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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14656#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1947 fasta sequence
[AAAAAAACAAAATAAAAAAAAGCCCACAAAAAAAAAAGAAAAAAAAAGAGAGAGAGAAGAGAAGAAAAAGTCGTATAAAGCCGCCGCGGCGTCGACGTCGACGCCGTCGCCTCCTCCTCCCCACCAAATTCCTCCTCCG-ATTCGATCCTCTCCTCTCCTCCATCGCCGCCGCCGACGCCCGCCGCCCGCCTCCGACCCCCTCCTGCTCGGCGTCAGCATTCTTGGGCGGGTTTCGGTTTCTTGGGGTCGTCGTCGTAGCGGCCACCGAGAGGGGATCAAGAAGCTGAGGATCGCGGTGGGGCAACGAGGATTGGAGGCGCGTCTGCCCTGATCACGGCGCATTTTATGGGTGAAGAGGCTCCGGAGTTTCGTGTCGAGAGCGTCGCCTTGGAATCCAAGGACTGCCTGCAGAATGCCATAGATATAGGCGATAAGACGTATGTTATCAGCAGATCAGATGACCCCAAGTCATCGATTACCATCAAAATTTTGGACAAACTAACTCAGACTTGGGTTGTACCTACAGTACTTGGGGCACCTCCAAATCCAACCAGCTCACACTCAGCGGTTCTCGTAAACAATGAGAAGATACTGATTATTGAGAAGGGTGTTCCCTTGAATGATTCTATCTGGTTCCTTGAGGTAGACACTCCTTTTGTTAAGCAGCAGAGCAAAATTAAGGGCACAG-TTGTTGTTGCATGGAGCAAGGGAGTAATTGGTGAGGGCCAAAAGCCAATTGTGATTAGCGGGCCTTCTGGTGTTGGTAAAGGGACATTAATTGCAAAATTAATGAAAGAATATCCATCAAAGTTTGGATTTTCTGTTAGCCACACCACAAGAGCTCCAAGGGAGAAAGAAATAGATGGAGTTCATTACCACTTCACAGAACG-AAGCAAGATTGAGGAAGAGATAAGTGAGGGCAAATTTCTTGAGTTTGCTCATGTTCATGGAAATGTCTATGGCACTAGCGTTGAAGCAGTTGAATCTGTTACTGATGAGGGGAAGAGGTGTATTCTCGACATTGATGTCCAAGGAGCTCGTTCTGTGAGGGCTTCTTCTCTTGAAGCAATATTCATCTTTGTATGCCCTCCATCGTTCGAGGAACTAGAGAAGCGCCTTCGGGCACGGGGAACTGAAACAGAGGAGCAAATCCAGAAGCGACTGAGGAATGCTCGTGCGGAGCTTGACCAGTCCAATTCACCAGGTCTTTTCGATCATCTTTTGGTAAATGATGACCTTGAAGCTTGTTATGAAAATTTGAAGAAGTTGCTTTCTTTGGATGATGACCACGAAGATTCAAATGATTCTTTCATCAAGGACGGGAAAGAAACTGCATGTTACTCAATCCTGTCCAAAACAAACTCAGAAATTTTGTTGCAATCTGAGACTAACGAAGCAGAGAAAGGAA-CCAC-AA-ACTTGTTATCGCTCGACTT---GTCTCTCTCAGGAGGTGCTCCTGGACGAACAAGGGGCCTCAAGATATCCCCGGTTAACTAGATAACTCAAAACATTGTTGCTGATGGCATTGCAGAAGCACTGACGAGAAACTTTTGATCAACCTGCTTGAGATAACAGATTCAGAAACACCCTAGGACAAAGGAAAT-AAAAAAAACATGGAATTCATTTCCATTTGTTATTTGTTTGCCGGAGAGGCATCAGCTACTAGGTTCATCATACCTGAACTAGGTGAAATCATAGTGAGGAATTGTACCGTATCATTGAGGAATTGTTTGCTTCATTGTTCTTGAGAGG-TTTTTTTGTTCGTTGAACGGAGTACAATGAGGGCTCCTTTATCAGTGAAGTAAAAGAATTCATGTAGTCCTATAAACATTAATAGTTAATCCATTTGCTGGATTATGCTGTGCGTCCATCCTGATTCTCAAGCTAATTGTCTATTAGTAATAGGGAAGCTAATACAAGCAAATTGTTAGTATATCAAACTAAAAAGGA]
