These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14630#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 2979 fasta sequence [ACTCGACTCGAGTCGAGAGAGACTCGTCGTCATTAGCCATCACTACTAGATCCGCCATTTCTCTCTCCCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTTCCGTCCGCCCCCAACCTCCCCCACCCAATTCGATCGCCTCCCCCACCCAGATCTCGCCGCCCGCCCGCCCGCCCGCCATGCCGTCGGCGACCGACCCCCCGGCGGCGCTCCCGCTAACCCTCGACCTCGACGACTTCAAGGGGGACTTCTCGTTCGACGCGCTGTTCGGGACCCTGGTGGACGAGCTGCTGCCGGAGTTCCGCGGGGACGACGCGCCCGGGGCGCCCCCGCCCCCGCCGCCCGTGCTCGGGGCCGCGCCCCCCGTCTTCCCCGCCGTCGACGAGCTTCTGGGGCTCTTCAAGCACTCATGCAAGGAGCTCGTCGATCTCCGCCGCCAGATTGACAAGAGGCTCCAGAATCTCAAGAAGGAGGTGGCCACGCAGGACGCCAAGCATCGCAAGACGCTCGGGGAGCTTGAGAAAGGTGTGGATGGTTTATTTGATAGCTTTGCTAGGTTGGATTCCCGTATTTCTAGTGTTGGCCAAACAGCTGCCAAAATTGGTGATCATTTACAGAGTGCAGAATCCCAGAGGGAAACTGCTAGTCAGACAATAGATCTCATCAAGTATCTGATGGAGTTCAACAGCACACCAGGGGATCTTATGGAACTTTCTCCTTTATTTTCTGATGACAGTCGTGTTGCTGAGGCAGCTTCAATTGCACAGAAATTGCGTTCATTTGCCGAGGAGGATGTTGGTAGACATGGTGTACCATCAGCTGTTGGTTCTGCTAATGCAAGTCGTGGTTTGGAGGTTGCTGTTGCAAATCTTCAAGAGTATTGTAATGAATTGGAGAATAGATTGTTAGCTCGGTTTGATACTGCATCACAGAGGCGGGAGATGTCTACGATGGCAGAATGTGCTAAAATTTTGTCACAGTTCAACCGCGGAACCAGTGCTATGCAACATTATGTTGCAACACGGCCAATGTTTATTGATGTGGATATTATGAGCATTGATATTCAAGTTGTTCTTGGTGAGGAGGGGCCACAAGCTGACCACATTTGTATTGCAGAGGGCCTCTCTGTATTGTACAAGGAAATTGCAGATACTGTGAGGAGAGAAGCAACTACAATAATGGCTGTATTTCCTTCTCCAAATGAGGTCATGTCAATTCTTGTGCAGAGAGTTTTAGAACAAAGGGTAACAGCAATTCTTGATAAACTTCTTATTAAGCCCTCTCTTGCTAACTTACCTCCTATAGAAGAGGGTGGTCTTCTGCATTATCTCAGAGTTCTGGCGGTAGCATATGACAAGACAAAAGAACTTGCTAAAGAGTTGCAATCTATCAGTTGTGGGGATTTGGACATTGAAGGTCTCACTGAATCCATATTTGTTTCCCACAAAGATGAGTACACAGAATTTGAACAGGCATCACTCAGACAACAATACCAATCAAAGATGGCTGAATTGAGAGCTGAGGCCAAGCAGCAATCTGAGTCAACTGGCACAATTGGACGTTCAAATGGAGCGGCTGTGACTACATCACTTCAGCAGCAGATATCAGTTACTGTAGTGACTGAATTTGTTCGCTGGAATGAGGAAGCAATATCTAGATGCACACTGTTGTTTTCTCAGCCTGCTACTGTTGCAGCTAATGTGAGATCCATATTTGCATGCTTGCTTGATCAAGTAAGCCAATATTTGACTGAAGGGCTTGACCATGCTAGAGAGAGTTTAAATCATGCAGCAACTCAACGGGATAGATATGTCATTGGAACAAGTGTTAGTAGAAGGGTTGCTACTGCTGCTGCTAATGCTGCAGAGGCGGCAGCTGCTGCAGGTGAGAGTAGCTTTAGATCCTTCATGA-TTGCTGTGC-AGCGTTGTGCTAGCAGTGTGGCTATTCTTCAGCAGTACTTCTCAAATACTATATCTCGGCTCCTGCT-GCCTGTGGATGGTGCCCACCCCTCAGCTTGTGAAGATATGGGATCAGCAGTATCTGTTGTTGAGGCTGCTGCCCACAAAGGACTGCTACAGTGTATTGATACCGTCATGTCTGAGGTTGAAAGATTGCTGTCTTCAGAACAGAAGGCTACAGATTATCGAACACCAGATGATGGAGCTGCACCGGATCATCGACCAACCAATGCTTGCATAAGAATTGTAGCCTATCTATCTCGTGTTCTCGAGGTTGCATT-CAGTGCTCTAGAAGGTCTCAATAAACAGTCCTTTTTGACTGAGCTGGGAAAT-CGCTTGCATAAGGGGCTACTCAAT-CATTGGCAGAAGTTCACATTTAGTCCCAGTGGTGGGTTACGGCTGAAACGTGATATCACTGAGTACGGGGAATTCGTTCGTAGCTTCAATGCCCCATCGATAGATGAAAAGTTTGAACTGCTTGGAATCATGGCCAATGTATTCATCGTTGCTCCTGAAAGTCTAGCTTCCTTATTTGAAGGAACCCCCAGTAT-CCGGAAAGATGCCTTGCGGTTCATTCAACT-CAGGGACGACTATAAGACAGCAAAAATCGCTTCCATGCTAAACAGTATCATGGCTGAATAGTGTCACGTCAAGAAGCAGTATGTTTGAGCCGCATTCACACTTTCTGCTGCCTATCAAACTTCAAGTCTATGAAATGATTCAGTGCCCTCCAAATGATTTTGACCATC-CATGTCGCC-TGTATAGCACAG-ATTCATGAT-TATGTTAATTCTTTGGGTTTTCTTTGTTCCATTTTTTTTCCCTATCCTATTTTGGGCTTGCATTTGTACATGCTGTATCAGTCTCTCTAAATATGACCATTGTACCAAGTGGCATAAGTAGTATTTAACGTTCAGTTGTTCATGATTGTATCAAACGCGACGACGCAGTTGGTAGGGTTGGTCAGTCTCTGTGCCGTACCATTCAACGATTCAAGTGTGGTTGATGCAATTCAAAAAAAA] [+] EMBL