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Oryza sativa
cluster # 14643 cluster # 14643       Sequences # 17       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14643#0 length = 1571 sequences # 9  
consensus_14643#1 length = 707 sequences # 2  
consensus_14643#2 length = 702 sequences # 3  
consensus_14643#3 length = 685 sequences # 1  
consensus_14643#4 length = 431 sequences # 1  
consensus_14643#5 length = 284 sequences # 1  

consensusID : consensus_14643#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1571
fasta sequence
                              [TCCTCGCTCTCTCTCTCTCTTCCTCTCTCGCTTCGCTTTTCTCCCCCAAATCGGATCGAACAAAATTCGTAAATTAATCTCATAAAAACACACACGAAGCGAACGGATTCGAAGAGAGCTTAACACGAGACGGCTTCGATCGATCCCGTTTTGGGGAGCTAATCGTGTGGTTTTTGTTGGATTGTTTTTTTTGGGTGTTAATCTAGGGTTAGGGTTTCGGATCTGGACGATTAGTCCCCAAATCCATCCATGAATGACCCCATGATGCGGCCACCGGCGCAGCAGCCGCCGCTGCAGTACCAGATGTGGCCGCCGCCGCCGCCGCCGGTGATGGAGTTGCCGGTGGTGTTCGTCGGGGTGAAGCCGGTGAGGCCGGCGTGGAAGCGGGTGGCGAGGCAGCCGGGGTGGAAGCAGCGGAAGGCGGCGGCGTCGGCGGCGGCGGTGGGGGCGAGGTGGGGCGGTGCGGCGGCGCCCCGCAACACGACGTCGTACCTGATCCGGGCCAAGCGGGCGGGGGGCGTGGCGTCGCTGGTGTCGCCGTGCCCCGTCACGCCGGCCGTGCTGCCGACGCCGCAGCTGTCGCCGGCGCGCGAGGTGGTGGTGGAGATGGCCAAGGAGAAGTGGGGCGTCGACGGGTACGGCTCCATGAAGGGCCTCATCCGCCTCCGCTCCCAGGCCGCCGACGCCGGTGGCCTCCCCGGCGAGGACTCCGGATCCGGCGAGAGCGACGTGGAGGAGCACGTCGAGGTGGAGCGCCGCCTCGACCACGACCTCAGCCGCTTCGAGATGGTGCAGCTCCCCGTCGCGGCCGGCGACTGCGAGGACGACGAAGACGACGACGA-CGGCGACGAGGCCCGCACCGCGCGGCTGGAGGAGGAGAACCTGACCCTGCGCGAGCGGCTGTTCCTGATGGAGCGCGACATGGACGACCTCCGCCGCCGCCTCCTCGCCGTGGAAACCCTCTGCCGCGACCGCCACCGCGACGGCTGCGTGGTGGACGCTGCCGGCGTCGTCGCCGAGGAGACGGTG-CTCTCCGAGAGCGTCGCCGGCGCCGACCTCGCCGGAGTCGGAGACGACGACGGTGACACGGCGGCGGACGCCATGAAAGCGTGAAG-CAGACAAGGGCTTGTACTACTCAACTGTACATAGGTTTCCGGGTTTCCCCTGTGCAGATGTTGATGTGAAGAGTAGGCAGAAGCAGCTTTAGCTTAGAAATTAC---TCTTCTTCTTTGCATCCTTCCTGTGGTTTAATCTTGATTTTTGTTATTACTTGTTTAGCAGCAGCTTGATCATCTCTTTGTAGTACTAGTTCGGTTCCATTTCTTCTTGTAGAATCAAATCAGCCAATGGATGATGATGATGATGAAATTGGGTAGGCAGGCAAGAACACAAGATGTGGGTGTTCTTCTTCTGCTCCTGTAGATCCCTCATCAACTACTCTCCTAGTCTCCTAGATAGATAGACTATTATCTTAGAGTATGATGTTAGTACCAA-AAGATATTCAGTAACCTGCTCGGTGTATGCTA-TGAATTTCAAATC-CAAA-GTGTTTGTTTAG-TTGTTCAAAAAAAAAGA]