[+] EMBL AK071160 [AAAAAAACAAAATAAAAAAAAGCCCACAAAAAAAAAAGAAAAAAAAAGAGAGAGAGAAGAGAAGAAAAAGTCGTATAAAGCCGCCGCGGCGTCGACGTCGACGCCGTCGCCTCCTCCTCCCCACCAAATTCCTCCTCCG ATTCGATCCTCTCCTCTCCTCCATCGCCGCCGCCGACGCCCGCCGCCCGCCTCCGACCCCCTCCTGCTCGGCGTCAGCATTCTTGGGCGGGTTTCGGTTTCTTGGGGTCGTCGTCGTAGCGGCCACCGAGAGGGGATCAAGAAGCTGAGGATCGCGGTGGGGCAACGAGGATTGGAGGCGCGTCTGCCCTGATCACGGCGCATTTTATGGGTGAAGAGGCTCCGGAGTTTCGTGTCGAGAGCGTCGCCTTGGAATCCAAGGACTGCCTGCAGAATGCCATAGATATAGGCGATAAGACGTATGTTATCAGCAGATCAGATGACCCCAAGTCATCGATTACCATCAAAATTTTGGACAAACTAACTCAGACTTGGGTTGTACCTACAGTACTTGGGGCACCTCCAAATCCAACCAGCTCACACTCAGCGGTTCTCGTAAACAATGAGAAGATACTGATTATTGAGAAGGGTGTTCCCTTGAATGATTCTATCTGGTTCCTTGAGGTAGACACTCCTTTTGTTAAGCAGCAGAGCAAAATTAAGGGCACAG TTGTTGTTGCATGGAGCAAGGGAGTAATTGGTGAGGGCCAAAAGCCAATTGTGATTAGCGGGCCTTCTGGTGTTGGTAAAGGGACATTAATTGCAAAATTAATGAAAGAATATCCATCAAAGTTTGGATTTTCTGTTAGCCACACCACAAGAGCTCCAAGGGAGAAAGAAATAGATGGAGTTCATTACCACTTCACAGAACG AAGCAAGATTGAGGAAGAGATAAGTGAGGGCAAATTTATTGAGTTTGCTCATGTTCATGGAAATGTCTATGGCACTAGCGTTGAAGCAGTTGAATCTGTTACTGATGAGGGGAAGAGGTGTATTCTCGACATTGATGTCCAAGGAGCTCGTTCTGTGAGGGCTTCTTCTCTTGAAGCAATATTCATCTTTGTATGCCCTCCATCGTTCGAGGAACTAGAGAAGCGCCTTCGGGCACGGGGAACTGAAACAGAGGAGCAAATCCAGAAGCGACTGAGGAATGCTCGTGCAGAGCTTGACCAGTCCAATTCACCAGGTCTTTTCGATCATCTTTTGGTAAATGATGACCTTGAAGCTTGTTATGAAAATTTGAAGAAGTTGCTTTCTTTGGATGATGACCACGAAGATTCAAATGATTCTTTCATCAAGGACGGGAAAGAAACTGCATGTTACTCAATCCTGTCCAAAACAAACTCAGAAATTTTGTTGCAATCTGAGACTAACGAAGCAGAGAAAGGAA CCAC AA ACTTGTTATCGCTCGACTT GTCTCTCTCAGGAGGTGCTCCTGGACGAACAAGGGGCCTCAAGATATCCCCGGTTAACTAGATAACTCAAAACATTGTTGCTGATGGCATTGCAGAAGCACTGACGAGAAACTTTTGATCAACCTGCTTGAGATAACAGATTCAGAAACACCCTAGGACAAAGGAAAT AAAAAAAACATGGAATTCATTTCCATTTGTTATTTGTTTGCCGGAGAGGCATCAGCTACTAGGTTCATCATACCTGAACTAGGTGAAATCATAGTGAGGAATTGTACCGTATCATTGAGGAATTGTTTGCTTCATTGTTCTTGAGAGG TTTTTTTGTTCGTTGAACGGAGTACAATGAGGGCTCCTTTATCAGTGAAGTAAAAGAATTC ]
