAGAACCTGCTGGACTAATTGAAGACAAAGAGGGTGAAGACAATAAAGAGAGCTCAAAAACAGATGAGTCTGAACTCAGATTGGCACAACTTCAACACCAGCTCCCAACTAATGAACCTGGAGCGCTGATGCATCTTGTACAAGAATCTACTGCTGCTGATGCAGACGACGCTGATGCCAAAGAATGCAGGAGTTTATTCAAAAACCTGAAGTTCTACCTAAGTCGTGAGGTGCCTAGGGAATCTCTCTTATTTATCATTCCAGCATTTGGTGGTACCGTTTCATGGGAAGGAGAAGGAGCTCCTTTTGATGAGACAGATGAAGACATCACTCATCAGATTGTTGATAGACCGACCCAAAGCCACTTTTTCCTCTCTAGGGAGTATGTTCAACCACAGTGGATATATGATTGCGTGAATGCTCGCATCATATTGCCGACAGAAGGTTATATTGTCGGGAGGGTGCCTCCACCACATTTATCTCCCTTTGTGGACAATGATGCAGAGGGTTACATTCCTGAGTATGCAGAGACCATTAAGAGGCTGCAAGCTGCTGCTCAAAGCCAGGTG TTGCCTCTGCCAAGTTTAGGGGACGAAGATATGGAAAATTCACTGGTAGAGGCAATTATTGATCGATCAGAGTCTAATGAAATTGCTGACAAGAAGAGGAAGTTGGAGATGCTAGAGAAGCAGTACCACGATGAGCTGAGGATGGAATACGAAGGAAAGACCTTCTCAAATAGGACGGCAGATAACCAACCAGATGTTGTGGACAAAAGTGATACTAAAGAAGCTGACGATCATATGGAGGACTCTCATAAACAAGCCGAGAAGGATGCTCCTGACATTTCCAAGACCCTTATGT CTCG CAAGCAGAGAGGCCTTCTTCAAGCAATTGAGATTAACCAGGAAAGGAAAAAGGACAAGGTGAACTTGCTGAAGAAAAGGAAAAAGAATGCTGATTCCAGTGCTTCGGCCAAAGGTCGCTGAGGCTCGAACTTCATTTGCTCCATGCTGTATCTGTTTTGACAAATTGTTCATCGGTCGCTGCTTCTGTGGAGTTGCTGCCATGATCTGCACACCTACGTATTCTTATGCATGATAAGCAGCTCCATTTTGATGTTTAGGTGTTTTACATGGGCTTTAAGAATATGCCCAGATACCTCAGTAGAAAATTTTGAGCTATTTACCTAGTGTCCAAAGTGTGTTCCCTGATGATTAGTAGCTA ]
[+] EMBL C72881 [ CGCTCCCCTTCCCCGANGAGCCACGCCGCCGCCGCCGCCGCCGCCATGCCGAAGCACTACCGGCCTGCGGGCAAGAAGAAGGAGGGGAACGCNGCGAAGTACATCACCAGGACCAAGGCGGTGAAGTACCTGCAGATTAGCCTCGCAACCTTCAGGAAGCTATGCATTCTCAAGGGCGTCTTTCCCCGGGATCCAAAGAAGAAGGTGGAAGGGAACCACAAGACCTACTACCACATGAAGGATATTGCCTTCCTGGCCCATGATCCCTTGATTGAGAAGTTTAGAGAAATCAAGGTCCACAGGAAGAAGGTCAAAAAGGCGTTTGCTAAGAAAAATAAAGATCTTGCAGACAGATTATTTGAACCGACCACC ACTTAC AACTTGACAGGCTTATCCTTGAAAGATATCCCACTTTTGGTTGATGCCCTTCGTGACTTGGAT ]
[+] EMBL CB661683 [ CGCCGCCGCCGCCGCCATGCCGAAGCACTACCGGCCTGCGGGCAAGAAGAAGGAGGGGAACGCGGCGAAGTACATCACCAGGACCAAGGCGGTGAAGTACCTGCAGATTAGCCTCGCAACCTTCAGGAAGCTATGCATTCTCAAGGGCGTCTTTCCCCGGGATCCAAAGAAGAAGGTGGAAGGGAACCACAAGACCTACTACCACATGAAGGATATTGCCTTCCTGGCCCATGATCCCTTGATTGAGAAGTTTAGAGAAATCAAGGTCCACAGGAAGAAGGTCAAAAAGGCGTTTGCTAAGAAAAATAAAGATCTTGCAGACAGATTA TTGAACCGACCACCAACTTACAAACTTGACAGGCTTATTCTTGAAAGATATCCAACTTTT GTTGATGCTCTTCGTGACTTGGATGATTGCCTAACAATGGTGCATCTTTTTGCTGCGTTGCCTGCTGTTGAAGGTGAACGTGTGCAAGTTCAGCGGATTCATAATTGCCGCAGGTTGAGCCATGAATGGCAAGCATATATATCTCGAACTCATTCCCTGCGAAAGACATTTATATCCGTCAAGGGCATATATTATCAAGCTGAAGTTCAAGGTCAAAAGATCACCTGGCTAACTCCACATGCTCTTCAGCAAGTTTTAACTGATGACGTTGACTTCAATGTGATGCTTACCTTTTTGGAATTCTATGAGACACTTCTGGGATTTATANACTTCAAGCTTTACCATTCGATAAATGTAAATTATCCTCCTGTTCTGGATCCTCGTTTGGAAGCTTTAGCTTCTGAGCTCTATGCGTTGTGCCGGTACAT ]