[+] EMBL AK070189             [TCCTCGCTCTCTCTCTCTCTTCCTCTCTCGCTTCGCTTTTCTCCCCCAAATCGGATCGAACAAAATTCGTAAATTAATCTCATAAAAACACACACGAAGCGAACGGATTCGAAGAGAGCTTAACACGAGACGGCTTCGATCGATCCCGTTTTGGGGAGCTAATCGTGTGGTTTTTGTTGGATTGTTTTTTTTGGGTGTTAATCTAGGGTTAGGGTTTCGGATCTGGACGATTAGTCCCCAAATCCATCCATGAATGACCCCATGATGCGGCCACCGGCGCAGCAGCCGCCGCTGCAGTACCAGATGTGGCCGCCGCCGCCGCCGCCGGTGATGGAGTTGCCGGTGGTGTTCGTCGGGGTGAAGCCGGTGAGGCCGGCGTGGAAGCGGGTGGCGAGGCAGCCGGGGTGGAAGCAGCGGAAGGCGGCGGCGTCGGCGGCGGCGGTGGGGGCGAGGTGGGGCGGTGCGGCGGCGCCCCGCAACACGACGTCGTACCTGATCCGGGCCAAGCGGGCGGGGGGCGTGGCGTCGCTGGTGTCGCCGTGCCCCGTCACGCCGGCCGTGCTGCCGACGCCGCAGCTGTCGCCGGCGCGCGAGGTGGTGGTGGAGATGGCCAAGGAGAAGTGGGGCGTCGACGGGTACGGCTCCATGAAGGGCCTCATCCGCCTCCGCTCCCAGGCCGCCGACGCCGGTGGCCTCCCCGGCGAGGACTCCGGATCCGGCGAGAGCGACGTGGAGGAGCACGTCGAGGTGGAGCGCCGCCTCGACCACGACCTCAGCCGCTTCGAGATGGTGCAGCTCCCCGTCGCGGCCGGCGACTGCGAGGACGACGAAGACGACGACGA CGGCGACGAGGCCCGCACCGCGCGGCTGGAGGAGGAGAACCTGACCCTGCGCGAGCGGCTGTTCCTGATGGAGCGCGACATGGACGACCTCCGCCGCCGCCTCCTCGCCGTGGAAACCCTCTGCCGCGACCGCCACCGCGACGGCTGCGTGGTGGACGCTGCCGGCGTCGTCGCCGAGGGGACGGTG CTCTCCGAGAGCGTCGCCGGCGCCGACCTCGCCGGAGTCGGAGACGACGACGGTGACACGGCGGCGGACGCCATGAAAGCGTGAAG CAGACAAGGGCTTGTACTACTCAACTGTACATAGGTTTCCGGGTTTCCCCTGTGCAGATGTTGATGTGAAGAGTAGGCAGAAGCAGCTTTAGCTTAGAAATTAC   TCTTCTTCTTTGCATCCTTCCTGTGGTTTAATCTTGATTTTTGTTATTACTTGTTTAGCAGCAGCTTGATCATCTCTTTGTAGTACTAGTTCGGTTCCAT                                                                                                                                                                                                                                                                 ]
[+] EMBL CB652204             [                                                       TCCATCAAAAGTCGTAAATTAATCTCATAAAAACACACACGAAGCGAACGGATTCGAAGAGAGCTTAACACGAGACGGCTTCGATCGATCCCGTTTTGGGGAGCTAATCGTGTGGTTTTTGTTGGATTGTTTTTTTTGGGTGTTAATCTAGGGTTAGGGTTTCGGATCTGGACGATTAGTCCCCAAATCCATCCATGAATGACCCCATGATGCGGCCACCGGCGCAGCAGCCGCCGCTGCAGTACCAGATGTGGCCGCCGCCGCCGCCGCCGGGGATGGAGTTGCCGGTGGTGTTCGTCGGGGTGAAGCCGGTGAGGCCGGCGTGGAGGCGGGTGGCGAGGCAGCCGGGGTGGAAGCAGCGGAAGGCGGCGGCGTCAGCGGCGGCGGTGGGGGCCAGGTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB652205             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GACGTCGTACCTGATCCGGGCCAAGCGGGCGGGGGGCGTGGCGTCGTTGGTGTCGCCGTGCCCCGTCACGCCGGCCGTGCTGCCGACGCCGCAGCTGTCGCCGGCGCGCGAGGTGGTGGTGGAGATGGCCAAGGAGAAGTGGGGCGTCGACGGGTACGGCTCCATGAAGGGCCTCATCCGCCTCCGCTCCCAGGCCGCCGACGCCGGTGGCCTCCCCGGCGAGGACTCCGGATCCGGCGAGAGCGACGTGGAGGAGCACGTCGAGGTGGAGCGCCGCCTCGACCACGACCTCAGCCGCTTCGAGATGGTGCAGCTCCCCGTCGCGGCCGGCGACTGCGAGGACGACGAAGACGACGACGA CGGCGACGAGGCCCGCACCGCGCGGCTGGAGGAGGAGAACCTGACCCTGCGCGAGCGGCTGTTCCTGATGGAGCGCGACATGGACGACCTCCGCCGCCGCCTCCTCGCCGTGGAAACCCTCTGCCGCGACCGCCACCGCGACGGCTGCGTGGTGGACGCTGCCGGCGTCGTCGCCGAGGAGACGGTG CTCTCCGAGAGCGTCGCCGGCGCCGACCTCGCCGGAGTCGGAGACGACGACGGTGACACGGCGGCGGACGCCATGAAAGCGTGAAG CAGACAAGGGCTTGTACTACTCAACTGTACATAGGTTTCCGGGTTTCCCCTGTGCAGATGTTGATGTGAAGAGTAGGCAGAAGCAGCTTTAGCTTAGAAATTAC   TCTTCTTCTTTGCATCCTACGGGTGGTTTAATCTTGAT                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB671264             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ACCTGATCCTGGCCAAGCGGGCGGGGGGCGTGGCGTCACTGGTGTCGCCGTGCCCCGTCACGCCGGCCGTGCTGCCGACGCCGCAGCTGTCGCCGGCGCGCGAGGTGGTGGTGGAGATGGCCAAGGAGAAGTGGGGCGTCTACGGGTACGGCTCCATGAAGGGCCTCATCCGCCTCCGCTCCCAGGCCGCCGACGCCGGTGGCCTCCCCGGCGAGGACTCCGGATCCGGCGAGAGCGACGTGGAGGAGCACGTCGAGGTGGAGCGCCGCCTCAACCACGACCTCAGCCGCTTCTAGATGGTGCAGCTCCCCGTCGCGGCCGGCGACTGCGAGGACGACGAAGACGACGACCA CGGCGACGAGGCCCGCACCGCGCGGCTGGAGGATGAGAACCTGACTCTGCGCGAGCGGCTGTTCCTGATGGAGCGCGACATGGACGACCTCCGCCGCCGCCTCCTCGCCGTGGAAACCCTCTGCCGCGACCGCCACCGCGACAGCTGCGTGGTGGACGCTGCCGGCGTCCTCGCCGAGGAGACGGTG CTCTCCGAGAGCGTCGCCGGCGCCGACCTCGCCGGAGTCGGAGACTACGACGGTGACACGGCGGCGGACGCCATGAAAGCGTGAAG CAGACAAGGGCTTGTACTACTCAACTGTACATAGGTTTCCGGGTTTCCCCTGTGCAGATGTTGATGTGAAGAGTAGGCAGAAGCAGCTTTAGCTTAGAAATTAC   TCT                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM420782             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CTCAGCCGCTTCGAGATGGTGCAGCTCCCCGTCGC GCCGGCGACTGCGAGGACGACGAAGACGACGACGATCGGCGACGAGGCCCGCACCGCGCGGCTGGAGGAGGAGAACCTGACCCTGCGCGAGCGGCTTTTCCTGATGGAGCGCGACATGGACGACCTCCGCCGCCGCCTCCTCGCCGTGGAAACCCTCTGCCGCGACCGCCACCACGACGGCTGCGTGGTGGACGCTGCCGGCGTCGTCGCCGAGGAGACGGTGTCTCTCCGAGAGCGTCGCCGGCGCCGACCTCGCCGGAGTCGGAGACGACGACGGTGACACGGCGGCGGACGCCATGAAAGCGTGAAGCCAGACAAGGGCTTGTACTACTCAACTGTACATAGGTTTCCGGGTTTCCCCTGTGCAGATGTTGATGTGAAGAGTAGGCAGAA CAGCTTTAGCTTAGAAATTACTATTCTTCTTCTTTGCATCCTTCCTGTGGTTTAATCTTGATTTTTGTTATTACTTttaaaaa                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB671265             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GCTCCCCGTCGCGGCCGGCGACTGCGAGGACGACGAAGACGACGACGA CGGCGACGAGGCCCGCACCGCGCGGCTGGAGGAGGAGAACCTGACTCTGCGCGAGCGGCTGTTCCTGATGGAGCGCGACATGGACGACCTCCGCCGCCGCCTCCTCGCCGTGGAAACCCTCTGCCGCGACCGCCACCGCGACGGCTGCGTGGTGGACGCTGCCGGCGTCGTCGCCGAGGAGACGGTG CTCTCCGAGAGCGTCGCCGGCGCCGACCTCGCCGGAGTCGGAGACGACGACGGTGACACGGCGGCGGACGCCATGAAAGCGTGAAG CAGACAAGGGCTTGTACTACTCAACTGTACATAGGTTTCCGGGTTTCCCCTGTGCAGATGTTGATGTGAAGAGTAGGCAGAAGCAGCTTTAGCTTAGAAATTAC   TCTTCTTCTTTGCATCCTTCCTGTGGTTTAATCTTGATTTTTGTTATTACTTGTTTAGCAGCAGCTTGATCATCTCTTTGTAGTACTAGTTCGGTTCCATTTCTTCTTGTAGAATCAAATCAGCCAATGGATGATGATGATGATGAAATTGGGTAGGCAGGCAAGAACACAAGATGTGGGTGTTCTTCTTCTGCTCCTGTAGATCCCTCATCAACTACTCTCCTAGTCTCCTAGATAGATAGACTATTATCTTAGAGTATGATGTTAGTACCAA AAGATATTCAGTAACCTGCTCGGTGTATGCT                                                   ]
[-] EMBL CB645810             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GACTGCGAGGACGACGAAGACGACGACGA CGGCGACGAGGCCCGCACCGCGCGGCTGGAGGAGGAGAACCTGACCCTGCGCGAGCGGCTGTTCCTGATGGAGCGCGACATGGACGACCTCCGCCGCCGCCTCCTCGCTGTGGAAACCCTCTGCCGCGACCGCCACCGCGACGGCTGCGTGGTGGACGCTGCCGGCGTCGTCGCCGAGGAGACGGTG CTCTCCGAGAGCGTCGCCGGCGCCGACCTCGCCGGAGTCGGAGACGACGACGGTGACACGGCGGCGGACGCCATGAAAGCGTGAAG CAGACAAGGGCTTGTACTACTCAACTGTACATAGGTTTCCGGGTTTCCCCTGTGCAGATGTTGATGTGAAGAGTAGGCAGAAGCAGCTTTAGCTTAGAAATTAC   TCTTCTTCTTTGCATCCTTCCTGTGGTTTAATCTTGATTTTTGTTATTACTTGTTTAGCAGCAGCTTGATCATCTCTTTGTAGTACTAGTTCGGTTCCATTTCTTCTTGTAGAATCAAATCAGCCAATGGATGATGATGATGATGAAATTGGGTAGGCAGGCAAGAACACAAGATGTGGGTGTTCTTCTTCTGCTCCTGTAGATCCCTCATCAACTACTCTCCTAGTCTCCTAGATAGATAGACTATTATCTTAGAGTATGATGTTAGTACCAA AAGATATTCAGTAACCTGCTCGGTGTATGCTA TGAATTTCAAATC CAAA GTGTTTGTTTAG TTGTTAAAAAAAAAAGA]
[-] EMBL CB678974             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ACTGCGAGGACGACGAAGACGACGACGA CGGCGACGAGGCCCGCACCGCGCGGCTGGAGGAGGAGAACCTGACCCTGCGCGAGCGGCTGTTCCTGATGGAGCGCGACATGGACGACCTCCGCCGCCGCCTCCTCGCCGTGGAAACCCTCTGCCGCGACCGCCACCGCGACGGCTGCGTGGTGGACGCTGCCGGCGTCGTCGCCGAGGAGACGGTG CTCTCCGAGAGCGTCGCCGGCGCCGACCTCGCCGGAGTCGGAGACGACGACGGTGACACGGCGGCGGACGCCATGAAAGCGTGAAG CAGACAAGGGCTTGTACTACTCAACTGTACATAGGTTTCCGGGTTTCCCCTGTGCAGATGTTGATGTGAAGAGTAGGCAGAAGCAGCTTTAGCTTAGAAATTAC   TCTTCTTCTTTGCATCCTTCCTGTGGTTTAATCTTGATTTTTGTTATTACTTGTTTAGCAGCAGCTTGATCATCTCTTTGTAGTACTAGTTCGGTTCCATTTCTTCTTGTAGAATCAAATCAGCCAATGGATGATGATGATGATGAAATTGGGTAGGCAGGCAAGAACACAAGATGTGGGTGTTCTTGTTCTGCTCCAGTAGATCCCTCATCAACTATTCTCGTAGTCTCTTAGATAGATAGACTATTATCTTAGAGTATGATGTTAGTACCAACAAGATATTCAGTAACCTGCTCGGTGTATGCTAGAGAATTTCAAATCACAAACGTGTTTGTTTAG TCGTTCAAAAAggga  ]
[+] EMBL BI812612             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AAATTACTATTCTTCTTCTTTGCATCCTTCCTGTGGTTTAATCTTGATTTTTGTTATTACTTGTTTA CAGCAGCTTGATCATCTCTTTGTAGTACTAGTTCGGTTCCATTTCTTCTTGTAGAATCAAATCAGCCAATGGATGATGATGATGATGAAATTGGGTAGGCAGGCAAGAACACAAGATGTGGGTG   TTCTTCTGCTCCTGTAGATCCCTCATCAACTACTCTCCTAGTCTCCTAGATAGATAGACTATTATCTTAGAGTATGATGTTAGTACC A AAGATATTCAGTAACCTGCTCGGTGTATGCTA TGAATTTCAAATC C AA GTGTTTGTTTAGTTTGTTCAAAAAA     ]


