cluster # 14627

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Oryza sativa
cluster # 14627 cluster # 14627 Sequences # 17 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14627#0 length = 1490 sequences # 13
consensus_14627#1 length = 799 sequences # 1

consensus_14627#2 length = 675 sequences # 2
consensus_14627#3 length = 187 sequences # 1

consensusID : consensus_14627#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1490
fasta sequence

                              [TATAGGTGAGTTAGCTTCCTTCCTGCATCTCTTGGCTTCTTCTTCTTCTTCTTCTTTTATACCCTTCTCTTGTTCGCTTGCGGCTCGGAGAAGAGGAGGAGAGGAGGGGGGCAAGGCAAGCAAATGCTCGGCGCCGCTCCGGCGTA-TTTTGGTGGAATAGTAACTTAATATAGAGTTCTGGGACAGAAAATTATGGAGAGGGAAATTTCTGCCTTATATGAACCAAAAAGAAACAATGAAATAAGAATTTTTGAGAGTTCAGATGAGATGTCAACAGATCTGGCTGAGTATATCTCGCAAGTTTCAGAAATATCTGTCAAAGAAAGGGGATACTTTGCTATTGCCCTTTCTGGAGGTCCCCTAGTCAGTTTTTTGGGGAAACTTTGTGAAGCGCCATACAACAAGACCTTGGATTGGTCTAAATGGTACATCTTCTGGTCTGATGAGCGTGCTGTAGCAAAGAATCATGCAGAGAGTAATTATAGGATAACAAAAGAAGGATTCCTGTCCAAGGTACCTATTCTCAATGGCCATGTCTACTCTATAAACGACAACGCGACGGTGGAGGATGCCGCAACAGATTACGAATTTGTCATCAGGCAGCTGGTCAAGGTCCGCACTATTGGAGTCTCCGAAAGCAACGATTGCCCCAAGTTCGATCTAATCCTGCTCAGCATGGGTTCTGATGGACATGTGGCTTCATTGTTCCCCAACCATCCATCCCTTGAGCTGAAAGATGACTGGATCACCTACATCACCGACTCTCCCCAGCCTCCACCTGAGCGGATCACCTTCACTCTCCCTGTGATAAACTCGGCTTCGAACATCGCAATAGTGACTACCGGTGACGATAAATCGGAGGCTGTCCATTTGGCCATTTCTGACAATGCAGATGGTCCAGAAGCCCCCTCATCGCTGCCAGCAAGAATGGTTCAGCCAACAGACGGCAAGCTGGTGTGGTTTTTGGACAAGTCAGCTGCGTCCTCTCTGGATGCCGAGAACGATGACGCCTTTGAGCAGCATCGCGAGTACTAACTCCAATCGTCGAAAGAACATTCCTTTTGCTGTGGATGAAGGTGTGTGCGTGTGTAAGTAGG-CGGTTTGGTATGAT-CGAATTCAGGATGTTTTGCCTTCCAGTTTAGCAGAATGCTTGTTGCATTAGTTTTTTTGTGGAGGGTTTTGTTCAGGGAGAGCCTTGAGTGTGTTTTGGTCGTTTTGGCAAATTGGAGATGGTTTTAGAGCGAAGAGGATTGAGACGTCAGAACTGAGAACACCCAAATTTGATTAGGGGTGGTATGATATTATGTGCTACATTATATTTAGTTCAATCAAAGTTAGTTCAAGCAA---AAGGTGGAAGAAGCAGAGGCTTTCTGTTAATTTTGTTTCCTTGTGATGTTGCCGGTTCGAGTATAGAAAAATATGATCACAAACTTGATATTTTTAACAAAATCGTCGGGCAATCATTTGCTTGATTGCTAAAAAAAAAAAAA]