[+] EMBL CB628683 [ CTCCCCCT ATTCGATCCTCTCCTCTCCTCCATCGCCGCCGCCGACGCCCGCCGCCCGCCTCCGACCCCCTCCTGCTCGGCGTCAGCATTCTTGGGCGGGTTTCGGTTTCTTGGGGTCGTCGTCGTAGCGGCCACCGAGAGGGGATCAAGAAGCTGAGGATCGCGGTGGGGCAACGAGGATTGGAGGCGCGTCTGCCCTGATCACGGCGCATTTTATGGGTGAAGAGGCTCCGGAGTTTCGTGTCGAGAGCGTCGCCTTGGAATCCAAGGACTGCCTGCAGAATGCCATAGATATAGGCAATAAGACGTATGTTATCAGCAGATCAGATGACCCCAAGTCATCGATTACCATCAAAATTTTGGACAAACTAACTCAGACTTGGGTTGTACCTACAGTACTTGGGGCACCTCCAAATCCAACCAGCTCACACTCAGCGGTTCTCGTAAACAATGAGAAGATACTGATTATTGAGAAGGGTGTTCCCTTGAATGATTCTATCTGGTTCCTTGAGGTAGACACTCCTTTTGTTAAGCAGCAGAGCAAAATTAAGGGCACAG TTGTTGTTGCATGGAGCAAGGGAGTAATTGGTGAGGGCCAAAAGCCAATTGTGATTAGCGGGCCTTCTGGTGTTGGTAAAGGGACATTAATTGCAAAATTAATGAAAGAATATCCATCAAAGTTTGGATTTTCTGTTAGCCACACCACAAGAGCTCCAAGGGAGAAAGAAATAGATGGAGTTCATTACCACTTCACAGAACGAAAGC AGATTGAGGAAGAGATAAGTGAGGGC ]
[+] EMBL CB618260 [ TCCTCCGCATTCGATCCTCTCCTCTCCTCCATCGCCGCCGCCGACGCCCGCCGCCCGCCTCCGACCCCCTCCTGCTCGGCGTCAGCATTCTTGGGCGGGTTTCGGTTTCTTGGGGTCGTCGTCGTAGCGGCCACCGAGAGGGGATCAAGAAGCTGAGGATCGCGGTGGGGCAACGAGGATTGGAGGCGCGTCTGCCCTGATCACGGCGCATTTTATGGGTGAAGAGGCTCCGGAGTTTCGTGTCGAGAGCGTCGCCTTGGAATCCAAGGACTGCCTGCAGAATGCCATAGATATAGGCAATAAGACGTATGTTATCAGCAGATCAGATGACCCCAAGTCATCGATTACCATCAAAATTTTGGACAAACTAACTCAGACTTGGGTTGTACCTACAGTACTTGGGGCACCTCCAAATCCAACCAGCTCACACTCAGCGGTTCTCGTAAACAATGAGAAGATACTGATTATTGAGAAGGGTGTTCCCTTGAATGATTCTATCTGGTTCCTTGAGGTAGACACTCCTTTTGTTAAGCAGCAGAGCAAAATTAAGGGCACAG TTGTTGTTGCATGGAGCAAGGGAGTAATTGGTGAGGGCCAAAAGCCAATTGTGATTAGCGGGCCTTCTGGTGTTGGTAAAGGGACATTAATTGCAAAATTAATGAAAGAATATCCATCAAAGTTTGGATTTTCTGTTAGCCACACCACAAGAGCTCCAAGGGAGAAAGAAATAGATGGAGTTCATTACCACTTCACAGAACG AAGCAAGATTGAGGAAGAGATAAGTGAGGGCAAATTTCTTGAGTTTGCTCATGTTCATGGAAATGTCTATGGCACTAGCATTGAAGCAGTTGAATCTGTTA ]