>consensus_14643#0 TCCTCGCTCTCTCTCTCTCTTCCTCTCTCGCTTCGCTTTTCTCCCCCAAATCGGATCGAA CAAAATTCGTAAATTAATCTCATAAAAACACACACGAAGCGAACGGATTCGAAGAGAGCT TAACACGAGACGGCTTCGATCGATCCCGTTTTGGGGAGCTAATCGTGTGGTTTTTGTTGG ATTGTTTTTTTTGGGTGTTAATCTAGGGTTAGGGTTTCGGATCTGGACGATTAGTCCCCA AATCCATCCATGAATGACCCCATGATGCGGCCACCGGCGCAGCAGCCGCCGCTGCAGTAC CAGATGTGGCCGCCGCCGCCGCCGCCGGTGATGGAGTTGCCGGTGGTGTTCGTCGGGGTG AAGCCGGTGAGGCCGGCGTGGAAGCGGGTGGCGAGGCAGCCGGGGTGGAAGCAGCGGAAG GCGGCGGCGTCGGCGGCGGCGGTGGGGGCGAGGTGGGGCGGTGCGGCGGCGCCCCGCAAC ACGACGTCGTACCTGATCCGGGCCAAGCGGGCGGGGGGCGTGGCGTCGCTGGTGTCGCCG TGCCCCGTCACGCCGGCCGTGCTGCCGACGCCGCAGCTGTCGCCGGCGCGCGAGGTGGTG GTGGAGATGGCCAAGGAGAAGTGGGGCGTCGACGGGTACGGCTCCATGAAGGGCCTCATC CGCCTCCGCTCCCAGGCCGCCGACGCCGGTGGCCTCCCCGGCGAGGACTCCGGATCCGGC GAGAGCGACGTGGAGGAGCACGTCGAGGTGGAGCGCCGCCTCGACCACGACCTCAGCCGC TTCGAGATGGTGCAGCTCCCCGTCGCGGCCGGCGACTGCGAGGACGACGAAGACGACGAC GACGGCGACGAGGCCCGCACCGCGCGGCTGGAGGAGGAGAACCTGACCCTGCGCGAGCGG CTGTTCCTGATGGAGCGCGACATGGACGACCTCCGCCGCCGCCTCCTCGCCGTGGAAACC CTCTGCCGCGACCGCCACCGCGACGGCTGCGTGGTGGACGCTGCCGGCGTCGTCGCCGAG GAGACGGTGCTCTCCGAGAGCGTCGCCGGCGCCGACCTCGCCGGAGTCGGAGACGACGAC GGTGACACGGCGGCGGACGCCATGAAAGCGTGAAGCAGACAAGGGCTTGTACTACTCAAC TGTACATAGGTTTCCGGGTTTCCCCTGTGCAGATGTTGATGTGAAGAGTAGGCAGAAGCA GCTTTAGCTTAGAAATTACTCTTCTTCTTTGCATCCTTCCTGTGGTTTAATCTTGATTTT TGTTATTACTTGTTTAGCAGCAGCTTGATCATCTCTTTGTAGTACTAGTTCGGTTCCATT TCTTCTTGTAGAATCAAATCAGCCAATGGATGATGATGATGATGAAATTGGGTAGGCAGG CAAGAACACAAGATGTGGGTGTTCTTCTTCTGCTCCTGTAGATCCCTCATCAACTACTCT CCTAGTCTCCTAGATAGATAGACTATTATCTTAGAGTATGATGTTAGTACCAAAAGATAT TCAGTAACCTGCTCGGTGTATGCTATGAATTTCAAATCCAAAGTGTTTGTTTAGTTGTTC AAAAAAAAAGA



consensusID : consensus_14643#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 707
fasta sequence
                              [TCTTTTTTTTTTCATGAACTGTAATGAACAGGCAGCAGTGATCTCTTTTATATCTTACAAACTCGCATACAAAGACATC-TCCTTTTTGTCAGGA-ATTCATATTTACAATTTCTGACGTTTCGCGGTGTATGCACAAAGCTCATGTTATTTATTTGCTTAATCACACATAAGATTTAGGAAAGATAAACTTTTTTTACCTTTCCCTTGTGACAAAACTCTCCAAACCAAACACCTCCATGTCTCCCAAAATCTGAAACCTTCAGCGATTCATCCCTTCACAGAAGAGCAGCAATTCACCGTGAAATCTCGTCGGCGTTGTTGCCGGCGCCGGCGGCGGCGGACTGGCCGGACCTGCCGTGGCCGCCGAAGGACACCGACCTGGTCGCTCCGATGCCGGCCATCTCCAACACTTCCGAGAATTTCATCAGTCGAGCGATCTTGGCGAGGCCCATCTCGCCCATGCGCCCACTGTTCGACGCCGGCGACCGGAGCGAGACCTCCGGCCATGGCCGCCTCGGCAGCGTCACCATCGACGCGGCTCGCCTGACGCCGCGCTCCGGCGAGCCCTGGAGCTCTCCTCTGTCGGCTTCGGCGGCAGCTGCGTTGCGCGGGTTCGGCGCGGGCGCGCCGCCGGGAACGGCCGCGGCGGCGCCCGGCGCGGCGTTGGCCGCCGCCGCCGCGGCGGCGGCGGCGGACTTGTCCCTGAT]