[+] EMBL AK070405             [TATAGGTGAGTTAGCTTCCTTCCTGCATCTCTTGGCTTCTTCTTCTTCTTCTTCTTTTATACCCTTCTCTTGTTCGCTTGCGGCTCGGAGAAGAGGAGGAGAGGAGGGGGGCAAGGCAAGCAAATGCTCGGCGCCGCTCCGGCGTA TTTTGGTGGAATAGTAACTTAATATAGAGTTCTGGGACAGAAAATTATGGAGAGGGAAATTTCTGCCTTATATGAACCAAAAAGAAACAATGAAATAAGAATTTTTGAGAGTTCAGATGAGATGTCAACAGATCTGGCTGAGTATATCTCGCAAGTTTCAGAAATATCTGTCAAAGAAAGGGGATACTTTGCTATTGCCCTTTCTGGAGGTCCCCTAGTCAGTTTTTTGGGGAAACTTTGTGAAGCGCCATACAACAAGACCTTGGATTGGTCTAAATGGTACATCTTCTGGTCTGATGAGCGTGCTGTAGCAAAGAATCATGCAGAGAGTAATTATAGGATAACAAAAGAAGGATTCCTGTCCAAGGTACCTATTCTCAATGGCCATGTCTACTCTATAAACGACAACGCGACGGTGGAGGATGCCGCAACAGATTACGAATTTGTCATCAGGCAGCTGGTCAAGGTCCGCACTATTGGAGTCTCCGAAAGCAACGATTGCCCCAAGTTCGATCTAATCCTGCTCAGCATGGGTTCTGATGGACATGTGGCTTCATTGTTCCCCAACCATCCATCCCTTGAGCTGAAAGATGACTGGATCACCTACATCACCGACTCTCCCCAGCCTCCACCTGAGCGGATCACCTTCACTCTCCCTGTGATAAACTCGGCTTCGAACATCGCAATAGTGACTACCGGTGACGATAAATCGGAGGCTGTCCATTTGGCCATTTCTGACAATGCAGATGGTCCAGAAGCCCCCTCATCGCTGCCAGCAAGAATGGTTCAGCCAACAGACGGCAAGCTGGTGTGGTTTTTGGACAAGTCAGCTGCGTCCTCTCTGGATGCCGAGAACGATGACGCCTTTGAGCAGCATCGCGAGTACTAACTCCAATCGTCGAAAGAACATTCCTTTTGCTGTGGATGAAGGTGTGTGCGTGTGTAAGTAGG CGGTTTGGTATGAT CGAATTCAGGATGTTTTGCCTTCCAGTTTAGCAGAATGCTTGTTGCATTAGTTTTTTTGTGGAGGGTTTTGTTCAGGGAGAGCCTTGAGTGTGTTTTGGTCGTTTTGGCAAATTGGAGATGGTTTTAGAGCGAAGAGGATTGAGACGTCAGAACTGAGAACACCCAAATTTGATTAGGGGTGGTATGATATTATGTGCTACATTATATTTAGTTCAATCA                                                                                                                                                                  ]
[+] EMBL AU065188             [                                                              CCTTCTCTTGTTCGCTTGCGGCTCGGAGAAGAGGAGGAGAGGAGGGGGGCAAGGCAAGCAAATGCTCGGCGCCGCTCCGG NTANTTTTGGTGGAATAGTAACTTAATATAGAGTTCTGGGACAGAAAATTATGGAGAGGGAAATTTCTGCCTTATATGAACCAAAAAGAAACAATGAAATAAGAATTTTTGAGAGTTCAGATGAGATGTCAACAGATCTGGCTGAGTATATCTCGCAAGTTTCAGAAATATCTGTCAAAGAAAGGGGATACTTTGCTATTGCCCTTTCTGGAGGTCCCCTAGTCAGTTTTTTGGGGAAACTTTGTGAAGCGCCATACAACAAGACCTTGGATTGGTCTAAATGGTACATCTTCTGGTCTGATGAGCGTGCTGTAGCAAAGAATCATGCAGAGAGT ATTATAGGAT ACCAAAGAAGG NTCCTGTCC AGG ACC A TCNC ATGGCagca                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB685031             [                                                                                        AGAACCTGAGGAGAGGAGGGGGGCAAGGCAAGCAAATGCTCGGCGCCGCTCCGGCGTA TTTTGGTGGAATAGTAACTTAATATAGAGTTCTGGGACAGAAAATTATGGAGAGGGAAATTTCTGCCTTATATGAACCAAAAAGAAACAATGAAATAAGAATTTTTGAGAGTTCAGATGAGATGTCAACAGATCTGGCTGAGTATATCTCGCAAGTTTCAGAAATATCTGTCAAAGAAAGGGGATACTTTGCTATTGCCCTTTCTGGAGGTCCCCTAGTCAGTTTTTTGGGGAAACTTTGTGAAGCGCCATACAACAAGACCTTGGATTGGTCTAAATGGTACATCTTCTGGTCTGATGAGCGTGCTGTAGCAAAGAATCATGCAGAGAGTAATTATAGGATAACAAAAGAAGGATTCCTGTCCAAGGTACCTATTCTCAATGGCCATGTCTACTCTATAAACGACAACGCGACGGTGGAGGATGCCGCAACAGATTACGAATTTGTCATCAGGCAGCTGGTCAAGGTCCGCACTATTGGAGTCTCCGAAAGCAACGATTGCCCCAAGTTCGATCTAATCCTGCTCAGCATGGGTTCTGATGGACATGTGGCTTCATTGTTCCCCAACCATCCATCCCTTGAGCTGAAAGATGACTGGATCACCTACATCACCGACTCTCCCCAGCCTCCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK059691             [                                                                                                                                                                                                                                                                                                                                                                                                                     GACCTTGGATTGGTCTAAATGGTACATCTTCTGGTCTGATGAGCGTGCTGTAGCAAAGAATCATGCAGAGAGTAATTATAGGATAACAAAAGAAGGATTCCTGTCCAAGGTACCTATTCTCAATGGCCATGTCTACTCTATAAACGACAACGCGACGGTGGAGGATGCCGCAACAGATTACGAATTTGTCATCAGGCAGCTGGTCAAGGTCCGCACTATTGGAGTCTCCGAAAGCAACGATTGCCCCAAGTTCGATCTAATCCTGCTCAGCATGGGTTCTGATGGACATGTGGCTTCATTGTTCCCCAACCATCCATCCCTTGAGCTGAAAGATGACTGGATCACCTACATCACCGACTCTCCCCAGCCTCCACCTGAGCGGATCACCTTCACTCTCCCTGTGATAAACTCGGCTTCGAACATCGCAATAGTGACTACCGGTGACGATAAATCGGAGGCTGTCCATTTGGCCATTTCTGACAATGCAGATGGTCCAGAAGCCCCCTCATCGCTGCCAGCAAGAATGGTTCAGCCAACAGACGGCAAGCTGGTGTGGTTTTTGGACAAGTCAGCTGCGTCCTCTCTGGATGCCGAGAACGATGACGCCTTTGAGCAGCATCGCGAGTACTAACTCCAATCGTCGAAAGAACATTCCTTTTGCTGTGGATGAAGGTGTGTGCGTGTGTAAGTAGG CGGTTTGGTATGAT CGAATTCAGGATGTTTTGCCTTCCAGTTTAGCAGAATGCTTGTTGCATTAGTTTTTTTGTGGAGGGTTTTGTTCAGGGAGAGCCTTGAGTGTGTTTTGGTCGTTTTGGCAAATTGGAGATGGTTTTAGAGCGAAGAGGATTGAGACGTCAGAACTGAGAACACCCAAATTTGATTAGGGGTGGTATGATATTATGTGCTACATTATATTTAGTTCAATCAAAGT                                                                                                                                                              ]
