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Oryza sativa
cluster # 14616 cluster # 14616       Sequences # 17       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14616#0 length = 1308 sequences # 4  
consensus_14616#1 length = 1169 sequences # 8  
consensus_14616#2 length = 773 sequences # 3  
consensus_14616#3 length = 670 sequences # 1  
consensus_14616#4 length = 390 sequences # 1  

consensusID : consensus_14616#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1308
fasta sequence
                              [TCTCCCTCTCCAATCTCCCTCTTCCTCTCCTCAGATCGGGGCGCCGGCTGAGACCGAGCGGCGGCTGCTCGTTGCGATCGGGGCAGGACCCCGCTTCTCCCGTCCAATCCGGCGGTGGCTCGGTGACGAGAGTAGGGGCGGCGAGAGCTCGGCTCCTCCCTCGCCTCTTCTCCCCCCCAATCCCGGTGGCAGCGGCGGCGGCGGCTCCGCGACAAGGAAGGGCGGCGGGAGCTTGGTTCCTCCCTCCCCTCTTCTCCCCTTCAATCCCGGCGGCGGCTCGGCGACAAGTAAGGACGGCGGGAGCTCGGCTCCTCCCTCCCCTCTTCTCCTCTTCTCATCCCCGCTTCTCCTCTCTAATCCCGGTGGGGTGGTGTAGGTGCGGGACAAGGGCGGCGGCTCGGCAACGGCGGCTCAGCGGCGACGACGACGACAGCGACATGGGAGGGGCCTTGGCGACTTTGACGACGACCGTGACGACGGAGGGCCTCGTCGACATCGACGGCGCGCGGTGGACGGCGACGAGCGGATCCGGCACCACCTCCTCCATCCACCGCGCCACCTCCATCTCCGCCCCCAGCCACCTCGTCGCCCTTCCCCGCCTCGCTCCCCCAGCCAGGGAAGGGACGGTGGCGCGCGGATCTGCCGCCTCCCGGCCTCGGGAGCGACGGCGGCGCATGAATCCAGCGGCCTCCGTCCTCGGGAGCGCCCTGGCGTGAGCGGGAGTGCCGGCAGCACGCAGATTCGCAACGACGGTGACGGTGGCTGCAACGACGACGACAGCGGCGATGGTAGCTGCGACGACGACGACGGCGATGACAGCGGCTGTGATGAAAACGACAACGCTGTGATGCAAGTAGCGGCGGTGCTCTCTTCCTCTGTCCTCCGCCATCAGCAGCACCAGTATACCC-TGA-TCATAA-GAGCCGTA-GTACTATGGCTGA-TCCTGCACTT-GCTAGTGA-TCCAGAGTTACA-CGGGC-TGTCT-TA-TA-TC-TATGAGAGGAA-TGG-TCGTCATTA-TTGTTTAACCATGGCAACTCCTACTGTAGTACCT-AATCCT-CCAGCCAAATTTTCAGAAAGTGCTTAGACCTTGTATTAGGGATCTTCGAAAAATTGTAATTCTCTTTT-AAGGGCACACAGTAGTATCTCGATATAAACTCTCTGGTAGTCCAATTTTGTAACACCATGTCTTGTACTTAGTCTAGAATGGCTACCATCTATCTTTATGTATGACTACCATATATATCAATGAGAAACCATGTGATCCATCNAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK104074             [TCTCCCTCTCCAATCTCCCTCTTCCTCTCCTCAGATCGGGGCGCCGGCTGAGACCGAGCGGCGGCTGCTCGTTGCGATCGGGGCAGGACCCCGCTTCTCCCGTCCAATCCGGCGGTGGCTCGGTGACGAGAGTAGGGGCGGCGAGAGCTCGGCTCCTCCCTCGCCTCTTCTCCCCCCCAATCCCGGTGGCAGCGGCGGCGGCGGCTCCGCGACAAGGAAGGGCGGCGGGAGCTTGGTTCCTCCCTCCCCTCTTCTCCCCTTCAATCCCGGCGGCGGCTCGGCGACAAGTAAGGACGGCGGGAGCTCGGCTCCTCCCTCCCCTCTTCTCCTCTTCTCATCCCCGCTTCTCCTCTCTAATCCCGGTGGGGTGGTGTAGGTGCGGGACAAGGGCGGCGGCTCGGCAACGGCGGCTCAGCGGCGACGACGACGACAGCGACATGGGAGGGGCCTTGGCGACTTTGACGACGACCGTGACGACGGAGGGCCTCGTCGACATCGACGGCGCGCGGTGGACGGCGACGAGCGGATCCGGCACCACCTCCTCCATCCACCGCGCCACCTCCATCTCCGCCCCCAGCCACCTCGTCGCCCTTCCCCGCCTCGCTCCCCCAGCCAGGGAAGGGACGGTGGCGCGCGGATCTGCCGCCTCCCGGCCTCGGGAGCGACGGCGGCGCATGAATCCAGCGGCCTCCGTCCTCGGGAGCGCCCTGGCGTGAGCGGGAGTGCCGGCAGCACGCAGATTCGCAACGACGGTGACGGTGGCTGCAACGACGACGACAGCGGCGATGGTAGCTGCGACGACGACGACGGCGATGACAGCGGCTGTGATGAAAACGACAACGCTGTGATGCAAGTAGCGGCGGTGCTCTCTTCCTCTGTCCTCCGCCATCAGCAGCACCAGTATACCC TGA TCATAA GAGCCGTA GTACTATGGCTGA TCCTGCACTT GCTAGTGA TCCAGAGTTACA CGGGC TGTCT TA TA TC TATGAGAGGAA TGG TCGTCATTA TTGTTTAACCATGGCAACTCCTACTGTAGTACCT AATCCT CCAGCCAAATTTTCAGAAAGTGCTTAGACCTTGTATTAGGGATCTTCGAAAAATTGTAATTCTCTTTT AAGGGCACACAGTAGTATCTCGATATAAACTCTCTGGTAGT                                                                                                                                                        ]
[-] EMBL CB660943             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ACCTGGTCGCCCTTCCCCGCCTCGCTCCCCCAGCCAGGGAAGGGACGGTGGCGCGCGGATCTGCCGCCTCCCGGCCTCGGGAGCGACGGCGGCGCATGAATCCAGCGGCCTCCGTCCTCGGGAGCGCCCTGGCGTGAGCGGGAGTGCCGGCAGCACGCAGATTCGCAACGACGGTGACGGTGGCTGCAACGACGACGACAGCGGCGATGGTAGCTGCGACGACGACGACGGCGATGACAGCGGCTGTGATGAAAACGACAACGCTGTGATGCAAGTAGCGGCGGTGCTCTCTTCCTCTGTCCTCCGCCATCAGCAGCACCAGTATACCC TGA TCATAA GAGCCGTA GTACTATGGCTGA TCCTGCACTT GCTAGTGA TCCAGAGTTACA CGGGC TGTCT TA TA TC TATGAGAGGAA TGG TCGTCATTA TTGTTTAACCATGGCAACTCCTACTGTAGTACCT AATCCT CCAGCCAAATTTTCAGAAAGTGCTTAGACCTTGTATTAGGGATCTTCGAAAAATTGTAATTCTCTTTT AAGGGCACACAGTAGTATCTCGATATAAACTCTCTGGTAGTCCAATTTTGTAACACCATGTCTTGTACTTAGTCTAGAATGGCTACCATCTATCTTTATGTATGACTACCATATATATCAATGAGAAACCATG                                                            ]
[+] EMBL BI805192             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CCAGTATACCCGTGAGTCATAATGAGCCGTAGGTACTATGGCTGATTCCTGCACTTGGCTAGTGAGTCCAGAGTGACATCGGGCGTGTCTGTAGTAGTCGTATGAGAGGAAGTGGTTCGTCATTAGTTGTTTAACCATGGCAACTCCTACTGTAGTACCTGAATCCTGCCAGCCAATTGTTCAGAAAGTGCTTAGACCTTGTATTAGGGATCTTCGAAAAATTGTAATTCTCTTTTGAAGGGCACACAGTAGTATCTCGATATAAACTCTCTGGTAGTCC ATTTTGTAACACCATGTCTTGTACTTAGTCTAGAATGGCTACCATCTATCTTTATGTATGACTACCATATATATC ATGAGAAACCATGTGATCCATC                                                   ]
[+] EMBL CF329974             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TCT TA TA TC TATGAGAGGAA TGG TCGTCATTA TTGTTTAACCATGGCAACTCCTACTGTAGTATCT AATCCT CCAGCCAAATTTTCAGAAAGTGCTTAGACCTTGTATTAGGGATCTTCGAAAAATTGTAATTCTCTTTT AAGGGCACACAGTAGTATCTCGATATAAACTCTCTGGTAGTCCAATTTTGTAACACCATGTCTTGTACTTAGTCTAGAATGGCTACCATCTATCTTTATGTATGACTACCATATATATCAATGAGAAACCATGTGATCCATCNAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_14616#0 TCTCCCTCTCCAATCTCCCTCTTCCTCTCCTCAGATCGGGGCGCCGGCTGAGACCGAGCG GCGGCTGCTCGTTGCGATCGGGGCAGGACCCCGCTTCTCCCGTCCAATCCGGCGGTGGCT CGGTGACGAGAGTAGGGGCGGCGAGAGCTCGGCTCCTCCCTCGCCTCTTCTCCCCCCCAA TCCCGGTGGCAGCGGCGGCGGCGGCTCCGCGACAAGGAAGGGCGGCGGGAGCTTGGTTCC TCCCTCCCCTCTTCTCCCCTTCAATCCCGGCGGCGGCTCGGCGACAAGTAAGGACGGCGG GAGCTCGGCTCCTCCCTCCCCTCTTCTCCTCTTCTCATCCCCGCTTCTCCTCTCTAATCC CGGTGGGGTGGTGTAGGTGCGGGACAAGGGCGGCGGCTCGGCAACGGCGGCTCAGCGGCG ACGACGACGACAGCGACATGGGAGGGGCCTTGGCGACTTTGACGACGACCGTGACGACGG AGGGCCTCGTCGACATCGACGGCGCGCGGTGGACGGCGACGAGCGGATCCGGCACCACCT CCTCCATCCACCGCGCCACCTCCATCTCCGCCCCCAGCCACCTCGTCGCCCTTCCCCGCC TCGCTCCCCCAGCCAGGGAAGGGACGGTGGCGCGCGGATCTGCCGCCTCCCGGCCTCGGG AGCGACGGCGGCGCATGAATCCAGCGGCCTCCGTCCTCGGGAGCGCCCTGGCGTGAGCGG GAGTGCCGGCAGCACGCAGATTCGCAACGACGGTGACGGTGGCTGCAACGACGACGACAG CGGCGATGGTAGCTGCGACGACGACGACGGCGATGACAGCGGCTGTGATGAAAACGACAA CGCTGTGATGCAAGTAGCGGCGGTGCTCTCTTCCTCTGTCCTCCGCCATCAGCAGCACCA GTATACCCTGATCATAAGAGCCGTAGTACTATGGCTGATCCTGCACTTGCTAGTGATCCA GAGTTACACGGGCTGTCTTATATCTATGAGAGGAATGGTCGTCATTATTGTTTAACCATG GCAACTCCTACTGTAGTACCTAATCCTCCAGCCAAATTTTCAGAAAGTGCTTAGACCTTG TATTAGGGATCTTCGAAAAATTGTAATTCTCTTTTAAGGGCACACAGTAGTATCTCGATA TAAACTCTCTGGTAGTCCAATTTTGTAACACCATGTCTTGTACTTAGTCTAGAATGGCTA CCATCTATCTTTATGTATGACTACCATATATATCAATGAGAAACCATGTGATCCATCNAA AAAAAAAAAAAAAAAAAAAAAAAGGAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_14616#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1169
fasta sequence
                              [CGAGCTCGTCAATYCCCTCTCCAATCTCCCTCTTCCTCTCCTCAGATCGGGGCGCCGGCTGAGACCGAGCGGCGGCTGCTCGTTGCGATCGGGGCAGGACCCCGCTTCTCCCGTCCAATCCGGCGGTGGCTCGGTGACGAGAGTAGGGGCGGCGAGAGCTCGGCTCCTCCCTCGCCTCTTCTCCCCTCCAATCCCGGTGGCAGCGGCGGCGGCGGCTCCGCGACAAGGAAGGGCGGCGGGAGCTTGGTTCCTCCCTCCCCTCTTCTCCCCTTCAATCCCGGCGGCGGCTCGGCGACAAGTGCGGGACAAGGGCGGCGGCTCGGCAACGGCGGCTCAGCGGCGACGACGACGACAGCGACATGGGAGGGGCCTTGGCGACTTTGACGACGACCGTGACGACGGAGGGCCTCGTCGACATCGACGGCGCGCGGTGGACGGCGACGAGCGGATCCGGC-ACCACCTCCTCCATCCACCGCGCCACCTCCATCTCCGCCCCCAGCCACCTCGTCGCCCTTCCCCGCCTCGCTCCCCCAGCCAGGGAAGGGACGGTGGCGCGCGGATCTGCCGCCTCCCGGCCTCGGGAGCGACGGCGGCGCATGAATCCAGCGGCCTCCGTCCTCGGGAGCGCCCTGGCGTGAGCGGGAGTGCCGGCAGCACGCAGATTCGCAACGACGGTGACGGTGGCTGCAACGACGACGACAGCGGCGATGGTAGCTGCGACGACGACGACGGCGATGACAGCGGCTGTGATGAAAACGACAACGCTGTGATGCAAGTAGCGGCGGTGCTCTCTTCCTCTGTCCTCCGCCATCAGCAGCACCAGTATACCCTGATCATAAGAGCCGTAGTACTATGGCTGATCCTGCACTTGCTAGTGATCCAGAGTTACACGGGCTGTCTTATATCTATGAGAGGAATGGTCGTCATTATTGTTTAACCATGGCAACTCCTACTGTAGTACCTAATCCTCCAGCCAAATTTTCAGAAAGTGCTTAGACCTTGTATTAGGGATCTTCGAAAAATTGTAATTCTCTTTTAAGGGCACACAGTAGTATCTCGATATAAACTCTCTGGTAGTCCAATTTTGTAACACCATGTCTTGTACTTAGTCTAGAATGGCTACCATCTATCTTTATGTATGACTACCATATATATCAATGAGAAACCAT]