[+] EMBL CB649484             [TCTTTTTTTTTTCATGAACTGTAATGAACAGGCAGCAGTGATCTCTTTTATATCTTACAAACTCGCATACAAAGACATC TCCTTTTTGTCAGGA ATTCATATTTACAATTTCTGACGTTTCGCGGTGTATGCACAAAGCTCATGTTATTTATTTGCTTAATCACACATAAGATTTAGGAAAGATAAACTTTTTTTACCTTTCCCTTGTGACAAAACTCTCCAAACCAAACACCTCCATGTCTCCCAAAATCTGAAACCTTCAGCGATTCATCCCTTCACAGAAGAGCAGCAATTCACCGTGAAATCTCGTCGGCGTTGTTGCCGGCGCCGGCGGCGGCGGACTGGCCGGACCTGCCGTGGCCGCCGAAGGACACCGACCTGGTCGCTCCGATGCCGGCCATCTCCAACACTTCCGAGAATTTCATCAGTCGAGCGATCTTGGCGAGGCCCATCTCGCCCATGCGCCCACTGTTCGACGCCGGCGACCGGAGCGAGACCTCCGGCCATGGCCGCCTCGGCAGCGTCACCATCGACGCGGCTCGCCTGACGCCGCGCTCCGGCGAGCCCTGGAGCTCTCCTCTGTCGGCTTCGGCGGCAGCTGCGTTGCGCGGGTTCGGCGCGGGCGCGCCGCCGGGAACGGCCGCGGCGGCGCCCGGCGCGGCGTTGGCCGCCGCCGCCGCGGCGGCGGCGGCGGACTTGTCCCTGAT]
[+] EMBL CB650098             [                                    AGAGATCTCTTTTATATCTTACAAACTCGCATACAAAGACATCTTCCTTTTTGTCAGGATATTCATATTTACAATTTCTGACCTTTCGCGGCGTATGCACAAAGCTCATGTAATTTATTTGCTTAATCACACATAAGATTTACGAAAGATAAACTTTTTTTACCTTTCCCTTGTGACAAAACTCTCCAAACCAAACACCTCCATGTCTCCCAAAATCTGAAACCTTCAGCGATTCATCCCTTCACAGAACAACAGCAATTCACCGTGAAATCTCTGCTGCGTTGATGCCGGCGCCGGCGGCGGCGGACTGGCCGGACCTGCCGTGGCCGCCCAAGGACACCGACCTGGTCGCTCCTATGCCGGCCATCTCCAACACTTCCGAGAATTTCATCAGTCGAGCGATCTTGGCGAGGCCCATCTCGCCCATGCGCCCACTGTTCGACGCCGGCGACCGGAGCGAGACCTCCGGCCATGGCCGCCTCGGCAGCGTCACCATCGACGCGGCTCGCCTGACGCCGCGCTCCGGCGAGCCCTGGAGCTCTCCTCTGTCGGCTTCGGCGGCAGCTGCGTTGCGCGGGTTCGGCGCGGGCGCGCCGCCGGGAACGGCCGCGGCGGCGCCCGGCGCGGCGTTGGCCGCCGCCGCCGCGGCGGCGGCG                 ]


>consensus_14643#1 TCTTTTTTTTTTCATGAACTGTAATGAACAGGCAGCAGTGATCTCTTTTATATCTTACAA ACTCGCATACAAAGACATCTCCTTTTTGTCAGGAATTCATATTTACAATTTCTGACGTTT CGCGGTGTATGCACAAAGCTCATGTTATTTATTTGCTTAATCACACATAAGATTTAGGAA AGATAAACTTTTTTTACCTTTCCCTTGTGACAAAACTCTCCAAACCAAACACCTCCATGT CTCCCAAAATCTGAAACCTTCAGCGATTCATCCCTTCACAGAAGAGCAGCAATTCACCGT GAAATCTCGTCGGCGTTGTTGCCGGCGCCGGCGGCGGCGGACTGGCCGGACCTGCCGTGG CCGCCGAAGGACACCGACCTGGTCGCTCCGATGCCGGCCATCTCCAACACTTCCGAGAAT TTCATCAGTCGAGCGATCTTGGCGAGGCCCATCTCGCCCATGCGCCCACTGTTCGACGCC GGCGACCGGAGCGAGACCTCCGGCCATGGCCGCCTCGGCAGCGTCACCATCGACGCGGCT CGCCTGACGCCGCGCTCCGGCGAGCCCTGGAGCTCTCCTCTGTCGGCTTCGGCGGCAGCT GCGTTGCGCGGGTTCGGCGCGGGCGCGCCGCCGGGAACGGCCGCGGCGGCGCCCGGCGCG GCGTTGGCCGCCGCCGCCGCGGCGGCGGCGGCGGACTTGTCCCTGAT



consensusID : consensus_14643#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 702
fasta sequence
                              [CATCGCACTTATTACTTCGTCAGCATAATTAGCATTCACCTGACGACCACACACACACCACCACCACCGCCGCGTCGCCATTCCACACCTGCCTCAAGCAGCGCACGCCATCGCC-GTCTCCTCCTCTTCTCCGGCGTCCAAGAACCCCTCCCGTGCCCCGGCCATGCCGCCGCCGGAGCCGGACAAGGACAAGCCGCTGCCGAAGCCCAAGCCGCCCAAGCCCAAGCCCAAGCCGCCCAAGCCGGAGCCGGAGCCGAACACGCGCTCGGCGCCGGAGCGCGACCAGACGGCCGCCCCGTACGGCACGGTGCCCCCCGACCCCTTGTCCTGCGCCACCGACTGCTCGCCGGACTGCGTGTTCTACCACCTGTGCCCTTCGCCGCCGCCGCCGGTGGCGCCCGTGCATCTGAGGTCGTCGCGGCTGCCCACGCCGCTCATCGCGCTGTCGGCGTCGCTGCTCGGCGTGTCGGTGGTGCTGCTCGTCGCGTTGCTGGTGTGTCGGCTTATGAGGGGGAGGGGGAGGAGGGACCTCCGGCCATGGCCGCCTCGGCAGCGTCACCATCGACGCGGCTCGCCTGACGCCGCGCTCCGGCGAGCCCTGGAGCTCTCCTCTGTCGGCTTCGGCGGCAGCTGCGTTGCGCGGGTTCGGCGCGGGCGCGCCGCCGGGAACGGCCGCGGCGGCGCCCGGCGCGGCGTTGGCCG]