[-] EMBL CB652285             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TATTCTCAATGGCCATGTCTACTCTATAAACGACAACGCGACGGTGGAGGATGCCGCAACAGATTACGAATTTGTCATCAGGCAGCTGGTCAAGGTCCGCACTATTGGAGTCTCCGAAAGCAACGATTGCCCCAAGTTCGATCTAATCCTGCTCAGCATGGGTTCTGATGGACATGTGGCTTCATTGTTCCCCAACCATCCATCCCTTGAGCTGAAAGATGACTGGATCACCTACATCACCGACTCTCCCCAGCCTCCACCTGAGCGGATCACCTTCACTCTCCCTGTGATAAACTCGGCTTCGAACATCGCAATAGTGACTACCGGTGACGATAAATCGGAGGCTGTCCATTTGGCCATTTCTGACAATGCAGATGGTCCAGAAGCCCCCTCATCGCTGCCAGCAAGAATGGTTCAGCCAACAGACGGCAAGCTGGTGTGGTTTTTGGACAAGTCAGCTGCGTCCTCTCTGGATGCCGAGAACGATGACGCCTTTGAGCAGCATCGCGAGTACTAACTCCAATCGTCGAAAGAACATTCCTTTTGCTGTGGATGAAGGTGTGTGCGTGTGTAAGTAGG CGGTTTGGTATGAT CGAATTCAGGATGTTTTGCCTTCCAGTTTAGCAGAATGCTTGTTGCATTAGTTTTTTTGTGGAGGGTTTTGTTCAGGGAGAGCCTTGAGTGTGTTTTGGTCGTTTTGGCAAATTGGAGATGGTTTTAGAGCGAAGAGGATTGAGACGTCAGAACTGAGAACACCCAAATTTGATTAGGGGTGGTATGATATTATGTGCTACATTATATTTAGTTCAATCAAAGTT                                                                                                                                                             ]
[-] EMBL CB662226             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CGCAACAGATTACGAATTTGTCATCAGGCAGCTGGTCAAGGTCCGCACTATTGGAGTCTCTGAAAGCAACGATTGCCCCAAGTTCGATCTAATCCTGCTCAGCATGGGTTCTGATGGACATGTGGCTTCATTGTTCCCCAACCATCCATCCCTTGAGCTGAAAGATGACTGGATCACCTACATCACCGACTCTCCCCAGCCTCCTCTTGAGCGGATCACCTTCACTCTCCCTGTGATAAACTCGGCTTCGAACATCGCAATAGTGACTACCGGTGACGATAAATCGGAGGCTGTCCATTTGGCCATTTCTGACAATGCAGATGGTCCAGAAGCCCCCTCATCGTTGCCAGCAAGAATGGTTCAGCCAACAGACGGCAAGCTGGTGTGGTTTTTGGACAAGTCAGCTGCGTCCTCTCTGGATGCCGAGAACGATGACGCCTTTGAGCAGCATCGCGAGTACTAACTCCAATCGTCGAAAGAACATTCCTTTTGCTGTGGATGAAGGTGTGTGCGTGTGTAAGTAGGTCGGTTTGGTATGAT CGAATTCAGGATGTTTTGCCTTCCAGTTTAGCAGAATGCTTGTTGCATTAGTTTTTTTGTGGAGGGTTTTGTTCAGGGAGAGCCTTGAGTGTGTTTTGGTCGTTTTGGCAAATTGGAGATGGTTTTAGAGCGAAGAGGATTGAGACGTCAGAACTGAGAACACCCAAATTTGATTAGGGGTGGTATGATATTATGTGCTACATTATATTTAGTTCAATCAAAGTTAGTTCAA                                                                                                                                                      ]
[+] EMBL CB681520             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CCCTCCTCTCTGCCAGCAAGAATGGTTCAGCCAACAGACGGCAAGCTGGTGTGGTTTTTGGACAAGTCAGCTGCGTCCTCTCTGGATGCCGAGAACGATGACGCCTTTGAGCAGCATCGCGAGTACTAACTCCAATCGTCGAAAGAACATTCCTTTTGCTGTGGATGAAGGTGTGTGCGTGTGTAAGTAGG CGGTTTGGTATGAT CGAATTCAGGATGTTTTGCCTTCCAGTTTAGCAGAATGCTTGTTGCATTAGTTTTTTTGTGGAGGGTTTTGTTCAGGGAGAGCCTTGAGTGTGTTTTGGTCGGTTTGGCAAATTGGAGATGGTTTTAAAGCGAAGAGGATTGAGACGTCAGAACTGACAACACCCAAATTTGATTATGGGTGGTATGATATTATGTGCTACATTATATTTAGTTCAATCAAAGT                                                                                                                                                              ]
[-] EMBL CF320825             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGTTCAGCCAACAGACGGCAAGCTGGTGTGGTTTTTGGACAAGTCAGCTGGGTCCTTTTTGGATGCCGAGAACGATGACGCCTTTGAACAGCATCGCGAGTACTAACTCCAATTGTTGAAAGAACATTCCTTTTGCTGTGGATAAAGGTGTGTGCGTGTGTAAGTAGG CGGTTTGGTATGAT CGAATTCAGGATGTTTTGCCTTCCAGTTTAACAAAATGCTTGTTGCATTAGTTTTTTTGTGGAGGGT                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU165895             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CGGCAAGCTGGTGTGGTTTTTGGACAAGTCAGCTGCGTCCTCTCTGGATGCCGAGAACGATGACGCCTTTGAGCAGCATCNCGAGTACTAACTCCAATCGTCGAAAGAACATTCCTTTTGCTGTGGATGAAGGTGTGTGCGTGTGTAAGTAGG CGGTTTGGTATGATCCGAATTCAGGATGTTTTGCCTTCCAGTTTAGCAGAATGCTTGTTGCATTAGTTTTTTTGTGGAGGGTTTTGTTCAGGGAGAGCCTTGAGTGTGTTTTGGTCGTTTTGGCAAATTGGAGATGGTTTTAGAGCGAAGAGGATTGAGACGTCAGAACTGAGAACACCCAAATTTGATTAGGGGTGGTATGATATTATGTGCTACATTATATTTAGTTCAATCAAAGTTAGTTCAAGCAAGTCAAGGTGGAAGAAGCAGAGGCTTTCTGTTAATTTTGTTTCCTTGTGATGTTGCCGGTTCGAGTATAGAAAAATATGATCACAAACTTGATATTTTTAACAAAATCGTCGGGCAATCATTTGCTTGATTGCTAAAAAAAAAAAAA]
[-] EMBL CF278419             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GATGACGCCTTTGAGCAGCATCGCGAGTACTAACTCCAATCGTCGAAAGAACATTCCTTTTGCTGTGGATGAAGGTGTGTGCGTGTGTAAGTAGG CGGTTTGGTATGAT CGAATTCAGGATGTTTTGCCTTCCAGTTTAGCAGAATGCTTGTTGCATTAGTTTTTTTGTGGAGGGTTTTGTTCAGGGAGAGCCTTGAGTGTGTTTTGGTCGTTTTGGCAAATTGGAGATGGTTTTAGAGCGAAGAGGATTGAGACGTCAGAACTGAGAACACCCAAATTTGATTAGGGGTGGTATGATATTATGTGCTACATTATATTTAGTTCAATCAAAGTTAGTTCAAGCAA   AAaaa                                                                                                                                          ]
[+] EMBL BM293902             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTTAGAGCGAAGAGGATTGAGACGTCAGAACTGANAACA CCAAATTTGATTAGGGGTGGTATGATATTATGTGCTACATTATATTTAGTTCAATCNAAATTAGTTCAAGCAAGTCAAGGTGGAAGAAGCAGAGGCTTTCTGTTAATTTTGTTTCCTTGTGATGTTGCCGGTTCGAGTATA                                                                              ]
[+] EMBL BM293904             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGCGAAGAGGATTGAGACGTCAGAACTGAGAACA CCAAATTTGATTAGGGGTGGTATGATATTATGTGCTACATTATATTTAGTTCAATCAAAATTAGTTCAAGCAAGTCAAGGTGGAAGAAGCAGAGGCTTTCTGTTAATTTTGTTTCCTTGTGATGTTGCCGGTTCGAGTATAGAAAAATATGATCACAAACTTGATATTTTa                                                ]
[-] EMBL AU165072             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GCGAAGAGGATTGAGAAGTCAGAACTGAGAACACCCAAATTTGATTAGGGGTGGGATGATATTATGTGCTACATTATATTTAGTTCAATCAAAGTTAGTTCAAGCAAGTCAAGGTGGAAGAAGCAGAGGCTTTCTGTTAATTTTGTTTCCTTGTGATGTTGCCGGTTCGAGTATAGAAAAATATGATCACAAACTTGATATTTTTAAAAAA                                          ]




