These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14656#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1947 fasta sequence [AAAAAAACAAAATAAAAAAAAGCCCACAAAAAAAAAAGAAAAAAAAAGAGAGAGAGAAGAGAAGAAAAAGTCGTATAAAGCCGCCGCGGCGTCGACGTCGACGCCGTCGCCTCCTCCTCCCCACCAAATTCCTCCTCCG-ATTCGATCCTCTCCTCTCCTCCATCGCCGCCGCCGACGCCCGCCGCCCGCCTCCGACCCCCTCCTGCTCGGCGTCAGCATTCTTGGGCGGGTTTCGGTTTCTTGGGGTCGTCGTCGTAGCGGCCACCGAGAGGGGATCAAGAAGCTGAGGATCGCGGTGGGGCAACGAGGATTGGAGGCGCGTCTGCCCTGATCACGGCGCATTTTATGGGTGAAGAGGCTCCGGAGTTTCGTGTCGAGAGCGTCGCCTTGGAATCCAAGGACTGCCTGCAGAATGCCATAGATATAGGCGATAAGACGTATGTTATCAGCAGATCAGATGACCCCAAGTCATCGATTACCATCAAAATTTTGGACAAACTAACTCAGACTTGGGTTGTACCTACAGTACTTGGGGCACCTCCAAATCCAACCAGCTCACACTCAGCGGTTCTCGTAAACAATGAGAAGATACTGATTATTGAGAAGGGTGTTCCCTTGAATGATTCTATCTGGTTCCTTGAGGTAGACACTCCTTTTGTTAAGCAGCAGAGCAAAATTAAGGGCACAG-TTGTTGTTGCATGGAGCAAGGGAGTAATTGGTGAGGGCCAAAAGCCAATTGTGATTAGCGGGCCTTCTGGTGTTGGTAAAGGGACATTAATTGCAAAATTAATGAAAGAATATCCATCAAAGTTTGGATTTTCTGTTAGCCACACCACAAGAGCTCCAAGGGAGAAAGAAATAGATGGAGTTCATTACCACTTCACAGAACG-AAGCAAGATTGAGGAAGAGATAAGTGAGGGCAAATTTCTTGAGTTTGCTCATGTTCATGGAAATGTCTATGGCACTAGCGTTGAAGCAGTTGAATCTGTTACTGATGAGGGGAAGAGGTGTATTCTCGACATTGATGTCCAAGGAGCTCGTTCTGTGAGGGCTTCTTCTCTTGAAGCAATATTCATCTTTGTATGCCCTCCATCGTTCGAGGAACTAGAGAAGCGCCTTCGGGCACGGGGAACTGAAACAGAGGAGCAAATCCAGAAGCGACTGAGGAATGCTCGTGCGGAGCTTGACCAGTCCAATTCACCAGGTCTTTTCGATCATCTTTTGGTAAATGATGACCTTGAAGCTTGTTATGAAAATTTGAAGAAGTTGCTTTCTTTGGATGATGACCACGAAGATTCAAATGATTCTTTCATCAAGGACGGGAAAGAAACTGCATGTTACTCAATCCTGTCCAAAACAAACTCAGAAATTTTGTTGCAATCTGAGACTAACGAAGCAGAGAAAGGAA-CCAC-AA-ACTTGTTATCGCTCGACTT---GTCTCTCTCAGGAGGTGCTCCTGGACGAACAAGGGGCCTCAAGATATCCCCGGTTAACTAGATAACTCAAAACATTGTTGCTGATGGCATTGCAGAAGCACTGACGAGAAACTTTTGATCAACCTGCTTGAGATAACAGATTCAGAAACACCCTAGGACAAAGGAAAT-AAAAAAAACATGGAATTCATTTCCATTTGTTATTTGTTTGCCGGAGAGGCATCAGCTACTAGGTTCATCATACCTGAACTAGGTGAAATCATAGTGAGGAATTGTACCGTATCATTGAGGAATTGTTTGCTTCATTGTTCTTGAGAGG-TTTTTTTGTTCGTTGAACGGAGTACAATGAGGGCTCCTTTATCAGTGAAGTAAAAGAATTCATGTAGTCCTATAAACATTAATAGTTAATCCATTTGCTGGATTATGCTGTGCGTCCATCCTGATTCTCAAGCTAATTGTCTATTAGTAATAGGGAAGCTAATACAAGCAAATTGTTAGTATATCAAACTAAAAAGGA] [+] EMBL AK071160 [AAAAAAACAAAATAAAAAAAAGCCCACAAAAAAAAAAGAAAAAAAAAGAGAGAGAGAAGAGAAGAAAAAGTCGTATAAAGCCGCCGCGGCGTCGACGTCGACGCCGTCGCCTCCTCCTCCCCACCAAATTCCTCCTCCG ATTCGATCCTCTCCTCTCCTCCATCGCCGCCGCCGACGCCCGCCGCCCGCCTCCGACCCCCTCCTGCTCGGCGTCAGCATTCTTGGGCGGGTTTCGGTTTCTTGGGGTCGTCGTCGTAGCGGCCACCGAGAGGGGATCAAGAAGCTGAGGATCGCGGTGGGGCAACGAGGATTGGAGGCGCGTCTGCCCTGATCACGGCGCATTTTATGGGTGAAGAGGCTCCGGAGTTTCGTGTCGAGAGCGTCGCCTTGGAATCCAAGGACTGCCTGCAGAATGCCATAGATATAGGCGATAAGACGTATGTTATCAGCAGATCAGATGACCCCAAGTCATCGATTACCATCAAAATTTTGGACAAACTAACTCAGACTTGGGTTGTACCTACAGTACTTGGGGCACCTCCAAATCCAACCAGCTCACACTCAGCGGTTCTCGTAAACAATGAGAAGATACTGATTATTGAGAAGGGTGTTCCCTTGAATGATTCTATCTGGTTCCTTGAGGTAGACACTCCTTTTGTTAAGCAGCAGAGCAAAATTAAGGGCACAG