[+] EMBL CB649483             [CATCGCACTTATTACTTCGTCAGCATAATTAGCATTCACCTGACGACCACACACACACCACCACCACCGCCGCGTCGCCATTCCACACCTGCCTCAAGCAGCGCACGCCATCGCC GTCTCCTCCTCTTCTCCGGCGTCCAAGAACCCCTCCCGAGCCCCGGCCATGCCGCCGCCGGAGCCGGACAAGGACAAGCCGCTGCCGAAGCCCAAGCCGCCCAAGCCCAAGCCCAAGCCGCCCAAGCCGGAGCCGGAGCCGAACACGCGCTCGGCGCCGGAGCGCGACCAGACGGCCGCCCCGTACGGCACGGTGCCCCCCGACCCCTTGTCCTGCGCCACCGACTGCTCGCCGGACTGCGTGTTCTACCACCTGTGCCCTTCGCCGCCGCCGCCGGTGGCGCCCGTGCATCTGAGGTCGTCGCGGCTGCCCACGCCGCTCATCGCGCTGTCGGCGTCGCTGCTCGGCGTGTCGGTGGTGCTGCTCGTCGCGTTGCTGGTGTGTCGGCTTATGAGGGGGAGG                                                                                                                                                                                         ]
[+] EMBL CB650097             [                                                                                  CCACACC CTTTAAAGCAGCGCACGCCATCGCCTGTCTCCTCCTCTTCTCCGGCGTCCAAGAACCCCTCCCGTGCCCCGGCCCCGCCGCCGCCGGAGCCGGACAAGGACAAGCCGCTGCCGAAGCCCAAGCCGCCCAAGCCCAAGCCCAAGCCGCCCAAGCCGGAGCCGGAGCCGAACACGCGCTCGGCGCCGGAGCGCGACCAGACGGCCGCCCCGTACGGCACGGTGCCCCCCGACCCCTTGTCCTGCGCCACCGACTGCTCGCCGGACTGCGTGTTCTACCACCTGTGCCCTTCGCCGCCGCCGCCGGTGGCGCCCGTGCATCTGAGGTCGTCGCGGCTGCCCACGCCGCTCATCGCGCTGTCGGCGTCGCTGCTCGGCGTGTCGGTGGTGCTGCTCGTCGCGTTGCTGGTGTGTCGGCTTATGAGGGGGAGGGGGAGGAGGGACCTCCGGCCATGGCCGCCTCGGCAGCGTCACCATCGACGCGGCTCGCCTGACGCCGCGCTCCGGCGAGCCCTGGAGCTCTCCTCTGTCGGCTTCGGCGGCAGCTGCGTTGCGCGGGTTCGGCGCGGGCGCGCCGCCGGGAACGGCCGCGGCGGCGCCCGGCGCGGCGTTGGCCG]
[+] EMBL CB645845             [                                                                                  CCACACCT CGTCAAGCAGCGCACGCCATCGCC GTCTCCTCCTCTTCTCCGGCGTCCAAGAACCCCTCCCGTGCCCCGGCCATGCCGCCGCCGGAGCCGGACAAGGACAAGCCGCTGCCGAAGCCCAAGCCGCCCAAGCCCAAGCCCAAGCCGCCCAAGCCGGAGCCGGAGCCGAACACGCGCTCGGCGCCGGAGCGCGACCAGACGGCCGCCCCGTACGGCACGGTGCCCCCCGACCCCTTGTCCTGCGCCACCGACTGCTCGCCGGACTGCGTGTTCTACCACCTGTGCCCTTCGCCGCCGCCGCCGGTGGCGCCCGTGCATCTGAGGTCGTCGCGGCTGCCCACGCCGCTCATCGCGCTGTCGGCGTCGCTGCTCGGCGTGTCGGTGGTGCTGCTCGTCGCGTTGCTGGTGTGTCGGCTTATGAGGGGGAGG                                                                                                                                                                                         ]


>consensus_14643#2 CATCGCACTTATTACTTCGTCAGCATAATTAGCATTCACCTGACGACCACACACACACCA CCACCACCGCCGCGTCGCCATTCCACACCTGCCTCAAGCAGCGCACGCCATCGCCGTCTC CTCCTCTTCTCCGGCGTCCAAGAACCCCTCCCGTGCCCCGGCCATGCCGCCGCCGGAGCC GGACAAGGACAAGCCGCTGCCGAAGCCCAAGCCGCCCAAGCCCAAGCCCAAGCCGCCCAA GCCGGAGCCGGAGCCGAACACGCGCTCGGCGCCGGAGCGCGACCAGACGGCCGCCCCGTA CGGCACGGTGCCCCCCGACCCCTTGTCCTGCGCCACCGACTGCTCGCCGGACTGCGTGTT CTACCACCTGTGCCCTTCGCCGCCGCCGCCGGTGGCGCCCGTGCATCTGAGGTCGTCGCG GCTGCCCACGCCGCTCATCGCGCTGTCGGCGTCGCTGCTCGGCGTGTCGGTGGTGCTGCT CGTCGCGTTGCTGGTGTGTCGGCTTATGAGGGGGAGGGGGAGGAGGGACCTCCGGCCATG GCCGCCTCGGCAGCGTCACCATCGACGCGGCTCGCCTGACGCCGCGCTCCGGCGAGCCCT GGAGCTCTCCTCTGTCGGCTTCGGCGGCAGCTGCGTTGCGCGGGTTCGGCGCGGGCGCGC CGCCGGGAACGGCCGCGGCGGCGCCCGGCGCGGCGTTGGCCG



consensusID : consensus_14643#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 685
fasta sequence
                              [CCTTTTTTTTACAGGCAGCAGTGATCTCTTTTATATCTTACCTATTCGCATACAAAGACATCTCCTTTTTGTCAGGAATTCATATTTACAATTTCTGACGTTTCGCGGTGTATGCACAAAGCTCATGTTATTTATTTGCTTAATCACACATAAGATTTAGGAAAGATAAACTTTTTTTACCTTTCCCTTGTGACAAAACTCTCCAAACCAAACACCTCCATGTCTCCCAAAATCTGAAACCTTCAGCGATTCATCCCTTCACAGAAGAGCAGCAATTCACCGTGAAATCTCGTCGGCGTTGTTGCCGGCGCCGGCGGCGGCGGACTGGCCGGACCTGCCGTGGCCGCCGAAGGACACCGACCTGGTCGCTCCGATGCCGGCCATCTCCAACACTTCCGAGAATTTCATCAGTCGAGCGATCTTGGCGAGGCCCATCTCGCCCATGCGCCCACTGTTCGACGCCGGCGACCGGAGCGAGACCTCCGGCCATGGCCGCCTCGGCAGCGTCACCATCGACGCGGCTCGCCTGACGCCGCGCTCCGGCGAGCCCTGGAGCTCTCCTCTGTCGGCTTCGGCGGCAGCTGCGTTGCGCGGGTTCGGCGCGGGCGCGCCGCCGGGAACGGCCGCGGCGGCGCCCGGCGCGGCGTTGGCCGCCGCCGCCGCGGCGGCGGCGGCGGACTTGTCG]

[+] EMBL CB645846             [CCTTTTTTTTACAGGCAGCAGTGATCTCTTTTATATCTTACCTATTCGCATACAAAGACATCTCCTTTTTGTCAGGAATTCATATTTACAATTTCTGACGTTTCGCGGTGTATGCACAAAGCTCATGTTATTTATTTGCTTAATCACACATAAGATTTAGGAAAGATAAACTTTTTTTACCTTTCCCTTGTGACAAAACTCTCCAAACCAAACACCTCCATGTCTCCCAAAATCTGAAACCTTCAGCGATTCATCCCTTCACAGAAGAGCAGCAATTCACCGTGAAATCTCGTCGGCGTTGTTGCCGGCGCCGGCGGCGGCGGACTGGCCGGACCTGCCGTGGCCGCCGAAGGACACCGACCTGGTCGCTCCGATGCCGGCCATCTCCAACACTTCCGAGAATTTCATCAGTCGAGCGATCTTGGCGAGGCCCATCTCGCCCATGCGCCCACTGTTCGACGCCGGCGACCGGAGCGAGACCTCCGGCCATGGCCGCCTCGGCAGCGTCACCATCGACGCGGCTCGCCTGACGCCGCGCTCCGGCGAGCCCTGGAGCTCTCCTCTGTCGGCTTCGGCGGCAGCTGCGTTGCGCGGGTTCGGCGCGGGCGCGCCGCCGGGAACGGCCGCGGCGGCGCCCGGCGCGGCGTTGGCCGCCGCCGCCGCGGCGGCGGCGGCGGACTTGTCG]


