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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14613#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 2169 fasta sequence
[GATACGCGACAAAACAAATCCGCCCCCGAGAAAAGGAGGCCACGAAATTACGAGAATGCCACTCAACCTCGCCTCCTCTCCCGCCGCCGCCGCCGCCGCCAAGGTCTGCGCCGGCGTGCGCGCGTCCCCGCGCCACCTCCTCCCCCGCGCTCTTGACCACCAGAGCCGCCGCGTCCTCAGCTTGTCGTCCTCGTCGTCGGCGGGGCGTGCGGCGGGTGTGCGGGCCATGGCCGCGGCGGAGGCCGGTGCGTCGACGGCGACACAGGCTAAGTCGAGCGCAGGAGTCAAACAAGCACTGATATCATTGTCGGATAAAACAGACTTGGCCTATCTTGGGAATGGCCTTCAAGCCTTGGGGTTTTCTATTATTTCGACTGGTGGCACAGCATCAAGCCTGGAAGCAGCTGGAGTTAATGTTACAAAAGTTGAACAAATTACAAA-TTTTCCTGAAATGCTTGATGGTAGAGTTAAAACATTGCACCCCAGTGTACATGGTGGTATTCTTGCAAGAAGAGACCAGGAGCATCATCTTAAGGCATTGAATGAGCATGGCATTGGGACATTTGATGTGGTTGTGGTGAACTTGTATCCATTCTATAACAAGGTCACCTCTGGTGTAATTTCTTTCGAGGATGGCATTGAAAACATTGATATCGGTGGACCTACGATGATCCGAGCAGCAGCTAAGAATCATAAGGATGTTCTTGTTATGGTGGATCATGAAGATTACCCTGCTCTATTAGAGTATCTGCAAGGAAAACAAGATGACCAGCAATTCCGCAAGATGCTAGCATGGAAAGCTTTCCAACATGTCGCTTCTTATGATTCAGCTGTCTCAGAATGGTTGTGGAAGCAATCGAACAAAGGAGATGTATTCCCCCCGAACTTCACCGTGCCCCTGTCCCTGAAATCTACACTTCGTTATGGTGAAAATCCTCATCAAAAAGCTGCCTTCTATGGGGACAAGAGTCTTTCTGTAGTTAATGCTGGTGGTATTGCAACAGCAATTCAGCACCATGGGAAGGAAATGTCTTACAACAACTACTTAGATGCGGATGCTGCATGGAACTGTGTATCAGAGTTTGAGAGTCCTACGTGTGTTGTGGTTAAGCACACAAATCCATGTGGAGTAGCATCCCGACAGGATATTCTTGAAGCATACAGGTTGGCTGTAAAGGGAGATCCTGTTAGTGCATTTGGTGGGATAGTTGCTTTCAATACGACAATTGATGAGGATCTTGCAAAAGAAATCCGTGAATTCAGGAGCCCTACAGATGGACAGACGCGAATGTTCTACGAGATTGTTGTTGCACCCGGCTATACAGAAAAGGGTCTTGAGATCCTCAAAGGGAAATCAAAGACATTGAGGATACTGGAGGCGAAGAGAAGTGGAAAAGGGATGCTATCACTCAGGCAAGTCAGTGGTGGCTGGTTGGCTCAAGAGTCTGATGATCTAACCCCTGAAGATATCACCTTCACAACAG-TGTCCGAGAGAGCT-CCTCAAGACAGTGAGCTCTCTGATGCCAAATTTGCCTGGCTTTGTGTAAAGCACGTAAAGAGTAACGCCATTGTGATAGCCAAGAATAACTGCATGTTAGGCATGGGAAGTGGCCAGCCAAACAGACTGGAGAGTCTGAGAATTGCTTTCAGGAAAGCAGGAGAGGAGGCCAAAGGAGCTGCTTTGGCCAGTGATGCATTCTTCCCATTCGCTTGGAACGACGCCGTGGAGGAGGCGTGCCAGAACGGCATCGGCGTGATCGCGGAGCCGAGCGGCAGCATGAGGGACGGCGACGCCGTCGACTGCTGCAACAAGTACGGCGTCTCCCTCCTCTTCACCGGCGTCAGGCACTTCAGGCACTGAGCTAGCTAGCCTCATGAACCTTGATCTTCCTGCAAAAAAAGG-AAAAAAAACAT-GGGCATGTCAGATCGATCGCTCTTTCTGTATCACAAGAGCATGCAGATCGACCAGCGTTTGATCACCTTGAGAAAAACTCTTGACGGCTTGTACTAGGCTGCCTGCC-ACTGGTGTGACAGAATTTGATCAGCTTGACA-TTTTGCAATAAGATTCATGGTGATAATAAGATTAGGATGTCTCGTACTC-----AAAAAAAAAAAGGCGAAGGGCGGGAGGTCCATACTGATATATTGACCGTGCCCGCTAGCCCAGGNAGC]
[+] EMBL AK102764 [GATACGCGACAAAACAAATCCGCCCCCGAGAAAAGGAGGCCACGAAATTACGAGAATGCCACTCAACCTCGCCTCCTCTCCCGCCGCCGCCGCCGCCGCCAAGGTCTGCGCCGGCGTGCGCGCGTCCCCGCGCCACCTCCTCCCCCGCGCTCTTGACCACCAGAGCCGCCGCGTCCTCAGCTTGTCGTCCTCGTCGTCGGCGGGGCGTGCGGCGGGTGTGCGGGCCATGGCCGCGGCGGAGGCCGGTGCGTCGACGGCGACACAGGCTAAGTCGAGCGCAGGAGTCAAACAAGCACTGATATCATTGTCGGATAAAACAGACTTGGCCTATCTTGGGAATGGCCTTCAAGCCTTGGGGTTTTCTATTATTTCGACTGGTGGCACAGCATCAAGCCTGGAAGCAGCTGGAGTTAATGTTACAAAAGTTGAACAAATTACAAA