[+] EMBL BE229491             [CGAGCTCGTCAATYCGGCASSAAATCTCCCTCTTCCTCTCCTCAGATCGGGGCGCCGGCTGAGACCGAGCGGCGBCTGCTCGTTGCGATCGGGGCAGGACCCCGCTTCTCCCGTCCAATCCGGCGGTGGCTCGGTGACGAGAGTAGGGGCGGCGAGAGCTCGGCTCCTCCCTCGCCTCTTCTCCCCTCCAATCCCGGTGGCAGCGGCGGCGGCGGCTCCGCGACAAGGAAGGGCGGCGGGAGCTTGGTTCCTCCCTCCCCTCTTCTCCCCTTCAATCCCGGCGGCGGCTCGGCGACAAGTGCGGGACAAGGGCGGCGGCTCGGCAACGGCGGCTCAGCGGCGACGACGACGACAGCVACATGGGAGGGGCCTT GCGACTTT ACGACGACCGT ACGACGGAGGSYCTCGTCGACATCGACGGCGCGCGGTGGACGGCGACGAGCGDATCCCGCAACAACTTCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK099423             [               CCTCTCCAATCTCCCTCTTCCTCTCCTCAGATCGGGGCGCCGGCTGAGACCGAGCGGCGGCTGCTCGTTGCGATCGGGGCAGGACCCCGCTTCTCCCGTCCAATCCGGCGGTGGCTCGGTGACGAGAGTAGGGGCGGCGAGAGCTCGGCTCCTCCCTCGCCTCTTCTCCCCTCCAATCCCGGTGGCAGCGGCGGCGGCGGCTCCGCGACAAGGAAGGGCGGCGGGAGCTTGGTTCCTCCCTCCCCTCTTCTCCCCTTCAATCCCGGCGGCGGCTCGGCGACAAGTGCGGGACAAGGGCGGCGGCTCGGCAACGGCGGCTCAGCGGCGACGACGACGACAGCGACATGGGAGGGGCCTTGGCGACTTTGACGACGACCGTGACGACGGAGGGCCTCGTCGACATCGACGGCGCGCGGTGGACGGCGACGAGCGGATCCGGC ACCACCTCCTCCATCCACCGCGCCACCTCCATCTCCGCCCCCAGCCACCTCGTCGCCCTTCCCCGCCTCGCTCCCCCAGCCAGGGAAGGGACGGTGGCGCGCGGATCTGCCGCCTCCCGGCCTCGGGAGCGACGGCGGCGCATGAATCCAGCGGCCTCCGTCCTCGGGAGCGCCCTGGCGTGAGCGGGAGTGCCGGCAGCACGCAGATTCGCAACGACGGTGACGGTGGCTGCAACGACGACGACAGCGGCGATGGTAGCTGCGACGACGACGACGGCGATGACAGCGGCTGTGATGAAAACGACAACGCTGTGATGCAAGTAGCGGCGGTGCTCTCTTCCTCTGTCCTCCGCCATCAGCAGCACCAGTATACCCTGATCATAAGAGCCGTAGTACTATGGCTGATCCTGCACTTGCTAGTGATCCAGAGTTACACGGGCTGTCTTATATCTATGAGAGGAATGGTCGTCATTATTGTTTAACCATGGCAACTCCTACTGTAGTACCTAATCCTCCAGCCAAATTTTCAGAAAGTGCTTAGACCTTGTATTAGGGATCTTCGAAAAATTGTAATTCTCTTTTAAGGGCACACAGTAGTATCTCGATATAAACTCTCTGGTAGTCCAATTTTGTAACACCATGTCTTGTACTTAGTCTAGAATGGCTACCATCTATCTTTATGTATGACTACCATATATATCAATGAGAAACCAT]
[+] EMBL AK072795             [               CCTCTCCAATCTCCCTCTTCCTCTCCTCAGATCGGGGCGCCGGCTGAGACCGAGCGGCGGCTGCTCGTTGCGATCGGGGCAGGACCCCGCTTCTCCCGTCCAATCCGGCGGTGGCTCGGTGACGAGAGTAGGGGCGGCGAGAGCTCGGCTCCTCCCTCGCCTCTTCTCCCCTCCAATCCCGGTGGCAGCGGCGGCGGCGGCTCCGCGACAAGGAAGGGCGGCGGGAGCTTGGTTCCTCCCTCCCCTCTTCTCCCCTTCAATCCCGGCGGCGGCTCGGCGACAAGTGCGGGACAAGGGCGGCGGCTCGGCAATGGCGGCTCAGCGGCGACGACGACGACAGCGACATGGGAGGGGCGTTGGCGACTTTGACGACGACCGTGACGACGGAGGGCCTCGTCGACATCGACGGCGCGCGGTGGACGGCGACGAGCTGATCCGGC ACCACCTCCTCCATCCACCGCGCCACCTCCATCTCCGCCCCCAGCCACCTCGTCGCCCTTCCCCGCCTCGCTCCCCCAGCCAGGGAAGGGACGGTGGCGCGCGGATCTGCCGCCTCCCGGCCTCGGGAGCGACGGCGGCGCATGAATCCAGCGGCCTCCGTCCTCGGGAGCGCCCTGGCGTGAGCGGGAGTGCCGGCAGCACGCAGATTCGCAACGACGGTGACGGTGGCTGCAACGACGACGACAGCGGCGATGGTAGCTGCGACGACGACGACGGCGATGACAGCGGCTGTGATGAAAACGACAACGCTGTGATGCAAGTAGCGGCGGTGCTCTCTTCCTCTGTCCTCCGCCATCAGCAGCACCAGTATACCCTGATCATAAGAGCCGTAGTACTATGGCTGATCCTGCACTTGCTAGTGATCCAGAGTTACACGGGCTGTCTTATATCTATGAGAGGAATGGTCGTCATTATTGTTTAACCATGGCAACTCCTACTGTAGTACCTAATCCTCCAGCCAAATTTTCAGAAAGTGCTTAGACCTTGTATTAGGGATCTTCGAAAAATTGTAATTCTCTTTTAAGGGCACACAGTAGTATCTCGATATAAACTCTCTGGTAGTCCAATTTTGTAACACCATGTCTTGTACTTAGTCTAGAATGGCTACCATCTATCTTTATGTATGACTACCATATATATCAATGAGAAACCAT]
[+] EMBL AK102674             [               CCTCTCCAATCTCCCTCTTCCTCTCCTCAGATCGGGGCGCCGGCTGAGACCGAGCGGCGGCTGCTCGTTGCGATCGGGGCAGGACCCCGCTTCTCCCGTCCAATCCGGCGGTGGCTCGGTGACGAGAGTAGGGGCGGCGAGAGCTCGGCTCCTCCCTCGCCTCTTCTCCCCTCCAATCCCGGTGGCAGCGGCGGCGGCGGCTCCGCGACAAGGAAGGGCGGCGGGAGCTTGGTTCCTCCCTCCCCTCTTCTCCCCTTCAATCCCGGCGGCGGCTCGGCGACAAGTGCGGGACAAGGGCGGCGGCTCGGCAACGGCGGCTCAGCGGCGACGACGACGACAGCGACATGGGAGGGGCCTTGGCGACTTTGACGACGACCGTGACGACGGAGGGCCTCGTCGACATCGACGGCGCGCGGTGGACGGCGACGAGCGGATCCGGC ACCACCTCCTCCATCCACCGCGCCACCTCCATCTCCGCCCCCAGCCACCTCGTCGCCCTTCCCCGCCTCGCTCCCCCAGCCAGGGAAGGGACGGTGGCGCGCGGATCTGCCGCCTCCCGGCCTCGGGAGCGACGGCGGCGCATGAATCCAGCGGCCTCCGTCCTCGGGAGCGCCCTGGCGTGAGCGGGAGTGCCGGCAGCACGCAGATTCGCAACGACGGTGACGGTGGCTGCAACGACGACGACAGCGGCGATGGTAGCTGCGACGACGACGACGGCGATGACAGCGGCTGTGATGAAAACGACAACGCTGTGATGCAAGTAGCGGCGGTGCTCTCTTCCTCTGTCCTCCGCCATCAGCAGCACCAGTATACCCTGATCATAAGAGCCGTAGTACTATGGCTGATCCTGCACTTGCTAGTGATCCAGAGTTACACGGGCTGTCTTATATCTATGAGAGGAATGGTCGTCATTATTGTTTAACCATGGCAACTCCTACTGTAGTACCTAATCCTCCAGCCAAATTTTCAGAAAGTGCTTAGACCTTGTATTAGGGATCTTCGAAAAATTGTAATTCTCTTTTAAGGGCACACAGTAGTATCTCGATATAAACTCTCTGGTAGT                                                                                           ]
[+] EMBL AK106207             [                CTCTCCAATCTCCCTCTTCCTCTCCTCAGATCGGGGCGCCGGCTGAGACCGAGCGGCGGCTGCTCGTTGCGATCGGGGCAGGACCCCGCTTCTCCCGTCCAATCCGGCGGTGGCTCGGTGACGAGAGTAGGGGCGGCGAGAGCTCGGCTCCTCCCTCGCCTCTTCTCCCCTCCAATCCCGGTGGCAGCGGCGGCGGCGGCTCCGCGACAAGGAAGGGCGGCGGGAGCTTGGTTCCTCCCTCCCCTCTTCTCCCCTTCAATCCCGGCGGCGGCTCGGCGACAAGTGCGGGACAAGGGCGGCGGCTCGGCAACGGCGGCTCAGCGGCGACGACGACGACAGCGACATGGGAGGGGCCTTGGCGACTTTGACGACGACCGTGACGACGGAGGGCCTCGTCGACATCGACGGCGCGCGGTGGACGGCGACGAGCGGATCCGGC ACCACCTCCTCCATCCACCGCGCCACCTCCATCTCCGCCCCCAGCCACCTCGTCGCCCTTCCCCGCCTCGCTCCCCCAGCCAGGGAAGGGACGGTGGCGCGCGGATCTGCCGCCTCCCGGCCTCGGGAGCGACGGCGGCGCATGAATCCAGCGGCCTCCGTCCTCGGGAGCGCCCTGGCGTGAGCGGGAGTGCCGGCAGCACGCAGATTCGCAACGACGGTGACGGTGGCTGCAACGACGACGACAGCGGCGATGGTAGCTGCGACGACGACGACGGCGATGACAGCGGCTGTGATGAAAACGACAACGCTGTGATGCAAGTAGCGGCGGTGCTCTCTTCCTCTGTCCTCCGCCATCAGCAGCACCAGTATACCCTGATCATAAGAGCCGTAGTACTATGGCTGATCCTGCACTTGCTAGTGATCCAGAGTTACACGGGCTGTCTTATATCTATGAGAGGAATGGTCGTCATTATTGTTTAACCATGGCAACTCCTACTGTAGTACCTAATCCTCCAGCCAAATTTTCAGAAAGTGCTTAGACCTTGTATTAGGGATCTTCGAAAAATTGTAATTCTCTTTTAAGGGCACACAGTAGTATCTCGATATAAACTCTCTGGTAGTCCAATTTTGTAACACCATGTCTTGTACTTAGTCTAGAATGGCTACCATCTATCTTTATGTATGACTACCATATATATCAATGAGAAACCAT]
[+] EMBL CA997888             [                                                                                                                                                                                                                                                                                                                                     ACGGCGGCTCAGCGGCGACGACGACGACAGCGACATGGGAGGGGCCTTGGCGACTTTGACGACGACCGTGACGACGGAGGGCCTCGTCGACATCGACGGCGCGCGGTGGACGGCGACGAGCGGATCCGGC ACCACCTCCTCCATCCACCGCGCCATCNCCATCTCCGCCCCCAGCCACCTCGTCGCCCTTCCCCGCCTCGCTCCCCCAGCCAGGGAAGGGACGGTGGCGCGCGGATCTGCCGCCTCCCGTCCTCGGGAGCGACGGCGGCGCATGAATCCAGCGGCCTCCGTCCTCGGGAGCGCCCTGGCGTGAGCGGGAGTGCCGGTAGCACGCAGATTCGCAACGACGGTGACGGTGGCTGCAACGACGACGACAGCGGCGATGGTAGCTGCGACGACGACGACGGCGATGACAGCGGCTGTGATGAAAACGACAACGCTGTGATGCAAGTAGCGGCGGTGCTCTCTTCCTCTGTCCTCCGCCATCAGCAGCACCAGTATACCCTGATCATAAGAGCCGTAGTACTATGGCTG                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB660942             [                                                                                                                                                                                                                                                                                                                                                                                      GCGACTTTCTCTACGACCGTGACGACGGAGGGCCTCGTCGACATCGACGGCGCGCGGTGGACGGCGACGAGCGGATCCGGC ACCACCTCCTCCATCCACCGCGCCACCTCCATCTCCGCCCCCAGCCACCTCGTCGCCCTTCCCCGCCTCGCTCCCCCAGCCAGGGAAGGGACGGTGGCGCGCGGATCTGCCGCCTCCCGGCCTCGGGAGCGACGGCGGCGCATGAATCCAGCGGCCTCCGTCCTCGGGAGCGCCCTGGCGTGAGCGGGAGTGCCGGCAGCACGCAGATTCGCAACGACGGTGACGGTGGCTGCAACGACGACGACAGCGGCGATGGTAGCTGCGACGACGACGACGGCGATGACAGCGGCTGTGATGAAAACGACAACGCTGTGATGCAAGTAGCGGCGGTGCTCTCTTCCTCTGTCCTCCGCCATCAGCAGCACCAGTATACCCTGATCATAAGAGCCGTAGTACTATGGCTGATCCTGCACTTGCTAGTGATCCAGAGTTACACGGGCTGTCTTATATCTATGAGAGGAATGGTCGTCATTATTGTTTAACCATGGCAACTCCTACTGTAGTACCTAATCCTCCAGCCAAATTTTCAGAAAGTGCTTAGACCTTGTATTAGGGATCTTCGAAAAATTGTAATTCTCTTTTAAGGGCACACAGTAGTATCTCGATATAAACTCTCTGGTAGTCCAATTTTGTAACACCATGTCTTGTACTTAGTCTAGAATGGCTACCATCTATCTTTATGTATGACTACCATATATATCAATGAGAAAACAT]
[+] EMBL CF196367             [                                                                                                                                                                                                                                                                                                                                                                                                          GACGACGGAGGGCCTCGTCGACATCGACGGCGCGCGGTGGACGGCGACGAGCGGATCCGGC ACCACCTCCTCCATCCACCGCGCCACCTCCATCTCCGCCCCCAGCCACCNNNTCGCCCTTCNNNGCCTNNNTCCCCCnnnnnn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]


