|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14618#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1187 fasta sequence
[GATTCCAATTCCAATTCCACCACCGATCCATCGCGACAGGGAGGAGGCGACGAGGAGAAGCGGCGGCGGCGGCGGCGGCAGCGGGCGGCGATGGATGTGAGCAGGAGGAAGAAGTGGGTGGCGT-GGGTGGCGGCGGTCACCATCTTCGTCGTGCTCATGCTCGTCACCCCGGCCATCCCGCAGAACGAGGAGTACCACGACTTCGCCGACCAGCGCCGCCTCTTCCTCGGGATCCCCAATACGCTGAATGTGATTTCAAACATCCCCTTCTTTTTTGTGGGTGTCGTTGGGCTCGTCTTGTGCCATTACAAAAACTACTTCAGGCTAAACTCGCAAGGGGAGCTCTGGAGTTGGACACTGTTCTTTGCTGGTGTGACTGCTGTTGCTTTTGGTTCATCCTATTATCATCTCAAACCGAATGATGCCACACTAGTTTGGGACAGATTGCCGATGACAATTGCTTTCACATCTGTCATGGCCATTTTCATTATTGAGAGGGTTGATGATAGGGCAGGAACAAAGTCCCTAGCACCTCTTGTTATTGCTGGTGCACTAAGCATCATGTATTGGAGGTTCTTTGACGATCTTCGCCCATATGCAGTAATTCAGTTTGTTCCATGCATTGCAATACCTGTGATGGCTATTGTAATTCCACCAATGTATACACATTCGAGCTATTGGCTGTGGGCAGCAGGATTTTACCTCCTTGCTAAGGTAGAAGAGGCCGC-AGATAAACCTATATAT-AAAT-GGACCCATCAAATTGTT-AGCGGT-CATACTCTT-AAGC-AT-CT-AGCTGCTGCAATGGT-GCCTGTGTTCTTGGCACTCATGCTGGCCAAAAGGACT-GTTGAACC-AGAAAGGGTAAGTTTATT-CCAGCGGTGGAAGGT-CAAGTTGGTTGCAGTGAGAGAGACTCGATT-CAACAAGGACAGGAATACAGTCGACTACAACTATATTGCAGTTTCCACTACACCTGAACCATAGATGTATTGTTATTATTTTTCATGACTTTAATTTCTGTACACATGTAAGAGAAATGGCACCGGCCAGCATAGAAACTAGATCGATCAGTGTACATTACAATACGAGACGCGTCATCGCTGCTAATCAGAACGTGATGGTGTCATGGTGATGTTGTATGATAACCCTTCATAAATAAATCTTGTGCATATTATTCTTGCTCAAAAAAAAAAGAA]
[+] EMBL AK067659 [GATTCCAATTCCAATTCCACCACCGATCCATCGCGACAGGGAGGAGGCGACGAGGAGAAGCGGCGGCGGCGGCGGCGGCAGCGGGCGGCGATGGATGTGAGCAGGAGGAAGAAGTGGGTGGCGT GGGTGGCGGCGGTCACCATCTTCGTCGTGCTCATGCTCGTCACCCCGGCCATCCCGCAGAACGAGGAGTACCACGACTTCGCCGACCAGCGCCGCCTCTTCCTCGGGATCCCCAATACGCTGAATGTGATTTCAAACATCCCCTTCTTTTTTGTGGGTGTCGTTGGGCTCGTCTTGTGCCATTACAAAAACTACTTCAGGCTAAACTCGCAAGGGGAGCTCTGGAGTTGGACACTGTTCTTTGCTGGTGTGACTGCTGTTGCTTTTGGTTCATCCTATTATCATCTCAAACCGAATGATGCCACACTAGTTTGGGACAGATTGCCGATGACAATTGCTTTCACATCTGTCATGGCCATTTTCATTATTGAGAGGGTTGATGATAGGGCAGGAACAAAGTCCCTAGCACCTCTTGTTATTGCTGGTGCACTAAGCATCATGTATTGGAGGTTCTTTGACGATCTTCGCCCATATGCAGTAATTCAGTTTGTTCCATGCATTGCAATACCTGTGATGGCTATTGTAATTCCACCAATGTATACACATTCGAGCTATTGGCTGTGGGCAGCAGGATTTTACCTCCTTGCTAAGGTAGAAGAGGCCGC