TTTTCCTGAAATGCTTGATGGTAGAGTTAAAACATTGCACCCCAGTGTACATGGTGGTATTCTTGCAAGAAGAGACCAGGAGCATCATCTTAAGGCATTGAATGAGCATGGCATTGGGACATTTGATGTGGTTGTGGTGAACTTGTATCCATTCTATAACAAGGTCACCTCTGGTGTAATTTCTTTCGAGGATGGCATTGAAAACATTGATATCGGTGGACCTACGATGATCCGAGCAGCAGCTAAGAATCATAAGGATGTTCTTGTTATGGTGGATCATGAAGATTACCCTGCTCTATTAGAGTATCTGCAAGGAAAACAAGATGACCAGCAATTCCGCAAGATGCTAGCATGGAAAGCTTTCCAACATGTCGCTTCTTATGATTCAGCTGTCTCAGAATGGTTGTGGAAGCAATCGAACAAAGGAGATGTATTCCCCCCGAACTTCACCGTGCCCCTGTCCCTGAAATCTACACTTCGTTATGGTGAAAATCCTCATCAAAAAGCTGCCTTCTATGGGGACAAGAGTCTTTCTGTAGTTAATGCTGGTGGTATTGCAACAGCAATTCAGCACCATGGGAAGGAAATGTCTTACAACAACTACTTAGATGCGGATGCTGCATGGAACTGTGTATCAGAGTTTGAGAGTCCTACGTGTGTTGTGGTTAAGCACACAAATCCATGTGGAGTAGCATCCCGACAGGATATTCTTGAAGCATACAGGTTGGCTGTAAAGGGAGATCCTGTTAGTGCATTTGGTGGGATAGTTGCTTTCAATACGACAATTGATGAGGATCTTGCAAAAGAAATCCGTGAATTCAGGAGCCCTACAGATGGACAGACGCGAATGTTCTACGAGATTGTTGTTGCACCCGGCTATACAGAAAAGGGTCTTGAGATCCTCAAAGGGAAATCAAAGACATTGAGGATACTGGAGGCGAAGAGAAGTGGAAAAGGGATGCTATCACTCAGGCAAGTCAGTGGTGGCTGGTTGGCTCAAGAGTCTGATGATCTAACCCCTGAAGATATCACCTTCACAACAG TGTCCGAGAGAGCT CCTCAAGACAGTGAGCTCTCTGATGCCAAATTTGCCTGGCTTTGTGTAAAGCACGTAAAGAGTAACGCCATTGTGATAGCCAAGAATAACTGCATGTTAGGCATGGGAAGTGGCCAGCCAAACAGACTGGAGAGTCTGAGAATTGCTTTCAGGAAAGCAGGAGAGGAGGCCAAAGGAGCTGCTTTGGCCAGTGATGCATTCTTCCCATTCGCTTGGAACGACGCCGTGGAGGAGGCGTGCCAGAACGGCATCGGCGTGATCGCGGAGCCGAGCGGCAGCATGAGGGACGGCGACGCCGTCGACTGCTGCAACAAGTACGGCGTCTCCCTCCTCTTCACCGGCGTCAGGCACTTCAGGCACTGAGCTAGCTAGCCTCATGAACCTTGATCTTCCTGCAAAAAAAGG AAAAAAAACAT GGGCATGTCAGATCGATCGCTCTTTCTGTATCACAAGAGCATGCAGATCGACCAGCGTTTGATCACCTTGAGAAAAACTCTTGACGGCTTGTACTAGGCTGCCTGCC ACTGGTGTGACAGAATTTGATCAGCTTGACA TTTTGCAATAAGATTCATGGTGATAATAAGATTAG ]
[+] EMBL AK064336 [ ACGCGACAAAACAAATCCGCCCCCGAGAAAAGGAGGCCACGAAATTACGAGAATGCCACTCAACCTCGCCTCCTCTCCCGCCGCCGCCGCCGCCGCCAAGGTCTGCGCCGGCGTGCGCGCGTCCCCGCGCCACCTCCTCCCCCGCGCTCTTGACCACCAGAGCCGCCGCGTCCTCAGCTTGTCGTCCTCGTCGTCGGCGGGGCGTGCGGCGGGTGTGCGGGCCATGGCCGCGGCGGAGGCCGGTGCGTCGACGGCGACACAGGCTAAGTCGAGC GGAGTCAAACAAGCACTGATATCATTGTCGGATAAAACAGACTTGGCCTATCTTGGGAATGGCCTTCAAGCCTTGGGGTTTTCTATTATTTCGACTGGTGGCACAGCATCAAGCCTGGAAGCAGCTGGAGTTAATGTTACAAAAGTTGAACAAATTACAAA TTTTCCTGAAATGCTTGATGGTAGAGTTAAAACATTGCACCCCAGTGTACATGGTGGTATTCTTGCGAGAAGAGACCAGGAGCATCATCTTAAGGCATTGAATGAGCATGGTATTGGGACATTTGATGTGGTTGTGGTGAACTTGTATCCATTCTATAACAAGGTCACCTCTGGTGTAATTTCTTTCGAGGATGGCATTGAAAACATTGATATCGGTGGACCTACGATGATCCGAGCAGCAGCTAAGAATCACAAGGATGTTCTTGTTATGGTGGATCATGAAGATTACCCTGCTCTATTAGAGTATCTGCAAGGAAAACAAGATGACCAGCAATTCCGCAAGATGCTAGCATGGAAAGCTTTCCAACATGTCGCTTCTTATGATTCAGCTGTCTCAGAATGGATGTGGAAGCAATCGAACAAAGGAGATGTATTCCCCCCGAACTTCACCGTGCCCCTGTCCCTGAAATCTACACTTCGTTATGGTGAAAATCCTCATCAAAAAGCTGCCTTCTATGGGGACAAGAGTCTTTCTGTAGTTAATGCTGGTGGTATTGCAACAGCAATTCAGCACCATGGGAAGGAAATGTCTTACAACAACTACTTAGATGCGGATGCTGCATGGAACTGTGTATCAGAGTTTGAGAGTCCTACGTGTGTTGTGGTTAAGCACACAAATCCATGTGGAGTAGCATCCCGACAGGATATTCTTGAAGCATACAGGTTGGCTGTAAAGGGAGATCCTGTTAGTGCATTTGGTGGGATAGTTGCTTTCAATACGACAATTGATGAGGATCTTGCAAAAGAAATCCGTGAATTCAGGAGCCCTACAGATGGACAGACGCGAATGTTCTACGAGATTGTTGTTGCACCCGGCTATACAGAAAAGGGTCTTGAGATCCTCAAAGGGAAATCAAAGACATTGAGGATACTGGAGGCGAAGAGAAGTGGAAAAGGGATGCTATCACTCAGGCAAGTCAGTGGTGGCTGGTTGGCTCAAGAGTCTGATGATCTAACCCCTGAAGATATCACCTTCACAACAG