>consensus_14627#0
TATAGGTGAGTTAGCTTCCTTCCTGCATCTCTTGGCTTCTTCTTCTTCTTCTTCTTTTAT
ACCCTTCTCTTGTTCGCTTGCGGCTCGGAGAAGAGGAGGAGAGGAGGGGGGCAAGGCAAG
CAAATGCTCGGCGCCGCTCCGGCGTATTTTGGTGGAATAGTAACTTAATATAGAGTTCTG
GGACAGAAAATTATGGAGAGGGAAATTTCTGCCTTATATGAACCAAAAAGAAACAATGAA
ATAAGAATTTTTGAGAGTTCAGATGAGATGTCAACAGATCTGGCTGAGTATATCTCGCAA
GTTTCAGAAATATCTGTCAAAGAAAGGGGATACTTTGCTATTGCCCTTTCTGGAGGTCCC
CTAGTCAGTTTTTTGGGGAAACTTTGTGAAGCGCCATACAACAAGACCTTGGATTGGTCT
AAATGGTACATCTTCTGGTCTGATGAGCGTGCTGTAGCAAAGAATCATGCAGAGAGTAAT
TATAGGATAACAAAAGAAGGATTCCTGTCCAAGGTACCTATTCTCAATGGCCATGTCTAC
TCTATAAACGACAACGCGACGGTGGAGGATGCCGCAACAGATTACGAATTTGTCATCAGG
CAGCTGGTCAAGGTCCGCACTATTGGAGTCTCCGAAAGCAACGATTGCCCCAAGTTCGAT
CTAATCCTGCTCAGCATGGGTTCTGATGGACATGTGGCTTCATTGTTCCCCAACCATCCA
TCCCTTGAGCTGAAAGATGACTGGATCACCTACATCACCGACTCTCCCCAGCCTCCACCT
GAGCGGATCACCTTCACTCTCCCTGTGATAAACTCGGCTTCGAACATCGCAATAGTGACT
ACCGGTGACGATAAATCGGAGGCTGTCCATTTGGCCATTTCTGACAATGCAGATGGTCCA
GAAGCCCCCTCATCGCTGCCAGCAAGAATGGTTCAGCCAACAGACGGCAAGCTGGTGTGG
TTTTTGGACAAGTCAGCTGCGTCCTCTCTGGATGCCGAGAACGATGACGCCTTTGAGCAG
CATCGCGAGTACTAACTCCAATCGTCGAAAGAACATTCCTTTTGCTGTGGATGAAGGTGT
GTGCGTGTGTAAGTAGGCGGTTTGGTATGATCGAATTCAGGATGTTTTGCCTTCCAGTTT
AGCAGAATGCTTGTTGCATTAGTTTTTTTGTGGAGGGTTTTGTTCAGGGAGAGCCTTGAG
TGTGTTTTGGTCGTTTTGGCAAATTGGAGATGGTTTTAGAGCGAAGAGGATTGAGACGTC
AGAACTGAGAACACCCAAATTTGATTAGGGGTGGTATGATATTATGTGCTACATTATATT
TAGTTCAATCAAAGTTAGTTCAAGCAAAAGGTGGAAGAAGCAGAGGCTTTCTGTTAATTT
TGTTTCCTTGTGATGTTGCCGGTTCGAGTATAGAAAAATATGATCACAAACTTGATATTT
TTAACAAAATCGTCGGGCAATCATTTGCTTGATTGCTAAAAAAAAAAAAA