AK064983 [ACTCGACTCGAGTCGAGAGAGACTCGTCGTCATTAGCCATCACTACTAGATCCGCCATTTCTCTCTCCCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTTCCGTCCGCCCCCAACCTCCCCCACCCAATTCGATCGCCTCCCCCACCCAGATCTCGCCGCCCGCCCGCCCGCCCGCCATGCCGTCGGCGACCGACCCCCCGGCGGCGCTCCCGCTAACCCTCGACCTCGACGACTTCAAGGGGGACTTCTCGTTCGACGCGCTGTTCGGGACCCTGGTGGACGAGCTGCTGCCGGAGTTCCGCGGGGACGACGCGCCCGGGGCGCCCCCGCCCCCGCCGCCCGTGCTCGGGGCCGCGCCCCCCGTCTTCCCCGCCGTCGACGAGCTTCTGGGGCTCTTCAAGCACTCATGCAAGGAGCTCGTCGATCTCCGCCGCCAGATTGACAAGAGGCTCCAGAATCTCAAGAAGGAGGTGGCCACGCAGGACGCCAAGCATCGCAAGACGCTCGGGGAGCTTGAGAAAGGTGTGGATGGTTTATTTGATAGCTTTGCTAGGTTGGATTCCCGTATTTCTAGTGTTGGCCAAACAGCTGCCAAAATTGGTGATCATTTACAGAGTGCAGAATCCCAGAGGGAAACTGCTAGTCAGACAATAGATCTCATCAAGTATCTGATGGAGTTCAACAGCACACCAGGGGATCTTATGGAACTTTCTCCTTTATTTTCTGATGACAGTCGTGTTGCTGAGGCAGCTTCAATTGCACAGAAATTGCGTTCATTTGCCGAGGAGGATGTTGGTAGACATGGTGTACCATCAGCTGTTGGTTCTGCTAATGCAAGTCGTGGTTTGGAGGTTGCTGTTGCAAATCTTCAAGAGTATTGTAATGAATTGGAGAATAGATTGTTAGCTCGGTTTGATACTGCATCACAGAGGCGGGAGATGTCTACGATGGCAGAATGTGCTAAAATTTTGTCACAGTTCAACCGCGGAACCAGTGCTATGCAACATTATGTTGCAACACGGCCAATGTTTATTGATGTGGATATTATGAGCATTGATATTCAAGTTGTTCTTGGTGAGGAGGGGCCACAAGCTGACCACATTTGTATTGCAGAGGGCCTCTCTGTATTGTACAAGGAAATTGCAGATACTGTGAGGAGAGAAGCAACTACAATAATGGCTGTATTTCCTTCTCCAAATGAGGTCATGTCAATTCTTGTGCAGAGAGTTTTAGAACAAAGGGTAACAGCAATTCTTGATAAACTTCTTATTAAGCCCTCTCTTGCTAACTTACCTCCTATAGAAGAGGGTGGTCTTCTGCATTATCTCAGAGTTCTGGCGGTAGCATATGACAAGACAAAAGAACTTGCTAAAGAGTTGCAATCTATCAGTTGTGGGGATTTGGACATTGAAGGTCTCACTGAATCCATATTTGTTTCCCACAAAGATGAGTACACAGAATTTGAACAGGCATCACTCAGACAACAATACCAATCAAAGATGGCTGAATTGAGAGCTGAGGCCAAGCAGCAATCTGAGTCAACTGGCACAATTGGACGTTCAAATGGAGCGGCTGTGACTACATCACTTCAGCAGCAGATATCAGTTACTGTAGTGACTGAATTTGTTCGCTGGAATGAGGAAGCAATATCTAGATGCACACTGTTGTTTTCTCAGCCTGCTACTGTTGCAGCTAATGTGAGATCCATATTTGCATGCTTGCTTGATCAAGTAAGCCAATATTTGACTGAAGGGCTTGACCATGCTAGAGAGAGTTTAAATCATGCAGCAACTCAACGGGATAGATATGTCATTGGAACAAGTGTTAGTAGAAGGGTTGCTACTGCTGCTGCTAATGCTGCAGAGGCGGCAGCTGCTGCAGGTGAGAGTAGCTTTAGATCCTTCATGA TTGCTGTGC AGCGTTGTGCTAGCAGTGTGGCTATTCTTCAGCAGTACTTCTCAAATACTATATCTCGGCTCCTGCT GCCTGTGGATGGTGCCCACCCCTCAGCTTGTGAAGATATGGGATCAGCAGTATCTGTTGTTGAGGCTGCTGCCCACAAAGGACTGCTACAGTGTATTGATACCGTCATGTCTGAGGTTGAAAGATTGCTGTCTTCAGAACAGAAGGCTACAGATTATCGAACACCAGATGATGGAGCTGCACCGGATCATCGACCAACCAATGCTTGCATAAGAATTGTAGCCTATCTATCTCGTGTTCTCGAGGTTGCATT CAGTGCTCTAGAAGGTCTCAATAAACAGTCCTTTTTGACTGAGCTGGGAAAT CGCTTGCATAAGGGGCTACTCAAT CATTGGCAGAAGTTCACATTTAGTCCCAGTGGTGGGTTACGGCTGAAACGTGATATCACTGAGTACGGGGAATTCGTTCGTAGCTTCAATGCCCCATCGATAGATGAAAAGTTTGAACTGCTTGGAATCATGGCCAATGTATTCATCGTTGCTCCTGAAAGTCTAGCTTCCTTATTTGAAGGAACCCCCAGTAT