TGTCCGAGAGAGCT CCTCAAGACAGTGAGCTCTCTGATGCCAAATTTGCCTGGCTTTGTGTAAAGCACGTAAAGAGTAACGCCATTGTGATAGCCAAGAATAACTGCATGTTAGGCATGGGAAGTGGCCAGCCAAACAGACTGGAGAGTCTGAGAATTGCTTTCAGGAAAGCAGGAGAGGAGGCCAAAGGAGCTGCTTTGGCCAGTGATGCATTCTTCCCATTCGCTTGGAACGACGCCGTGGAGGAGGCGTGCCAGAACGGCATCGGCGTGATCGCGGAGCCGAGCGGCAGCATGAGGGACGGCGACGCCGTCGACTGCTGCAACAAGTACGGCGTCTCCCTCCTCTTCACCGGCGTCAGGCACTTCAGGCACTGAGCTAGCTAGCCTCATGAACCTTGATCTTCCTGC AAAAAAGG AAAAAAAACAT GGGCATGTCAGATCGATCGCTCTTTCTGTATCACAAGAGCATGCAGATCGACCAGCGTTTGATCACCTTGAGAAAAACTCTTGACGGCTTGTACTAGGCTGCCTGCC ACTGGTGTGACAGAATTTGATCAGCTTGACA TTTTGCAATAAGATTCATGGTGATAATAAGATTAGGATGTCTCGTACTC AAAAAAAAAA ]
[+] EMBL CB639314 [ CCTCGCCTCCTCTCCCGCCGCCGCCGCCGCCGCCAAGGTCTGCGCCGGCGTGCGCGCGTCCCCGCGCCACCTCCTCCCCCGCGCTCTTGACCACCAGAGCCGCCGCGTCCTCAGCTTGTCGTCCTCGTCGTCGGCGGGGCGTGCGGCGGGTGTGCGGGCCATGGCCGCGGCGGAGGCCGGTGCGTCGACGGCGACACAGGCTAAGTCGAGC GGAGTCAAACAAGCACTGATATCATTGTCGGATAAAACAGACTTGGCCTATCTTGGGAATGGCCTTCAAGCCTTGGGGTTTTCTATTATTTCGACTGGTGGCACAGCATCAAGCCTGGAAGCAGCTGGAGTTAATGTTCCAAAAGTTGAACAAGTTGCAAATTTTTCCTGAAATGCTTGATGGTGGAGTTAAA ]
[+] EMBL CB637911 [ aGTCTGCGCCGGCGTGCGCGCGTCCCCGCGCCACCTCCTCCCCCGCGCTCTTGACCACCAGAGCCGCCGCGTCCTCAGCTTGTCGTCCTCGTCGTCGGCGGGGCGTGCGGCGGGTGTGCGGGCCATGGCCGCGGCGGAGGCCGGTGCGTCGACGGCGACACAGGCTAAGTCGAGCGCAGGAGTCAAACAAGCACTGATATCATTGTCGGATAAAACAGACTTGGCCTATCTTGGGAATGGCCTTCAAGCCTTGGGGTTTTCTATTATTTCGACTGGTGGCACAGCATCAAGCCTGGAAGCAGCTGGAGTTAATGTTACAAAAGTTGAACAAATTACAAA TTTTCCTGAAATGCTTGATGGTAGAGTTAAAACATTGCACCCCAGTGTACATGGTGGTATTCTTGCAAGAAGAGACCAGGAGCATCATCTTAAGGCATTGAATGAGCATGGCATTGGGACATTTGATGTGGTTGTGGTGAACTTGTATCCATTCTATAACAAGGTCACCTCTGGTGTAATTTCTTTCGAGGATGGCATTGAAAACATTGATATCGGTGGACCTACGATGATCC ]
[+] EMBL CB637925 [ aGTCTGCGCCGGCGTGCGCGCGTCCCCGCGCCACCTCCTCCCCCGCGCTCTTGACCACCAGAGCCGCCGCGTCCTCAGCTTGTCGTCCTCGTCGTCGGCGGGGCGTGCGGCGGGTGTGCGGGCCATGGCCGCGGCGGAGGCCGGTGCGTCGACGGCGACACAGGCTAAGTCGAGCGCAGGAGTCAAACAAGCACTGATATCATTGTCGGATAAAACAGACTTGGCCTATCTTGGGAATGGCCTTCAAGCCTTGGGGTTTTCTATTATTTCGACTGGTGGCACAGCATCAAGCCTGGAAGCAGCTGGAGTTAATGTTACAAAAGTTGAACAAATTACAAA TTTTCCTGAAATGCTTGATGGTAGAGTTAAAACATTGCACCCCAGTGTACATGGTGGTATTCTTGCAAGAAGAGACCAGGAGCATCATCTTAAGGCATTGAATGAGCATGGCATTGGGACATTTGATGTGGTTGTGGTGAACTTGTATCCATTCTATAACAAAGTCACCTCTGGTGTAA ]
[+] EMBL CB662615 [ AGATTACCCTGCTCTATTAGAGTATCTGCAAGGAAAACAAGATGACCAGCAATTCCGCAAGATGCTAGCATGGAAAGCTTTCCAACATGTCGCTTCTTATGATTCAGCTGTCTCAGAATGGTTGTGGAAGCAATCGAACAAAGGAGATGTATTCCCCCCGAACTTCACCGTGCCCCTGTCCCTGAAATCTACACTTCGTTATGGTGAAAATCCTCATCAAAAAGCTGCCTTCTATGGGGACAAGAGTCTTTCTGTAGTTAATGCTGGTGGTATTGCAACAGCAATTCAGCACCATGGGAAGGAAATGTCTTACAACAACTACTTAGATGCGGATGCTGCATGGAACTGTGTATCAGAGTTTGAGAGTCCTACGTGTGTTGTGGTTAAGCACACAAATCCATGTGGAGTAGCATCCCGACAGGATATTCTTGAAGCATACAGGTTGGCTGTAAAGGGAGATCCTGTTAGTGCATTTGGTGGGATAGTTGCTTTCAATACGACAATTGATGAGGATCTTGCAAAAGAAATCCGTGAATTCAGGAGCCCTACAGATGGACAGACGCGAATGTTCTACGAGATTGTTGTTGCACCCGGCTATACAGAAAAGGGTCTTGAGATCCTCAAAGGGAAATCAAAGACATTGAGGATACTGGAGGCGAAGAGAAGTGGAAAAGGGATGCTATCACTCANGCAAGTCAGTGGTGGCTGGTTGGCTCAAGAGTCTGATGATCTAACCCCTGAAGATATCACCTTCACAACAG TGTCCGAGAGAGCTCCCTC AGACAGTGAGCTCTCTGATGCCAAATTTG ]