[+] EMBL OSS1803A [ AGAAATCAAGGTCCACAGGAAGAAGGTCAAAAAGGCGTTTGCTAAGAAAAATAAAGATCTTGCAGACAGATTA TTGAACCGACCACCAACTTACAAACTTGACAGGCTTATTCTTGAAAGATATCCAACTTTT GTTGATGCTCTTCGTGACTTGGATGATTGCCTAACAATGGTGCATCTTTTTGCTGCGTTGCCTGCTGTTGAAGGTGAACGTGTNCAAGTTCAGCGGATTCATAATTGCCGCA GTTGAGCCATGAATNGCAAGCATATATATCTCGAACTCATTCCCTGCGNAAGACATTTATATCCGTCAAGGGCATATATTATCAAGCTG ]
[+] EMBL CB676948 [ ACCACCAACTTACAAACTTGACAGGCTTATTCTTGAAAGATATCCAACTTTT GTTGATGCTCTTCGTGACTTGGATGATTGCCTAACAATGGTGCATCTTTTTGCTGCGTTGCCTGCTGTTGAAGGTGAACGTGTGCAAGTTCAGCGGATTCATAATTGCCGCAGGTTGAGCCATGAATGGCAAGCATATATATCTCGAACTCATTCCCTGCGAAAGACATTTATATCCGTCAAGGGCATATATTATCAAGCTGAAGTTCAAGGTCAAAAGATCACCTGGCTAACTCCACATGCTCTTCAGCAAGTTTTAACTGATGACGTTGACTTCAATGTGATGCTTACCTTTTTGGAATTCTATGAGACACTTCTGGGATTTATAAACTTCAAGCTTTACCATTCGATAAATGTAAATTATCCTCCTGTTCTGGATCCTCGTTTGGAAGCTTTAGCTTCTGAGCTCTATGCGTTGTGCCGGTACATGTCTTCTGGAAGAGTACCTGGAAATTCAGAACCTGCTGGACTAATTGAAGACAAAGAGGGTGAAGACAATAAAGAGAGCTCAAAAACAGATGAGTCTGAACTCAGATTGGCACAACTTCAACACCAGCTCCCAACTAATGAACCTGGAGCGCTGATGCATCTTGTACAAGAATCTACTGCTGCTGATGCAGACGACGCTGATGCCAAAGAATGCAGGAGTTTATTCAAAAACCTGAAGTTCTACCTAAGTCGTGAGGTGCCTAGGGAATCTCTCTTATTTATCATTCCAGCATTTGGTGGTAC ]
[+] EMBL CF324365 [ AAGCTTTAGCTTCTGAGCTCTATGCGTTGTGCCGGTACATGTCTTCTGGAAGAGTACCTGGAAATTCAGAACCTGCTGGACTAATTGAAGACAAAGAGGGTGAAGACAATAAAGAGAGCTCAAAAACAGATGAGTCTGAACTCAGATTGGCACAACTTCAACACCAGCTCCCAACTAATGAACCTGGAGCGCTGATGCATCTTGTACAAGAATCTACTGCTGCTGATGCAGACGACGCTGATGCCAAAGAATGCAGGAGTTTATTCAAAAACCTGAAGTTCTACCTAAGTCGTGAGGTGCCTAGGGAATCTCTCTTATTTATCATTCCAGCATTTGGTGGTACCGTTTCATGGGAAGGAGAAGGAGCTCCTTTTGATGAGACAGATGAAGACATCACTCATCAGATTGTTGATAGACCGACCCAAAGCCACGTTTTCCTCTCTAGGGAGTATGTTCAACCACAGTGGATATATGATTGCGTGAATGCTCGCATCATA ]