TTGTTGTTGCATGGAGCAAGGGAGTAATTGGTGAGGGCCAAAAGCCAATTGTGATTAGCGGGCCTTCTGGTGTTGGTAAAGGGACATTAATTGCAAAATTAATGAAAGAATATCCATCAAAGTTTGGATTTTCTGTTAGCCACACCACAAGAGCTCCAAGGGAGAAAGAAATAGATGGAGTTCATTACCACTTCACAGAACG AAGCAAGATTGAGGAAGAGATAAGTGAGGGCAAATTTATTGAGTTTGCTCATGTTCATGGAAATGTCTATGGCACTAGCGTTGAAGCAGTTGAATCTGTTACTGATGAGGGGAAGAGGTGTATTCTCGACATTGATGTCCAAGGAGCTCGTTCTGTGAGGGCTTCTTCTCTTGAAGCAATATTCATCTTTGTATGCCCTCCATCGTTCGAGGAACTAGAGAAGCGCCTTCGGGCACGGGGAACTGAAACAGAGGAGCAAATCCAGAAGCGACTGAGGAATGCTCGTGCAGAGCTTGACCAGTCCAATTCACCAGGTCTTTTCGATCATCTTTTGGTAAATGATGACCTTGAAGCTTGTTATGAAAATTTGAAGAAGTTGCTTTCTTTGGATGATGACCACGAAGATTCAAATGATTCTTTCATCAAGGACGGGAAAGAAACTGCATGTTACTCAATCCTGTCCAAAACAAACTCAGAAATTTTGTTGCAATCTGAGACTAACGAAGCAGAGAAAGGAA CCAC AA ACTTGTTATCGCTCGACTT GTCTCTCTCAGGAGGTGCTCCTGGACGAACAAGGGGCCTCAAGATATCCCCGGTTAACTAGATAACTCAAAACATTGTTGCTGATGGCATTGCAGAAGCACTGACGAGAAACTTTTGATCAACCTGCTTGAGATAACAGATTCAGAAACACCCTAGGACAAAGGAAAT AAAAAAAACATGGAATTCATTTCCATTTGTTATTTGTTTGCCGGAGAGGCATCAGCTACTAGGTTCATCATACCTGAACTAGGTGAAATCATAGTGAGGAATTGTACCGTATCATTGAGGAATTGTTTGCTTCATTGTTCTTGAGAGG TTTTTTTGTTCGTTGAACGGAGTACAATGAGGGCTCCTTTATCAGTGAAGTAAAAGAATTC ] [+] EMBL CB628683 [ CTCCCCCT ATTCGATCCTCTCCTCTCCTCCATCGCCGCCGCCGACGCCCGCCGCCCGCCTCCGACCCCCTCCTGCTCGGCGTCAGCATTCTTGGGCGGGTTTCGGTTTCTTGGGGTCGTCGTCGTAGCGGCCACCGAGAGGGGATCAAGAAGCTGAGGATCGCGGTGGGGCAACGAGGATTGGAGGCGCGTCTGCCCTGATCACGGCGCATTTTATGGGTGAAGAGGCTCCGGAGTTTCGTGTCGAGAGCGTCGCCTTGGAATCCAAGGACTGCCTGCAGAATGCCATAGATATAGGCAATAAGACGTATGTTATCAGCAGATCAGATGACCCCAAGTCATCGATTACCATCAAAATTTTGGACAAACTAACTCAGACTTGGGTTGTACCTACAGTACTTGGGGCACCTCCAAATCCAACCAGCTCACACTCAGCGGTTCTCGTAAACAATGAGAAGATACTGATTATTGAGAAGGGTGTTCCCTTGAATGATTCTATCTGGTTCCTTGAGGTAGACACTCCTTTTGTTAAGCAGCAGAGCAAAATTAAGGGCACAG TTGTTGTTGCATGGAGCAAGGGAGTAATTGGTGAGGGCCAAAAGCCAATTGTGATTAGCGGGCCTTCTGGTGTTGGTAAAGGGACATTAATTGCAAAATTAATGAAAGAATATCCATCAAAGTTTGGATTTTCTGTTAGCCACACCACAAGAGCTCCAAGGGAGAAAGAAATAGATGGAGTTCATTACCACTTCACAGAACGAAAGC AGATTGAGGAAGAGATAAGTGAGGGC ] [+] EMBL CB618260 [ TCCTCCGCATTCGATCCTCTCCTCTCCTCCATCGCCGCCGCCGACGCCCGCCGCCCGCCTCCGACCCCCTCCTGCTCGGCGTCAGCATTCTTGGGCGGGTTTCGGTTTCTTGGGGTCGTCGTCGTAGCGGCCACCGAGAGGGGATCAAGAAGCTGAGGATCGCGGTGGGGCAACGAGGATTGGAGGCGCGTCTGCCCTGATCACGGCGCATTTTATGGGTGAAGAGGCTCCGGAGTTTCGTGTCGAGAGCGTCGCCTTGGAATCCAAGGACTGCCTGCAGAATGCCATAGATATAGGCAATAAGACGTATGTTATCAGCAGATCAGATGACCCCAAGTCATCGATTACCATCAAAATTTTGGACAAACTAACTCAGACTTGGGTTGTACCTACAGTACTTGGGGCACCTCCAAATCCAACCAGCTCACACTCAGCGGTTCTCGTAAACAATGAGAAGATACTGATTATTGAGAAGGGTGTTCCCTTGAATGATTCTATCTGGTTCCTTGAGGTAGACACTCCTTTTGTTAAGCAGCAGAGCAAAATTAAGGGCACAG TTGTTGTTGCATGGAGCAAGGGAGTAATTGGTGAGGGCCAAAAGCCAATTGTGATTAGCGGGCCTTCTGGTGTTGGTAAAGGGACATTAATTGCAAAATTAATGAAAGAATATCCATCAAAGTTTGGATTTTCTGTTAGCCACACCACAAGAGCTCCAAGGGAGAAAGAAATAGATGGAGTTCATTACCACTTCACAGAACG AAGCAAGATTGAGGAAGAGATAAGTGAGGGCAAATTTCTTGAGTTTGCTCATGTTCATGGAAATGTCTATGGCACTAGCATTGAAGCAGTTGAATCTGTTA ] [+] EMBL CB639951 [ TCCG