[+] EMBL CB662682 [ AGATTACCCTGCTCTATTAGAGTATCTGCAAGGAAAACAAGATGACCAGCAATTCCGCAAGATGCTAGCATGGAAAGCTTTCCAACATGTCGCTTCTTATGATTCAGCTGTCTCAGAATGGTTGTGGAAGCAATCGAACAAAGGAGATGTATTCCCCCCGAACTTCACCGTGCCCCTGTCCCTGAAATCTACACTTCGTTATGGTGAAAATCCTCATCAAAAAGCTGCCTTCTATGGGGACAAGAGTCTTTCTGTAGTTAATGCTGGTGGTATTGCAACAGCAATTCAGCACCATGGGAAGGAAATGTCTTACAACAACTACTTAGATGCGGATGCTGCATGGAACTGTGTATCAGAGTTTGAGAGTCCTACGTGTGTTGTGGTTAAGCACACAAATCCATGTGGAGTAGCATCCCGACAGGATATTCTTGAAGCATACAGGTTGGCTGTAAAGGGAGATCCTGTTAGTGCATTTGGTGGGATAGTTGCTTTCAATACGACAATTGATGAGGATCTTGCAAAAGAAATCCGTGAATTCAGGAGCCCTACAGATGGACAGACGCGAATGTTCTACGAGATTGTTGTTGCACCCGGCTATACAGAAAAGGGTCTTGAGATCCTCAAAGGGAAATCAAAGACATTGAGGATACTGGAGGCGAAGAGAAGTGGAAAAGGGATGCTATCACTCAGGCAAGTCAGTGGTGGCTGGTTGGCTCAAGAGTCTGATGATCTAACCCCTGAAGATATCACCTTCACAACAG TGTCCGAGAGAGCT CCTCAAGACAGTGAG ]
[+] EMBL OS1321694 [ gccntnGTAAAGGNAGATCCTNTTAGTCCATTTGGTGGGATAGTTNCTTTCAATACGACAATTGATGAGGATCTTCCAAAANAAATCCGTGAATTCAGGAGCCCTACAGATGGACANACGCGAATTTNCTACGANATTNTTGTTGCACCCGGCTATACAGAAAAGGGTCTTGAGATCCTCAAAGGGAAATCAAAGACATTGAGGATACTGGAGGCGAAGAGAAGTGGAAAAGGGATGCTATCACTCAGGCAAGTCAGTGGTGGCTGGTTGGCTCAAGAGTCTGATGATCTAACCCCTGAAGATATCACCTTCACAACAGTTTTCCGANAGANCT CCTC ]
[+] EMBL BP185076 [ AGCCCTACAGATGGACAGACGCGAATGTTCTACGAGATTGTTGTTGCACCCGGCTATACAGAAAAGGGTCTTGAGATCCTCAAAGGGAAATCAAAGACATTGAGGATACTGGAGGCGAAGAGAAGTGGAAAAGGGATGCTATCACTCAGGCAAGTCAGTGGTGGCTGGTTGGCTCAAGAGTCTGATGATCTAACCCCTGAAGATATCACCTTCACAACAG TGTCCGAGAGAGCT CCTCAAGACAGTGAGCTCTCTGATGCCAAATTTGCCTGGCTTTGTGTAAAGCACGTAAAGAGTAACGCCATTGTGATAGCCAAGAATAACTGCATGTTAGGCATGGGAAGTGGCCAGCCAAACAGACTGGAGAGTCTGAGAATTGCTTTCAGGAAAGCAGGAGAGGAGGCCAAAGGAGCTGCTTTGGCCAGTGATGCATTCTTCCCATTCGCTTGGAACGACGCCGTGGAGGAGGCGTGCCAGAACGGCATCGGCGTGATCGCGGAGCCGAGCGGCAGCATGAGGGACGGCGACGCCGTCGACTGCTGCAACAAGTACGGCGTCTCCCTCCTCTTCACCGGCGTCAGGCACTTCAGGCACTGAGCTAGCTAGCCTCATGAACCTTGATCTTCCTGCAAAAAAAGGAAAAAAAAACATGGGGCATGTCAG ]
[-] EMBL CB662616 [ TTGCACCCGGCTATACAGAGAAGGGTCTTGAGATCCTCAAAGGGAAATCAAAGACATTGAGGATACTGGAGGCGAAGAGAAGTGGAAAAGGGATGCTATCACTCAGGCAAGTCAGTGGTGGCTGGTTGGCTCAAGAGTCTGATGATCTAACCCCTGAAGATATCACCTTCACAACAG TGTCCGAGAGAGCT CCTCAAGACAGTGAGCTCTCTGATGCCAAATTTGCCTGGCTTTGTGTAAAGCACGTAAAGAGTAACGCCATTGTGATAGCCAAGAATAACTGCATGTTAGGCATGGGAAGTGGCCAGCCAAACAGACTGGAGAGTCTGAGAATTGCTTTCAGGAAAGCAGGAGAGGAGGCCAAAGGAGCTGCTTTGGCCAGTGATGCATTCTTCCCATTCGCTTGGAACGACGCCGTGGAGGAGGCGTGCCAGAACGGCATCGGCGTGATCGCGGAGCCGAGCGGCAGCATGAGGGACGGCGACGCCGTCGACTGTTGCAACAAGTACGGCGTCTCCCTCCTCTTCACCGGCGTCAGGCACTTCAGGCACTGAGCTAGCTAGCCTCATGAACCTTGATCTTCCTGCAAAAAAAGGAAAAAAAAACAT GGGCATGTCAGATCGATCGCTCTTTTTGTATCACAAGAGCATGCAGATCGACCAGCGTTTGATCACCTTGAGAAAAACTCTTGACGGCTTGTAATAGGCTGCCTGCC ACTGGTGTGACAGAATTTGATCAGCTTGACA TTTTGCAATAAGATTCATGGTGATAATAAGATTAGGATGTCTCGTAC ]