>consensus_14643#3 CCTTTTTTTTACAGGCAGCAGTGATCTCTTTTATATCTTACCTATTCGCATACAAAGACA TCTCCTTTTTGTCAGGAATTCATATTTACAATTTCTGACGTTTCGCGGTGTATGCACAAA GCTCATGTTATTTATTTGCTTAATCACACATAAGATTTAGGAAAGATAAACTTTTTTTAC CTTTCCCTTGTGACAAAACTCTCCAAACCAAACACCTCCATGTCTCCCAAAATCTGAAAC CTTCAGCGATTCATCCCTTCACAGAAGAGCAGCAATTCACCGTGAAATCTCGTCGGCGTT GTTGCCGGCGCCGGCGGCGGCGGACTGGCCGGACCTGCCGTGGCCGCCGAAGGACACCGA CCTGGTCGCTCCGATGCCGGCCATCTCCAACACTTCCGAGAATTTCATCAGTCGAGCGAT CTTGGCGAGGCCCATCTCGCCCATGCGCCCACTGTTCGACGCCGGCGACCGGAGCGAGAC CTCCGGCCATGGCCGCCTCGGCAGCGTCACCATCGACGCGGCTCGCCTGACGCCGCGCTC CGGCGAGCCCTGGAGCTCTCCTCTGTCGGCTTCGGCGGCAGCTGCGTTGCGCGGGTTCGG CGCGGGCGCGCCGCCGGGAACGGCCGCGGCGGCGCCCGGCGCGGCGTTGGCCGCCGCCGC CGCGGCGGCGGCGGCGGACTTGTCG



consensusID : consensus_14643#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 431
fasta sequence
                              [TCTCCCTTTCGCTTTTCTCCCCCAAATCGGATCGAACAAAATTCGTAAATTAATCTCATAAAAACACACACGAAGCGAACGGATTCGAAGAGAGCTTAACACGAGACGGCTTCGATCGATACCGTTTTGGGGAGCTAATCGTGTGGTTTTTGTTGGATTGGGATTTTGGGGTGATAATCTACGGTGAGGGTGACGGATATGGAAGAGTAGTCCCCAAATCCATCCAGTGAATGACACCCATGATGCGGCCACCGGCGCTGCAGCCGCCGCTGCAGGACCAAATGTGGCCGCCCTTCGCCGCCGCCGGCGGTGGAGCCCGTGCATCTGAGGTCGTCGCGGCTGCCCACGCCGCTCATCGCGCTGTCGGCGTCGCTGCTCGGCGTGTCGGTGGTGCTGCTCGTCGCGTTGCTGGTGTGTCGGCTTATGAGGGG]

[+] EMBL CB645809             [TCTCCCTTTCGCTTTTCTCCCCCAAATCGGATCGAACAAAATTCGTAAATTAATCTCATAAAAACACACACGAAGCGAACGGATTCGAAGAGAGCTTAACACGAGACGGCTTCGATCGATACCGTTTTGGGGAGCTAATCGTGTGGTTTTTGTTGGATTGGGATTTTGGGGTGATAATCTACGGTGAGGGTGACGGATATGGAAGAGTAGTCCCCAAATCCATCCAGTGAATGACACCCATGATGCGGCCACCGGCGCTGCAGCCGCCGCTGCAGGACCAAATGTGGCCGCCCTTCGCCGCCGCCGGCGGTGGAGCCCGTGCATCTGAGGTCGTCGCGGCTGCCCACGCCGCTCATCGCGCTGTCGGCGTCGCTGCTCGGCGTGTCGGTGGTGCTGCTCGTCGCGTTGCTGGTGTGTCGGCTTATGAGGGG]


>consensus_14643#4 TCTCCCTTTCGCTTTTCTCCCCCAAATCGGATCGAACAAAATTCGTAAATTAATCTCATA AAAACACACACGAAGCGAACGGATTCGAAGAGAGCTTAACACGAGACGGCTTCGATCGAT ACCGTTTTGGGGAGCTAATCGTGTGGTTTTTGTTGGATTGGGATTTTGGGGTGATAATCT ACGGTGAGGGTGACGGATATGGAAGAGTAGTCCCCAAATCCATCCAGTGAATGACACCCA TGATGCGGCCACCGGCGCTGCAGCCGCCGCTGCAGGACCAAATGTGGCCGCCCTTCGCCG CCGCCGGCGGTGGAGCCCGTGCATCTGAGGTCGTCGCGGCTGCCCACGCCGCTCATCGCG CTGTCGGCGTCGCTGCTCGGCGTGTCGGTGGTGCTGCTCGTCGCGTTGCTGGTGTGTCGG CTTATGAGGGG



consensusID : consensus_14643#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 284
fasta sequence
                              [AGACCGGTGCTCTCCGAGAGCGTCGCCGGCGCCGACACTCGCCAGGAGTCGGAGACTGACGACAGGTGACACGGCAGGCAGACGCCATTGAAAGCGGTGAAACAAGACAAGGGCTTTGTACATACATCAACATGTACATAGGTTTCACAGGGTTTCCCCTGTGCAGATGTTGATGTGAAGAGTAGGCAGAAGCAGCTTTAGCTTAGAAATTACTCTTCTTCTTTGCATCACATTCACTGTGGTTTAATCTTGATTTTTGTTATTACTTGTTTAGCAAAAAAAAA]

[+] EMBL BI812536             [AGACCGGTGCTCTCCGAGAGCGTCGCCGGCGCCGACACTCGCCAGGAGTCGGAGACTGACGACAGGTGACACGGCAGGCAGACGCCATTGAAAGCGGTGAAACAAGACAAGGGCTTTGTACATACATCAACATGTACATAGGTTTCACAGGGTTTCCCCTGTGCAGATGTTGATGTGAAGAGTAGGCAGAAGCAGCTTTAGCTTAGAAATTACTCTTCTTCTTTGCATCACATTCACTGTGGTTTAATCTTGATTTTTGTTATTACTTGTTTAGCAAAAAAAAA]


>consensus_14643#5 AGACCGGTGCTCTCCGAGAGCGTCGCCGGCGCCGACACTCGCCAGGAGTCGGAGACTGAC GACAGGTGACACGGCAGGCAGACGCCATTGAAAGCGGTGAAACAAGACAAGGGCTTTGTA CATACATCAACATGTACATAGGTTTCACAGGGTTTCCCCTGTGCAGATGTTGATGTGAAG AGTAGGCAGAAGCAGCTTTAGCTTAGAAATTACTCTTCTTCTTTGCATCACATTCACTGT GGTTTAATCTTGATTTTTGTTATTACTTGTTTAGCAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14643#0      TCCTCGCTCTCTCTCTCTCTTCCTCTCTCGCTTCGCTTTTCTCCCCCAAATCGGATCGAA 60
consensus_14643#5      ------------------------------------------------------------
consensus_14643#4      ------------------------------------------------------------
consensus_14643#1      ------------------------------------------------------------
consensus_14643#3      ------------------------------------------------------------
consensus_14643#2      ------------------------------------------------------------
                                                                                   

consensus_14643#0      CAAAATTCGTAAATTAATCTCATAAAAACACACACGAAGCGAACGGATTCGAAGAGAGCT 120
consensus_14643#5      ------------------------------------------------------------
consensus_14643#4      ------------------------------------------------------------
consensus_14643#1      ------------------------------------------------------------
consensus_14643#3      ------------------------------------------------------------
consensus_14643#2      ------------------------------------------------------------
                                                                                   

consensus_14643#0      TAACACGAGACGGCTTCGATCGATCCCGTTTTGGGGAGCTAATCGTGTGGTTTTTGTTGG 180
consensus_14643#5      ------------------------------------------------------------
consensus_14643#4      ------------------------------------------------------------
consensus_14643#1      ------------------------------------------------------------
consensus_14643#3      ------------------------------------------------------------
consensus_14643#2      ------------------------------------------------------------
                                                                                   

consensus_14643#0      ATTGTTTTTTTTGGGTGTTAATCTAGGGTTAGGGTTTCGGATCTGGACGATTAGTCCCCA 240
consensus_14643#5      ------------------------------------------------------------
consensus_14643#4      ------------------------------------------------------------
consensus_14643#1      ------------------------------------------------------------
consensus_14643#3      ------------------------------------------------------------
consensus_14643#2      ------------------------------------------------------------
                                                                                   