AGATAAACCTATATAT AAAT GGACCCATCAAATTGTT AGCGGT CATACTCTT AAGC AT CT AGCTGCTGCAATGGT GCCTGTGTTCTTGGCACTCATGCTGGCCAAAAGGACT GTTGAACC AGAAAGGGTAAGTTTATT CCAGCGGTGGAAGGT CAAGTTGGTTGCAGTGAGAGAGACTCGATT CAACAAGGACAGGAATACAGTCGACTACAACTATATTGCAGTTTCCACTACACCTGAACCATAGATGTATTGTTATTATTTTTCATGACTTTAATTTCTGTACACATGTAAGAGAAATGGCACCGGCCAGCATAGAAACTAGATCGATCAGTGTACATTACAATACGAGACGCGTCATCGCTGCTAATCAGAACGTGATGGTGTCATGGTGATGTTGTATGATAACCCTTCATAAATAAATCTTGTGCATATT ]
[+] EMBL CF277090 [ AATTCCAATTCCACCACCGATCCATCGCGACAGGGAGGAGGCGACGAGGAGAAGCGGCGGCGGCGGCGGCGGCAGCGGGCGGCGATGGATGTGAGCAGGAGGAAGAAGTGGGTGGGGTGGGGTGGCGGCGGTCACCATCTTCGTCGTGCTCATGCTCGTCACCCCGGCCATCCCGCAGAACGAGGAGTACCACGACTTCGCCGACCAGCGCCGCCTCTTCCTCGGGATCCCCAATACGCTGAATGTGATTTCAAACATCCCCTTCTTTTTTGTGGGTGTCGTTGGGCTCGTCTTGTGCCATTACAAAAACTACTTCAGGCTAAACTCGCAAGGGGAGCTCTGGAGTTGGACACTGTTCTTTGCTGGTGTGACTGCTGTTGCTTTTGGTTCATCCTATTATCATCTCAAACCGAATGATGCCACACTAGTTTGGGACAGATTGCCGATGACAATTGCTTTCACATCTGTCATGGCCATTTTCATTATTGAGAGGGTTGATGATAGGGCAGGAACAAAGTCCCTAGCACCTCTTGTT ]
[+] EMBL CB657795 [ ATCGCGACAGGGAGGAGGCGACGAGGAGAAGCGGCGGCGGCGGCGGCGGCAGCGGGCGGCGATGGATGTGAGCAGGAGGAAGAAGTGGGTGGCGT GGGTGGCGGCGGTCACCATCTTCGTCGTGCTCATGCTCGTCACCCCGGCCATCCCGCAGAACGAGGAGTACCACGACTTCGCCGACCAGCGCCGCCTCTTCCTCGGGATCCCCAATACGCTGAATGTGATTTCAAACATCCCCTTCTTTTTTGTGGGTGTCGTTGGGCTCGTCTTGTGCCATTACAAAAACTACTTCAGGCTAAACTCGCAAGGGGAGCTCTGGAGTTGGACACTGTTCTTTGCTGGTGTGACTGCTGTTGCTTTTGGTTCATCCTATTATCATCTCAAACCGAATGATGCCACACTAGTTTGGGACAGATTGCCGATGACAATTGCTTTCACATCTGTCATGGCCATTTTCATTATTGAGAGGGTTGATGATAGGGCAGGAACAAAGTCCCTAGCACCTCTTGTTATTGCTGGTGCACTAAGCATCATGTATTGGAGGTTCTTTGACGATCTTCGCCCATATGCAGTAATTCAGTTTGTTCCATGCATTGCAATACCTGTGATGGCTATTGTAATTCCACCAATGTATACACATTCGAGCTATTGGCTGTGGGCAGCAGGATTTTACCTCCTTGCTAAGGTAGAAGAGGCCGC AGATAAACCTATATAT AAAT GGACCCATCAAATTGTT AGCGGT CATACTCTT AAGC AT CT AGCTGCTGCAATGGT GCCTGTGTTCTTGGCACTC ]