[+] EMBL BM419401 [ ATACAGAAAAGGGTC TGAGATCCTCAAA GGAAATCAAAGACATTGAGGATACTGGAGGCGAAGAGAAGTGGAAAAGGGATGCTATCACTCAGGCAAGTCAGTGGTGGCTGGTTGGCTCAAGAGTCTGATGATCTAACCCCTGAAGATATCACCTTCAC ACAG TGTCCGAGAGAGCT CCTCAAGACAGTGAGCTCTCTGATGCCAAATTTGCCTGGCTTTGTGTAAAGCACGTAAAGAGTAACGCCATTGTGATAGCCAAGAATAACTGCATGTTAGGCATGGGAAGTGGCCAGCC AACAGACTGGAGAGTCTGAGAATTGCTTTCAGGAAAGCAGGAGAGGAGGCCAAAGGAGCTGCTTTGGCCAGTGATGCATTCTTCCCATTCGCTTGGAACGACGCCGTGGATGAGGCGTGCCAGAACGGCATCGGCGTGATCGCGGAGCCGAGCGGCAGCATGAGGGACGGCGACGCCGTCGACTGCTGCAACAAGTACGGCGTCTCCCTCCTCTTCACCGGCGTCAGGCACTTCAGGCACTGAGCTAGCTAGCCTCATGAACCTTGATCTTCCTGCAAAA ]
[+] EMBL BM419546 [ aATTGAGGATACTGGA GCGAAGAGAAGTGGAAAAGGGATGCTATCACTCAGGCAAGTCAGTGGTGGCTGGTTGGCTCAAGAGTCTGATGATCTAACCCCTGAAGATATCACCTTCACAACAG TGTCCGAGAGAGCT CCTCAAGACAGTGAGCTCTCTGATGCCAAATTTGCCTGGCTTTGTGTAAAGCACGTAAAGAGTAACGCCATTGTGATAGCCAAGAATAACTGCATGTTAGGCATGGGAAGTGGCCAGCCAAACAGACTGGAGAGTCTGAGAATTGCTTTCAGGAAAGCAGGAGAGGAGGCCAAAGGAGCTGCTTTGGCCAGTGATGCATTCTTCCCATTCGCTTGGAACGACGCCGTGGATGAGGCGTGCCAGAACGGCATCGGCGTGATCGCGGAGCCGAGCGCCAGCATGAGGGACGGCGACGCCGTCGACTGCTGCAACAAGTACGGCGTCTCCCTCCTCTTCACCGGCGTCAGGCACTTCAGGCACTGAGCTAGCTAGCCTCATGAACCTTGATCTTCCTGCAAAAA ]
[-] EMBL CB662683 [ AAAGGGATGCTATCACTCAGGCAAGTCAGTGGTGGCTGGTTGGCTCAAGAGTCTGATGATCTAACCCATGAAGATATCACCTTCACAACAG TGTCCGAGAGAGCT CCTCAAGACAGTGAGCTCTCTGATGCCAAATTTGCCTGGCTTTGTGTAAAGCACGTAAAGAGTAACGCCATTGTGATAGCCAAGAATAACTGCATGTTAGGCATGGGAAGTGGCCAGCCAATCAGACTGGAGAGTCTGAGAATTGCTTTCAGGAAAGCAGGAGAGGAGGCCAAAGGAGATGCTTTGGCCAGTGATGCATTCTTCCCATTCGCTTGGAAAGACGCCGTGGAGGAGGCGTGCCAGAACGGCATAGGCGTGATTGCGGAGCCGAGCGGCAGCATGAGGGACGGCGACGCCGTCGTCTGTTGCAACAAGTAGGGCGTCTCCCTCCTCTTCACCGGCGTCAGGCACTTCAGGCTCTGAGCTAGATAGCCTCATGAACCTTGATGTTCATGCAAAAAAAGG AAAAAAAACAT GGGCATGTCAGATGGATCGCTCTTTTTGTATCACAAGAGCATGCAGATGGTCCAGCGTTTGATCACCCTGTGAAAAACTCTTGACGGATTGTAATAGGCTGCCTGCCAAGTGGTGTGACAGAATTTGATCAGCTTGACA TTTTGCAATAAGATTCATGGTGATAATAAGATTAGGATGT ]
[+] EMBL CA757373 [ GCCTGGCTTTGTGTAAAGCACGTAAAGAGTAACGCCATTGTGATAGCCAAGAATAACTGCATGTTAGGCATGGGAAGTGGCCAGCCAAACAGACTGGAGAGTCTGAGAATTGCTTTCAGGAAAGCAGGAGAGGAGGCCAAAGGAGCTGCTTTGGCCAGTGATGCATTCTTCCCATTCGCTTGGAACGACGCCGTGGAGGAGGCGTGCCAGAACGGCATCGGCGTGATCGCGGAGCCGAGCGGCAGCATGAGGGACGGCGACGCCGTCGACTGCTGCAACAAGTACGGCGTCTCCCTCCTCTTCACCGGCGTCAGGCACTTCAGGCACTGAGCTAGCTAGCCTCATGAACCTTGATCTTCCTGCAAAAAAAGG AAAAAAAACAT GGGCATGTCAGATCGATCGCTCTTTCTGTATCACAAGAGCATGCAGATCGACCAGCGTTTGATCACCTTGAGAAAAACTCTTGACGGCTTGTACTAGGCTGCCTGCC ACTGGNGNGACAGAATTTGATCAGCTTGACATTTTTGCACTAGGATTCATGGTGATAATAAGATTAGGATGGCCCGTACTCGTTCTAAAAAAAGGAAGGCGAAGGGCGGGAGGTCCATACTGATATATTGACCGTGCCCGCTAGCCCAGGNAGC]
[-] EMBL CB637926 [ CACGTAAAGAGTAACGCCATTGTGATAGCCAAGAATAACTGCATGTTAGGCATGGGAAGTGGCCAGCCAAACAGACTGGAGAGTCTGAGAATTGCTTTCAGGAAAGCAGGAGAGGAGGCCAAAGGAGCTGCTTTGGCCAGTGATGCATTCTTCCCATTCGCTTGGAACGACGCCGTGGAGGAGGCGTGCCAGAACGGCATCGGCGTGATCGCGGAGCCGAGCGGCAGCATGAGGGACGGCGACGCCGTCGACTGCTGCAACAAGTACGGCGTCTCCCTCCTCTTCACCGGCGTCAGGCACTTCAGGCACTGAGCTAGCTAGCCTCATGAACCTTGATCTTCCTGCAAAAAAAGG AAAAAAAACAT GGGCATGTCAGATCGATCGCTCTTTCTGTATCACAAGAGCATGCAGATCGACCAGCGTTTGATCACCTTGAGAAAAACTCTTGACGGCTTGTACTAGGCTGCCTGCC ACTGGTGTGACAGAATTTGATCAGCTTGACA TTTTGCAATAAGATTCATGGTGATAATAAGATTAGGATGT ]