consensus_14643#0      AATCCATCCATGAATGACCCCATGATGCGGCCACCGGCGCAGCAGCCGCCGCTGCAGTAC 300
consensus_14643#5      ------------------------------------------------------------
consensus_14643#4      ------------------------------------------------------------
consensus_14643#1      ------------------------------------------------------------
consensus_14643#3      ------------------------------------------------------------
consensus_14643#2      ------------------------------------------------------------
                                                                                   

consensus_14643#0      CAGATGTGGCCGCCGCCGCCGCCGCCGGTGATGGAGTTGCCGGTGGTGTTCGTCGGGGTG 360
consensus_14643#5      ------------------------------------------------------------
consensus_14643#4      ------------------------------------------------------------
consensus_14643#1      ------------------------------------------------------------
consensus_14643#3      ------------------------------------------------------------
consensus_14643#2      ------------------------------------------------------------
                                                                                   

consensus_14643#0      AAGCCGGTGAGGCCGGCGTGGAAGCGGGTGGCGAGGCAGCCGGGGTGGAAGCAGCGGAAG 420
consensus_14643#5      ------------------------------------------------------------
consensus_14643#4      ------------------------------------------------------------
consensus_14643#1      ------------------------------------------------------------
consensus_14643#3      ------------------------------------------------------------
consensus_14643#2      ------------------------------------------------------------
                                                                                   

consensus_14643#0      GCGGCGGCGTCGGCGGCGGCGGTGGGGGCGAGGTGGGGCGGTGCGGCGGCGCCCCGCAAC 480
consensus_14643#5      ------------------------------------------------------------
consensus_14643#4      ------------------------------------------------------------
consensus_14643#1      ------------------------------------------------------------
consensus_14643#3      ------------------------------------------------------------
consensus_14643#2      ------------------------------------------------------------
                                                                                   

consensus_14643#0      ACGACGTCGTACCTGATCCGGGCCAAGCGGGCGGGGGGCGTGGCGTCGCTGGTGTCGCCG 540
consensus_14643#5      ------------------------------------------------------------
consensus_14643#4      ------------------------------------------------------------
consensus_14643#1      ------------------------------------------------------------
consensus_14643#3      ------------------------------------------------------------
consensus_14643#2      ------------------------------------------------------------
                                                                                   

consensus_14643#0      TGCCCCGTCACGCCGGCCGTGCTGCCGACGCCGCAGCTGTCGCCGGCGCGCGAGGTGGTG 600
consensus_14643#5      ------------------------------------------------------------
consensus_14643#4      ------------------------------------------------------------
consensus_14643#1      ------------------------------------------------------------
consensus_14643#3      ------------------------------------------------------------
consensus_14643#2      ------------------------------------------------------------
                                                                                   

consensus_14643#0      GTGGAGATGGCCAAGGAGAAGTGGGGCGTCGACGGGTACGGCTCCATGAAGGGCCTCATC 660
consensus_14643#5      ------------------------------------------------------------
consensus_14643#4      ------------------------------------------------------------
consensus_14643#1      ------------------------------------------------------------
consensus_14643#3      ------------------------------------------------------------
consensus_14643#2      ------------------------------------------------------------
                                                                                   

consensus_14643#0      CGCCTCCGCTCCCAGGCCGCCGACGCCGGTGGCCTCCCCGGCGAGGACTCCGGATCCGGC 720
consensus_14643#5      ------------------------------------------------------------
consensus_14643#4      ------------------------------------------------------------
consensus_14643#1      ------------------------------------------------------------
consensus_14643#3      ------------------------------------------------------------
consensus_14643#2      --------------------------------------CATCGCACTTATTACTTCGTCA 22
                                                                                   

consensus_14643#0      GAGAGCGACGTGGAGGAGCACGTCGAGGTGGAGCGCCGCCTCGACCACGACCTCAGCCGC 780
consensus_14643#5      ------------------------------------------------------------
consensus_14643#4      ------------------------------------------------------------
consensus_14643#1      -----------------TCTTTTTTTTTTCATGAACTGTAATGAACAGGCAGCAGTGATC 43
consensus_14643#3      ----------------------------------CCTTTTTTTTACAGGCAGCAGTGATC 26
consensus_14643#2      GCATAATTAGCATTCACCTGACGACCACACACACACCACCACCACCGCCGCGTCGCCATT 82
                                                                                   

consensus_14643#0      TTCGAGATGGTGCAGCTCCCCGTCGCGGCCGGCGACTGCGAGGACGACGAAGACGACGAC 840
consensus_14643#5      ------------------------------------------------------------
consensus_14643#4      ------------------------------------------------------------
consensus_14643#1      TCTTTTATATCTTACAAACTCGCATACAAAGACATCTCCTTTTTGTCAGGAATTCATATT 103
consensus_14643#3      TCTTTTATATCTTACCTATTCGCATACAAAGACATCTCCTTTTTGTCAGGAATTCATATT 86
consensus_14643#2      CCACACCTGCCTCAAGCAGCGCACGCCATCGCCGTCTCCTCCTCTTCTCCGGCGTCCAAG 142
                                                                                   

consensus_14643#0      GACGGCGACGAGGCCCGCACCGCGCGGCTGGAGGAGGAGAAC-----CTGACCCTGCGCG 895
consensus_14643#5      ------------------------------------------------------------
consensus_14643#4      -------------------------------------TCTCC-----CTTTCGCTTTTCT 18
consensus_14643#1      TACAATTTCTGACGTTTCGCGGTGTATGCACAAAGCTCATGT-----TATTTATTTGCTT 158
consensus_14643#3      TACAATTTCTGACGTTTCGCGGTGTATGCACAAAGCTCATGT-----TATTTATTTGCTT 141
consensus_14643#2      AACCCCTCCCGTGCCCCGGCCATGCCGCCGCCGGAGCCGGACAAGGACAAGCCGCTGCCG 202
                                                                                   

consensus_14643#0      AGCGGCTGTTCCTGATGGAGCGCGACATGGACGACCTCCGCCGCCGCCTCCTCGCC---G 952
consensus_14643#5      ------------------------------------------------------------
consensus_14643#4      CCCCCAAATCGGATCGAACAAAATTCGTAAATTAATCTCATAAAAACACACACGAA---G 75
consensus_14643#1      AATCACACATAAGATTTAGGAAAGATAAACTTTTTTTACCTTTCCCTTGTGACAAA---A 215
consensus_14643#3      AATCACACATAAGATTTAGGAAAGATAAACTTTTTTTACCTTTCCCTTGTGACAAA---A 198
consensus_14643#2      AAGCCCAAGCCGCCCAAGCCCAAGCCCAAGCCGCCCAAGCCGGAGCCGGAGCCGAACACG 262
                                                                                   

consensus_14643#0      TGGAAACCCTCTGCCGCGACCGCCACCGCGACGGCTGCGTGGTGGACGCTGCCGGCGTCG 1012
consensus_14643#5      ------------------------------------------------------------
consensus_14643#4      CGAACGGATTCGAAGAGAGCTTAACACGAGACGGCTTCGATCGATACCGTTTTGGGGAGC 135
consensus_14643#1      CTCTCCAAACCAAACACCTCCATGTCTCCCAAAATCTGAAACCTTCAGCGATTCATCCCT 275
consensus_14643#3      CTCTCCAAACCAAACACCTCCATGTCTCCCAAAATCTGAAACCTTCAGCGATTCATCCCT 258
consensus_14643#2      CGCTCGGCGCCGGAGCGCGACCAGACGGCCGCCCCGTACGGCACGGTGCCCCCCGACCCC 322
                                                                                   