[+] EMBL CB639951 [ TCCG ATTCGATCCTCTCCTCTCCTCCATCGCCGCCGCCGACGCCCGCCGCCCGCCTCCGACCCCCTCCTGCTCGGCGTCAGCATTCTTGGGCGGGTTTCGGTTTCTTGGGGTCGTCGTCGTAGCGGCCACCGAGAGGGGATCAAGAAGCTGAGGATCGCGGTGGGGCAACGAGGATTGGAGGCGCGTCTGCCCTGATCACGGCGCATTTTATGGGTGAAGAGGCTCCGGAGTTTCGTGTCGAGAGCGTCGCCTTGGAATCCAAGGACTGCCTGCAGAATGCCATAGATATAGGCGATAAGACGTATGTTATCAGCAGATCAGATGACCCCAAGTCATCGATTACCATCAAAATTTTGGACAAACTAACTCAa ]
[+] EMBL CB620357 [ GATCCCCTCCACTCCTCCATCGCCGCCGCCGACGCCCGCCGCCCGCCTCCGACCCCCTCCTGCTCGGCGTCAGCATTCTTGGGCGGGTTTCGGTTTCTTGGGGTCGTCGTCGTAGCGGCCACCGAGAGGGGATCAAGAAGCTGAGGATCGCGGTGGGGCAACGAGGATTGGAGGCGCGTCTGCCCTGATCACGGCGCATTTTATGGGTGAAGAGGCTCCGGAGTTTCGTGTCGAGAGCGTCGCCTTGGAATCCAAGGACTGCCTGCAGAATGCCATAGATATAGGCAATAAGACGTATGTTATCAGCAGATCAGATGACCCCAAGTCATCGATTACCATCAAAATTTTGGACAAACTAACTCAGACTTGGGTTGTACCTACAGTACTTGGGGCACCTCCAAATCCAACCAGCTCACACTCAGCGGTTCTCGTAAACAATGAGAAGATACTGATTATTGAGAAGGGTGTTCCCTTGAATGATTCTATCTGGTTCCTTGAGGTAGACACTCCTTTTGTTAAGCAGCAGAGCAAAATTAAGGGCACAG TTGTTGTTGCATGGAGCAAGGGAGTAATTGGTGAGGGCCAAAAGCCAATTGTGATTAGCGGGCCTTCTGGTGTTGGTAAAGGGACATTAATTGCAAAATTAATGAAAGAATATCCATCAAAGTTTGGATTTTCTGTTAGCCACACCACAAGAGCTCCAAGGGAGAAAGAAATAGATGGAGTTCATTACCACTTCACAGAACG AAGCAAGATTGAGGAAGAGATAAGTGA ]
[+] EMBL CB639965 [ CTCCTCTCCTCCATCGCCGCCGCCGACGCCCGCCGCCCGCCTCCGACCCCCTCCTGCTCGGCGTCAGCATTCTTGGGCGGGTTTCGGTTTCTTGGGGTCGTCGTCGTAGCGGCCACCGAGAGGGGATCAAGAAGCTGAGGATCGCGGTGGGGCAACGAGGATTGGAGGCGCGTCTGCCCTGATCACGGCGCATTTTATGGGTGAAGAGGCTCCGGAGTTTCGTGTCGAGAGCGTCGCCTTGGAATCCAAGGACTGCCTGCAGAATGCCATAGATATAGGCGATAAGACGTATGTTATCAGCAGATCAGATGACCCCAAGTCATCGATTACCATCAAAATTTTGGACAAACTAACTCAGACTTGGGTTGTACCTACAGTACTTGGGGCACCTCCAAATCCAACCAGCTCACACTCAGCGGTTCTCGTAAACAATGAGAAGATACTGATTATTGAGAAGGGTGTTCCCTTGAATGATTCTATCTGGTTCCTTGAGGTAGACACTCCTTTTGTTAAGCAGCAGAGCAAAATTAAGGGCACAG TT ]