>consensus_14616#1 CGAGCTCGTCAATYCCCTCTCCAATCTCCCTCTTCCTCTCCTCAGATCGGGGCGCCGGCT GAGACCGAGCGGCGGCTGCTCGTTGCGATCGGGGCAGGACCCCGCTTCTCCCGTCCAATC CGGCGGTGGCTCGGTGACGAGAGTAGGGGCGGCGAGAGCTCGGCTCCTCCCTCGCCTCTT CTCCCCTCCAATCCCGGTGGCAGCGGCGGCGGCGGCTCCGCGACAAGGAAGGGCGGCGGG AGCTTGGTTCCTCCCTCCCCTCTTCTCCCCTTCAATCCCGGCGGCGGCTCGGCGACAAGT GCGGGACAAGGGCGGCGGCTCGGCAACGGCGGCTCAGCGGCGACGACGACGACAGCGACA TGGGAGGGGCCTTGGCGACTTTGACGACGACCGTGACGACGGAGGGCCTCGTCGACATCG ACGGCGCGCGGTGGACGGCGACGAGCGGATCCGGCACCACCTCCTCCATCCACCGCGCCA CCTCCATCTCCGCCCCCAGCCACCTCGTCGCCCTTCCCCGCCTCGCTCCCCCAGCCAGGG AAGGGACGGTGGCGCGCGGATCTGCCGCCTCCCGGCCTCGGGAGCGACGGCGGCGCATGA ATCCAGCGGCCTCCGTCCTCGGGAGCGCCCTGGCGTGAGCGGGAGTGCCGGCAGCACGCA GATTCGCAACGACGGTGACGGTGGCTGCAACGACGACGACAGCGGCGATGGTAGCTGCGA CGACGACGACGGCGATGACAGCGGCTGTGATGAAAACGACAACGCTGTGATGCAAGTAGC GGCGGTGCTCTCTTCCTCTGTCCTCCGCCATCAGCAGCACCAGTATACCCTGATCATAAG AGCCGTAGTACTATGGCTGATCCTGCACTTGCTAGTGATCCAGAGTTACACGGGCTGTCT TATATCTATGAGAGGAATGGTCGTCATTATTGTTTAACCATGGCAACTCCTACTGTAGTA CCTAATCCTCCAGCCAAATTTTCAGAAAGTGCTTAGACCTTGTATTAGGGATCTTCGAAA AATTGTAATTCTCTTTTAAGGGCACACAGTAGTATCTCGATATAAACTCTCTGGTAGTCC AATTTTGTAACACCATGTCTTGTACTTAGTCTAGAATGGCTACCATCTATCTTTATGTAT GACTACCATATATATCAATGAGAAACCAT