ATTCGATCCTCTCCTCTCCTCCATCGCCGCCGCCGACGCCCGCCGCCCGCCTCCGACCCCCTCCTGCTCGGCGTCAGCATTCTTGGGCGGGTTTCGGTTTCTTGGGGTCGTCGTCGTAGCGGCCACCGAGAGGGGATCAAGAAGCTGAGGATCGCGGTGGGGCAACGAGGATTGGAGGCGCGTCTGCCCTGATCACGGCGCATTTTATGGGTGAAGAGGCTCCGGAGTTTCGTGTCGAGAGCGTCGCCTTGGAATCCAAGGACTGCCTGCAGAATGCCATAGATATAGGCGATAAGACGTATGTTATCAGCAGATCAGATGACCCCAAGTCATCGATTACCATCAAAATTTTGGACAAACTAACTCAa ] [+] EMBL CB620357 [ GATCCCCTCCACTCCTCCATCGCCGCCGCCGACGCCCGCCGCCCGCCTCCGACCCCCTCCTGCTCGGCGTCAGCATTCTTGGGCGGGTTTCGGTTTCTTGGGGTCGTCGTCGTAGCGGCCACCGAGAGGGGATCAAGAAGCTGAGGATCGCGGTGGGGCAACGAGGATTGGAGGCGCGTCTGCCCTGATCACGGCGCATTTTATGGGTGAAGAGGCTCCGGAGTTTCGTGTCGAGAGCGTCGCCTTGGAATCCAAGGACTGCCTGCAGAATGCCATAGATATAGGCAATAAGACGTATGTTATCAGCAGATCAGATGACCCCAAGTCATCGATTACCATCAAAATTTTGGACAAACTAACTCAGACTTGGGTTGTACCTACAGTACTTGGGGCACCTCCAAATCCAACCAGCTCACACTCAGCGGTTCTCGTAAACAATGAGAAGATACTGATTATTGAGAAGGGTGTTCCCTTGAATGATTCTATCTGGTTCCTTGAGGTAGACACTCCTTTTGTTAAGCAGCAGAGCAAAATTAAGGGCACAG TTGTTGTTGCATGGAGCAAGGGAGTAATTGGTGAGGGCCAAAAGCCAATTGTGATTAGCGGGCCTTCTGGTGTTGGTAAAGGGACATTAATTGCAAAATTAATGAAAGAATATCCATCAAAGTTTGGATTTTCTGTTAGCCACACCACAAGAGCTCCAAGGGAGAAAGAAATAGATGGAGTTCATTACCACTTCACAGAACG AAGCAAGATTGAGGAAGAGATAAGTGA ] [+] EMBL CB639965 [ CTCCTCTCCTCCATCGCCGCCGCCGACGCCCGCCGCCCGCCTCCGACCCCCTCCTGCTCGGCGTCAGCATTCTTGGGCGGGTTTCGGTTTCTTGGGGTCGTCGTCGTAGCGGCCACCGAGAGGGGATCAAGAAGCTGAGGATCGCGGTGGGGCAACGAGGATTGGAGGCGCGTCTGCCCTGATCACGGCGCATTTTATGGGTGAAGAGGCTCCGGAGTTTCGTGTCGAGAGCGTCGCCTTGGAATCCAAGGACTGCCTGCAGAATGCCATAGATATAGGCGATAAGACGTATGTTATCAGCAGATCAGATGACCCCAAGTCATCGATTACCATCAAAATTTTGGACAAACTAACTCAGACTTGGGTTGTACCTACAGTACTTGGGGCACCTCCAAATCCAACCAGCTCACACTCAGCGGTTCTCGTAAACAATGAGAAGATACTGATTATTGAGAAGGGTGTTCCCTTGAATGATTCTATCTGGTTCCTTGAGGTAGACACTCCTTTTGTTAAGCAGCAGAGCAAAATTAAGGGCACAG TT ] [+] EMBL CF324199 [ CTGAGGATCGCGGTGGGGCAACGAGGATTGGAGGCGCGTCTGCCCTGATCACGGCGCATTTTATGGGTGAAGAGGCTCCGGAGTTTCGTGTCGAGAGCGTCGCCTTGGAATCCAAGGACTGCCTGCAGAATGCCATAGATATAGGCGATAAGACGTATGTTATCAGCAGATCAGATGACCCCAAGTCATCGATTACCATCAAAATTTTGGACAAACTAACTCAGACTTGGGTTGTACCTACAGTACTTGGGGCACCTCCAAATCCAACCAGCTCACACTCAGCGGTTCTCGTAAACAATGAGAAGATACTGATTATTGAGAAGGGTGTTCCCTTGAATGATTCTATCTGGTTCCTTGAGGTAGACACTCCTTTTGTTAAGCAGCAGAGCAAAATTAAGGGCACAGNTTGTTGTTGCATGGAGCAAGGGAGTAATTGGTGAGGGCCAAAAGCCAATTGTGATTAGCGGGCCTTCTGGTGTTGGTAAAGGGACATTAATTGCAAAA ] [+] EMBL CB000055 [ GAGAAGGGTGTTCCCTTGAATGATTCTATCTGCCTTCTTGAGGTAGACACTCCTTTTGTTAAGCAGCAGAGCAAAATTAAGGGCACAG TTGTTGTTGCATGGAGCAAGGGAGTAATTGGTGAGGGCCAAAAGCCAATTGTGATTAGCGGGCCTTCTGGTGTTGGTAAAGGGACATTAATTGCAAAATTAATGAAAGAATATCCATCAAAGTTTGGATTTTCTGTTAGCCACACCACAAGAGCTCCAAGGGAGAAAGAAATAGATGGAATTCATTACCACTTCACAGAACG AAGCAAGATTGAGGAAGAGATAAGTGAGGGCAAATTTCTTGATTTTGCTCATGTTCATGGAAATGTCTATGGCACTAGCGTTGAAGCAGTTGAATCTGTTACTGATGAGGGGAAGAGGTGTATTCTCGACATTGATGTCCAAGGAGCTCGTTCTGTGAGGGCTTCTTCTCTTGAAGCAATATTCATCTTTGTATGCCCTCCATCGTTCGAGGAACTAGAGAAGCGCCTTCGGCCACGGGGAACTGAAACAGAGGACGAAATCCACAAGCGACTGATGAATGCTCGTGCGGAGCTTGACCA ] [+] EMBL CB000489 [ TTCTGTTAGCCACACCACAAGAGCTCCAAGGGCGATAGAAATAGATGGAATTCATTACCACTTCACAGAACG