[-] EMBL CB637912 [ TAAAGAGTAACGCCATTGTGATAGCCAAGAATAACTGCATGTTAGGCATGGGAAGTGGCCAGCCAAACAGACTGGAGAGTCTGAGAATTGCTTTCAGGAAAGCAGGAGAGGAGGCCAAAGGAGCTGCTTTGGCCAGTGATGCATTCTTCCCATTCGCTTGGAACGACGCCGTGGAGGAGGCGTGCCAGAACGGCATCGGCGTGATCGCGGAGCCGAGCGGCAGCATGAGGGACGGCGACGCCGTCGACTGCTGCAACAAGTACGGCGTCTCCCTCCTCTTCACCGGCGTCAGGCACTTCAGGCACTGAGCTAGCTAGCCTCATGAACCTTGATCTTCCTGCAAAAAAAGG AAAAAAAACAT GGGCATGTCAGATCGATCGCTCTTTCTGTATCACAAGAGCATGCAGATCGACCAGCGTTTGATCACCTTGAGAAAAACTCTTGACGGCTTGTACTAGGCTGCCTGCC ACTGGTGTGACAGAATTTGATCAGCTTGACA TTTTGCAATAAGATTCAT ]
consensusID : consensus_14613#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 670 fasta sequence
[TTTCACTCACNGGTGCCGGGGGGCTCCCGTTCTCGGCGCTGGGGTTTTTTNTGTGCGCANTGGTCTCGGGTCTTGTTGTTTATTGATCCTTNTTNTGGGTGGTACCCCCGTTGTGTGTTTGCCCTGGATTTCCGCGCCAGTGTTTAGGCCTTGGGGAAGTGNCCATCCCTCCTGACTGGAGATTCTGAGAATGCCTTTCAGGAAACAGGAGAGAAGGCCAAAGGAGCTGCTTTGGCCAGTGATGCATTCTTCCCATTCGCTTGGAACGACGCCGTGGATGAGGCGTGCCAGAACGGCATCGGCGTGATCGCGGAGCCGAGCGGCAGCATGAGGGACGGCGTACGCCGTCGACTGCTGCAACAAGTACGGCGTCTCCCTCCTCTTCACCGGCGTCAGGCACTTCAGGCACTGAGCTAGCTAGCCTCATGAACCTTGATCTTCCTGCAAAAAAAGGAAAAAAAACATGGGCATGTCAGATCGATCGCTCTTGTCTGTATCACAAGAGCATGCAGATCGACCAGCGTTTGATCACCCTTGAGAAAAACTCTTGACGGCTTGTACTAGGCTGCCTGCCACCTGGTGTGACAGAATTTGATCAGCTTGACCTTTTCCATAAGATTCATGGTGATAATAAGATTAGGATGTCTCGTACTCATTCTAAAAAAAAAAA]
[+] EMBL BM038613 [TTTCACTCACNGGTGCCGGGGGGCTCCCGTTCTCGGCGCTGGGGTTTTTTNTGTGCGCANTGGTCTCGGGTCTTGTTGTTTATTGATCCTTNTTNTGGGTGGTACCCCCGTTGTGTGTTTGCCCTGGATTTCCGCGCCAGTGTTTAGGCCTTGGGGAAGTGNCCATCCCTCCTGACTGGAGATTCTGAGAATGCCTTTCAGGAAACAGGAGAGAAGGCCAAAGGAGCTGCTTTGGCCAGTGATGCATTCTTCCCATTCGCTTGGAACGACGCCGTGGATGAGGCGTGCCAGAACGGCATCGGCGTGATCGCGGAGCCGAGCGGCAGCATGAGGGACGGCGTACGCCGTCGACTGCTGCAACAAGTACGGCGTCTCCCTCCTCTTCACCGGCGTCAGGCACTTCAGGCACTGAGCTAGCTAGCCTCATGAACCTTGATCTTCCTGCAAAAAAAGGAAAAAAAACATGGGCATGTCAGATCGATCGCTCTTGTCTGTATCACAAGAGCATGCAGATCGACCAGCGTTTGATCACCCTTGAGAAAAACTCTTGACGGCTTGTACTAGGCTGCCTGCCACCTGGTGTGACAGAATTTGATCAGCTTGACCTTTTCCATAAGATTCATGGTGATAATAAGATTAGGATGTCTCGTACTCATTCTAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14613#0 GATACGCGACAAAACAAATCCGCCCCCGAGAAAAGGAGGCCACGAAATTACGAGAATGCC 60
consensus_14613#1 ------------------------------------------------------------
consensus_14613#0 ACTCAACCTCGCCTCCTCTCCCGCCGCCGCCGCCGCCGCCAAGGTCTGCGCCGGCGTGCG 120
consensus_14613#1 ------------------------------------------------------------
consensus_14613#0 CGCGTCCCCGCGCCACCTCCTCCCCCGCGCTCTTGACCACCAGAGCCGCCGCGTCCTCAG 180
consensus_14613#1 ------------------------------------------------------------
consensus_14613#0 CTTGTCGTCCTCGTCGTCGGCGGGGCGTGCGGCGGGTGTGCGGGCCATGGCCGCGGCGGA 240
consensus_14613#1 ------------------------------------------------------------
consensus_14613#0 GGCCGGTGCGTCGACGGCGACACAGGCTAAGTCGAGCGCAGGAGTCAAACAAGCACTGAT 300
consensus_14613#1 ------------------------------------------------------------