[+] EMBL CB665196 [ CGCGACCGTGAGGAGGCGACGAGGAGAAGCGGCGGCGGCGGCGGCGGCAGCGGGCGGCGATGGATGTGAGCAGGAGGAACAAGTGGGTGGCGT GGGTGGCGGCGGTCACCATCTTCGTCGTGCTCATGCTCGTCACCCCGGCCATCCCGCAGAACGAGGAGTACCACGACTTCGCCGACCAGCGCCGCCTCTTCCTCGGGATCCCCAATACGCTGAATGTGATTTCAAACATCCCCTTCTTTTTTGTGGGTGTCGTTGGGCTCGTCTTGTGCCATTACAAAAACTACTTCAGGCTAAACTCGCAAGGGGAGCTCTGGAGTTGGACACTGTTCTTTGCTGGTGTGACTGCTGTTGCTTTTGGTTCATCCTATTATCATCTCAAACCGAATGATGCCACACTAGTTTGGGACAGATTGCCGATGACAATTGCTTTCACATCTGTCATGGCCATTTTCATTATTGAGAGGGTTGATGATAGGGCAGGAACAAAGTCCCTAGCACCTCTTGTTATTGCTGGTGCACTAAGCATCATGTATTGGAGGTTCTTTGACGATCTTCGCCCATATGCAGTAATTCAGTTTGTTCCATGCATTGCAATACCTGTGATGGCTATTGTAATTCCACCAATGTATACACATTCGAGCTATTGGCTGTGGGCAGCAGGATTTTACCTCCTTGCTAAGGTAGAAGAGGCCGC AGATAAACCTATATAT AAAT GGACCCATCAAATTGTT AGCGGT CATACTCTT AAGC AT CT AGCTGCTGCAATGGT GCCT ]
[+] EMBL CB667303 [ GGGAGGAGGCGACGAGGAGAAGCGGCGGCGGCGGCGGCGGCAGCGGGCGGCGATGGATGTGAGCAGGAGGAAGAAGTGGGTGGCGT GGGTGGCGGCGGTCACCATCTTCGTCGTGCTCATGCTCGTCACCCCGGCCATCCCGCAGAACGAGGAGTACCACGACTTCGCCGACCAGCGCCGCCTCTTCCTCGGGATCCCCAATACGCTGAATGTGATTTCAAACATCCCCTTCTTTTTTGTGGGTGTCGTTGGGCTCGTCTTGTGCCATTACAAAAACTACTTCAGGCTAAACTCGCAAGGGGAGCTCTGGAGTTGGACACTGTTCTTTGCTGGTGTGACTGCTGTTGCTTTTGGTTCATCCTATTATCATCTCAAACCGAATGATGCCACACTAGTTTGGGACAGATTGCCGATGACAATTGCTTTCACATCTGTCATGGCCATTTTCATTATTGAGAGGGTTGATGATAGGGCAGGAACAAAGTCCCTAGCACCTCTTGTTATTGCTGGTGCACTAAGCATCATGTATTGGAGGTTCTTTGACGATCTTCGCCCATATGCAGTAATTCAGTTTGTTCCATGCATTGCAATACCTGTGATGGCTATTGTAATTCCACCAATGTATACACATTCGAGCTATTGGCTGTGGGCAGCACGATTTT ]
[+] EMBL AA751944 [ GCGGCGGTC CCATCTTCATCGTGCTCATGCTCGTCACCCCGGCCATCCCGCAGAACGAGGAGTACCACGACTTCGCCGACCAGCGCCGCCTCTTCCTCGGGATCCCCAATACGCTGAATGTGATTTCAAACATCCCCTTCTTTTTTGTGGGTGTCGTTGGGCTCGTCTTGTGCCATTACAAAAACTACTTCAGGCTAAACTCGCAAGGGGAGCTCTGGAGTTGGACACTGTTCTTTGCTGGTGTGACTGCTGTTGCTTTTGGTTCATCCTATTATCATCTCNNNCCNAATGATGCCACACTAGTTTGGGACAGATTACCGATGACAATTGCTTTCACATCTGTCATGGCCATTTTCATTATTGAGAGGGTTGATGATAGGGCAGGAACAAAGTCCCTAGCACCTCTTGTTATTGCTGGTGCACTAAGCATCATGTATTGGAGGTTCTTTGACGATCTTCNCCCATATGCANTAATTCANTT ]
[+] EMBL AA749656 [ CTTTTTTGTGGGTGTCGTTGGGCTCGTCTTGTGCCATTACAAAAACTACTTCAGGCTAAACTCGCAAGGGGAGCTCTGGAGTTGGACACTGTTCTTTGCTGGTGTGACTGCTGTTGCTTTTGGTTCATCCTATTATCANCTCAAACCGAATG TGCCACACTAGTTTGGGACAGATTACCGATG ]