[+] EMBL BP184840 [ AGGGTGAAGACAATAAAGAGAGCTCAAAAACAGATGAGTCTGAACTCAGATTGGCACAACTTCAACACCAGCTCCCAACTAATGAACCTGGAGCGCTGATGCATCTTGTACAAGAATCTACTGCTGCTGATGCAGACGACGCTGATGCCAAAGAATGCAGGAGTTTATTCAAAAACCTGAAGTTCTACCTAAGTCGTGAGGTGCCTAGGGAATCTCTCTTATTTATCATTCCAGCATTTGGTGGTACCGTTTCATGGGAAGGAGAAGGAGCTCCTTTTGATGAGACAGATGAAGACATCACTCATCAGATTGTTGATAGACCGACCCAAAGCCACGTTTTCCTCTCTAGGGAGTATGTTCAACCACAGTGGATATATGATTGCGTGAATGCTCGCATCATATTGCCGACAGAAGGTTATATTGTCGGGAGGGTGCCTCCACCACATTTATCTCCCTTTGTGGACAATGATGCAGAGGGTTACATTCCTGAGTATGCAGAGACCATTAAGAGGCTGCAAGCTGCTGCTCAAAGCCAGGTGTTTGCCTCTGCCAAGTTTAGGGGACGAAGATATGGAAAATTCACTGGTAGAGGCAATTATTGATCGATCAGAGTCTAATGAAATTGCTGACAAGAAG ]
[+] EMBL BP184856 [ acgaggCTGGAGCGCTGATGCATCTTGTACAAGAATCTACTGCTGCTGATGCAGACGACGCTGATGCCAAAGAATGCAGGAGTTTATTCAAAAACCTGAAGTTCTACCTAAGTCGTGAGGTGCCTAGGGAATCTCTCTTATTTATCATTCCAGCATTTGGTGGTACCGTTTCATGGGAAGGAGAAGGAGCTCCTTTTGATGAGACAGATGAAGACATCACTCATCAGATTGTTGATAGACCGACCCAAAGCCACGTTTTCCTCTCTAGGGAGTATGTTCAACCACAGTGGATATATGATTGCGTGAATGCTCGCATCATATTGCCGACAGAAGGTTATATTGTCGGGAGGGTGCCTCCACCACATTTATCTCCCTTTGTGGACAATGATGCAGAGGGTTACATTCCTGAGTATGCAGAGACCATTAAGAGGCTGCAAGCTGCTGCTCAAAGCCAGGTG TTGCCTCTGCCAAGTTTAGGGGACGAAGATATGGAAAATTCACTGGTAGAGGCAATTATTGATCGATCAGAGTCTAATGAAATTGCTGACAAGAAGAGGAAGTTGGAGATGCTAGAGAAGCAGTACCACGATGAGCTGAGGATGGAATACGAAGGAAAGACCTTCTCAAATAGGACGGCAGATAACCAACCAGATGTTGTGGACAAAAGTGATACTAAAGAAGCTGACGATCATAT ]
[+] EMBL AU097063 [ CATTGATGCAGAGGNTTACATTCCTGAGTATGCAGAGNCCATTAAGAGGCTGCAAGCTGCTGCTCAAAGCCAGGTG TTGCCTCTGCCAAGTTTAGGGGACGAAGATATGGAAAATTCACTGGTAGAGGCAATTATTGATCGATCAGAGTCTAATGAAATTGCTGACAAGAAGAGGAAGTTGGAGATGCTAGAGAAGCAGTACCACGATGAGCTGAGGATGGAATACGAAGGAAAGACCTTCTCAAATAGGACGGCAGATAACCAACCAGATGTTGTGGACAAAAGTGATACTAAAGAAGCTGACGATCATATGGAGGACTCTCATAAACAAGCCGAGAAGGATGCTGCTGACATTTCCAAGACCCTTATGT CTCG CAAGCAGAGAGGCCTTCTTCAAGCAATTGAGATTAACCAGGAAAGGAAAAAGGACAAGGTGAACTTGCTGAAGAAAAGGAAAAAGAATGCTGATTCCAGTGCTTCGGCCAAAGGTCGCTGAGGCTCGAACTTCATTTGCTCCATGCTGTATCTGTTTTGACAAATTGTTCATCGGTCGCTGCTTCTGTGGAGTTGCTGCCATGATCTGCACACCTACGTATTCTTATGCATGATAAGCAGCTCCATTTTGATGTTTAGGTGTTTTACATGGGCTTTAAGAATATGCCCAGATACCTCAGTAGAAAATTTTGAGCTAaaaa ]
[+] EMBL CA758249 [ GACCATTAAGAGGCTGCAAGCTGCTGCTCAAAGCCAGGTG TTGCCTCTGCCAAGTTTAGGGGACGAAGATATGGAAAATTCACTGGTAGAGGCAATTATTGATCGATCAGAGTCTAATGAAATTGCTGACAAGAAGAGGAAGTTGGAGATGCTAGAGAAGCAGTACCACGATGAGCTGAGGATGGAATACGAAGGAAAGACCTTCTCAAATAGGACGGCAGATAACCAACCAGATGTTGTGGACAAAAGTGATACTAAAGAAGCTGACGATCATATGGAGGACTCTCATAAACAAGCCGAGAAGGATGCTGCTGACATTTCCAAGACCCTTATGT CTCG