consensus_14613#0 ATCATTGTCGGATAAAACAGACTTGGCCTATCTTGGGAATGGCCTTCAAGCCTTGGGGTT 360
consensus_14613#1 ------------------------------------------------------------
consensus_14613#0 TTCTATTATTTCGACTGGTGGCACAGCATCAAGCCTGGAAGCAGCTGGAGTTAATGTTAC 420
consensus_14613#1 ------------------------------------------------------------
consensus_14613#0 AAAAGTTGAACAAATTACAAATTTTCCTGAAATGCTTGATGGTAGAGTTAAAACATTGCA 480
consensus_14613#1 ------------------------------------------------------------
consensus_14613#0 CCCCAGTGTACATGGTGGTATTCTTGCAAGAAGAGACCAGGAGCATCATCTTAAGGCATT 540
consensus_14613#1 ------------------------------------------------------------
consensus_14613#0 GAATGAGCATGGCATTGGGACATTTGATGTGGTTGTGGTGAACTTGTATCCATTCTATAA 600
consensus_14613#1 ------------------------------------------------------------
consensus_14613#0 CAAGGTCACCTCTGGTGTAATTTCTTTCGAGGATGGCATTGAAAACATTGATATCGGTGG 660
consensus_14613#1 ------------------------------------------------------------
consensus_14613#0 ACCTACGATGATCCGAGCAGCAGCTAAGAATCATAAGGATGTTCTTGTTATGGTGGATCA 720
consensus_14613#1 ------------------------------------------------------------
consensus_14613#0 TGAAGATTACCCTGCTCTATTAGAGTATCTGCAAGGAAAACAAGATGACCAGCAATTCCG 780
consensus_14613#1 ------------------------------------------------------------
consensus_14613#0 CAAGATGCTAGCATGGAAAGCTTTCCAACATGTCGCTTCTTATGATTCAGCTGTCTCAGA 840
consensus_14613#1 ------------------------------------------------------------
consensus_14613#0 ATGGTTGTGGAAGCAATCGAACAAAGGAGATGTATTCCCCCCGAACTTCACCGTGCCCCT 900
consensus_14613#1 ------------------------------------------------------------
consensus_14613#0 GTCCCTGAAATCTACACTTCGTTATGGTGAAAATCCTCATCAAAAAGCTGCCTTCTATGG 960
consensus_14613#1 ------------------------------------------------------------
consensus_14613#0 GGACAAGAGTCTTTCTGTAGTTAATGCTGGTGGTATTGCAACAGCAATTCAGCACCATGG 1020
consensus_14613#1 ------------------------------------------------------------
consensus_14613#0 GAAGGAAATGTCTTACAACAACTACTTAGATGCGGATGCTGCATGGAACTGTGTATCAGA 1080
consensus_14613#1 ------------------------------------------------------------
consensus_14613#0 GTTTGAGAGTCCTACGTGTGTTGTGGTTAAGCACACAAATCCATGTGGAGTAGCATCCCG 1140
consensus_14613#1 ------------------------------------------------------------
consensus_14613#0 ACAGGATATTCTTGAAGCATACAGGTTGGCTGTAAAGGGAGATCCTGTTAGTGCATTTGG 1200
consensus_14613#1 ------------------------------------------------------------
consensus_14613#0 TGGGATAGTTGCTTTCAATACGACAATTGATGAGGATCTTGCAAAAGAAATCCGTGAATT 1260
consensus_14613#1 ------------------------------------------------------------
consensus_14613#0 CAGGAGCCCTACAGATGGACAGACGCGAATGTTCTACGAGATTGTTGTTGCACCCGGCTA 1320
consensus_14613#1 ------------------------------------------------------------
consensus_14613#0 TACAGAAAAGGGTCTTGAGATCCTCAAAGGGAAATCAAAGACATTGAGGATACTGGAGGC 1380
consensus_14613#1 ------------------------------------------------------------