CCGGAAAGATGCCTTGCGGTTCATTCAACT CAGGGACGACTATAAGACAGCAAAAATCGCTTCCATGCTAAACAGTATCATGGCTGAATAGTGTCACGTCAAGAAGCAGTATGTTTGAGCCGCATTCACACTTTCTGCTGCCTATCAAACTTCAAGTCTATGAAATGATTCAGTGCCCTCCAAATGATTTTGACCATC CATGTCGCC TGTATAGCACAG ATTCATGAT TATGTTAATTCTTTGGGTTTTCTTTGTTCCATTTTTTTTCCCTATCCTATTTTGGGCTTGCATTTGTACATGCTGTATCAGTCTCTCTAAATATGACCATTGTACCAAGTGGCATAAGTAGTA ] [+] EMBL AU173861 [ CGTCCGCCCCCAACCTCCCCCACCCAATTCGATCGCCTCCCCCACCCAGATCTCGCCGCCCGCCCGCCCGCCCGCCATGCCGTCGGCGACCGACCCCCCGGCGGCGCTCCCGCTAACCCTCGACCTCGACGACTTCAAGGGGGACTTCTCGTTCGACGCGCTGTTCGGGACCCTGGTGGACGAGCTGCTGCCGGAGTTCCGCGGGGACGACGCGCCCGGGGCGCCCCCGCCCCCGCCGCCCGTGCTCGGGGCCGCGCCCCCCGTCTTCCCCGCCGTCGACGAGCTTCTGGGGCTCTTCAAGCACTCATGCAAGGAGCTCGTCGATCTCCGCCGCCAGATTGACAAGAGGCTCCAGAATCTCAAGAAGGAGGTGGCCACGCAGGACGCCAAGCATCGCAAGACGCTCGGGGAGCTTGAGAAAGGTGTGGATGGTTT ] [+] EMBL CF306617 [ CCAGATTGACAAGAGGCTCCAGAATCTCAAGAAGGAGGTGGCCACGCAGGACGCCAAGCATCGCAAGACGCTCGGGGAGCTTGAGAAAGGTGTGGATGGTTTATTTGATAGCTTTGCTAGGTTGGATTCCCGTATTTCTAGTGTTGGCCAAACAGCTGCCAAAATTGGTGATCATTTACAGAGTGCAGAATCCCAGAGGGAAACTGCTAGTCAGACAATAGATCTCATCAAGTATCTGATGGAGTTCAACAGCACACCAGGGGATCTTATGGAACTTTCTCCTTTATTTTCTGATGACAGTCGTGTTGCTGAGGCAGCTTCAATTGCACAGAAATTGCGTTCATTTGCCGAGGAGGATGTTGGTAGACATGGTGTACCATCAGCTGTTGGTTCTGCTAATGCAAGTCGTGGTTTGGAGGTTGCTGTTGCAAATCTTCAAGAGTATTGTAATGAATTGGAGAATAGATTGTTAGCTCGGTTTGATACTGCATCACAGAGGCGGGAGATGTCTACGATGGCAGAATGTGCTAAAATTTTGTCACAGTTCAACCGCGGAACCAGTGCTATGCAACATTATG ] [+] EMBL CB666019 [ AGGGAAACTGCTAGTCAGACAATAGATCTCATCAAGTATCTGATGGAGTTCAACAGCACACCAGGGGATCTTATGGAACTTTCTCCTTTATTTTCTGATGACAGTCGTGTTGCTGAGGCAGCTTCAATTGCACAGAAATTGCGTTCATTTGCCGAGGAGGATGTTGGTAGACATGGTGTACCATCAGCTGTTGGTTCTGCTAATGCAAGTCGAGGTTTGGAGGGTGCTGTTGCAAATCTTCAAGAGTATTGTAATGAATTGGAGAATAGATTGTTAGGTCGGTTTGATACTGCATCACACAGGCGGGAGATGTCTACGATGGCAGAATGTGCTAAAATTTTGTCACAGTTCAACCGCGGAACCAGTGCTATGCAACATTATGTTGCAACACGGCCAATGTTTATTGATGTGGATATTATGAGCATTGATATTCAAGTTGTTCTTGGTGAGGAGGGGCCACAAGCTGACCACATTTGTATTGCAGAGGGCCTCTCTGTATTGTACAAGGAAATTGCAGATACTGTGAGGAGAGAAGCAACTACAATAATGGCTGTATTTCCTTCTCCAGATGAGGTCATGTCAATTCTTGTGCAGAGAGTTTTAGAACAAAGGGTAACAGCAATTCTTGATAAACTTCTTATTAAGCCCTCTCTTGCTAACTTACCTCCTATAGAAGAGGGTGGTCTTCT ] [+] EMBL CB637387 [ GCTGTTGGTTCTGCTAATGCAAGTCGTGGTTTGGAGGTTGCTGTTGCAAATCTTCAAGAGTATTGTAATGAATTGGAGAATAGATTGTTAGCTCGGTTTGATACTGCATCACAGAGGCGGGAGATGTCTACGATGGCAGAATGTGCTAAAATTTTGTCACAGTTCAACCGCGGAACCAGTGCTATGCAACATTATGTTGCAACACGGCCAATGTTTATTGATGTGGATATTATGAGCATTGATATTCAAGTTGTTCTTGGTGAGGAGGGGCCACAAGCTGACCACATTTGTATTGCAGAGGGCCTCTCTGTATTGTACAAGGAAATTGCAGATACTGTGAGGAGAGAAGCAACTACAATAATGGCTGTATTTCCTTCTCCAAATGAGGTCATGTCAATTCTTGTGCAGAGAGTTTTAGAACAAAGGGTAACAGCAATTCTTGATAAACTTCTTATTAAGCCCTCTCTTGCTAACTTACCTCCTATAGAAGAGGGTGGTCTTCTGCATTATCTCAGAGTTCTGGCGGTAGCATATGACAAGACAAAAGAACTTGCTAAAGAGTTGCAATCTATCAGTT ] [+] EMBL AK062178 [ TGACAAGACAAAAGAACTTGCTAAAGAGTTGCAATCTATCAGTTGTGGGGATTTGGACATTGAAGGTCTCACTGAATCCATATTTGTTTCCCACAAAGATGAGTACACAGAATTTGAACAGGCATCACTCAGACAACAATACCAATCAAAGATGGCTGAATTGAGAGCTGAGGCCAAGCAGCAATCTGAGTCAACTGGCACAATTGGACGTTCAAATGGAGCGGCTGTGACTACATCACTTCAGCAGCAGATATCAGTTACTGTAGTGACTGAATTTGTTCGCTGGAATGAGGAAGCAATATCTAGATGCACACTGTTGTTTTCTCAGCCTGCTACTGTTGCAGCTAATGTGAGATCCATATTTGCATGCTTGCTTGATCAAGTAAGCCAATATTTGACTGAAGGGCTTGGCCATGCTAGAGAGAGTTTAAATCATGCAGCAACTCAACGGGATAGATATGTCATTGGAACAAGTGTTAGTAGAAGGGTTGCTACTGCTGCTGCTAATGCTGCAGAGGCGGCAGCTGCTGCAGGTGAGAGTAGCTTTAGATCCTTCATGA TTGCTGTGC AGCGTTGTGCTAGCAGTGTGGCTATTCTTCAGCAGTACTTCTCAAATACTATATCTCGGCTCCTGCT GCCTGTGGATGGTGCCCACCCCTCAGCTTGTGAAGATATGGGATCAGCAGTATCTGTTGTTGAGGCTGCTGCCCACAAAGGACTGCTACAGTGTATTGATACCGTCATGTCTGAGGTTGAAAGATTGCTGTCTTCAGAACAGAAGGCTACAGATTATCGAACACCAGATGATGGAGCTGCACCGGATCATCGACCAACCAATGCTTGCATAAGAATTGTAGCCTATCTATCTCGTGTTCTCGAGGTTGCATT CAGTGCTCTAGAAGGTCTCAATAAACAGTCCTTTTTGACTGAGCTGGGAAAT CGCTTGCATAAGGGGCTACTCAAT CATTGGCAGAAGTTCACATTTAGTCCCAGTGGTGGGTTACGGCTGAAACGTGATATCACTGAGTACGGGGAATTCGTTCGTAGCTTCAATGCCCCATCGATAGATGAAAAGTTTGAACTGCTTGGAATCATGGCCAATGTATTCATCGTTGCTCCTGAAAGTCTAGCTTCCTTATTTGAAGGAACCCCCAGTAT CCGGAAAGATGCCTTGCGGTTCATTCAACT CAGGGACGACTATAAGACAGCAAAAATCGCTTCCATGCTAAACAGTATCATGGCTGAATAGTGTCACGTCAAGAAGCAGTATGTTTGAGCCGCATTCACACTTTCTGCTGCCTATCAAACTTCAAGTCTATGAAATGATTCAGTGCCCTCCAAATGATTTTGACCATC CATGTCGCC TGTATAGCACAG ATTCATGAT TATGTTAATTCTTTGGGTTTTCTTTGTTCCATTTTTTTTCCCTATCCTATTTTGGGCTTGCATTTGTACATGCTGTATCAGTCTCTCTAAATATGACCATTGTACCAAGTGGCATAAGTAGTATTTAACG ] [-] EMBL CB666020 [ GTGGGGATTTGGACATTGAAGGTCTCACTGAATCCATATTTGTTTCCCACAAAGATGAGTACACAGAATTTGAACAGGCATCACTCAGACAACAATACCAATCAAAGATGGCTGAATTGAGAGCTGAGGCCAAGCAGCAATCTGAGTCAACTGGCACAATTGGACGTTCAAATGGAGCGGCTGTGACTACATCACTTCAGCAGCAGATATCAGTTACTGTAGTGACTGAATTTGTTCGCTGGAATGAGGAAGCAATATCTAGATGCACACTGTTGTTTTCTCAGCCTGCTACTGTTGCAGCTAATGTGAGATCCATATTTGCATGCTTGCTTGATCAAGTAAGCCAATATTTGACTGAAGGGCTTGACCATGCTAGAGAGAGTTTAAATCATGCAGCAACTCAACGGGATAGATATGTCATTGGAACAAGTGTTAGTAGAAGGGTTGCTACTGCTGCTGCTAATGCTGCAGAGGCGGCAGCTGCTGCAGGTGAGAGTAGCTTTAGATCCTTCATGA TTGCTGTGC AGCGTTGTGCTAGCAGTGTGGCTATTCTTCAGCAGTACTTCTCAAATAATATATCTCGGCTCCTGCT GCCTGTGGATGGTGCCCACCCCTCAGCTTGTGAAGATATGGGATCAGCAGTATCTGTTGTTGAGGCTGCTGCCCACAAAGGACTGATACAGTGTATTGATACCGTCATGTCTGAGGTTGAAAGATTGCTGTCTTCAGAACAGAAGGCTACAGATTATCGAACACCAGATGATGGAGCTGCACCGGATCATCGACCAACCAATGCTTGCATAAGAATTGTAGCCTATCTAT ] [+] EMBL CF336916 [ AAGCCAATATTTGACTGAAGGGCTTGACCATGCTAGAGAGAGTTTAAATCATGCAGCAACTCAACGGGATAGATATGTCATTGGAACAAGTGTTAGTAGAAGGGTTGCTACTGCTGCTGCTAATGCTGCAGAGGCGGCAGCTGCTGCAGGTGAGAGTAGCTTTAGATCCTTCATGA TTGCTGTGC AGCGTTGTGCTAGCAGTGTGGCTATTCTTCAGCAGTACTTCTCAAATACTATATCTCGGCTCCTGCT GCCTGTGGATGGTGCCCACCCCTCAGCTTGTGAAGATATGGGATCAGCAGTATCTGTTGTTGAGGCTGCTGCCCACAAAGGACTGCTACAGTGTATTGATACCGTCATGTCTGAGGTGGAAAGATTGCTGTCTTCAGAACAGAAGGCTACAGATTATCGAACACCAGATGATGGAGCTGCACCGGATCATCGACCGACCAATGCTTGCATAAGAATTGTAGCCTATCTATCTCGTGTTCTCGAc ] [+] EMBL CF336920 [ AAGCCAATATTTGACTGAAGGGCTTGACCATGCTAGAGAGAGTTTAAATCATGCAGCAACTCAACGGGATAGATATGTCATTGGAACAAGTG TAGTAGAAGGGTTGCTACTGCTGCTGCTAATGCTGCAGAGGCGGCAGCTGCTGCAGGTGAGAGTAGCTTTAGATCCTTCATGANTTGCTGTGCNAGCGTTGTGCTAGCAGTGTGGCTATTCTTCAGCAGTACTTCTCAAATACTATATCTCGGCTCCTGCTNGCCTGTGGATGGTGCCCACCCCTCAGCTTGTGAAGATATGGGATCAGCAGTATCTGTTGTTGAGGCTGCTGCCCACAAAGGACTGCTACAGTGTATTGATACCGTCATGTCTGAGGTGGAAAGATTGCTGTCTTCAGAACAGAAGGCTACAGATTATCGAACACCAGATGATGGAGCTGCACCGGATCATCGACCGACCAATGCTTGCATAAGAATTGTAGCCTATCTATCTCGTGTTCTCGACGTTG ] [+] EMBL AU055807 [ TCTCGTGTTCTCGAGNTTGCATTCCAGTGCTCTAGAAGGTCTCAATAACCAG CCTTTTTGACTGAGCTGGNAAATCCGCTTGCATAAGGGGCTACTCAATCCATTGGCAGAAGTTCACATTTAGTCCCAGTGGTGGGTTACGGCTGAAACGTGATATCACTGAGTACGGGGAATTCGTTCGTAGCTTCAATGCCCCATCGATAGATGAAAAGTTTGAACTGCTTGGAATCATGGCCAATGTATTCATCGTTGCTCCTGAAAGTCTAGCTTCCTTATTTGAAGGAACCCCCAGTATCCCGGAAAGATGCCTTGCGGTTCATTCAACTCCAGGGACGACTATAAGACAGCAAAAATCGCTTCCATGCTAAACAGTATCATGGCTGAATAGTGTCACGTCAAGAAGCAGTATGTTTGAGCCGCATTCACACTTTCTGCTGCCTATCAAACTTCAAGTCTATGAAATGATTCAGTGCCCTCCAAATGATTTTGACCATC CATGTCGCC TGTATAGCACAG ATTCATGAT TATGTTAATTCTTTGGGTTTTCTTTGTTCCATTTTTTTTCCCTATCCTATTTTGGGCTTGCATTTGTACATGCTGTATCAGTCTCTCTAAATATGACCATTGTACCAAGTGGCATAAGTAGTATTTAACGTTCAGTTGTTCATGATTGTAAAAAA ] [-] EMBL CF317448 [ TAAACAGTCCTTTTTGACTGAGCTGGGAAAT CGCTTGCATAAGGGGCTACTCAAT CATTGGCAGAAGTTCACATTTAGTCCCAGTGGTAGGTTACGGCTGAAACGTGATATCACTGAGTACGGGGAATTCGTTCGTAGCTTCAATGCCCCATCGATAGATGAAAAGTTTGAACTGCTTGGAATCATGGCCAATGTATTCATCGTTGCTCCTGAAAGTCTAGCTTCCTTATTTGAAGGAACCCCCAGTAT CCGGAAAGATGCCTTGCGGTTCATTCAACT CAGGGGCGACTATAAGACAGCAAAAATCGCTTCCATGCTAAACAGTATCATGGCTGAATAGTGTCACGTCAAGAAGCAGTATGTTTGAGCCGCATTCACACTTTCTGCTGCCTATCAAACTTCAAGTCTATGAAATGATTCAGTGCCCTCCAAATGATTTTGACCATC CATGTCGCC TGTATAGCACAG ATTCATGAT TATGTTAATTCTTTGGGTTTTCTTTGTTCCAaaaaaaa ] [-] EMBL CF317452 [ TCCTTTTTGACTGAGCTGGGAAAT CGCTTGCATAAGGGGCTACTCAAT CATTGGCAGAAGTTCACATTTAGTCCCAGTGGTAGGTTACGGCTGAAACGTGATATCACTGAGTACGGGGAATTCGTTCGTAGCTTCAATGCCCCATCGATAGATGAAAAGTTTGAACTGCTTGGAATCATGGCCAATGTATTCATCGTTGCTCCTGAAAGTCTAGCTTCCTTATTTGAAGGAACCCCCAGTAT CCGGAAAGATGCCTTGCGGTTCATTCAACT CAGGGGCGACTATAAGACAGCAAAAATCGCTTCCATGCTAAACAGTATCATGGCTGAATAGTGTCACGTCAAGAAGCAGTATGTTTGAGCCGCATTCACACTTTCTGCTGCCTATCAAACTTCAAGTCTATGAAATGATTCAGTGCCCTCCAAATGATTTTGACCATCACATGTCGCCGTGTATAGCACAGAATTCATGATATATGTTAATTCTTTGGGTTTTCTTTGTTCCAaaaaaaa ] [+] EMBL CA999547 [ ATCACTGAGTACGGGGAATTCGTTCGTAGCTTCAATGCCCCATCGATAGATGAAAAGTTTGAACTGCTTGGAATCATGGCCAATGTATTCATCGTTGCTCCTGAAAGTCTAGCTTCCTTATTTGAAGGAACCCCCAGTAT CCGGAAAGATGCCTTGCGGTTCATTCAACT CAGGGACGACTATAAGACAGCAAAAATCGCTTCCATGCTAAACAGTATCATGGCTGAATAGTGTCACGTCAAGAAGCAGTATGTTTGAGCCGCATTCACACTTTCTGCTGCCTATCAAACTTCAAGTCTATGAAATGATTCAGTGCCCTCCAAATGATTTTGACCATC CATGTCGCC TGTATAGCACAG ATTCATGAT TATGTTAATTCTTTGGGTTTTCTTTGTTCCATTTTTTTTCCCTATCCTATTTTGGGCTTGCATTTGTACATGCTGTATCAGTCTCTCTAAATATGACCATTGTACCAAGTGGCATAAGTAGTATTTAACGTTCAGTTGTTCATGATTGTATC ] [+] EMBL CB000638 [ ATCACTGAGTACGGGGAATTCGTTCGTAGCTTCAATGCCCCATCGATAGATGAAAAGTTTGAACTGCTTGGAATCATGGCCAATGTATTCATCGTTGCTCCTGAAAGTCTAGCTTCCTTATTTGAAGGAACCCCCAGTAT CCGGAAAGATGCCTTGCGGTTCATTCAACT CAGGGACGACTATAAGACAGCAAAAATCGCTTCCATGCTAAACAGTATCATGGCTGAATAGTGTCACGTCAAGAAGCAGTATGTTTGAGCCGCATTCACACTTTCTGCTGCCTATCAAACTTCAAGTCTATGAAATGATTCAGTGCCCTCCAAATGATTTTGACCATC CATGTCGCC TGTATAGCACAG ATTCATGAT TATGTTAATTCTTTGGGTTTTCTTTGTTCCATTTTTTTTCCCTATCCTATTTTGGGCTTGCATTTGTACATGCTGTATCAGTCTCTCTAAATATGACCATTGTACCAAGTGGCATAAGTAGTATTTAACGTTCAGTTGTTCATGATTGTATCACGCGCGACGACGCAGTTGGTAGGGTTGGTCAGTCTCTGTGCCGTACCATTCAACGATTCAAGTGTGGTTGATGCAATTCAAAAAAAA] [-] EMBL CB637388 [ TTCGTAGCTTCAATGCCCCATCGATAGATGAAAAGTTTGAACTGCTTGGAATCATGGCCAATGTATTCATCGTTGCTCCTGAAAGTCTAGCTTCCTTATTTGAAGGAACCCCCAGTAT CCGGAAAGATGCCTTGCGGTTCATTCAACT CAGGGACGACTATAAGACAGCAAAAATCGCTTCCATGCTAAACAGTATCATGGCTGAATAGTGTCACGTCAAGAAGCAGTATGTTTGAGCCGCATTCACACTTTTTGCTGCCTATCAAACTTCAAGTCTATGAAATGATTCAGTGCCCTCCAAATGATTTTGACCATC CATGTCGCC TGTATAGCACAG ATTCATGAT TATGTTAATTCTTTGGGTTTTCTTTGTTCCATTTTTTTTCCCTATCCTATTTTGGGCTTGCATTTGTACATGCTGTATCAGTCTCTCTAAATATGACCATTGTACCAAGTGGCATAAGTAGTATTTAACGT ] [+] EMBL CA998744 [ GAGCCGCATTCACACTTTCTGCTGCCTATCAAACTTCAAGTCTATGAAATGATTCAGTGCCCTCCAAATGATTTTGACCATC CATGTCGCC TGTATAGCACAG ATTCATGAT TATGTTAATTCTTTGGGTTTTCTTTGTTCCATTTTTTTTCCCTATCCTATTTTGGGCTTGCATTTGTACATGCTGTATCAGTCTCTCTAAATATGACCATTGTACCAAGTGGCATAAGTAGTATTTAACGTTCAGTTGTTCATGATTG ] consensusID : consensus_14630#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 240 fasta sequence [TGGCGCGAAGCTACCGTGTGCCGGATTATGACTGAACGCCTCTAAGTCAGAATCCAAGCATCGCAAGACGCTCGGGGAGCTTGAGAAAGGTGTGGATGGTTTATTTGATAGCTTTGCTAGGTTGGATTCCCGTATTTCTAGTGTTGGCCAAACAGCTGCCAAAATTGGTGATTATTTACAGAGTGCAGAATCCCAGAGGGAAACTGCTAGTCAGACAATAGATCTCATCAAGTATCTGAT] [+] EMBL CF307211 [TGGCGCGAAGCTACCGTGTGCCGGATTATGACTGAACGCCTCTAAGTCAGAATCCAAGCATCGCAAGACGCTCGGGGAGCTTGAGAAAGGTGTGGATGGTTTATTTGATAGCTTTGCTAGGTTGGATTCCCGTATTTCTAGTGTTGGCCAAACAGCTGCCAAAATTGGTGATTATTTACAGAGTGCAGAATCCCAGAGGGAAACTGCTAGTCAGACAATAGATCTCATCAAGTATCTGAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14630#0 ACTCGACTCGAGTCGAGAGAGACTCGTCGTCATTAGCCATCACTACTAGATCCGCCATTT 60 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 CTCTCTCCCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTTCCGTCCGCCCCCAACC 120 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 TCCCCCACCCAATTCGATCGCCTCCCCCACCCAGATCTCGCCGCCCGCCCGCCCGCCCGC 180 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 CATGCCGTCGGCGACCGACCCCCCGGCGGCGCTCCCGCTAACCCTCGACCTCGACGACTT 240 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 CAAGGGGGACTTCTCGTTCGACGCGCTGTTCGGGACCCTGGTGGACGAGCTGCTGCCGGA 300 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 GTTCCGCGGGGACGACGCGCCCGGGGCGCCCCCGCCCCCGCCGCCCGTGCTCGGGGCCGC 360 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 GCCCCCCGTCTTCCCCGCCGTCGACGAGCTTCTGGGGCTCTTCAAGCACTCATGCAAGGA 420 