CAAGCAGAGAGGCCTTCTTCAAGCAATTGAGATTAACCAGGAAAGGAAAAAGGACAAGGTGAACTTGCTGAAGAAAAGGAAAAAGAATGCTGATTCCAGTGCTTCGGCCAAAGGTCGCTGAGGCTCGAACTTCATTTGCTCCATGCTGTATCTGTTTTGACAAATTGTTCATCGGTCGCTGCTTCTGTGGAGTTGCTGCCATGATCTGCACACCTACGTATTCTTATGCATGATAAGCAGCTCCATTTTGATGTTTAGGTGTTTTACATGGGCTTTAAGAATATGCCCAGATACCTCAGTAGAAAATTTTGAGCTATTTACCTAGTGTCCAAAGTGTGTTCCCTGATGATTAGTAGCTATTACTCTTCCAAATTTTGACGCGGTTGCTGCTCAAGTGCTCATCTAGCTACATAATTCTTAATCAGGAGTTTAGGGCCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN]
[+] EMBL BP184857 [ CCAACCAGATGTTGTGGACAAAAGTGATACTAAAGAAGCTGACGATCATATGGAGGACTCTCATAAACAAGCCGAGAAGGATGCTGCTGACATTTCCAAGACCCTTATGT CTCG CAAGCAGAGAGGCCTTCTTCAAGCAATTGAGATTAACCAGGAAAGGAAAAAGGACAAGGTGAACTTGCTGAAGAAAAGGAAAAAGAATGCTGATTCCAGTGCTTCGGCCAAAGGTCGCTGAGGCTCGAACTTCATTTGCTCCATGCTGTATCTGTTTTGACAAATTGTTCATCGGTCGCTGCTTCTGTGGAGTTGCTGCCATGATCTGCACACCTACGTATTCTTATGCATGATAAGCAGCTCCATTTTGATGTTTAGGTGTTTTACATGGGCTTTAAGAATATGCCCAGATACCTCAGTAGAAAATTTTGAGCTATTTACCTAGTGTCCAAAGTGTGTTCCCTGATGATTAGTAGCTATTACTCTTCCAAATTaaaaaaaaa ]
[+] EMBL AU101189 [ GTGGACAANAGTGATACTAAAGAAGCTGACGATCATATGGAGGACTCTCATANACAAGCCGAGANGGATGCTGCTGACATTTCCAAGACCCTTATGTNCTCGTCAAGCAGAGAGGCCTTCTTCAAGCAATTGAGATTAACCAGGAAAGGAANAAGGACAAGGTGAACTTGCTGAAGAAAAGGAAAAAGAATGCTGATTCCAGTGCTTCGGCCAAAGGTCGCTGAGGCTCGAACTTCATTTGCTCCATGCTGTATCTGTTTTGACAAATTGTTCATCGGTCGCTGCTTCTGTGGAGTTGCTGCCATGATCTGCACACCTACGTATTCTTATGCATGATAAGCAGCTCCATTTTGATGTTTAGGTGTTTTACATGGGCTTTAAGAATATGCCCAGATACCTCAGTAGAAAATTTTGAGCTAaaaaa ]
consensusID : consensus_14603#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 591 fasta sequence
[GCACGAGGGTGATACTAAAGAAGCTGACGATCATATGGAGGACTCTCATAAACAAGCCGAGAAGGATGCTGCTGACATTTCCAAGACCCTTATGTCTCGCAAGCAGAGAGGCCTTCTTCAAGCAATTGAGATTAACCAGGAAAGGAAAAAGGACAAGGTGAACTTGCTGAAGAAAAGGAAAAAGAATGCTGATTCCAGTGCTTCGGCCAAAGGTCGCTGAGGCTCGAACTTCATTTGCTCCATGCTGTATCTGTTTTGACAAATTGTTCATCGGTCGCTGCTTCTGTGGAGTTGCTGCCATGATCAGCACACCTACGTATTCTTATGCATGATAAGCAGCTCCATTTTGATGTTTAGGTGTTTTACATGGGCTTTAAGAATATGCCCAGATACCTCAGTAGAAAATTTTGAGCTATTTACCTAGTGTCCAAAGTGTGTTCCCTGATGATTAGTAGCTATTACTCTTCCAAATTTTGACGCGGTTGCTGCTCAAGTGCTCATCTAGCTACACAATTCTCAATCAGGAGTTTAGGGCCTGATATCTGTTGGCCGGTTGGTGATGCTGCAAAATGCAACATGATGAGTTGATGG]