consensus_14613#0 GAAGAGAAGTGGAAAAGGGATGCTATCACTCAGGCAAGTCAGTGGTGGCTGGTTGGCTCA 1440
consensus_14613#1 ------------------------------------------------------------
consensus_14613#0 AGAGTCTGATGATCTAACCCCTGAAGATATCACCTTCACAACAGTGTCCGAGAGAGCTCC 1500
consensus_14613#1 ----TTTCACTCACNGGTGCCGGGGGGC-TCCCGTTCTCGGCGCTG-------GGGTTTT 48
* * * * ** * * ** * *** * * ** * * *
consensus_14613#0 TCAAGACAGTGAGCTCTCTGATGCCAAATTTGCCTGGCTTTGTGTAAAGCACGTAAAGAG 1560
consensus_14613#1 TTN------TGTGCGCANTGGTCTCGGGTCTTGTTGTTTATTGATCCTTNTTNTGGGTGG 102
* ** ** * ** * * * * ** * * * * *
consensus_14613#0 TAACGCCATTGTGA--TAGCCAAGAATAACTGCATG-----TTAGGCAT--GGGAAGTGG 1611
consensus_14613#1 TACCCCCGTTGTGTGTTTGCCCTGGATTTCCGCGCCAGTGTTTAGGCCTTGGGGAAGTGN 162
** * ** ***** * *** * ** * ** ****** * ********
consensus_14613#0 CCAGCCAAACAGACTGGAGAGTCTGAGAATTGCTTTCAGGAAAGCAGGAGAGGAGGCCAA 1671
consensus_14613#1 CCATCCCTCCTGACTGGAGATTCTGAGAATGCCTTTCAGGAAA-CAGGAGAGAAGGCCAA 221
*** ** * ********* ********* *********** ******** *******
consensus_14613#0 AGGAGCTGCTTTGGCCAGTGATGCATTCTTCCCATTCGCTTGGAACGACGCCGTGGAGGA 1731
consensus_14613#1 AGGAGCTGCTTTGGCCAGTGATGCATTCTTCCCATTCGCTTGGAACGACGCCGTGGATGA 281
********************************************************* **
consensus_14613#0 GGCGTGCCAGAACGGCATCGGCGTGATCGCGGAGCCGAGCGGCAGCATGAGGGACGGCG- 1790
consensus_14613#1 GGCGTGCCAGAACGGCATCGGCGTGATCGCGGAGCCGAGCGGCAGCATGAGGGACGGCGT 341
***********************************************************
consensus_14613#0 ACGCCGTCGACTGCTGCAACAAGTACGGCGTCTCCCTCCTCTTCACCGGCGTCAGGCACT 1850
consensus_14613#1 ACGCCGTCGACTGCTGCAACAAGTACGGCGTCTCCCTCCTCTTCACCGGCGTCAGGCACT 401
************************************************************
consensus_14613#0 TCAGGCACTGAGCTAGCTAGCCTCATGAACCTTGATCTTCCTGCAAAAAAAGGAAAAAAA 1910
consensus_14613#1 TCAGGCACTGAGCTAGCTAGCCTCATGAACCTTGATCTTCCTGCAAAAAAAGGAAAAAAA 461
************************************************************
consensus_14613#0 ACATGGGCATGTCAGATCGATCGCTCTT-TCTGTATCACAAGAGCATGCAGATCGACCAG 1969
consensus_14613#1 ACATGGGCATGTCAGATCGATCGCTCTTGTCTGTATCACAAGAGCATGCAGATCGACCAG 521
**************************** *******************************
consensus_14613#0 CGTTTGATCACC-TTGAGAAAAACTCTTGACGGCTTGTACTAGGCTGCCTGCCAC-TGGT 2027
consensus_14613#1 CGTTTGATCACCCTTGAGAAAAACTCTTGACGGCTTGTACTAGGCTGCCTGCCACCTGGT 581
************ ****************************************** ****
consensus_14613#0 GTGACAGAATTTGATCAGCTTGACATTTTGCAATAAGATTCATGGTGATAATAAGATTAG 2087
consensus_14613#1 GTGACAGAATTTGATCAGCTTGACCTTTTCCA-TAAGATTCATGGTGATAATAAGATTAG 640
************************ **** ** ***************************
consensus_14613#0 GATGTCTCGTACTCAAAAAAAAAAAGGCGAAGGGCGGGAGGTCCATACTGATATATTGAC 2147
consensus_14613#1 GATGTCTCGTACTCATTCTAAAAAAAAAAA------------------------------ 670
*************** ****** *
consensus_14613#0 CGTGCCCGCTAGCCCAGGNAGC 2169
consensus_14613#1 ----------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||