consensusID : consensus_14627#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 799
fasta sequence

                              [CAGGATCACGTCTGGCTAATTTTGTCAGAGTAAAAGTTTATCCAAATGGGTGTCCTTTAGTCACATGATTTACATAGCATGTTCTTCCATTGCTCTATATTAATGGGACACTTAATCCAAGCAGTTCAGGAAATTTCTGGGTATCCAGCTAGTTTTCAGAAGGATGGTGACATTTAGTGGCATCTAAAAGCTCTATTTAAGTTGGCACATTCCCTATTCTTGCTAGTGTTAATGTTGCATGAGATTATTGCAAGCATTTGTTTTTGTGCACAGGCTTGGGCCTTTGGTTATAGAATAGGTTTTATTGTATGCCTGTGCCATTGCCATTTCATACTACACAAATTCCCATGTCTGGTTTATCCTGCACTATATAAGCAAATAAAATGTGGCAATTGTTTGTCGGTTTCAGTTATAAGGTGATCCATGATGATGTAGAAAGAATCGTGTGTTGCCACTGTAAATTGAATAAGAATCCGCGGGGGCCTCCCCTGCTGTATCTTGATAAAAAAAAACATCACTGTAAATTATGGTTTAGATAACTTATTCACTTACTATTTATGCTAAGATAATGATCTGTTGCATTTACATGGTTTCTTCTAGGTACCTATTCTCAATGGCCATGTCTACTCTATAAACGACAACGCGACGGTGGAGGATGCCGCAACAGATTACGAATTTGTCATCAGGCAGCTGGTCAAGGTCCGCACTATTGGAGTCTCCGAAAGCAACGATTGCCCCAAGTTCGATCTAATCCTGCTCAGCATGGGTTCTGATGGACATGTGGCTTCATTGTTCCCCA]

[+] EMBL CB662225             [CAGGATCACGTCTGGCTAATTTTGTCAGAGTAAAAGTTTATCCAAATGGGTGTCCTTTAGTCACATGATTTACATAGCATGTTCTTCCATTGCTCTATATTAATGGGACACTTAATCCAAGCAGTTCAGGAAATTTCTGGGTATCCAGCTAGTTTTCAGAAGGATGGTGACATTTAGTGGCATCTAAAAGCTCTATTTAAGTTGGCACATTCCCTATTCTTGCTAGTGTTAATGTTGCATGAGATTATTGCAAGCATTTGTTTTTGTGCACAGGCTTGGGCCTTTGGTTATAGAATAGGTTTTATTGTATGCCTGTGCCATTGCCATTTCATACTACACAAATTCCCATGTCTGGTTTATCCTGCACTATATAAGCAAATAAAATGTGGCAATTGTTTGTCGGTTTCAGTTATAAGGTGATCCATGATGATGTAGAAAGAATCGTGTGTTGCCACTGTAAATTGAATAAGAATCCGCGGGGGCCTCCCCTGCTGTATCTTGATAAAAAAAAACATCACTGTAAATTATGGTTTAGATAACTTATTCACTTACTATTTATGCTAAGATAATGATCTGTTGCATTTACATGGTTTCTTCTAGGTACCTATTCTCAATGGCCATGTCTACTCTATAAACGACAACGCGACGGTGGAGGATGCCGCAACAGATTACGAATTTGTCATCAGGCAGCTGGTCAAGGTCCGCACTATTGGAGTCTCCGAAAGCAACGATTGCCCCAAGTTCGATCTAATCCTGCTCAGCATGGGTTCTGATGGACATGTGGCTTCATTGTTCCCCA]




>consensus_14627#1
CAGGATCACGTCTGGCTAATTTTGTCAGAGTAAAAGTTTATCCAAATGGGTGTCCTTTAG
TCACATGATTTACATAGCATGTTCTTCCATTGCTCTATATTAATGGGACACTTAATCCAA
GCAGTTCAGGAAATTTCTGGGTATCCAGCTAGTTTTCAGAAGGATGGTGACATTTAGTGG
CATCTAAAAGCTCTATTTAAGTTGGCACATTCCCTATTCTTGCTAGTGTTAATGTTGCAT
GAGATTATTGCAAGCATTTGTTTTTGTGCACAGGCTTGGGCCTTTGGTTATAGAATAGGT
TTTATTGTATGCCTGTGCCATTGCCATTTCATACTACACAAATTCCCATGTCTGGTTTAT
CCTGCACTATATAAGCAAATAAAATGTGGCAATTGTTTGTCGGTTTCAGTTATAAGGTGA
TCCATGATGATGTAGAAAGAATCGTGTGTTGCCACTGTAAATTGAATAAGAATCCGCGGG
GGCCTCCCCTGCTGTATCTTGATAAAAAAAAACATCACTGTAAATTATGGTTTAGATAAC
TTATTCACTTACTATTTATGCTAAGATAATGATCTGTTGCATTTACATGGTTTCTTCTAG
GTACCTATTCTCAATGGCCATGTCTACTCTATAAACGACAACGCGACGGTGGAGGATGCC
GCAACAGATTACGAATTTGTCATCAGGCAGCTGGTCAAGGTCCGCACTATTGGAGTCTCC
GAAAGCAACGATTGCCCCAAGTTCGATCTAATCCTGCTCAGCATGGGTTCTGATGGACAT
GTGGCTTCATTGTTCCCCA

consensusID : consensus_14627#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 675
fasta sequence

                              [TGAAGGAGTAGAAAGGCCTCTTCTTCTTCTTCTTCTTTTATACCCTTCTCTTGTTCGCTTGCGGCTCGGAGAAGAGGAGGAGAGGAGGGGGGCAAGGCAAGCAAATGCTCGGCGCCGCTCCGGCGTATTTTGGTGGAATAGTAACTTAATATAGAGTCCTGGGACAGAAAATTATGGAGAGGGAAATTTCTGCCTTATATGAACCAAAAAGAAACAATGAAATAAGAATTTTTGAGAGTTCAGATGAGATGTCAACAGATCTGGCTGAGTATATCTCGCAAGTTTCAGAAATATCTGTCAAAGAAAGGGGATACTTTGCTATTGCCCTTTCTGGAGGTCCCCTAGTCAGTTTTTTGGGGAAACTTTGTGAAGCGCCATACAACAAGACCTTGGATTGGTCTAAATGGTACATCTTCTGGTCTGATGAGCGTGCTGTAGCAAAGAATCATGCAGAGAGTAATTATAGGATAACAAAAGAAGGATTCCTGTCCAAGGTACCTATTCTCAATGGCCATGTCTACTCTATAAACGACAACGCGACGGTGGAGGATGCCGCAACAGATTACGAATTTGTCATCAGGCAGCTGGTCAAGGTCCGCACTATTTGGAGTCTCCGAAAGCAACGATTGCCCCAAGTTCGATCTAATCCTGCTCAGCATGGGGTTCTGATGGACA]