[-] EMBL CB965233 [GCACGAGGGTGATACTAAAGAAGCTGACGATCATATGGAGGACTCTCATAAACAAGCCGAGAAGTATGCTGCTGACATTTCCAAGACCCTTATGTCTCGCAAGCAGAGAGGCCTTCTTCAAGCAATTGAGATTAACCAGGAAAGGAAAAAGGACAAGGTGAACTTGCTGAAGAAAAGGAAAAAGAATGCTGATTCCAGTGCTTCGGCCAAAGGTCGCTGAGGCTCGAACTTCATTTGCTCCATGCTGTATCTGTTTTGACAAATTGTTCATCGGTCGCTGCTTCTGTGGAGTTGCTGCCATGATCAGCACACCTACGTATTCTTATGCATGATAAGCAGCTCCATTTTGATGTTTAGGTGTTTTACATGGGCTTTAAGAATATGCCCAGATACCTCAGTAGAAAATTTTGAGCTATTTACCTAGTGTCCAAAGTGTGTTCCCTGATGATTAGTAGCTATTACTCTTCCAAATTTTGACGCGGTTGCTGCTCAAGTGCTCATCTAGCTACACAATTCTCAATCAGGAGTTTAGGGCCTGATATCTGTTGGCCGGTTGGTGATGCTGCAAAATGCAACATGATGAGTTGATGG]
[-] EMBL CB966842 [ AGAAGCTGACGATCATATGGAGGACTCTCATAAACAAGCCGAGAAGGATGCTGCTGACATTTCCAAGACCCTTATGTCTCGCAAGCAGAGAGGCCTTCTTCAAGCAATTGAGATTAACCAGGAAAGGAAAAAGGACAAGGTGAACTTGCTGAAGAAAAGGAAAAAGAATGCTGATTCCAGTGCTTCGGCCAAAGGTCGCTGAGGCTCGAACTTCATTTGCTCCATGCTGTATCTGTTTTGACAAATTGTTCATCGGTCGCTGCTTCTGTGGAGTTGCTGCCATGATCAGCACACCTACGTATTCTTATGCATGATAAGCAGCTCCATTTTGATGTTTAGGTGTTTTACATGGGCTTTAAGAATATGCCCAGATACCTCAGTAGAAAATTTTGAGCTATTTACCTAGTGTCCAAAGTGTGTTCCCTGATGATTAGTAGCTATTACTCTTCCAAATTTTGACGCGGTTGCTGCTCAAGTGCTCATCTAGCTACACAATTCTCAATCAGGAGTTTAGGGCCTGATATCTGTTGGCCGGTTGGTGATGCTGC AAATGCAACATGATGAGTTGATGG]
[-] EMBL BU673797 [ AGAAGCTGACGATCATATGGAGGACTCTCATAAACAAGCCGAGAAGGATGCTGCTGACATTTCCAAGACCCTTATGTCTCGCAAGCAGAGAGGCCTTCTTCAAGCAATTGAGATTAACCAGGAAAGGAAAAAGGACAAGGTGAACTTGCTGAAGAAAAGGAAAAAGAATGCTGATTCCAGTGCTTCGGCCAAAGGTCGCTGAGGCTCGAACTTCATTTGCTCCATGCTGTATCTGTTTTGACAAATTGTTCATCGGTCGCTGCTTCTGTGGAGTTGCTGCCATGATCAGCACACCTACGTATTCTTATGCATGATAAGCAGCTCCATTTTGATGTTTAGGTGTTTTACATGGGCTTTAAGAATATGCCCAGATACCTCAGTAGAAAATTTTGAGCTATTTACCTAGTGTCCAAAGTGTGTTCCCTGATGATTAGTAGCTATTACTCTTCCAAATTTTGACGCGGTTGCTGCTCAAGTGCTCATCTAGCTACACAATTCTCAATCAGGAGTTTAGGGCCTGATATCTGTTGGCCGGTTGGTGATGCTGCAAAATGCAACATGAT ]
[-] EMBL CB964705 [ AGAAGCTGACGATCATATGGAGGACTCTCATAAACGAGCCGAGAAGGATGCTGCTGACATTTCCAAGACCCTTATGTCTCGCAAGCAGAGAGGCCTTCTTCAAGCAATTGAGATTAACCAGGAAAGGAAAAAGGACAAGGTGAACTTGCTGAAGAAAAGGAAAAAGAATGCTGATTCCAGTGCTTCGGCCAAAGGTCGCTGAGGCTCGAACTTCATTTGCTCCATGCTGTATCTGTTTTGACAAATTGTTCATCGGTCGCTGCTTCTGTGGAGTTGCTGCCATGATCAGCACACCTACGTATTCTTATGCATGATAAGCAGCTCCATTTTGATGTTTAGGTGTTTTACATGGGCTTTAAGAATATGCCCAGATACCTCAGTAGAAAATTTTGAGCTATTTACCTAGTGTCCAAAGTGTGTTCCCTGATGATTAGTAGCTATTACTCTTCCAAATTTTGACGCGGTTGCTGCTCAAGTGCTCATCTAGCTACACAATTCTCAATCAGGAGTTTAGGGCCTGATATCTGTTGGCCGGTTGGTGATGCTGC AAATGCAACATGAT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14603#0 CCTCTCCTTTCCCCCGCTCCCCTTCCCCGAGGAGCCACGCCGCCGCCGCCGCCGCCGCCA 60