consensusID : consensus_14616#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 773
fasta sequence
                              [CTCCATCCACCGCGCCACCTCCATCTCCGCCCCCAGCCACCTCTTCACCCTTCCCCGCCTCGCTCCCCTAGCCAGTGAAGGACGGTGGCGCGCGGATCTGCCGCCTCCCGTCGTCGGGAGCGACGGCGGCGCATGAATCCAGCGGCCTCCGTCCTCGGGAGTGCCCTGGCGTGAGCGGGAGTGCCGGCAGCACGCAGATTCGCAACGACGGTGACGGTGGCTGCAACGACGACGACAGCGGCGATGGTAGCTGCGACGACGACGACGGCGATGACAGCGGCTGTGATGAAAACGACAACGCTGTGATGCAAGTANCGGCGGTGCTCTCTTCCTCTATCCTCCGCCATCAGCAGCACCAGTATACCCTGGGACGCCTACCGACGGTTACTTTTTTGGGGGTGATGTTTCGATTTGCAAATCAAAACAAGATTGCTGCCTGATACAAAACTTAAGTGCTGCTAAGCTCACCTGGAAGATCTTGGTCACGCGGCATCGGGTGAAATTCTGTATGGTTACATTTAATTGGGTTGTAGATTCTGGGTTG-AAATTTTGTGGTGTATTGAATGTTTGGCGGGTTCCGATGGATGCCTATAGGGGTGTAACCTGTGTGCTGTATCGGTTGTTACTGTGTTTGATTGGTGGCCCTATATGGGGCTAACTCTCTTGTTATTGGATACTAATGTAAATGAATATAATATGATTGGGCTGAAAATGGTGTGGTATAATGTTTGGGCCTATGGGCTTTTGCAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL BE041088             [CTCCATCCACCGCGCCACCTCCATCTCCGCCCCCAGCCACCTCTTCACCCTTCCCCGCCTCGCTCCCCTAGCCAGTGAAGGACGGTGGCGCGCGGATCTGCCGCCTCCCGTCGTCGGGAGCGACGGCGGCGCATGAATCCAGCGGCCTCCGTCCTCGGGAGTGCCCTGGCGTGAGCGGGAGTGCCGGCAGCACGCAGATTCGCAACGACGGTGACGGTGGCTGCAACGACGACGACAGCGGCGATGGTAGCTGCGACGACGACGACGGCGATGACAGCGGCTGTGATGAAAACGACAACGCTGTGATGCAAGTAGCGGCGGTGCTCTCTTCCTCTATCCTCCGCCATCAGCAGCACCAGTATACCCTGGGACGCCTACCGACGGTTACTTTTTTGGGGGTGATGTTTCGATTTGCAAATCAAAACAAGATTGCTGCCTGATACAAAACTTAAGTGCTGCTAAGCTCACCTGGAAGATCTTGGTCACGCGGCATCGGGTGAAATTCTGTATGGTTACATTTAATTGGGTTGTAGATTCTGGGTTG AAATTTTGTGGTGTATTGAATGTTTGGCGGGTTCCGATGGATGCCTATAGGGGTGTAACCTGTGTGCTGTATCGGTTGTTACTGTGTTTGATTGGTGGCCCTATATGGGGCTAACTCTCTTGTTATTGG                                                                                                    ]
[+] EMBL CF196321             [                                                                                                              TCCTCGGGAGCGACGGCGGCGCATGAATCCAGCGGCCTCCGTCCTCGGGAGCGCCCTGGCGTGAGCGGGAGTGCCGGCAGCACGCAGATTCGCAACGACGGTGACGGTGGCTGCAACGACGACGACAGCGGCGATGGTAGCTGCGACGACGACGACGGCGATGACAGCGGCTGTGATGAAAACGACAACGCTGTGATGCAAGTANnnncggnnc                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU085832             [                                                                                                                      aaCGACGNCGGCGCATGAATCCAGCGGCNTCCGTCCTCGGAAGTGCCCTGGCGTNACCGGAAGT CCGGCAGCACGCAGATTCGCAACGACGGTGACGGTGGCTGCAACGACGACGACAGCGGCGATGGTAGCTGCGACGACGACGACGGCGATGACAGCGGCTGTGATGAAAACGACAACGCTGTGATGCAAGTANCGGCGGTGCTCTCTTCCTCTATCCTCCGCCATCAGCAGCACCAGTATACCCTGGGACGCCTACCGACGGTTACTTTTTTGGGGGTGATGTTTCGATTTGCAAATCAAAACAAGATTGCTGCCTGATACAAAACTTAAGTGCTGCTAAGCTCACCTGGAAGATCTTGGTCACGCGGCATCGGGTGAAATTCTGTATGGTTACATTTAATTGGGTTGTAGATTCTGGGTTGTAAATTTTGTGTTGTATTGAATGTTTGTCGGGTTCCGATGGATGCTAATAGGGTTGTAACCTGTGTGCTGTATCGGTTGTTACTGTGTTTGATTGTTGGGCCTATATGGGCTTAGCTCTCTTGTTATTTGATACTAATGTAAATGAATATAATATGATTGGGCTGAAAATGGTGTGGTATAATGTTTGGGCCTATGGGCTTTTGCAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_14616#2 CTCCATCCACCGCGCCACCTCCATCTCCGCCCCCAGCCACCTCTTCACCCTTCCCCGCCT CGCTCCCCTAGCCAGTGAAGGACGGTGGCGCGCGGATCTGCCGCCTCCCGTCGTCGGGAG CGACGGCGGCGCATGAATCCAGCGGCCTCCGTCCTCGGGAGTGCCCTGGCGTGAGCGGGA GTGCCGGCAGCACGCAGATTCGCAACGACGGTGACGGTGGCTGCAACGACGACGACAGCG GCGATGGTAGCTGCGACGACGACGACGGCGATGACAGCGGCTGTGATGAAAACGACAACG CTGTGATGCAAGTANCGGCGGTGCTCTCTTCCTCTATCCTCCGCCATCAGCAGCACCAGT ATACCCTGGGACGCCTACCGACGGTTACTTTTTTGGGGGTGATGTTTCGATTTGCAAATC AAAACAAGATTGCTGCCTGATACAAAACTTAAGTGCTGCTAAGCTCACCTGGAAGATCTT GGTCACGCGGCATCGGGTGAAATTCTGTATGGTTACATTTAATTGGGTTGTAGATTCTGG GTTGAAATTTTGTGGTGTATTGAATGTTTGGCGGGTTCCGATGGATGCCTATAGGGGTGT AACCTGTGTGCTGTATCGGTTGTTACTGTGTTTGATTGGTGGCCCTATATGGGGCTAACT CTCTTGTTATTGGATACTAATGTAAATGAATATAATATGATTGGGCTGAAAATGGTGTGG TATAATGTTTGGGCCTATGGGCTTTTGCAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_14616#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 670
fasta sequence
                              [CACCATCCATTCCCCCATCGCCAACATCCCTCTCGTCCTCCGTCCATCGAGCCGCCCCCAGCCACCTCTTCGCCCTTCCCCGCCTCGCTCCCCCAGCCAGGGAAGGACGGTGGCGCGCGGATCCGCCGCCTCCCGTCCTCGGGAGCGACGGCGGCGCATGAATCCAGAGGCCTCCGTCCTTGGGAGCGGCCTGGCGTCAGCGGGAGCGCCGGCAGCACGCGGATCCGCCCGCCTCCGCCCTCCGGAGCGGCGGCGGCGGGCTTAGGCAGGCGGGAGCAAGCGGCTACGATGGCGGCGGCTGCGGCGATGACGACGACGGTGGCTGCAACGATCTTCCATGCCGGGTGTTGAAAGCGACCGCGGCGGCAGGCTCCATCCAAGAAGTGGCCGCGGCGACGGCTCCGTCGAAGAAGCGGCGGCTGCTTCTTCGTCCACGGCGGAAGGGGGAAGGCCCAAGAAACGGCGGCGGATTTTTCGTTCACGACCACACCGAGTCAAGAAGACGCCGGGGGAGGCCAAGAAGCAGCAGGTGGAGACGGGGGGTGGCTGCGGAGCGCCACCGCGACGAGGCCACGAAGGCGAGCCGGTGACCCAAGAAGGCGGCAGCAGCGTACGGGTGCCCGGATTCGCGGACGGAAAAGCCTTATTAACTCATACCCTTAAAGGAATT]