[+] EMBL CF278418             [TGAAGGAGTAGAAAGGCCTCTTCTTCTTCTTCTTCTTTTATACCCTTCTCTTGTTCGCTTGCGGCTCGGAGAAGAGGAGGAGAGGAGGGGGGCAAGGCAAGCAAATGCTCGGCGCCGCTCCGGCGTATTTTGGTGGAATAGTAACTTAATATAGAGTCCTGGGACAGAAAATTATGGAGAGGGAAATTTCTGCCTTATATGAACCAAAAAGAAACAATGAAATAAGAATTTTTGAGAGTTCAGATGAGATGTCAACAGATCTGGCTGAGTATATCTCGCAAGTTTCAGAAATATCTGTCAAAGAAAGGGGATACTTTGCTATTGCCCTTTCTGGAGGTCCCCTAGTCAGTTTTTTGGGGAAACTTTGTGAAGCGCCATACAACAAGACCTTGGATTGGTCTAAATGGTACATCTTCTGGTCTGATGAGCGTGCTGTAGCAAAGAATCATGCAGAGAGTAATTATAGGATAACAAAAGAAGGATTCCTGTCCAAGGTACCTATTCTCAATGGCCATGTCTACTCTATAAACGACAACGCGACGGTGGAGGATGCCGCAACAGATTACGAATTTGTCATCAGGCAGCTGGTCAAGGTCCGCACTATTTGGAGTCTCCGAAAGCAACGATTGCCCCAAGTTCGATCTAATCCTGCTCAGCATGGGGTTCTGATGGACA]
[+] EMBL CF320824             [                                                                                                                                                                                                                                                                                                                                                                                    CGCCATACAACAAGACCTTGGATTGGTCTAAATGGTACATCTTCTGGTCTGATGAGCGTGCTGTAACAAAGAATCATGCAGAGAGTAATTATAGGATAACAAAAGAAGGATTCCTGTCCAAGGTACCTATTCTCGATGGCCATGTCTAC                                                                                                                                                          ]




>consensus_14627#2
TGAAGGAGTAGAAAGGCCTCTTCTTCTTCTTCTTCTTTTATACCCTTCTCTTGTTCGCTT
GCGGCTCGGAGAAGAGGAGGAGAGGAGGGGGGCAAGGCAAGCAAATGCTCGGCGCCGCTC
CGGCGTATTTTGGTGGAATAGTAACTTAATATAGAGTCCTGGGACAGAAAATTATGGAGA
GGGAAATTTCTGCCTTATATGAACCAAAAAGAAACAATGAAATAAGAATTTTTGAGAGTT
CAGATGAGATGTCAACAGATCTGGCTGAGTATATCTCGCAAGTTTCAGAAATATCTGTCA
AAGAAAGGGGATACTTTGCTATTGCCCTTTCTGGAGGTCCCCTAGTCAGTTTTTTGGGGA
AACTTTGTGAAGCGCCATACAACAAGACCTTGGATTGGTCTAAATGGTACATCTTCTGGT
CTGATGAGCGTGCTGTAGCAAAGAATCATGCAGAGAGTAATTATAGGATAACAAAAGAAG
GATTCCTGTCCAAGGTACCTATTCTCAATGGCCATGTCTACTCTATAAACGACAACGCGA
CGGTGGAGGATGCCGCAACAGATTACGAATTTGTCATCAGGCAGCTGGTCAAGGTCCGCA
CTATTTGGAGTCTCCGAAAGCAACGATTGCCCCAAGTTCGATCTAATCCTGCTCAGCATG
GGGTTCTGATGGACA

consensusID : consensus_14627#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 187
fasta sequence

                              [GGAGGTCTTTAGTTCAGGGAGACCCTGTGAGTGTGTTTTGGTCTTTTTGACAAATTGGAGATGGTTTTAGAGCGAAGAGGATTGAGACGTCAGAACTGAGAACACCAAATTTGATTAGGGTGGTATGATATTATGTGCTACATTATATTTAGTTCAATCAAAATTAGTTCAAGCAAGTCAAAAAAAA]

[+] EMBL BI809610             [GGAGGTCTTTAGTTCAGGGAGACCCTGTGAGTGTGTTTTGGTCTTTTTGACAAATTGGAGATGGTTTTAGAGCGAAGAGGATTGAGACGTCAGAACTGAGAACACCAAATTTGATTAGGGTGGTATGATATTATGTGCTACATTATATTTAGTTCAATCAAAATTAGTTCAAGCAAGTCAAAAAAAA]