[+] EMBL CF324199 [ CTGAGGATCGCGGTGGGGCAACGAGGATTGGAGGCGCGTCTGCCCTGATCACGGCGCATTTTATGGGTGAAGAGGCTCCGGAGTTTCGTGTCGAGAGCGTCGCCTTGGAATCCAAGGACTGCCTGCAGAATGCCATAGATATAGGCGATAAGACGTATGTTATCAGCAGATCAGATGACCCCAAGTCATCGATTACCATCAAAATTTTGGACAAACTAACTCAGACTTGGGTTGTACCTACAGTACTTGGGGCACCTCCAAATCCAACCAGCTCACACTCAGCGGTTCTCGTAAACAATGAGAAGATACTGATTATTGAGAAGGGTGTTCCCTTGAATGATTCTATCTGGTTCCTTGAGGTAGACACTCCTTTTGTTAAGCAGCAGAGCAAAATTAAGGGCACAGNTTGTTGTTGCATGGAGCAAGGGAGTAATTGGTGAGGGCCAAAAGCCAATTGTGATTAGCGGGCCTTCTGGTGTTGGTAAAGGGACATTAATTGCAAAA ]
[+] EMBL CB000055 [ GAGAAGGGTGTTCCCTTGAATGATTCTATCTGCCTTCTTGAGGTAGACACTCCTTTTGTTAAGCAGCAGAGCAAAATTAAGGGCACAG TTGTTGTTGCATGGAGCAAGGGAGTAATTGGTGAGGGCCAAAAGCCAATTGTGATTAGCGGGCCTTCTGGTGTTGGTAAAGGGACATTAATTGCAAAATTAATGAAAGAATATCCATCAAAGTTTGGATTTTCTGTTAGCCACACCACAAGAGCTCCAAGGGAGAAAGAAATAGATGGAATTCATTACCACTTCACAGAACG AAGCAAGATTGAGGAAGAGATAAGTGAGGGCAAATTTCTTGATTTTGCTCATGTTCATGGAAATGTCTATGGCACTAGCGTTGAAGCAGTTGAATCTGTTACTGATGAGGGGAAGAGGTGTATTCTCGACATTGATGTCCAAGGAGCTCGTTCTGTGAGGGCTTCTTCTCTTGAAGCAATATTCATCTTTGTATGCCCTCCATCGTTCGAGGAACTAGAGAAGCGCCTTCGGCCACGGGGAACTGAAACAGAGGACGAAATCCACAAGCGACTGATGAATGCTCGTGCGGAGCTTGACCA ]
[+] EMBL CB000489 [ TTCTGTTAGCCACACCACAAGAGCTCCAAGGGCGATAGAAATAGATGGAATTCATTACCACTTCACAGAACG AAGCAAGATTGAGGAAGAGATAAGTGAGGGCAAATTTCTTGAGTTTGCTCATGTTCATGGAAATGTCTATGGCACTAGCGTTGAAGCAGTTGAATCTGTTACTGATGAGGGGAAGAGGTGTATTCTCGACATTGATGTCCAAGGAGCTCGTTCTGTGAGGGCTTCTTCTCTTGAAGCAATATTCATCTTTGTATGCCCTCCATCGTTCGAGGAACTAGAGAAGCGCCTTCGGGCACGGGGAACTGAAACAGAGGAGCAAATCCAGAAGCGACTGAGGAATGCTCGTGCGGAGCTTGACCAGTCCAATTCACCAGGTCTTTTCGATCATCTTTTGGTAAATGATGACCTTGAAGCTTGTTATGAAAATTTGAAGAAGTTGCTTTCTTTGGATGATGACCACGAAGATTCAAATGATTCTTTCATCAAGGACGGGAAAGAAACTGCATGTTACTCAATCCTGTCCAAAACAAACTCAGAAATTTTGTTGCAATCTGAGACTAACGAAGCAGAGAAAGGAA CCAC AA ACTTGTTATCGCTCGACTT GTCTCTCTCAGGAGGTGCTCCTGGACGAACAAGGGGCCTCAAGATATCCCCGGTTAACTAGATAACTCAAAACATTGTTGCTGATGGCATTGCAGAAGCACTGACGAGAAACTTTTGATCAACCTGCTTGAGATAACAGATTCAGAAACACCCTAGGACAAAGGAAATAAAAAAAAACATGGAATTCATTTCCATTTGTTATTTGTTTGCCGGAGAGGCATCAGCTACTAGGTTCAT ]