consensus_14603#1 ------------------------------------------------------------
consensus_14603#0 TGCCGAAGCACTACCGGCCTGCGGGCAAGAAGAAGGAGGGGAACGCGGCGAAGTACATCA 120
consensus_14603#1 ------------------------------------------------------------
consensus_14603#0 CCAGGACCAAGGCGGTGAAGTACCTGCAGATTAGCCTCGCAACCTTCAGGAAGCTATGCA 180
consensus_14603#1 ------------------------------------------------------------
consensus_14603#0 TTCTCAAGGGCGTCTTTCCCCGGGATCCAAAGAAGAAGGTGGAAGGGAACCACAAGACCT 240
consensus_14603#1 ------------------------------------------------------------
consensus_14603#0 ACTACCACATGAAGGATATTGCCTTCCTGGCCCATGATCCCTTGATTGAGAAGTTTAGAG 300
consensus_14603#1 ------------------------------------------------------------
consensus_14603#0 AAATCAAGGTCCACAGGAAGAAGGTCAAAAAGGCGTTTGCTAAGAAAAATAAAGATCTTG 360
consensus_14603#1 ------------------------------------------------------------
consensus_14603#0 CAGACAGATTATTGAACCGACCACCAACTTACAAACTTGACAGGCTTATTCTTGAAAGAT 420
consensus_14603#1 ------------------------------------------------------------
consensus_14603#0 ATCCAACTTTTGTTGATGCTCTTCGTGACTTGGATGATTGCCTAACAATGGTGCATCTTT 480
consensus_14603#1 ------------------------------------------------------------
consensus_14603#0 TTGCTGCGTTGCCTGCTGTTGAAGGTGAACGTGTGCAAGTTCAGCGGATTCATAATTGCC 540
consensus_14603#1 ------------------------------------------------------------
consensus_14603#0 GCAGGTTGAGCCATGAATGGCAAGCATATATATCTCGAACTCATTCCCTGCGAAAGACAT 600
consensus_14603#1 ------------------------------------------------------------
consensus_14603#0 TTATATCCGTCAAGGGCATATATTATCAAGCTGAAGTTCAAGGTCAAAAGATCACCTGGC 660
consensus_14603#1 ------------------------------------------------------------
consensus_14603#0 TAACTCCACATGCTCTTCAGCAAGTTTTAACTGATGACGTTGACTTCAATGTGATGCTTA 720
consensus_14603#1 ------------------------------------------------------------
consensus_14603#0 CCTTTTTGGAATTCTATGAGACACTTCTGGGATTTATAAACTTCAAGCTTTACCATTCGA 780
consensus_14603#1 ------------------------------------------------------------
consensus_14603#0 TAAATGTAAATTATCCTCCTGTTCTGGATCCTCGTTTGGAAGCTTTAGCTTCTGAGCTCT 840
consensus_14603#1 ------------------------------------------------------------