>consensus_14627#3
GGAGGTCTTTAGTTCAGGGAGACCCTGTGAGTGTGTTTTGGTCTTTTTGACAAATTGGAG
ATGGTTTTAGAGCGAAGAGGATTGAGACGTCAGAACTGAGAACACCAAATTTGATTAGGG
TGGTATGATATTATGTGCTACATTATATTTAGTTCAATCAAAATTAGTTCAAGCAAGTCA
AAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14627#0      TATAGGTGAGTTAGCTTCCTTCCTGCATCTCTTGGCTTCTTCTTCTTCTTCTTCTTTTAT 60
consensus_14627#3      ------------------------------------------------------------
consensus_14627#2      ------------------------------------------------------------
consensus_14627#1      ------------------------------------------------------------
                                                                                   

consensus_14627#0      ACCCTTCTCTTGTTCGCTTGCGGCTCGGAGAAGAGGAGGAGAGGAGGGGGGCAAGGCAAG 120
consensus_14627#3      ------------------------------------------------------------
consensus_14627#2      ------------------------------------------------------------
consensus_14627#1      ------------------------------------------------------------
                                                                                   

consensus_14627#0      CAAATGCTCGGCGCCGCTCCGGCGTATTTTGGTGGAATAGTAACTTAATATAGAGTTCTG 180
consensus_14627#3      ------------------------------------------------------------
consensus_14627#2      ------------------------------------------------------------
consensus_14627#1      ------------------------------------------------------------
                                                                                   

consensus_14627#0      GGACAGAAAATTATGGAGAGGGAAATTTCTGCCTTATATGAACCAAAAAGAAACAATGAA 240
consensus_14627#3      ------------------------------------------------------------
consensus_14627#2      ------------------------------------------------------------
consensus_14627#1      ------------------------------------------------------------
                                                                                   

consensus_14627#0      ATAAGAATTTTTGAGAGTTCAGATGAGATGTCAACAGATCTGGCTGAGTATATCTCGCAA 300
consensus_14627#3      ------------------------------------------------------------
consensus_14627#2      ------------------------------------------------------------
consensus_14627#1      ------------------------------------------------------------
                                                                                   

consensus_14627#0      GTTTCAGAAATATCTGTCAAAGAAAGGGGATACTTTGCTATTGCCCTTTCTGGAGGTCCC 360
consensus_14627#3      ------------------------------------------------------------
consensus_14627#2      ------------------------------------------------------------
consensus_14627#1      ------------------------------------------------------------
                                                                                   

consensus_14627#0      CTAGTCAGTTTTTTGGGGAAACTTTGTGAAGCGCCATACAACAAGACCTTGGATTGGTCT 420
consensus_14627#3      ------------------------------------------------------------
consensus_14627#2      ------------------------------------------------------------
consensus_14627#1      ------------------------------------------------------------
                                                                                   

consensus_14627#0      AAATGGTACATCTTCTGGTCTGATGAGCGTGCTGTAGCAAAGAATCATGCAGAGAGTAAT 480
consensus_14627#3      ------------------------------------------------------------
consensus_14627#2      ------------------------------------------------------------
consensus_14627#1      ------------------------------------------------------------
                                                                                   

consensus_14627#0      TATAGGATAACAAAAGAAGGATTCCTGTCCAAGGTACCTATTCTCAATGGCCATGTCTAC 540
consensus_14627#3      ------------------------------------------------------------
consensus_14627#2      ------------------------------------------------------------
consensus_14627#1      ------------------------------------------------------------
                                                                                   

consensus_14627#0      TCTATAAACGACAACGCGACGGTGGAGGATGCCGCAACAGATTACGAATTTGTCATCAGG 600
consensus_14627#3      ------------------------------------------------------------
consensus_14627#2      ------------------------------------------------------------
consensus_14627#1      ------------------------------------------------------------
                                                                                   

consensus_14627#0      CAGCTGGTCAAGGTCCGCACTATTGGAGTCTCCGAAAGCAACGATTGCCCCAAGTTCGAT 660
consensus_14627#3      ------------------------------------------------------------
consensus_14627#2      ------------------------------------------------------------
consensus_14627#1      ------------------------------------------------------------
                                                                                   

consensus_14627#0      CTAATCCTGCTCAGCATGGGTTCTGATGGACATGTGGCTTCATTGTTCCCCAACCATCCA 720
consensus_14627#3      ------------------------------------------------------------
consensus_14627#2      ------------------------------------------------------------
consensus_14627#1      ------------------------------------------------------------
                                                                                   

consensus_14627#0      TCCCTTGAGCTGAAAGATGACTGGATCACCTACATCACCGACTCTCCCCAGCCTCCACCT 780
consensus_14627#3      ------------------------------------------------------------
consensus_14627#2      ------------------------------------------------------------
consensus_14627#1      ------------------------------------------------------------
                                                                                   

consensus_14627#0      GAGCGGATCACCTTCACTCTCCCTGTGATAAACTCGGCTTCGAACATCGCAATAGTGACT 840
consensus_14627#3      ------------------------------------------------------------
consensus_14627#2      ------------------------------------------------------------
consensus_14627#1      ------------------------------------------------------------
                                                                                   

consensus_14627#0      ACCGGTGACGATAAATCGGAGGCTGTCCATTTGGCCATTTCTGACAATGCAGATGGTCCA 900
consensus_14627#3      ------------------------------------------------------------
consensus_14627#2      ------------------------------------------------------------
consensus_14627#1      -------------------CAGGATCACGTCTGGCTAATTTTGTCAGAGTAAAAGTTTAT 41
                                                                                   

consensus_14627#0      GAAGCCCCCTCATCGCTGCCAGCAAGAATGGTTCAGCCAACAGACGGCAAGCTGGTGTGG 960
consensus_14627#3      ------------------------------------------------------------
consensus_14627#2      -----------------------------------------------TGAAGGAGTAGAA 13
consensus_14627#1      CCAAATGGGTGTCCTTTAGTCACATGATTTACATAGCATGTTCTTCCATTGCTCTATATT 101
                                                                                   

consensus_14627#0      TTTTTGGACAAGTCAGCTGCGTCCTCTCTGGATGCCGAGAACGATGACGCCTTTGAGCAG 1020
consensus_14627#3      ------------------------------------------------------------
consensus_14627#2      AGGCCTCTTCTTCTTCTTCTTCTTTTATACCCTTCTCTTGTTCGCTTGCGGCTCGGAGAA 73
consensus_14627#1      AATGGGACACTTAATCCAAGCAGTTCAGGAAATTTCTGGGTATCCAGCTAGTTTTCAGAA 161
                                                                                   