[-] EMBL CB657371 [ TCCATCGTTCGAGGAACTAGAGAAGCGCCTTCGGGCACGGGGAACTGAAACAGAGGAGCAAATCCAGAAGCGACTGAGGAATGCTCGTGCAGAGCTTGACCAGTCCAATTCACCAGGTCTTTTCGATCATCTTTTGGTAAATGATGACCTTGAAGCTTGTTATGAAAATTTGAAGAAGTTGCTTTCTTTGGATGATGACCACGAAGATTCAAATGATTCTTTCATCAAGGACGGGAAAGAAACTGCATGTTACTCAATCCTGTCCAAAACAAACTCAGAAATTTTGTTGCAATCTGAGACTAACGAAGCAGAGAAAGGAA CCAC AA ACTTGTTATCGCTCGACTT GTCTCTCTCAGGAGGTGCTCCTGGACGAACAAGGGGCCTCAAGATATCCCCGGTTAACTAGATAACTCAAAACATTGTTGCTGATGGCATTGCAGAAGCACTGACGAGAAACTTTTGATCAACCTGCTTGAGATAACAGATTCAGAAACACCCTAGGACAAAGGAAAT AAAAAAAACATGGAATTCATTTCCATTTGTTATTTGTTTGCCGGAGAGGCATCAGCTACTAGGTTCATCATACCTGAACTAGGTGAAATCATAGTGAGGAATTGTACCGTATCATTGAGGAATTGTTTGCTTCATTGTTCTTGAGAGG TTTTTTTGTTCGTTGAACGGAGTACAATGAGGGCTCCTTTATCAGTGAAGTAAAAGAATTCATGTAGTCCTATAAACATTAATAGTTAATCCATTTGCTGGATTATGCTGTGCGT ]
[-] EMBL CB620358 [ AGAGGAGCAAATCCAGAAGCGACTGAGGAATGCTCGTGCGGAGCTTGACCAGTCCAATTCACCAGGTCTTTTCGATCATCTTTTGGTAAATGATGACCTTGAAGCTTGTTATGAAAATTTGAAGAAGTTGCTTTCTTTGGATGATGACCACGAAGATTCAAATGATTCTTTCATCAAGGACGGGAAAGAAACTGCATGTTACTCAATCCTGTCCAAAACAAACTCAGAAATTTTGTTGCAATCTGAGACTAACGAAGCAGAGAAAGGAA CCAC AA ACTTGATATCGCTCGACTTGTCGTCTCTCTCAGGAGGTGCTCCTGGACGAACAAGGGGCCTCAAGATATCCCCGTTTAACTAGATAACTCAAAACATTGTTGCTGATGGCATTGCAGAAGCACTGACGAGAAACTTTTGATCAACCTGCTTGAGATAACAGATTCAGAAACACCCTAGGACAAAGGAAAT AAAAAAACATGGAATTCATTTCCATTTGTTATTTGTTTGCCGGAGAGGCATCAGCTACTAGGTTCATCATACCTGAACTAGGTGAAATCATAGTGAGGAATTGTACCGTATCATTGAGGAATTGTTTGCTTCATTGTTCTTGAGAGG TTTTTTTGTTCGTTGAACGGAGTACAATGAGGGCTCCTTTATCAGTGAAGTAAAAGAATTCATGTAGTCCTATAAACATTAATAGTTAATCCATTTGCTGGATTATGCTGTGCGTCCATCCTGATTCTCAAGCTAATTGTCTATTAGTAATAGGGAAGCTAATACAAGCAAATTGTTAGTATATCAAACTAAAAAGGA]
[-] EMBL CB639280 [ GACCTTGAAGCTTGTTATGAAAATTTGAAGAAGTTGCTTTCTTTGGATGATGACCACGAAGATTCAAATGATTCTTTCATCAAGGACGGGAAAGAAACTGCATGTTACTCAATCCTGTCCAAAACAAACTCAGAAATTTTGTTGCAATCTGAGACTAACGAAGCAGAGAAAGGAA CCAC AA ACTTGTTATCGCTCGACTT GTCTCTCTCAGGAGGTGCTCCTGGACGAACAAGGGGCCTCAAGATATCCCCGGTTAACTAGATAACTCAAAACATTGTTGCTGATGGCATTGCAGAAGCACTGACGAGAAACTTTTGATCAACCTGCTTGAGATAACAGATTCAGAAACACCCTAGGACAAAGGAAAT AAAAAAAACATGGAATTCATTTCCATTTGTTATTTGTTTGCCGGAGAGGCATCAGCTACTAGGTTCATCATACCTGAACTAGGTGAAATCATAGTGAGGAATTGTACCGTATCATTGAGGAATTGTTTGCTTCATTGTTCTTGAGAGG TTTTTTTGTTCGTTGAACGGAGTACAATGAGGGCTCCTTTATCAGTGAAGTAAAAGAATTCATGTAGTCCTATAAACATTAATAGTTAATCCATT ]