[-] EMBL CB657796 [ CTTTTGGTTCATCNTATTATCATCTCAAACCGAATGATGCCACACTAGTTTGGGACAGATTGCCGATGACAATTGCTTTCACATCTGTCATGGCCATTTTCATTATTGAGAGGGTTGATGATAGGGCAGGAACAAAGTCCCTAGCACCTCTTGTTATTGCTGGTGCACTAAGCATCATGTATTGGAGGTTCTTTGACGATCTTCGCCCATATGCAGTAATTCAGTTTGTTCCATGCATTGCAATACCTGTGATGGCTATTGTAATTCCACCAATGTATACACATTCGAGCTATTGGCTGTGGGCAGCAGGATTTTACCTCCTTGCTAAGGTAGAAGAGGCCGC AGATAAACCTATATAT AAAT GGACCCATCAAATTGTT AGCGGT CATACTCTT AAGC AT CT AGCTGCTGCAATGGT GCCTGTGTTCTTGGCACTCATGCTGGCCAAAAGGACT GTTGAACC AGAAAGGGTAAGTTTATT CCAGCGGTGGAAGGT CAAGTTGGTTGCAGTGAGAGAGACTCGATT CAACAAGGACAGGAATACAGTCGACTACAACTATATTGCAGTTTCCACTACACCTGAACCATAGATGTATTGTTATTATTTTTCATGACTTTAATTTCTGTACACATGTAAGAGAAATGGCACCGGCCAGCATAGAAACTAGATCGATCAGTGTACATTACAATACGAGACGCGTCATCGCTGCTAATCAGAACGTGATGGTGTCATGGTGATGTTGTATGATAACCCTTCATAAATAAATCTTGTGCATAT ]
[-] EMBL CB665197 [ CTTTTGGTTCATCCTATTATCATCTCAAACCGAATGATGCCACACTAGTTTGGGACAGATTGCCGATGACAATTGCTTTCACATCTGTCATGGCCATTTTCATTATTGAGAGGGTTGATGATAGGGCAGGAACAAAGTCCCTAGCACCTCTTGTTATTGCTGGTGCACTAAGCATCATGTATTGGAGGTTCTTTGACGATCTTCGCCCATATGCAGTAATTCAGTTTGTTCCATGCATTGCAATACCTGTGATGGCTATTGTAATTCCACCAATGTATACACATTCGAGCTATTGGCTGTGGGCAGCAGGATTTTACCTCCTTGCTAAGGTAGAAGAGGCCGC AGATAAACCTATATAT AAAT GGACCCATCAAATTGTT AGCGGT CATACTCTT AAGC AT CT AGCTGCTGCAATGGT GCCTGTGTTCTTGGCACTCATGCTGGCCAAAAGGACT GTTGAACC AGAAAGGGTAAGTTTATT CCAGCGGTGGAAGGT CAAGTTGGTTGCAGTGAGAGAGACTCGATT CAACAAGGACAGGAATACAGTCGACTACAACTATATTGCAGTTTCCACTACACCTGAACCATAGATGTATTGTTATTATTTTTCATGACTTTAATTTCTGTACACATGTAAGAGAAATGGCACCGGCCAGCATAGAAACTAGATCGATCAGTGTACATTACAATACGAGACGCGTCATCGCTGCTAATCAGAACGTGATGGTGTCATGGTGATGTTGTATGATAACCCTTCATAAATAAATCTT ]
[-] EMBL CB667304 [ TTATTGAGAGGGTTGATGATAGGGCAGGAACAAAGTCCCTAGCACCTCTTGTTATTGCTGGTGCACTAAGCATCATGTATTGGAGGTTCTTTGACGATCTTCGCCCATATGCAGTAATTCAGTTTGTTCCATGCATTGCAATACCTGTGATGGCTATTGTAATTCCACCAATGTATACACATTCGAGCTATTGGCTGTGGGCAGCAGGATTTTACCTCCTTGCTAAGGTAGAAGAGGCCGC AGATAAACCTATATAT AAAT GGACCCATCAAATTGTT AGCGGT CATACTCTT AAGC AT CT AGCTGCTGCAATGGT GCCTGTGTTCTTGGCACTCATGCTGGCCAAAAGGACT GTTGAACC AGAAAGGGTAAGTTTATT CCAGCGGTGGAAGGT CAAGTTGGTTGCAGTGAGAGAGACTCGATT CAACAAGGACAGGAATACAGTCGACTACAACTATATTGCAGTTTCCACTACACCTGAACCATAGATGTATTGTTATTATTTTTCATGACTTTAATTTCTGTACACATGTAAGAGAAATGGCACCGGCCAGCATAGAAACTAGATCGATCAGTGTACATTACAATACGAGACGCGTCATCGCTGCTAATCAGAACGTGATGGTGTCATGGTGATGTTGTATGATAACCCTTCATAAATAAATCTTGTGCATATTATTCTTGCTCAAAAAAAAAAGA ]