AAGCAAGATTGAGGAAGAGATAAGTGAGGGCAAATTTCTTGAGTTTGCTCATGTTCATGGAAATGTCTATGGCACTAGCGTTGAAGCAGTTGAATCTGTTACTGATGAGGGGAAGAGGTGTATTCTCGACATTGATGTCCAAGGAGCTCGTTCTGTGAGGGCTTCTTCTCTTGAAGCAATATTCATCTTTGTATGCCCTCCATCGTTCGAGGAACTAGAGAAGCGCCTTCGGGCACGGGGAACTGAAACAGAGGAGCAAATCCAGAAGCGACTGAGGAATGCTCGTGCGGAGCTTGACCAGTCCAATTCACCAGGTCTTTTCGATCATCTTTTGGTAAATGATGACCTTGAAGCTTGTTATGAAAATTTGAAGAAGTTGCTTTCTTTGGATGATGACCACGAAGATTCAAATGATTCTTTCATCAAGGACGGGAAAGAAACTGCATGTTACTCAATCCTGTCCAAAACAAACTCAGAAATTTTGTTGCAATCTGAGACTAACGAAGCAGAGAAAGGAA CCAC AA ACTTGTTATCGCTCGACTT GTCTCTCTCAGGAGGTGCTCCTGGACGAACAAGGGGCCTCAAGATATCCCCGGTTAACTAGATAACTCAAAACATTGTTGCTGATGGCATTGCAGAAGCACTGACGAGAAACTTTTGATCAACCTGCTTGAGATAACAGATTCAGAAACACCCTAGGACAAAGGAAATAAAAAAAAACATGGAATTCATTTCCATTTGTTATTTGTTTGCCGGAGAGGCATCAGCTACTAGGTTCAT ] [-] EMBL CB657371 [ TCCATCGTTCGAGGAACTAGAGAAGCGCCTTCGGGCACGGGGAACTGAAACAGAGGAGCAAATCCAGAAGCGACTGAGGAATGCTCGTGCAGAGCTTGACCAGTCCAATTCACCAGGTCTTTTCGATCATCTTTTGGTAAATGATGACCTTGAAGCTTGTTATGAAAATTTGAAGAAGTTGCTTTCTTTGGATGATGACCACGAAGATTCAAATGATTCTTTCATCAAGGACGGGAAAGAAACTGCATGTTACTCAATCCTGTCCAAAACAAACTCAGAAATTTTGTTGCAATCTGAGACTAACGAAGCAGAGAAAGGAA CCAC AA ACTTGTTATCGCTCGACTT GTCTCTCTCAGGAGGTGCTCCTGGACGAACAAGGGGCCTCAAGATATCCCCGGTTAACTAGATAACTCAAAACATTGTTGCTGATGGCATTGCAGAAGCACTGACGAGAAACTTTTGATCAACCTGCTTGAGATAACAGATTCAGAAACACCCTAGGACAAAGGAAAT AAAAAAAACATGGAATTCATTTCCATTTGTTATTTGTTTGCCGGAGAGGCATCAGCTACTAGGTTCATCATACCTGAACTAGGTGAAATCATAGTGAGGAATTGTACCGTATCATTGAGGAATTGTTTGCTTCATTGTTCTTGAGAGG TTTTTTTGTTCGTTGAACGGAGTACAATGAGGGCTCCTTTATCAGTGAAGTAAAAGAATTCATGTAGTCCTATAAACATTAATAGTTAATCCATTTGCTGGATTATGCTGTGCGT ] [-] EMBL CB620358 [ AGAGGAGCAAATCCAGAAGCGACTGAGGAATGCTCGTGCGGAGCTTGACCAGTCCAATTCACCAGGTCTTTTCGATCATCTTTTGGTAAATGATGACCTTGAAGCTTGTTATGAAAATTTGAAGAAGTTGCTTTCTTTGGATGATGACCACGAAGATTCAAATGATTCTTTCATCAAGGACGGGAAAGAAACTGCATGTTACTCAATCCTGTCCAAAACAAACTCAGAAATTTTGTTGCAATCTGAGACTAACGAAGCAGAGAAAGGAA CCAC AA ACTTGATATCGCTCGACTTGTCGTCTCTCTCAGGAGGTGCTCCTGGACGAACAAGGGGCCTCAAGATATCCCCGTTTAACTAGATAACTCAAAACATTGTTGCTGATGGCATTGCAGAAGCACTGACGAGAAACTTTTGATCAACCTGCTTGAGATAACAGATTCAGAAACACCCTAGGACAAAGGAAAT AAAAAAACATGGAATTCATTTCCATTTGTTATTTGTTTGCCGGAGAGGCATCAGCTACTAGGTTCATCATACCTGAACTAGGTGAAATCATAGTGAGGAATTGTACCGTATCATTGAGGAATTGTTTGCTTCATTGTTCTTGAGAGG TTTTTTTGTTCGTTGAACGGAGTACAATGAGGGCTCCTTTATCAGTGAAGTAAAAGAATTCATGTAGTCCTATAAACATTAATAGTTAATCCATTTGCTGGATTATGCTGTGCGTCCATCCTGATTCTCAAGCTAATTGTCTATTAGTAATAGGGAAGCTAATACAAGCAAATTGTTAGTATATCAAACTAAAAAGGA] [-] EMBL CB639280 [ GACCTTGAAGCTTGTTATGAAAATTTGAAGAAGTTGCTTTCTTTGGATGATGACCACGAAGATTCAAATGATTCTTTCATCAAGGACGGGAAAGAAACTGCATGTTACTCAATCCTGTCCAAAACAAACTCAGAAATTTTGTTGCAATCTGAGACTAACGAAGCAGAGAAAGGAA CCAC AA ACTTGTTATCGCTCGACTT GTCTCTCTCAGGAGGTGCTCCTGGACGAACAAGGGGCCTCAAGATATCCCCGGTTAACTAGATAACTCAAAACATTGTTGCTGATGGCATTGCAGAAGCACTGACGAGAAACTTTTGATCAACCTGCTTGAGATAACAGATTCAGAAACACCCTAGGACAAAGGAAAT AAAAAAAACATGGAATTCATTTCCATTTGTTATTTGTTTGCCGGAGAGGCATCAGCTACTAGGTTCATCATACCTGAACTAGGTGAAATCATAGTGAGGAATTGTACCGTATCATTGAGGAATTGTTTGCTTCATTGTTCTTGAGAGG