[+] EMBL BE041048             [CACCATCCATTCCCCCATCGCCAACATCCCTCTCGTCCTCCGTCCATCGAGCCGCCCCCAGCCACCTCTTCGCCCTTCCCCGCCTCGCTCCCCCAGCCAGGGAAGGACGGTGGCGCGCGGATCCGCCGCCTCCCGTCCTCGGGAGCGACGGCGGCGCATGAATCCAGAGGCCTCCGTCCTTGGGAGCGGCCTGGCGTCAGCGGGAGCGCCGGCAGCACGCGGATCCGCCCGCCTCCGCCCTCCGGAGCGGCGGCGGCGGGCTTAGGCAGGCGGGAGCAAGCGGCTACGATGGCGGCGGCTGCGGCGATGACGACGACGGTGGCTGCAACGATCTTCCATGCCGGGTGTTGAAAGCGACCGCGGCGGCAGGCTCCATCCAAGAAGTGGCCGCGGCGACGGCTCCGTCGAAGAAGCGGCGGCTGCTTCTTCGTCCACGGCGGAAGGGGGAAGGCCCAAGAAACGGCGGCGGATTTTTCGTTCACGACCACACCGAGTCAAGAAGACGCCGGGGGAGGCCAAGAAGCAGCAGGTGGAGACGGGGGGTGGCTGCGGAGCGCCACCGCGACGAGGCCACGAAGGCGAGCCGGTGACCCAAGAAGGCGGCAGCAGCGTACGGGTGCCCGGATTCGCGGACGGAAAAGCCTTATTAACTCATACCCTTAAAGGAATT]