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 GCTCGTCGATCTCCGCCGCCAGATTGACAAGAGGCTCCAGAATCTCAAGAAGGAGGTGGC 480 consensus_14630#1 -------------TGGCGCGAAGCTACCGTGTG---CCGGATTATGAC--TGAACGCCTC 42 * *** * * * * * ** ** * * * * * * * consensus_14630#0 CACGCAGGACGCCAAGCATCGCAAGACGCTCGGGGAGCTTGAGAAAGGTGTGGATGGTTT 540 consensus_14630#1 TAAGTCAGAATCCAAGCATCGCAAGACGCTCGGGGAGCTTGAGAAAGGTGTGGATGGTTT 102 * * ** ************************************************* consensus_14630#0 ATTTGATAGCTTTGCTAGGTTGGATTCCCGTATTTCTAGTGTTGGCCAAACAGCTGCCAA 600 consensus_14630#1 ATTTGATAGCTTTGCTAGGTTGGATTCCCGTATTTCTAGTGTTGGCCAAACAGCTGCCAA 162 ************************************************************ consensus_14630#0 AATTGGTGATCATTTACAGAGTGCAGAATCCCAGAGGGAAACTGCTAGTCAGACAATAGA 660 consensus_14630#1 AATTGGTGATTATTTACAGAGTGCAGAATCCCAGAGGGAAACTGCTAGTCAGACAATAGA 222 ********** ************************************************* consensus_14630#0 TCTCATCAAGTATCTGATGGAGTTCAACAGCACACCAGGGGATCTTATGGAACTTTCTCC 720 consensus_14630#1 TCTCATCAAGTATCTGAT------------------------------------------ 240 ****************** consensus_14630#0 TTTATTTTCTGATGACAGTCGTGTTGCTGAGGCAGCTTCAATTGCACAGAAATTGCGTTC 780 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 ATTTGCCGAGGAGGATGTTGGTAGACATGGTGTACCATCAGCTGTTGGTTCTGCTAATGC 840 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 AAGTCGTGGTTTGGAGGTTGCTGTTGCAAATCTTCAAGAGTATTGTAATGAATTGGAGAA 900 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 TAGATTGTTAGCTCGGTTTGATACTGCATCACAGAGGCGGGAGATGTCTACGATGGCAGA 960 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 ATGTGCTAAAATTTTGTCACAGTTCAACCGCGGAACCAGTGCTATGCAACATTATGTTGC 1020 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 AACACGGCCAATGTTTATTGATGTGGATATTATGAGCATTGATATTCAAGTTGTTCTTGG 1080 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 TGAGGAGGGGCCACAAGCTGACCACATTTGTATTGCAGAGGGCCTCTCTGTATTGTACAA 1140 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 GGAAATTGCAGATACTGTGAGGAGAGAAGCAACTACAATAATGGCTGTATTTCCTTCTCC 1200 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 AAATGAGGTCATGTCAATTCTTGTGCAGAGAGTTTTAGAACAAAGGGTAACAGCAATTCT 1260 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 TGATAAACTTCTTATTAAGCCCTCTCTTGCTAACTTACCTCCTATAGAAGAGGGTGGTCT 1320 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 TCTGCATTATCTCAGAGTTCTGGCGGTAGCATATGACAAGACAAAAGAACTTGCTAAAGA 1380 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 GTTGCAATCTATCAGTTGTGGGGATTTGGACATTGAAGGTCTCACTGAATCCATATTTGT 1440 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 TTCCCACAAAGATGAGTACACAGAATTTGAACAGGCATCACTCAGACAACAATACCAATC 1500 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 AAAGATGGCTGAATTGAGAGCTGAGGCCAAGCAGCAATCTGAGTCAACTGGCACAATTGG 1560 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 ACGTTCAAATGGAGCGGCTGTGACTACATCACTTCAGCAGCAGATATCAGTTACTGTAGT 1620 