TTTTTTTGTTCGTTGAACGGAGTACAATGAGGGCTCCTTTATCAGTGAAGTAAAAGAATTCATGTAGTCCTATAAACATTAATAGTTAATCCATT ] [-] EMBL CF324307 [ TTCTTTCATCAAGGACGGGAAAGAAACTGCATGTTACTCAATCCTGTCCAAAACAAACTCAGAAATTTTGTTGCAATCTGAGACTAACGAAGCAGAGAAAGGAA CCAC AANACTTGTTATCGCTCGACTT GTCTCTCTCAGGAGGTGCTCCTGGACGAACAAGGGGCCTCAAGATATCCCCGGTTAACTAGATAACTCAAAACATTGTTGCTGATGGCATTGCAGAAGCACTGACGAGAAACTTTTGATCAACCTGCTTGAGATAACAGATTCAGAAACACCCTAGGACAAAGGAAAT AAAAAAAACATGGAATTCATTTCCATTTGTTATTTGTTTGCCGGAGAGGCATCAGCTACTAGGTTCATCATACCTGAACTAGGTGAAATCATAGTGAGGAATTGTACCGTATCATTGAGGAATTGTTTGCTTCATTGTTCTTGAGAGG TTTTTTTGTTCGTTGAACGGAGTACAATGAGGGCTCCTTTATCAGTGAAGTAAAAGAATTCA ] [-] EMBL CF303001 [ CAGAAATTTTGTTGCAATCTGAGACTAACGAAGCAGAGAAAGGAACCCACAAA ACTTGTTATCGCTCGACTT GTCTCTCTCAGGAGGTGCTCCTGGACGAACAAGGGGCCTCAAGATATCCCCGGTTAACTAGATAACTCAAAACATTGTTGCTGATGGCATTGCAGAAGCACTGACGAGAAACTTTTGATCAACCTGCTTGAGATAACAGATTCAGAAACACCCTAGGACAAAGGAAAT AAAAAAAACATGGAATTCATTTCCATTTGTTATTTGTTTGCCGGAGAGGCATCAGCTACTAGGTTCATCATACCTGAACTAGGTGAAATCATAGTGAGGAATTGTACCGTATCATTGAGGAATTGTTTGCTTCATTGTTCTTGAGAGG TTTTTTTGTTCGTTGAACGGAGTACAATGAGGGCTCCTTTATCAGTGAAGTAAAAGAATTCATGTAGTCCTATAAACATTAATAGTTAATCCATTTGCTGGAaaaaa ] [-] EMBL AA750318 [ CGTATCATTGAGGAATTGTTTGCTTCATTGTTCTTGAGAGGTTTTTTTTGTTCGTTGAACGGAGTACAATGAGGGCTCCTTTATCAGTGAAGTAAAAGAATTCATGTAGTCCTATAAACATTAATAGTTAATCCATTTGCTGGATTATG ] consensusID : consensus_14656#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 703 fasta sequence [CCAATTCACCAGGTCTTTTCGATCATCTTTTGGTAAATGATGCCCTTGAAGCTTGTTATGAAAATTTGAAGAAGTTGCTTTCTTTGGATGATGCCCACGAAGATTCAAATGATTCTTTCATCAAGGACGGGAAAGAAACTGCATGTTACTCAATCCTGTCCAAAACAAACTCAGAAATTTTGTTGCAATCTGAGACTAACGAAGCAGAGAAAGGACCCCCAAACTTGATATCGCTCGACTTGTCGTCTCTCTCAGGAGGTGCTCCTGGACGAACAAGGGGCCTCAAGATATCCCCGGTTAACTAGATAACTCAAAACATTGTTGCTGATGGCATTGCAGAAGCACTGACGAGAAACTTTTGATCACCCTGCTTGAGATAACAGATTCAGAAACCCCCTAGGACAAAGGAAATAAAAAAACATGGAATTCATTTCCATTTGTTATTTGTTTGCCGGAGAGGCATCAGCTACTAGGTTCATCATCCCTGAATTAGGTGAAATCATAGTGAGGAATTGTCCCGTATCATTGAGGAATTGTTTGCTTCATTGTTCTTGAGAGGTTTTTTTGTTCGTTGAACGGAGTACAATGAGGGCTCCTTTATCAGTGAAGTAAAAGAATTCATGTAGTCCTATAACCATTAATAGTTAATCCATTTGTTAAGGTATGCTGTGCGTCAAAAAAAAAAAAAAAAAAACTTAAAGGA] [-] EMBL CB618261 [CCAATTCACCAGGTCTTTTCGATCATCTTTTGGTAAATGATGCCCTTGAAGCTTGTTATGAAAATTTGAAGAAGTTGCTTTCTTTGGATGATGCCCACGAAGATTCAAATGATTCTTTCATCAAGGACGGGAAAGAAACTGCATGTTACTCAATCCTGTCCAAAACAAACTCAGAAATTTTGTTGCAATCTGAGACTAACGAAGCAGAGAAAGGACCCCCAAACTTGATATCGCTCGACTTGTCGTCTCTCTCAGGAGGTGCTCCTGGACGAACAAGGGGCCTCAAGATATCCCCGGTTAACTAGATAACTCAAAACATTGTTGCTGATGGCATTGCAGAAGCACTGACGAGAAACTTTTGATCACCCTGCTTGAGATAACAGATTCAGAAACCCCCTAGGACAAAGGAAATAAAAAAACATGGAATTCATTTCCATTTGTTATTTGTTTGCCGGAGAGGCATCAGCTACTAGGTTCATCATCCCTGAATTAGGTGAAATCATAGTGAGGAATTGTCCCGTATCATTGAGGAATTGTTTGCTTCATTGTTCTTGAGAGGTTTTTTTGTTCGTTGAACGGAGTACAATGAGGGCTCCTTTATCAGTGAAGTAAAAGAATTCATGTAGTCCTATAACCATTAATAGTTAATCCATTTGTTAAGGTATGCTGTGCGTCAAAAAAAAAAAAAAAAAAACTTAAAGGA] consensusID : consensus_14656#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 210 fasta sequence [AGCATAATCCAGCAAAGGGATTAACTATTAATGTTTATAGGACTACATTGTGAGGTGAGACTATACTCACCATTAATGTGNCGGTTGGCGNCTCACGTGGCCCGGCTATTCCAGGTCGGGNACAACCTGGTCGGTGCCAGGCGTGGCATTAAGTGAATCGGGCCAACGGCGCGGGGGAGAGGGCGGTTTGGCGTATTGGGGCGCTCTTCC] [+] EMBL CB965228 [AGCATAATCCAGCAAAGGGATTAACTATTAATGTTTATAGGACTACATTGTGAGGTGAGACTATACTCACCATTAATGTGNCGGTTGGCGNCTCACGTGGCCCGGCTATTCCAGGTCGGGNACAACCTGGTCGGTGCCAGGCGTGGCATTAAGTGAATCGGGCCAACGGCGCGGGGGAGAGGGCGGTTTGGCGTATTGGGGCGCTCTTCC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14656#0 AAAAAAACAAAATAAAAAAAAGCCCACAAAAAAAAAAGAAAAAAAAAGAGAGAGAGAAGA 60 consensus_14656#1 ------------------------------------------------------------ consensus_14656#2 ------------------------------------------------------------ consensus_14656#0 GAAGAAAAAGTCGTATAAAGCCGCCGCGGCGTCGACGTCGACGCCGTCGCCTCCTCCTCC 120 consensus_14656#1 ------------------------------------------------------------ consensus_14656#2 ------------------------------------------------------------ consensus_14656#0 CCACCAAATTCCTCCTCCGATTCGATCCTCTCCTCTCCTCCATCGCCGCCGCCGACGCCC 180 consensus_14656#1 ------------------------------------------------------------ consensus_14656#2 ------------------------------------------------------------ consensus_14656#0 GCCGCCCGCCTCCGACCCCCTCCTGCTCGGCGTCAGCATTCTTGGGCGGGTTTCGGTTTC 240 consensus_14656#1 ------------------------------------------------------------ consensus_14656#2 ------------------------------------------------------------ consensus_14656#0 TTGGGGTCGTCGTCGTAGCGGCCACCGAGAGGGGATCAAGAAGCTGAGGATCGCGGTGGG 300 consensus_14656#1 ------------------------------------------------------------ consensus_14656#2 ------------------------------------------------------------ consensus_14656#0 GCAACGAGGATTGGAGGCGCGTCTGCCCTGATCACGGCGCATTTTATGGGTGAAGAGGCT 360 consensus_14656#1 ------------------------------------------------------------ consensus_14656#2 ------------------------------------------------------------ consensus_14656#0 CCGGAGTTTCGTGTCGAGAGCGTCGCCTTGGAATCCAAGGACTGCCTGCAGAATGCCATA 420 consensus_14656#1 ------------------------------------------------------------ consensus_14656#2 ------------------------------------------------------------ consensus_14656#0 GATATAGGCGATAAGACGTATGTTATCAGCAGATCAGATGACCCCAAGTCATCGATTACC 480 consensus_14656#1 ------------------------------------------------------------ consensus_14656#2 ------------------------------------------------------------ consensus_14656#0 ATCAAAATTTTGGACAAACTAACTCAGACTTGGGTTGTACCTACAGTACTTGGGGCACCT 540 consensus_14656#1 ------------------------------------------------------------ consensus_14656#2 ------------------------------------------------------------ consensus_14656#0 CCAAATCCAACCAGCTCACACTCAGCGGTTCTCGTAAACAATGAGAAGATACTGATTATT 600 consensus_14656#1 ------------------------------------------------------------ consensus_14656#2 ------------------------------------------------------------ consensus_14656#0 GAGAAGGGTGTTCCCTTGAATGATTCTATCTGGTTCCTTGAGGTAGACACTCCTTTTGTT 660 consensus_14656#1 ------------------------------------------------------------ consensus_14656#2 ------------------------------------------------------------ consensus_14656#0 AAGCAGCAGAGCAAAATTAAGGGCACAGTTGTTGTTGCATGGAGCAAGGGAGTAATTGGT 720 consensus_14656#1 ------------------------------------------------------------ consensus_14656#2 ------------------------------------------------------------ consensus_14656#0 GAGGGCCAAAAGCCAATTGTGATTAGCGGGCCTTCTGGTGTTGGTAAAGGGACATTAATT 780 consensus_14656#1 ------------------------------------------------------------ consensus_14656#2 ------------------------------------------------------------ consensus_14656#0 GCAAAATTAATGAAAGAATATCCATCAAAGTTTGGATTTTCTGTTAGCCACACCACAAGA 840 consensus_14656#1 ------------------------------------------------------------ consensus_14656#2 ------------------------------------------------------------ consensus_14656#0 GCTCCAAGGGAGAAAGAAATAGATGGAGTTCATTACCACTTCACAGAACGAAGCAAGATT 900 consensus_14656#1 ------------------------------------------------------------ consensus_14656#2 ------------------------------------------------------------ consensus_14656#0 GAGGAAGAGATAAGTGAGGGCAAATTTCTTGAGTTTGCTCATGTTCATGGAAATGTCTAT 960 consensus_14656#1 ------------------------------------------------------------ consensus_14656#2 ------------------------------------------------------------ consensus_14656#0 GGCACTAGCGTTGAAGCAGTTGAATCTGTTACTGATGAGGGGAAGAGGTGTATTCTCGAC 1020 consensus_14656#1 ------------------------------------------------------------ consensus_14656#2 ------------------------------------------------------------ consensus_14656#0 ATTGATGTCCAAGGAGCTCGTTCTGTGAGGGCTTCTTCTCTTGAAGCAATATTCATCTTT 1080 consensus_14656#1 ------------------------------------------------------------ consensus_14656#2 ------------------------------------------------------------ consensus_14656#0 GTATGCCCTCCATCGTTCGAGGAACTAGAGAAGCGCCTTCGGGCACGGGGAACTGAAACA 1140 consensus_14656#1 ------------------------------------------------------------ consensus_14656#2 ------------------------------------------------------------ consensus_14656#0 GAGGAGCAAATCCAGAAGCGACTGAGGAATGCTCGTGCGGAGCTTGACCAGTCCAATTCA 1200 consensus_14656#1 ----------------------------------------------------CCAATTCA 8 consensus_14656#2 ------------------------------------------------------------ consensus_14656#0 CCAGGTCTTTTCGATCATCTTTTGGTAAATGATGACCTTGAAGCTTGTTATGAAAATTTG 1260 consensus_14656#1 CCAGGTCTTTTCGATCATCTTTTGGTAAATGATGCCCTTGAAGCTTGTTATGAAAATTTG 68 consensus_14656#2 ------------------------------------------------------------ consensus_14656#0 AAGAAGTTGCTTTCTTTGGATGATGACCACGAAGATTCAAATGATTCTTTCATCAAGGAC 1320 consensus_14656#1 AAGAAGTTGCTTTCTTTGGATGATGCCCACGAAGATTCAAATGATTCTTTCATCAAGGAC 128 