consensus_14627#0      CATCGCGAGTACTAACTCCAATCGTCGAAAGAACATTCCTTTTGCTGTGGATGAAGGTGT 1080
consensus_14627#3      ------------------------------------------------------------
consensus_14627#2      GAGGAGGAGAGGAGGGGGGCAAGGCAAGCAAATGCTCGGCGCCGCTCCGGCGTATTTTGG 133
consensus_14627#1      GGATGGTGACATTTAGTGGCATCTAAAAGCTCTATTTAAGTTGGCACATTCCCTATTCTT 221
                                                                                   

consensus_14627#0      GTGCGTGTGTAAGTAGGCGGTTTGGTATGATCGAATTCAGGATGTTTTGCCTTCCAGTTT 1140
consensus_14627#3      ------------------------------------------------------------
consensus_14627#2      TGGAATAGTAACTTAATATAGAGTCCTGGGACAGAAAATTATGGAGAGGGAAATTTCTGC 193
consensus_14627#1      GCTAGTGTTAATGTTGCATGAGATTATTGCAAGCATTTGTTTTTGTGCACAGGCTTGGGC 281
                                                                                   

consensus_14627#0      AGCAGAATGCTTGTTGCATTAGTTTTTT-TGTGGAGGGTTTT---GTTCAGG-----GAG 1191
consensus_14627#3      --------------------------------GGAGGTCTTTA--GTTCAGG-----GAG 21
consensus_14627#2      CTTATATGAACCAAAAAGAAACAATGAA-ATAAGAATTTTTGAGAGTTCAGAT----GAG 248
consensus_14627#1      CTTTGGTTATAGAATAGGTTTTATTGTATGCCTGTGCCATTGCCATTTCATACTACACAA 341
                                                        *     **     ****        * 

consensus_14627#0      AG-CCT-TG---AGTGTGTTTTGGTCGTTTTGG-----CAAATT--GGAGATGGTTTTAG 1239
consensus_14627#3      AC-CCTGTG---AGTGTGTTTTGGTCTTTTTGA-----CAAATT--GGAGATGGTTTTAG 70
consensus_14627#2      ATGTCAACA---GATCTGGCTGAGTATATCTCG-----CAAGTTTCAGAAATATCTGTCA 300
consensus_14627#1      ATTCCCATGTCTGGTTTATCCTGCACTATATAAGCAAATAAAATGTGGCAATTGTTTGTC 401
                       *   *         * *           * *        **  *   *  **   *    

consensus_14627#0      AGCGAAGAGGAT----TGAGAC--GTCAGAACTGAGAACACCCAAATTTG--ATTAGGGG 1291
consensus_14627#3      AGCGAAGAGGAT----TGAGAC--GTCAGAACTGAGAACACC-AAATTTG--ATTAGGG- 120
consensus_14627#2      AAGAAAGGGGATACTTTGCTATT-GCCCTTTCTGGAGGTCCCCTAGTCAG--TTTTTTGG 357
consensus_14627#1      GGTTTCAGTTATAAGGTGATCCATGATGATGTAGAAAGAATCGTGTGTTGCCACTGTAAA 461
                                 **    **      *        *       *       *    *     

consensus_14627#0      TGGTATGATATTATGTGCTACATTATA----TTTAGTTCAATCAAAGTTAGTTCAAG--C 1345
consensus_14627#3      TGGTATGATATTATGTGCTACATTATA----TTTAGTTCAATCAAAATTAGTTCAAG--C 174
consensus_14627#2      GGAAACTTTGTGAAGCGCCATACAACAAGACCTTGGATTGGTCTAAAT-GGTACATCTTC 416
consensus_14627#1      TTGAATAAGAATCCGCGGGGGCCTCCCCTGCTGTATCTTGATAAAAAAAAACATCACTGT 521
                           *         * *                *   *   *  **              

consensus_14627#0      AAAAGG-TGGAAGAAGCAGAGGCTTTCTGTTAATTTTGTTTCCTTGTGATGTTGCCGGTT 1404
consensus_14627#3      AAGTCA-AAAAAAA---------------------------------------------- 187
consensus_14627#2      TGGTCT-GATGAGCGTGCTGTAGCAAAGAATCATGCAGAGAGTAATTATAGGATAACAAA 475
consensus_14627#1      AAATTATGGTTTAGATAACTTATTCACTTACTATTTATGCTAAGATAATGATCTGTTGCA 581
                                                                                   

consensus_14627#0      CGAGTATAGAAAAATATGATCACAAACTTGATATTTTTAACAAAATCGTCGGGCAATCAT 1464
consensus_14627#3      ------------------------------------------------------------
consensus_14627#2      AGAAGGATTCCTGTCCAAGGTACCTATTCTCAATGGCCATGTCTACTCTATAAACGACAA 535
consensus_14627#1      TTTACATGGTTTCTTCTAGGTACCTATTCTCAATGGCCATGTCTACTCTATAAACGACAA 641
                                                                                   

consensus_14627#0      TTGCTTGATTGCTAAAAAAAAAAAAA---------------------------------- 1490
consensus_14627#3      ------------------------------------------------------------
consensus_14627#2      CGCGACGGTGGAGGATGCCGCAACAGATTACGAATTTGTCATCAGGCAGCTGGTCAAGGT 595
consensus_14627#1      CGCGACGGTGGAGGATGCCGCAACAGATTACGAATTTGTCATCAGGCAGCTGGTCAAGGT 701
                                                                                   

consensus_14627#0      ------------------------------------------------------------
consensus_14627#3      ------------------------------------------------------------
consensus_14627#2      CCGCACTATTTGGAGTCTCCGAAAGCAACGATTGCCCCAAGTTCGATCTAATCCTGCTCA 655
consensus_14627#1      CCGCACTATT-GGAGTCTCCGAAAGCAACGATTGCCCCAAGTTCGATCTAATCCTGCTCA 760
                                                                                   

consensus_14627#0      ----------------------------------------
consensus_14627#3      ----------------------------------------
consensus_14627#2      GCATGGGGTTCTGATGGACA-------------------- 675
consensus_14627#1      GCATGGG-TTCTGATGGACATGTGGCTTCATTGTTCCCCA 799