>consensus_14616#3 CACCATCCATTCCCCCATCGCCAACATCCCTCTCGTCCTCCGTCCATCGAGCCGCCCCCA GCCACCTCTTCGCCCTTCCCCGCCTCGCTCCCCCAGCCAGGGAAGGACGGTGGCGCGCGG ATCCGCCGCCTCCCGTCCTCGGGAGCGACGGCGGCGCATGAATCCAGAGGCCTCCGTCCT TGGGAGCGGCCTGGCGTCAGCGGGAGCGCCGGCAGCACGCGGATCCGCCCGCCTCCGCCC TCCGGAGCGGCGGCGGCGGGCTTAGGCAGGCGGGAGCAAGCGGCTACGATGGCGGCGGCT GCGGCGATGACGACGACGGTGGCTGCAACGATCTTCCATGCCGGGTGTTGAAAGCGACCG CGGCGGCAGGCTCCATCCAAGAAGTGGCCGCGGCGACGGCTCCGTCGAAGAAGCGGCGGC TGCTTCTTCGTCCACGGCGGAAGGGGGAAGGCCCAAGAAACGGCGGCGGATTTTTCGTTC ACGACCACACCGAGTCAAGAAGACGCCGGGGGAGGCCAAGAAGCAGCAGGTGGAGACGGG GGGTGGCTGCGGAGCGCCACCGCGACGAGGCCACGAAGGCGAGCCGGTGACCCAAGAAGG CGGCAGCAGCGTACGGGTGCCCGGATTCGCGGACGGAAAAGCCTTATTAACTCATACCCT TAAAGGAATT



consensusID : consensus_14616#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 390
fasta sequence
                              [AGCTCGGCTCCTCCCTCGCCTCTTCTCCCCTCCAATCCCGGTGGCAGCGGCGGCGGCGGCTCCGCGACAAGGAAGGGCGGCGGGAGCTTGGTTCCTCCCTCCCCTCTTCTCCCCTTCAATCCCGGCGGCGGCTAGGCGACAAGTGCGGGACAAGGGCGGCGGCTCGGCAACGGCGGCTCAGCGGCGACGACGACGACAGCAACAAGGGAGGGGCCTTGGCGACTTTAACGACGACCGCAACGACGGAGGGCCTCGTCGACAACNACGGCGCGCGGTGGACGGCGACGAGCGGATCCGGCAACAACTCCTTCATCCACCGGGCAACTTCATTTCGCCCCAGCAACTNTTAACCTTCCCGCTTGTCCCTAGCAGGAAGACGGTGNGGGGATT]

[+] EMBL C28491               [AGCTCGGCTCCTCCCTCGCCTCTTCTCCCCTCCAATCCCGGTGGCAGCGGCGGCGGCGGCTCCGCGACAAGGAAGGGCGGCGGGAGCTTGGTTCCTCCCTCCCCTCTTCTCCCCTTCAATCCCGGCGGCGGCTAGGCGACAAGTGCGGGACAAGGGCGGCGGCTCGGCAACGGCGGCTCAGCGGCGACGACGACGACAGCAACAAGGGAGGGGCCTTGGCGACTTTAACGACGACCGCAACGACGGAGGGCCTCGTCGACAACNACGGCGCGCGGTGGACGGCGACGAGCGGATCCGGCAACAACTCCTTCATCCACCGGGCAACTTCATTTCGCCCCAGCAACTNTTAACCTTCCCGCTTGTCCCTAGCAGGAAGACGGTGNGGGGATT]