consensus_14656#2 ------------------------------------------------------------ consensus_14656#0 GGGAAAGAAACTGCATGTTACTCAATCCTGTCCAAAACAAACTCAGAAATTTTGTTGCAA 1380 consensus_14656#1 GGGAAAGAAACTGCATGTTACTCAATCCTGTCCAAAACAAACTCAGAAATTTTGTTGCAA 188 consensus_14656#2 ------------------------------------------------------------ consensus_14656#0 TCTGAGACTAACGAAGCAGAGAAAGGAACCACAAACTTGTTATCGCTCGACTTGTC---T 1437 consensus_14656#1 TCTGAGACTAACGAAGCAGAGAAAGGACCCCCAAACTTGATATCGCTCGACTTGTCGTCT 248 consensus_14656#2 ------------------------------------------------------------ consensus_14656#0 CTCTCAGGAGGTGCTCCTGGACGAACAAGGGGCCTCAAGATATCCCCGGTTAACTAGATA 1497 consensus_14656#1 CTCTCAGGAGGTGCTCCTGGACGAACAAGGGGCCTCAAGATATCCCCGGTTAACTAGATA 308 consensus_14656#2 ------------------------------------------------------------ consensus_14656#0 ACTCAAAACATTGTTGCTGATGGCATTGCAGAAGCACTGACGAGAAACTTTTGATCAACC 1557 consensus_14656#1 ACTCAAAACATTGTTGCTGATGGCATTGCAGAAGCACTGACGAGAAACTTTTGATCACCC 368 consensus_14656#2 ------------------------------------------------------------ consensus_14656#0 TGCTTGAGATAACAGATTCAGAAACACCCTAGGACAAAGGAAATAAAAAAAACATGGAAT 1617 consensus_14656#1 TGCTTGAGATAACAGATTCAGAAACCCCCTAGGACAAAGGAAATAAAAAAA-CATGGAAT 427 consensus_14656#2 ------------------------------------------------------------ consensus_14656#0 TCATTTCCATTTGTTATTTGTTTGCCGGAGAGGCATCAGCTACTAGGTTCATCATACCTG 1677 consensus_14656#1 TCATTTCCATTTGTTATTTGTTTGCCGGAGAGGCATCAGCTACTAGGTTCATCATCCCTG 487 consensus_14656#2 ---------------AGCATAATCCAGCAAAGGGATTAACTATTA--------ATGTTT- 36 * * * * * *** ** * *** ** ** * consensus_14656#0 AACTAGGTGAAATCATAGTGAGGAATTGTACCGTATCATTGAGGAATTGTTTGCTTCATT 1737 consensus_14656#1 AATTAGGTGAAATCATAGTGAGGAATTGTCCCGTATCATTGAGGAATTGTTTGCTTCATT 547 consensus_14656#2 -ATAGGACTACATTGTGAGGTGAGACTATACT-CACCATTAATGTGNCGGTTGGCGN--- 91 * * * ** * * * * * * * * **** * * * *** consensus_14656#0 GTTCTTGAGAGGTTTTTTTGTTCGTTGAACGGAGTACAATGAGGGCTCCTTTATCAGTGA 1797 consensus_14656#1 GTTCTTGAGAGGTTTTTTTGTTCGTTGAACGGAGTACAATGAGGGCTCCTTTATCAGTGA 607 consensus_14656#2 ---CTCACGTGGCCCGGCTATTC--CAGGTCGGGNACAACCTGGTCGGTGCCAGGCGTGG 146 ** * ** * *** * * **** ** * * *** consensus_14656#0 AGTAAAAGAATTCATGTAGTCCTATAAACATTAATAGTTAATCCATTTGCTGGATTATGC 1857 consensus_14656#1 AGTAAAAGAATTCATGTAGTCCTATAACCATTAATAGTTAATCCATTTGTTAAGGTATGC 667 consensus_14656#2 CATTAAGTGAATCGGG-----CCAACGGCGCGGGGGAGAGGGCGGTTTGGCGTATTGGGG 201 * ** * ** * * * * * **** * * consensus_14656#0 TGTGCGTCCATCCTGATTCTCAAGCTAATTGTCTATTAGTAATAGGGAAGCTAATACAAG 1917 consensus_14656#1 TGTGCGTCAAAAAAAA-----AAAAAAAAAAACTTAAAGGA------------------- 703 consensus_14656#2 CGCTCTTCC--------------------------------------------------- 210 * * ** consensus_14656#0 CAAATTGTTAGTATATCAAACTAAAAAGGA 1947 consensus_14656#1 ------------------------------ consensus_14656#2 ------------------------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||