consensus_14603#0 ATGCGTTGTGCCGGTACATGTCTTCTGGAAGAGTACCTGGAAATTCAGAACCTGCTGGAC 900
consensus_14603#1 ------------------------------------------------------------
consensus_14603#0 TAATTGAAGACAAAGAGGGTGAAGACAATAAAGAGAGCTCAAAAACAGATGAGTCTGAAC 960
consensus_14603#1 ------------------------------------------------------------
consensus_14603#0 TCAGATTGGCACAACTTCAACACCAGCTCCCAACTAATGAACCTGGAGCGCTGATGCATC 1020
consensus_14603#1 ------------------------------------------------------------
consensus_14603#0 TTGTACAAGAATCTACTGCTGCTGATGCAGACGACGCTGATGCCAAAGAATGCAGGAGTT 1080
consensus_14603#1 ------------------------------------------------------------
consensus_14603#0 TATTCAAAAACCTGAAGTTCTACCTAAGTCGTGAGGTGCCTAGGGAATCTCTCTTATTTA 1140
consensus_14603#1 ------------------------------------------------------------
consensus_14603#0 TCATTCCAGCATTTGGTGGTACCGTTTCATGGGAAGGAGAAGGAGCTCCTTTTGATGAGA 1200
consensus_14603#1 ------------------------------------------------------------
consensus_14603#0 CAGATGAAGACATCACTCATCAGATTGTTGATAGACCGACCCAAAGCCACGTTTTCCTCT 1260
consensus_14603#1 ------------------------------------------------------------
consensus_14603#0 CTAGGGAGTATGTTCAACCACAGTGGATATATGATTGCGTGAATGCTCGCATCATATTGC 1320
consensus_14603#1 ------------------------------------------------------------
consensus_14603#0 CGACAGAAGGTTATATTGTCGGGAGGGTGCCTCCACCACATTTATCTCCCTTTGTGGACA 1380
consensus_14603#1 ------------------------------------------------------------
consensus_14603#0 ATGATGCAGAGGGTTACATTCCTGAGTATGCAGAGACCATTAAGAGGCTGCAAGCTGCTG 1440
consensus_14603#1 ------------------------------------------------------------
consensus_14603#0 CTCAAAGCCAGGTGTTGCCTCTGCCAAGTTTAGGGGACGAAGATATGGAAAATTCACTGG 1500
consensus_14603#1 ------------------------------------------------------------
consensus_14603#0 TAGAGGCAATTATTGATCGATCAGAGTCTAATGAAATTGCTGACAAGAAGAGGAAGTTGG 1560
consensus_14603#1 ------------------------------------------------------------
consensus_14603#0 AGATGCTAGAGAAGCAGTACCACGATGAGCTGAGGATGGAATACGAAGGAAAGACCTTCT 1620
consensus_14603#1 ------------------------------------------------------------
consensus_14603#0 CAAATAGGACGGCAGATAACCAACCAGATGTTGTGGACAAAAGTGATACTAAAGAAGCTG 1680
consensus_14603#1 ----------------------------------GCACGAGGGTGATACTAAAGAAGCTG 26
* ** * ******************