>consensus_14616#4 AGCTCGGCTCCTCCCTCGCCTCTTCTCCCCTCCAATCCCGGTGGCAGCGGCGGCGGCGGC TCCGCGACAAGGAAGGGCGGCGGGAGCTTGGTTCCTCCCTCCCCTCTTCTCCCCTTCAAT CCCGGCGGCGGCTAGGCGACAAGTGCGGGACAAGGGCGGCGGCTCGGCAACGGCGGCTCA GCGGCGACGACGACGACAGCAACAAGGGAGGGGCCTTGGCGACTTTAACGACGACCGCAA CGACGGAGGGCCTCGTCGACAACNACGGCGCGCGGTGGACGGCGACGAGCGGATCCGGCA ACAACTCCTTCATCCACCGGGCAACTTCATTTCGCCCCAGCAACTNTTAACCTTCCCGCT TGTCCCTAGCAGGAAGACGGTGNGGGGATT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14616#0      -----------TCTCCCTCTCCAATCTCCCTCTTCCTCTCCTCAGATCGGGGCGCCGGCT 49
consensus_14616#1      CGAGCTCGTCAATYCCCTCTCCAATCTCCCTCTTCCTCTCCTCAGATCGGGGCGCCGGCT 60
consensus_14616#4      ------------------------------------------------------------
consensus_14616#3      ------------------------------------------------------------
consensus_14616#2      ------------------------------------------------------------
                                                                                   

consensus_14616#0      GAGACCGAGCGGCGGCTGCTCGTTGCGATCGGGGCAGGACCCCGCTTCTCCCGTCCAATC 109
consensus_14616#1      GAGACCGAGCGGCGGCTGCTCGTTGCGATCGGGGCAGGACCCCGCTTCTCCCGTCCAATC 120
consensus_14616#4      ------------------------------------------------------------
consensus_14616#3      ---------------------------CACCATCCATTCCCCCATCGCCAACATCCCTCT 33
consensus_14616#2      ----------------------------------------------------CTCCATCC 8
                                                                                   

consensus_14616#0      CGGCGGTGGCTCGGTGACGAGAGTAGGGGCGGCGAGAGCTCGGCTCCTCCCTCGCCTCTT 169
consensus_14616#1      CGGCGGTGGCTCGGTGACGAGAGTAGGGGCGGCGAGAGCTCGGCTCCTCCCTCGCCTCTT 180
consensus_14616#4      ------------------------------------AGCTCGGCTCCTCCCTCGCCTCTT 24
consensus_14616#3      CGTCCTCCGTCCATCGAGCCGCCCCCAGCCACCTCTTCGCCCTTCCCCGCCTCGCTCCCC 93
consensus_14616#2      ACCGCGCCACCTCCATCTCCGCCCCCAGCCACCTCTTCACCCTTCCCCGCCTCGCTCCCC 68
                                                               *    **  ******  *  

consensus_14616#0      CTCCCCCCCAATCCCGGTGGCA-GCGGCGGCGGCGGCTCC-GCGACAAGGAAGGGCGGCG 227
consensus_14616#1      CTCCCCTCCAATCCCGGTGGCA-GCGGCGGCGGCGGCTCC-GCGACAAGGAAGGGCGGCG 238
consensus_14616#4      CTCCCCTCCAATCCCGGTGGCA-GCGGCGGCGGCGGCTCC-GCGACAAGGAAGGGCGGCG 82
consensus_14616#3      CAGCCAGGGAAGGACGGTGGCGCGCGGATCCGCCGCCTCCCGTCCTCGGGAGCGACGGCG 153
consensus_14616#2      TAGCCAGTGAAGGACGGTGGCGCGCGGATCTGCCGCCTCCCGTCGTCGGGAGCGACGGCG 128
                          **    **   *******  ****    * ** **** *      ***  * *****

consensus_14616#0      GGAGCTTGGTTCCTCCCTCCCCTCTTCTCCCCTTCAATCCCGGCGGCGGCTCGGCGACAA 287
consensus_14616#1      GGAGCTTGGTTCCTCCCTCCCCTCTTCTCCCCTTCAATCCCGGCGGCGGCTCGGCGACAA 298
consensus_14616#4      GGAGCTTGGTTCCTCCCTCCCCTCTTCTCCCCTTCAATCCCGGCGGCGGCTAGGCGACAA 142
consensus_14616#3      GC-GCATGAATCCAGAGGCCTCCGTCCTTGGGAGCGG-CCTGGCGTCAGCGGGAGCGCCG 211
consensus_14616#2      GC-GCATGAATCCAGCGGCCTCCGTCCTCGGGAGTGC-CCTGGCGTGAGCGGGAGTGCCG 186
                       *  ** **  ***     ** *  * **          ** ****   **  *    *  

consensus_14616#0      GTAAGGACGGCGGGAGCTCGGCTCCTCCCTCCCCTCTTCTCCTCTTCTCATCCCCGCTTC 347
consensus_14616#1      GT---------------------------------------------------------- 300
consensus_14616#4      GT---------------------------------------------------------- 144
consensus_14616#3      GCAGCACGCGGATCCGCCCGCCTCCGCCCTCC---------------------------- 243
consensus_14616#2      GCAGCACGCAGATTCGCAACG--------------------------------------- 207
                       *                                                           

consensus_14616#0      TCCTCTCTAATCCCGGTGGGGTGGTGTAGGTGCGGGACAAGGGCGGCGGCT-CGGCAACG 406
consensus_14616#1      -------------------------------GCGGGACAAGGGCGGCGGCT-CGGCAACG 328
consensus_14616#4      -------------------------------GCGGGACAAGGGCGGCGGCT-CGGCAACG 172
consensus_14616#3      ---------GGAGCGGCGGCGGCGGGCTTAGGCAGGCGGGAGCAAGCGGCTACGATGGCG 294
consensus_14616#2      ---------ACGGTGACGGTGGCTGCAACGACGACGACAGCGGCGATGGTAGCTGCGACG 258
                                                          *     *     **   *     **

consensus_14616#0      GCGGCT-CAGCGGCGACGACGACGACAGCGACATGGGAGGGGCCTTG--GCGACT-TTGA 462
consensus_14616#1      GCGGCT-CAGCGGCGACGACGACGACAGCGACATGGGAGGGGCCTTG--GCGACT-TTGA 384
consensus_14616#4      GCGGCT-CAGCGGCGACGACGACGACAGCAACAAGGGAGGGGCCTTG--GCGACT-TTAA 228
consensus_14616#3      GCGGCTGCGGCGATGACGACGACGGTGGCTGCAACG-ATCTTCCATG--CCGGGTGTTGA 351
consensus_14616#2      ACGACGACGGCGATGACAGCGGCTGTGATGAAAACGACAACGCTGTGATGCAAGTANCGG 318
                        ** *  * ***  ***  ** *         *  *      *  **   *   *     

consensus_14616#0      CGACGACCGTGACGACGGAGGGCC-TCGTCGACATCGACGGCGCGCGGTGG-ACGGCGAC 520
consensus_14616#1      CGACGACCGTGACGACGGAGGGCC-TCGTCGACATCGACGGCGCGCGGTGG-ACGGCGAC 442
consensus_14616#4      CGACGACCGCAACGACGGAGGGCC-TCGTCGACAACNACGGCGCGCGGTGG-ACGGCGAC 286
consensus_14616#3      AAGCGACCG---CGGCGGCAGGCT-CCATCCAAGAAGTGGCCGCGGCGACG-GCTCCGTC 406
consensus_14616#2      CGGTGCTCTCTTCCTCTATCCTCCGCCATCAGCAGCACCAGTATACCCTGGGACGCCTAC 378
                           *  *    *  *      *   * **                    *  *  *  *