[+] EMBL CB001008 [ GAGAGGGTTGATGATAGGGCAGGAACAAAGTCCCTAGCACCTCTTGTTATTGCTGGTGCACTAAGCATCATGTATTGGAGGTTCTTTGACGATCTTCGCCCATATGCAGTAATTCAGTTTGTTCCATGCATTGCAATACCTGTGATGGCTATTGTAATTCCACCAATGTATACACATTCGAGCTATTGGCTGTGGGCAGCAGGATTTTACCTCCTTGCTAAGGTAGAAGAGGCCGC AGATAAACCTATATAT AAAT GGACCCATCAAATTGTT AGCGGT CATACTCTT AAGC AT CT AGCTGCTGCAATGGT GCCTGTGTTCTTGGCACTCATGCTGGCCAAAAGGACT GTTGAACC AGAAAGGGTAAGTTTATT CCAGCGGTGGAAGGT CAAGTTGGTTGCAGTGAGAGAGACTCGATT CAACAAGGACAGGAATACAGTCGACTACAACTATATTGCAGTTTCCACTACACCTGAACCATAGATGTATTGTTATTATTTTTCATGACTTTAATTTCTGTACACATGTAAGAGAAATGGCACCGGCCAGCATAGAAACTAGATCGATCAGTGTACATTACAATACGAGACGCGTCATCGCTGCTAATCAGAACGTGATGGTGTCATGGTGATGTTGTATGATAACCCTTCATAAATAAATCTTGTGCATATTATTCTTG ]
[+] EMBL OSR01171A [ TCTTTGACGATCTTCGCCCATATNCAGTAATTCAGTTTGTNCCATGCATTGCAATACCTGTNATGGCTATTGTAATTCCACCAATGTATACACATTCGAGCTATTGGCTGTGGGCAGCAGGATTTTACCTCCTTGCTAAGGTAGAAGAGGCCGC AGATAAACCTATATAT AAAT GGACCCATCAAATTGTT AGCGGT CATACTCTT AAGC AT CT AGCTGCTGCAATGGT GCCTGTNTTCTTGGCACTCATGCTGGCCAAAAGGACT GTTGAACC AGAAAGGGTAAGTTTATT CCAGCGGTGGAAGGT CAAGTTGGTTGCAGTNAGAGAGACTCGATT CAACAAGGACAGGAATACAGTCGACTACAACTATATTGCAGTTTCCACTACAACTGAACCATAGATGTATTGTTATTATTTTTCATGACTTTAATTTCTGTACACATGTAAGAG AATGG ACCGG CAG ATAGA ]
[-] EMBL CF277091 [ CAGTTTGTTCCATGCATTGCAATACCTGTGATGGCTATTGTAATTCCACCAATGTATACACATTCGAGCTATTGGCTGTGGGCAGCAGGATTTTACCTCCTTGCTAAGGTAGAAGAGGCCGC AGATAAACCTATATAT AAAT GGACCCATCAAATTGTT AGCGGT CATACTCTT AAGC AT CT AGCTGCTGCAATGGT GCCTGTGTTCTTGGCACTCATGCTGGCCAAAAGGACT GTTGAACC AGAAAGGGTAAGTTTATT CCAGCGGTGGAAGGT CAAGTTGGTTGCAGTGAGAGAGACTCGATT CAACAAGGACAGGAATACAGTCGACTACAACTATATTGCAGTTTCCACTACACCTGAACCATAGATGTATTGTTATTATTTTTCATGACTTTAATTTCTGTACACATGTAAGAGAAATGGCACCGGCCAGCATAGAAACTAGATCGATCAGTGTACATTACAATACGAGACGCGTCATCGCTGCTAATCAGAACGTGATGGTGTCATGGTGATGTTGTATGATAACCCTTCATAAATAAATCTTGTGCATATTAaaaaa ]