consensus_14643#0      TCGCCGAGGAGACGGTGCTCTCCG-AGAGCGTCGCCGGCGCCGAC-CTCGCC-GGAGT-- 1067
consensus_14643#5      --------AGACCGGTGCTCTCCG-AGAGCGTCGCCGGCGCCGACACTCGCCAGGAGT-- 49
consensus_14643#4      TAATCGTGTGGTTTTTGTTGGATT-GGGATTTTGG-GGTGATAATCTACGGTGAGGGTGA 193
consensus_14643#1      TCACAGAAGAGCAGCAATTCACCGTGAAATCTCGTCGGCGTTGTTGC-CGGCGCCGGCGG 334
consensus_14643#3      TCACAGAAGAGCAGCAATTCACCGTGAAATCTCGTCGGCGTTGTTGC-CGGCGCCGGCGG 317
consensus_14643#2      TTGTCCTGCGCCACCGACTGCTCGCCGGACTGCGT--GTTCTACCAC-CTGTGCCCTTCG 379
                                         *              *   *          *           

consensus_14643#0      CGG-AGAC-GACGAC-GGTGACACGGC-GGCGGACGCCAT-GAAA-----GCG-TGAAGC 1116
consensus_14643#5      CGG-AGACTGACGACAGGTGACACGGCAGGCAGACGCCATTGAAA-----GCGGTGAAAC 103
consensus_14643#4      CGG-ATATGGAAGAGTAGTCCCCAAATCCATCCA-GTGAATGACA-----CCCATGATGC 246
consensus_14643#1      CGGCGGACTGGCCGGACCTGCCGTGGCCGCCGAAGGACACCGACCTGGTCGCTCCGATGC 394
consensus_14643#3      CGGCGGACTGGCCGGACCTGCCGTGGCCGCCGAAGGACACCGACCTGGTCGCTCCGATGC 377
consensus_14643#2      CCGCCGCC--GCCGGTGGCGCCCGTGC-ATCTGAGGTCGTCGCGG-----CTGCCCACGC 431
                       * *                  *           * *     *              *  *

consensus_14643#0      A-GACA---AGGGCTT-GTAC-TAC-TCAAC-TGTAC-ATAGGTTTCC--GGGTTTCCCC 1165
consensus_14643#5      AAGACA---AGGGCTTTGTACATACATCAACATGTAC-ATAGGTTTCACAGGGTTTCCCC 159
consensus_14643#4      G-GCCA---CCGGCGCTGCAGCCGCCGCTGCAGGACC-AAATGTGGCC--GCCCTTCGCC 299
consensus_14643#1      CGGCCATCTCCAACACTTCCGAGAATTTCATCAGTCG-AGCGATCTTGGCGAGGCCCATC 453
consensus_14643#3      CGGCCATCTCCAACACTTCCGAGAATTTCATCAGTCG-AGCGATCTTGGCGAGGCCCATC 436
consensus_14643#2      CGCTCA----TCGCGCTGTCGGCGTCGCTGCTCGGCGTGTCGGTGGTGCTGCTCGTCGCG 487
                           **       *                   *         *      *     *   

consensus_14643#0      T-GTGCAGATGTTGA----TGTGAAGAGTAGGCAGAAGCAGCTTTAGCTTAGAAATTACT 1220
consensus_14643#5      T-GTGCAGATGTTGA----TGTGAAGAGTAGGCAGAAGCAGCTTTAGCTTAGAAATTACT 214
consensus_14643#4      G-CCGCCGGCGGTGGAGCCCGTGCATCTGAGGTCGTCGCGGC--TGCCCACGCCGCTCAT 356
consensus_14643#1      TCGCCCATGCGCCCA---CTGTTCGACGCCGGCGACCGGAGCGAGACCTCCGGCCATGGC 510
consensus_14643#3      TCGCCCATGCGCCCA---CTGTTCGACGCCGGCGACCGGAGCGAGACCTCCGGCCATGGC 493
consensus_14643#2      TTGCTGGTGTGTCGG--CTTATGAGGGGGAGGGGGAGGAGG---GACCTCCGGCCATGGC 542
                                 *          *        **     *  *      *   *    *   

consensus_14643#0      CTTCTTCTTTGCATC---CTTCCTGTGGTT----TAATCTTGATTTTTGTTA--TTACTT 1271
consensus_14643#5      CTTCTTCTTTGCATCACATTCACTGTGGTT----TAATCTTGATTTTTGTTA--TTACTT 268
consensus_14643#4      CGCGCTGTCGGCGTCGC-TGCTCGGCGTGT----CGGTGGTGCTGCTCGTCGCGTTGCTG 411
consensus_14643#1      CGCCTCGGCAGCGTCACCATCGACGCGGCTCGCCTGACGCCGCGCTCCGGCGAGCCCTGG 570
consensus_14643#3      CGCCTCGGCAGCGTCACCATCGACGCGGCTCGCCTGACGCCGCGCTCCGGCGAGCCCTGG 553
consensus_14643#2      CGCCTCGGCAGCGTCACCATCGACGCGGCTCGCCTGACGCCGCGCTCCGGCGAGCCCTGG 602
                       *         ** **         * *  *           *      *           

consensus_14643#0      GTTTAGCAGCAGCTTGATCATCTCTTTGTAGTACTAGTTCGGTTCCATTTCTTCTTGTAG 1331
consensus_14643#5      GTTTAGCAAAAAAAAA-------------------------------------------- 284
consensus_14643#4      GTGTGTCGGCTTATGAGGGG---------------------------------------- 431
consensus_14643#1      AGCTCTCCTCTGTCGGCTTCGGCGGCAGCTGCGTTGCGCGGGTTCGGCGCGGGCGCGCCG 630
consensus_14643#3      AGCTCTCCTCTGTCGGCTTCGGCGGCAGCTGCGTTGCGCGGGTTCGGCGCGGGCGCGCCG 613
consensus_14643#2      AGCTCTCCTCTGTCGGCTTCGGCGGCAGCTGCGTTGCGCGGGTTCGGCGCGGGCGCGCCG 662
                          *  *                                                     

consensus_14643#0      AATCAAATCAGCCAATGGATGATGATGATGATGAAATTGGGTAGGCAGGCAAGAACACAA 1391
consensus_14643#5      ------------------------------------------------------------
consensus_14643#4      ------------------------------------------------------------
consensus_14643#1      CCGGGAACGGCCGCGGCGGCGCCCGGCGCGGCGTTGGCCGCCGCCGCCGCGGCGGCGGCG 690
consensus_14643#3      CCGGGAACGGCCGCGGCGGCGCCCGGCGCGGCGTTGGCCGCCGCCGCCGCGGCGGCGGCG 673
consensus_14643#2      CCGGGAACGGCCGCGGCGGCGCCCGGCGCGGCGTTGGCCG-------------------- 702
                                                                                   

consensus_14643#0      GATGTGGGTGTTCTTCTTCTGCTCCTGTAGATCCCTCATCAACTACTCTCCTAGTCTCCT 1451
consensus_14643#5      ------------------------------------------------------------
consensus_14643#4      ------------------------------------------------------------
consensus_14643#1      GCGGACTTGTCCCTGAT------------------------------------------- 707
consensus_14643#3      GCGGACTTGTCG------------------------------------------------ 685
consensus_14643#2      ------------------------------------------------------------
                                                                                   

consensus_14643#0      AGATAGATAGACTATTATCTTAGAGTATGATGTTAGTACCAAAAGATATTCAGTAACCTG 1511
consensus_14643#5      ------------------------------------------------------------
consensus_14643#4      ------------------------------------------------------------
consensus_14643#1      ------------------------------------------------------------
consensus_14643#3      ------------------------------------------------------------
consensus_14643#2      ------------------------------------------------------------
                                                                                   

consensus_14643#0      CTCGGTGTATGCTATGAATTTCAAATCCAAAGTGTTTGTTTAGTTGTTCAAAAAAAAAGA 1571
consensus_14643#5      ------------------------------------------------------------
consensus_14643#4      ------------------------------------------------------------
consensus_14643#1      ------------------------------------------------------------
consensus_14643#3      ------------------------------------------------------------
consensus_14643#2      ------------------------------------------------------------
                                                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)