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 GACTGAATTTGTTCGCTGGAATGAGGAAGCAATATCTAGATGCACACTGTTGTTTTCTCA 1680 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 GCCTGCTACTGTTGCAGCTAATGTGAGATCCATATTTGCATGCTTGCTTGATCAAGTAAG 1740 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 CCAATATTTGACTGAAGGGCTTGACCATGCTAGAGAGAGTTTAAATCATGCAGCAACTCA 1800 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 ACGGGATAGATATGTCATTGGAACAAGTGTTAGTAGAAGGGTTGCTACTGCTGCTGCTAA 1860 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 TGCTGCAGAGGCGGCAGCTGCTGCAGGTGAGAGTAGCTTTAGATCCTTCATGATTGCTGT 1920 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 GCAGCGTTGTGCTAGCAGTGTGGCTATTCTTCAGCAGTACTTCTCAAATACTATATCTCG 1980 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 GCTCCTGCTGCCTGTGGATGGTGCCCACCCCTCAGCTTGTGAAGATATGGGATCAGCAGT 2040 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 ATCTGTTGTTGAGGCTGCTGCCCACAAAGGACTGCTACAGTGTATTGATACCGTCATGTC 2100 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 TGAGGTTGAAAGATTGCTGTCTTCAGAACAGAAGGCTACAGATTATCGAACACCAGATGA 2160 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 TGGAGCTGCACCGGATCATCGACCAACCAATGCTTGCATAAGAATTGTAGCCTATCTATC 2220 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 TCGTGTTCTCGAGGTTGCATTCAGTGCTCTAGAAGGTCTCAATAAACAGTCCTTTTTGAC 2280 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 TGAGCTGGGAAATCGCTTGCATAAGGGGCTACTCAATCATTGGCAGAAGTTCACATTTAG 2340 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 TCCCAGTGGTGGGTTACGGCTGAAACGTGATATCACTGAGTACGGGGAATTCGTTCGTAG 2400 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 CTTCAATGCCCCATCGATAGATGAAAAGTTTGAACTGCTTGGAATCATGGCCAATGTATT 2460 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 CATCGTTGCTCCTGAAAGTCTAGCTTCCTTATTTGAAGGAACCCCCAGTATCCGGAAAGA 2520 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 TGCCTTGCGGTTCATTCAACTCAGGGACGACTATAAGACAGCAAAAATCGCTTCCATGCT 2580 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 AAACAGTATCATGGCTGAATAGTGTCACGTCAAGAAGCAGTATGTTTGAGCCGCATTCAC 2640 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 ACTTTCTGCTGCCTATCAAACTTCAAGTCTATGAAATGATTCAGTGCCCTCCAAATGATT 2700 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 TTGACCATCCATGTCGCCTGTATAGCACAGATTCATGATTATGTTAATTCTTTGGGTTTT 2760 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 CTTTGTTCCATTTTTTTTCCCTATCCTATTTTGGGCTTGCATTTGTACATGCTGTATCAG 2820 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 TCTCTCTAAATATGACCATTGTACCAAGTGGCATAAGTAGTATTTAACGTTCAGTTGTTC 2880 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 ATGATTGTATCAAACGCGACGACGCAGTTGGTAGGGTTGGTCAGTCTCTGTGCCGTACCA 2940 consensus_14630#1 ------------------------------------------------------------ consensus_14630#0 TTCAACGATTCAAGTGTGGTTGATGCAATTCAAAAAAAA 2979 consensus_14630#1 --------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||