[+] EMBL BI809864 [ tgggTTGGCTGTGGCCACCAGGATTTTACCTCCCTGCTAAGGTAGAAGAGCCCGCTAGATAAACCTATATAT AAATGGGACCCATCAAATTGTT AGCGGTGCATACTCTTGAAGCTAT CTGAGCTGCTGCAATGGTGGCCTGTGTTCTTGGCACTCATGCTGGCCAAAAGGACTGGTTGAACCTAGAAAGGGTAAGTTTATT CCAGCGGTGGAA GT CAAGTTGGTTGCAGTGAGAGAGACTCGATTGCAACAAGGACAGGAAT ]
[+] EMBL AU031644 [ AACCTATATATAAAATGGGACCCATCAAATTGTTAAGCGGT CATACTCTTAAAGC ATNCT AGCTGCTGCAATGGT GCCTGTGTTCTTGGCACTCATGCTGGCCAAAAGGACT GTTGAACC AGAAAGGGTAAGTTTATTCCCAGCGGTGGAAGGTCCAAGTTGGTTGCAGTGAGAGAGACTCGATT CAACAAGGACAGGAATACAGTCGACTACAACTATATTGCAGTTTCCACTACACCTGAACCATAGATGTATTGTTATTATTTTTCATGACTTTAATTTCTGTACACATGTAAGAGAAATGGCACCGGCCAGCATAGAAACTAGATCGATCAGTGTACATTACAATACGAGACGCGTCATCGCTGCTAATCAGAACGTGATGGTGTCATGGTGATGTTGTATGATAACCCTTCATAAATAAATCTTGTGCATATTATTCTTGCTCAAAAAAAAAA ]
[-] EMBL CF337403 [ ATATAT AAAT GGACCCATCAAATTGTT AGCGGT CATACTCTT AAGC AT CT AGCTGCTGCAATGGT GCCTGTGTTCTTGGCACTCATGCTGGCCAAAAGGACT GTTGAACC AGAAAGGGTAAGTTTATT CCAGCGGTGGAAGGT CAAGTTGGTTGCAGTGAGAGAGACTCGATT CAACAAGGACAGGAATACAGTCGACTACAACTATATTGCAGTTTCCACTACACCTGAACCATAGATGTATTGTTATTATTTTTCATGACTTTAATTTCTGTACACATGTAAGAGAAATGGCACCGGCCAGCATAGAAACTAGATCGATCAGTGTACATTACAATACGAGACGCGTCATCGCTGCTAATCAGAACGTGATGGTGTCATGGTGATGTTGTATGATAACCCTTCATAAATAAATCTTGTGCATATTATTCTTGCTCAAAAAAAAAAAAA]
consensusID : consensus_14618#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 503 fasta sequence
[TTCGAGCTATTGGCTGTGGGCAGCAGGATTTTACCTCCTTGCTAAGGTAGAAGAGGCCGCAGATAAACCTATATATAAATGGACCCATCAAATTGTTAGCGGTCATACTCTTAAGCATCTAGCTGCTGCAATGGTGCCTGTGTTCTTGGCACTCGTGCTGGCCCAAAGGACTGTTGAACCAGAAAGGGTAAGTTTATTCCAGCGGTGGAAGGTCAAGTTGGTTGCAGTGAGAGAGACTCGATTCAACAAGGACAGGAATACAGTCGACTACAACTATATTGCAGTTTCCACTACACCTGAACCATAGATGTATTGTTATTATTTTTCATGACTTTAATTTCTGTACACATGTAAGAGAAATGGCACCGGCCAGCATAGAAACTAGATCGATCAGTGTACATTACAATACGAGACGCGTCATCGCTGCTAATCAGAACGTGATGGTGTCATGGTGATGTTGTATGATAACCCCTTCATAAATAAATCTTGTGCCAAAAAAAAAA]