consensus_14603#0 ACGATCATATGGAGGACTCTCATAAACAAGCCGAGAAGGATGCTGCTGACATTTCCAAGA 1740
consensus_14603#1 ACGATCATATGGAGGACTCTCATAAACAAGCCGAGAAGGATGCTGCTGACATTTCCAAGA 86
************************************************************
consensus_14603#0 CCCTTATGTCTCGCAAGCAGAGAGGCCTTCTTCAAGCAATTGAGATTAACCAGGAAAGGA 1800
consensus_14603#1 CCCTTATGTCTCGCAAGCAGAGAGGCCTTCTTCAAGCAATTGAGATTAACCAGGAAAGGA 146
************************************************************
consensus_14603#0 AAAAGGACAAGGTGAACTTGCTGAAGAAAAGGAAAAAGAATGCTGATTCCAGTGCTTCGG 1860
consensus_14603#1 AAAAGGACAAGGTGAACTTGCTGAAGAAAAGGAAAAAGAATGCTGATTCCAGTGCTTCGG 206
************************************************************
consensus_14603#0 CCAAAGGTCGCTGAGGCTCGAACTTCATTTGCTCCATGCTGTATCTGTTTTGACAAATTG 1920
consensus_14603#1 CCAAAGGTCGCTGAGGCTCGAACTTCATTTGCTCCATGCTGTATCTGTTTTGACAAATTG 266
************************************************************
consensus_14603#0 TTCATCGGTCGCTGCTTCTGTGGAGTTGCTGCCATGATCTGCACACCTACGTATTCTTAT 1980
consensus_14603#1 TTCATCGGTCGCTGCTTCTGTGGAGTTGCTGCCATGATCAGCACACCTACGTATTCTTAT 326
*************************************** ********************
consensus_14603#0 GCATGATAAGCAGCTCCATTTTGATGTTTAGGTGTTTTACATGGGCTTTAAGAATATGCC 2040
consensus_14603#1 GCATGATAAGCAGCTCCATTTTGATGTTTAGGTGTTTTACATGGGCTTTAAGAATATGCC 386
************************************************************
consensus_14603#0 CAGATACCTCAGTAGAAAATTTTGAGCTATTTACCTAGTGTCCAAAGTGTGTTCCCTGAT 2100
consensus_14603#1 CAGATACCTCAGTAGAAAATTTTGAGCTATTTACCTAGTGTCCAAAGTGTGTTCCCTGAT 446
************************************************************
consensus_14603#0 GATTAGTAGCTATTACTCTTCCAAATTTTGACGCGGTTGCTGCTCAAGTGCTCATCTAGC 2160
consensus_14603#1 GATTAGTAGCTATTACTCTTCCAAATTTTGACGCGGTTGCTGCTCAAGTGCTCATCTAGC 506
************************************************************
consensus_14603#0 TACATAATTCTTAATCAGGAGTTTAGGGCCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNN 2220
consensus_14603#1 TACACAATTCTCAATCAGGAGTTTAGGGCCTGATATCTGTTGGCCGGTTGGTGATGCTGC 566
**** ****** ********************
consensus_14603#0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 2267
consensus_14603#1 AAAATGCAACATGATGAGTTGATGG---------------------- 591
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||