consensus_14616#0      GAGCGGATCC------GGCACCACCTCCTCCATCCACCGCGCCACCTCCATCTCCGCCCC 574
consensus_14616#1      GAGCGGATCC------GGCACCACCTCCTCCATCCACCGCGCCACCTCCATCTCCGCCCC 496
consensus_14616#4      GAGCGGATCC------GGCAACAACTCCTTCATCCACCG-GGCAACTTCATTTC--GCCC 337
consensus_14616#3      GA--AGAAGC------GGCGGCTGCTTCTTCGTCCACGGCGGAAGGGGGAA----GGCCC 454
consensus_14616#2      CGACGGTTACTTTTTTGGGGGTGATGTTTCGATTTGCAAATCAAAACAAGATTGCTGCCT 438
                            *   *      **          *   *   *      *             ** 

consensus_14616#0      CAGCCACCTCGTCGCCCTTCCCCGCCTCGCTCCCCCAGCCAGGGAAGGGACGGTGGCGCG 634
consensus_14616#1      CAGCCACCTCGTCGCCCTTCCCCGCCTCGCTCCCCCAGCCAGGGAAGGGACGGTGGCGCG 556
consensus_14616#4      CAGCAACTN--TTAACCTTCCCG--CTTGT--CCCTAGC-------AGGAAGACGGTGNG 384
consensus_14616#3      AAGAAACGGCGGCGGATTTTTCG--TTCACGACCACACC--GAGTCAAGAAGACGCCGGG 510
consensus_14616#2      GATACAAAACTTAAGTGCTGCTAAGCTCACCTGGAAGATCTTGGTCACG-CGGCATCGGG 497
                        *   *            *       *                     *  *     * *

consensus_14616#0      CGGATCTGCCGCCTCCCGGCCTCGGGAGCGACGGCGGCGCATGAATCCAGCGGCCTCCGT 694
consensus_14616#1      CGGATCTGCCGCCTCCCGGCCTCGGGAGCGACGGCGGCGCATGAATCCAGCGGCCTCCGT 616
consensus_14616#4      GGGATT------------------------------------------------------ 390
consensus_14616#3      GGAGGCCAAGAAGCAGCAGGTGGAGACGGGGGGTGGCTGCGGAGCGCCACCGCGACGAGG 570
consensus_14616#2      TGAAATTCTGTATGGTTACATTTAATTGGGTTGTAGATTCTGGGTTGAAATTTTGTGGTG 557
                        *                                                          

consensus_14616#0      CCTCGGGAGCGCCCTGGCG-TGAGCGGGAGTGCCGGCAGCACGCAGATTCGCAACGACGG 753
consensus_14616#1      CCTCGGGAGCGCCCTGGCG-TGAGCGGGAGTGCCGGCAGCACGCAGATTCGCAACGACGG 675
consensus_14616#4      ------------------------------------------------------------
consensus_14616#3      CCACGAAGGCGAGCCGGTGACCCAAGAAGGCGGCAGCAGCGTACGGGTGCCCGGATTCGC 630
consensus_14616#2      TATTGAATGTTTGGCGGGTTCCGATGGATGC-CTATAGGGGTGTAACCTGTGTGCTGTAT 616
                                                                                   

consensus_14616#0      TGACGGTGGCTGCAACGACGACGACAGCGGCGATGGTAGCTGCGACGACGACGACGGCGA 813
consensus_14616#1      TGACGGTGGCTGCAACGACGACGACAGCGGCGATGGTAGCTGCGACGACGACGACGGCGA 735
consensus_14616#4      ------------------------------------------------------------
consensus_14616#3      GGACGGAAAAGCCTTATTAACTCATACCCTTAAAGGAATT-------------------- 670
consensus_14616#2      CGGTTGTTACTGTGTTTGATTGGTGGCCCTATATGGGGCTAACTCTCTTGTTATTGGATA 676
                                                                                   

consensus_14616#0      TGACAGCGGCTGTGATGAAAACGACAACGCTGTGATGCAAGTAGCGGCGGTGCTCTCTTC 873
consensus_14616#1      TGACAGCGGCTGTGATGAAAACGACAACGCTGTGATGCAAGTAGCGGCGGTGCTCTCTTC 795
consensus_14616#4      ------------------------------------------------------------
consensus_14616#3      ------------------------------------------------------------
consensus_14616#2      CTAATGTAAATGAATATAATATGATTGGGCTGAAAATGGTGTGGTATAATGTTTGGGCCT 736
                                                                                   

consensus_14616#0      CTCTGTCCTCCGCCATCAGCAGCACCAGTATACCCTGATCATAAGAGCCGTAGTACTATG 933
consensus_14616#1      CTCTGTCCTCCGCCATCAGCAGCACCAGTATACCCTGATCATAAGAGCCGTAGTACTATG 855
consensus_14616#4      ------------------------------------------------------------
consensus_14616#3      ------------------------------------------------------------
consensus_14616#2      ATGGGCTTTTGCAAAAAAAAAAAAAAAAAAAAAAAAA----------------------- 773
                                                                                   

consensus_14616#0      GCTGATCCTGCACTTGCTAGTGATCCAGAGTTACACGGGCTGTCTTATATCTATGAGAGG 993
consensus_14616#1      GCTGATCCTGCACTTGCTAGTGATCCAGAGTTACACGGGCTGTCTTATATCTATGAGAGG 915
consensus_14616#4      ------------------------------------------------------------
consensus_14616#3      ------------------------------------------------------------
consensus_14616#2      ------------------------------------------------------------
                                                                                   

consensus_14616#0      AATGGTCGTCATTATTGTTTAACCATGGCAACTCCTACTGTAGTACCTAATCCTCCAGCC 1053
consensus_14616#1      AATGGTCGTCATTATTGTTTAACCATGGCAACTCCTACTGTAGTACCTAATCCTCCAGCC 975
consensus_14616#4      ------------------------------------------------------------
consensus_14616#3      ------------------------------------------------------------
consensus_14616#2      ------------------------------------------------------------
                                                                                   

consensus_14616#0      AAATTTTCAGAAAGTGCTTAGACCTTGTATTAGGGATCTTCGAAAAATTGTAATTCTCTT 1113
consensus_14616#1      AAATTTTCAGAAAGTGCTTAGACCTTGTATTAGGGATCTTCGAAAAATTGTAATTCTCTT 1035
consensus_14616#4      ------------------------------------------------------------
consensus_14616#3      ------------------------------------------------------------
consensus_14616#2      ------------------------------------------------------------
                                                                                   

consensus_14616#0      TTAAGGGCACACAGTAGTATCTCGATATAAACTCTCTGGTAGTCCAATTTTGTAACACCA 1173
consensus_14616#1      TTAAGGGCACACAGTAGTATCTCGATATAAACTCTCTGGTAGTCCAATTTTGTAACACCA 1095
consensus_14616#4      ------------------------------------------------------------
consensus_14616#3      ------------------------------------------------------------
consensus_14616#2      ------------------------------------------------------------
                                                                                   

consensus_14616#0      TGTCTTGTACTTAGTCTAGAATGGCTACCATCTATCTTTATGTATGACTACCATATATAT 1233
consensus_14616#1      TGTCTTGTACTTAGTCTAGAATGGCTACCATCTATCTTTATGTATGACTACCATATATAT 1155
consensus_14616#4      ------------------------------------------------------------
consensus_14616#3      ------------------------------------------------------------
consensus_14616#2      ------------------------------------------------------------
                                                                                   

consensus_14616#0      CAATGAGAAACCATGTGATCCATCNAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAAAAA 1293
consensus_14616#1      CAATGAGAAACCAT---------------------------------------------- 1169
consensus_14616#4      ------------------------------------------------------------
consensus_14616#3      ------------------------------------------------------------
consensus_14616#2      ------------------------------------------------------------
                                                                                   

consensus_14616#0      AAAAAAAAAAAAAAA 1308
consensus_14616#1      ---------------
consensus_14616#4      ---------------
consensus_14616#3      ---------------
consensus_14616#2      ---------------
                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)