[+] EMBL BQ907586 [TTCGAGCTATTGGCTGTGGGCAGCAGGATTTTACCTCCTTGCTAAGGTAGAAGAGGCCGCAGATAAACCTATATATAAATGGACCCATCAAATTGTTAGCGGTCATACTCTTAAGCATCTAGCTGCTGCAATGGTGCCTGTGTTCTTGGCACTCGTGCTGGCCCAAAGGACTGTTGAACCAGAAAGGGTAAGTTTATTCCAGCGGTGGAAGGTCAAGTTGGTTGCAGTGAGAGAGACTCGATTCAACAAGGACAGGAATACAGTCGACTACAACTATATTGCAGTTTCCACTACACCTGAACCATAGATGTATTGTTATTATTTTTCATGACTTTAATTTCTGTACACATGTAAGAGAAATGGCACCGGCCAGCATAGAAACTAGATCGATCAGTGTACATTACAATACGAGACGCGTCATCGCTGCTAATCAGAACGTGATGGTGTCATGGTGATGTTGTATGATAACCCCTTCATAAATAAATCTTGTGCCAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14618#0 GATTCCAATTCCAATTCCACCACCGATCCATCGCGACAGGGAGGAGGCGACGAGGAGAAG 60
consensus_14618#1 ------------------------------------------------------------
consensus_14618#0 CGGCGGCGGCGGCGGCGGCAGCGGGCGGCGATGGATGTGAGCAGGAGGAAGAAGTGGGTG 120
consensus_14618#1 ------------------------------------------------------------
consensus_14618#0 GCGTGGGTGGCGGCGGTCACCATCTTCGTCGTGCTCATGCTCGTCACCCCGGCCATCCCG 180
consensus_14618#1 ------------------------------------------------------------
consensus_14618#0 CAGAACGAGGAGTACCACGACTTCGCCGACCAGCGCCGCCTCTTCCTCGGGATCCCCAAT 240
consensus_14618#1 ------------------------------------------------------------
consensus_14618#0 ACGCTGAATGTGATTTCAAACATCCCCTTCTTTTTTGTGGGTGTCGTTGGGCTCGTCTTG 300
consensus_14618#1 ------------------------------------------------------------
consensus_14618#0 TGCCATTACAAAAACTACTTCAGGCTAAACTCGCAAGGGGAGCTCTGGAGTTGGACACTG 360
consensus_14618#1 ------------------------------------------------------------
consensus_14618#0 TTCTTTGCTGGTGTGACTGCTGTTGCTTTTGGTTCATCCTATTATCATCTCAAACCGAAT 420
consensus_14618#1 ------------------------------------------------------------
consensus_14618#0 GATGCCACACTAGTTTGGGACAGATTGCCGATGACAATTGCTTTCACATCTGTCATGGCC 480
consensus_14618#1 ------------------------------------------------------------
consensus_14618#0 ATTTTCATTATTGAGAGGGTTGATGATAGGGCAGGAACAAAGTCCCTAGCACCTCTTGTT 540
consensus_14618#1 ------------------------------------------------------------
consensus_14618#0 ATTGCTGGTGCACTAAGCATCATGTATTGGAGGTTCTTTGACGATCTTCGCCCATATGCA 600
consensus_14618#1 ------------------------------------------------------------
consensus_14618#0 GTAATTCAGTTTGTTCCATGCATTGCAATACCTGTGATGGCTATTGTAATTCCACCAATG 660
consensus_14618#1 ------------------------------------------------------------
consensus_14618#0 TATACACATTCGAGCTATTGGCTGTGGGCAGCAGGATTTTACCTCCTTGCTAAGGTAGAA 720
consensus_14618#1 --------TTCGAGCTATTGGCTGTGGGCAGCAGGATTTTACCTCCTTGCTAAGGTAGAA 52
****************************************************
consensus_14618#0 GAGGCCGCAGATAAACCTATATATAAATGGACCCATCAAATTGTTAGCGGTCATACTCTT 780
consensus_14618#1 GAGGCCGCAGATAAACCTATATATAAATGGACCCATCAAATTGTTAGCGGTCATACTCTT 112
************************************************************
consensus_14618#0 AAGCATCTAGCTGCTGCAATGGTGCCTGTGTTCTTGGCACTCATGCTGGCCAAAAGGACT 840
consensus_14618#1 AAGCATCTAGCTGCTGCAATGGTGCCTGTGTTCTTGGCACTCGTGCTGGCCCAAAGGACT 172
****************************************** ******** ********
consensus_14618#0 GTTGAACCAGAAAGGGTAAGTTTATTCCAGCGGTGGAAGGTCAAGTTGGTTGCAGTGAGA 900
consensus_14618#1 GTTGAACCAGAAAGGGTAAGTTTATTCCAGCGGTGGAAGGTCAAGTTGGTTGCAGTGAGA 232
************************************************************
consensus_14618#0 GAGACTCGATTCAACAAGGACAGGAATACAGTCGACTACAACTATATTGCAGTTTCCACT 960
consensus_14618#1 GAGACTCGATTCAACAAGGACAGGAATACAGTCGACTACAACTATATTGCAGTTTCCACT 292
************************************************************
consensus_14618#0 ACACCTGAACCATAGATGTATTGTTATTATTTTTCATGACTTTAATTTCTGTACACATGT 1020
consensus_14618#1 ACACCTGAACCATAGATGTATTGTTATTATTTTTCATGACTTTAATTTCTGTACACATGT 352
************************************************************
consensus_14618#0 AAGAGAAATGGCACCGGCCAGCATAGAAACTAGATCGATCAGTGTACATTACAATACGAG 1080
consensus_14618#1 AAGAGAAATGGCACCGGCCAGCATAGAAACTAGATCGATCAGTGTACATTACAATACGAG 412
************************************************************
consensus_14618#0 ACGCGTCATCGCTGCTAATCAGAACGTGATGGTGTCATGGTGATGTTGTATGATAACCC- 1139
consensus_14618#1 ACGCGTCATCGCTGCTAATCAGAACGTGATGGTGTCATGGTGATGTTGTATGATAACCCC 472
***********************************************************
consensus_14618#0 TTCATAAATAAATCTTGTGCATATTATTCTTGCTCAAAAAAAAAAGAA 1187
consensus_14618#1 TTCATAAATAAATCTTGTGC--------------CAAAAAAAAAA--- 503
******************** ***********
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||