[-] EMBL CF324307 [ TTCTTTCATCAAGGACGGGAAAGAAACTGCATGTTACTCAATCCTGTCCAAAACAAACTCAGAAATTTTGTTGCAATCTGAGACTAACGAAGCAGAGAAAGGAA CCAC AANACTTGTTATCGCTCGACTT GTCTCTCTCAGGAGGTGCTCCTGGACGAACAAGGGGCCTCAAGATATCCCCGGTTAACTAGATAACTCAAAACATTGTTGCTGATGGCATTGCAGAAGCACTGACGAGAAACTTTTGATCAACCTGCTTGAGATAACAGATTCAGAAACACCCTAGGACAAAGGAAAT AAAAAAAACATGGAATTCATTTCCATTTGTTATTTGTTTGCCGGAGAGGCATCAGCTACTAGGTTCATCATACCTGAACTAGGTGAAATCATAGTGAGGAATTGTACCGTATCATTGAGGAATTGTTTGCTTCATTGTTCTTGAGAGG TTTTTTTGTTCGTTGAACGGAGTACAATGAGGGCTCCTTTATCAGTGAAGTAAAAGAATTCA ]
[-] EMBL CF303001 [ CAGAAATTTTGTTGCAATCTGAGACTAACGAAGCAGAGAAAGGAACCCACAAA ACTTGTTATCGCTCGACTT GTCTCTCTCAGGAGGTGCTCCTGGACGAACAAGGGGCCTCAAGATATCCCCGGTTAACTAGATAACTCAAAACATTGTTGCTGATGGCATTGCAGAAGCACTGACGAGAAACTTTTGATCAACCTGCTTGAGATAACAGATTCAGAAACACCCTAGGACAAAGGAAAT AAAAAAAACATGGAATTCATTTCCATTTGTTATTTGTTTGCCGGAGAGGCATCAGCTACTAGGTTCATCATACCTGAACTAGGTGAAATCATAGTGAGGAATTGTACCGTATCATTGAGGAATTGTTTGCTTCATTGTTCTTGAGAGG TTTTTTTGTTCGTTGAACGGAGTACAATGAGGGCTCCTTTATCAGTGAAGTAAAAGAATTCATGTAGTCCTATAAACATTAATAGTTAATCCATTTGCTGGAaaaaa ]
[-] EMBL AA750318 [ CGTATCATTGAGGAATTGTTTGCTTCATTGTTCTTGAGAGGTTTTTTTTGTTCGTTGAACGGAGTACAATGAGGGCTCCTTTATCAGTGAAGTAAAAGAATTCATGTAGTCCTATAAACATTAATAGTTAATCCATTTGCTGGATTATG ]
consensusID : consensus_14656#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 703 fasta sequence
[CCAATTCACCAGGTCTTTTCGATCATCTTTTGGTAAATGATGCCCTTGAAGCTTGTTATGAAAATTTGAAGAAGTTGCTTTCTTTGGATGATGCCCACGAAGATTCAAATGATTCTTTCATCAAGGACGGGAAAGAAACTGCATGTTACTCAATCCTGTCCAAAACAAACTCAGAAATTTTGTTGCAATCTGAGACTAACGAAGCAGAGAAAGGACCCCCAAACTTGATATCGCTCGACTTGTCGTCTCTCTCAGGAGGTGCTCCTGGACGAACAAGGGGCCTCAAGATATCCCCGGTTAACTAGATAACTCAAAACATTGTTGCTGATGGCATTGCAGAAGCACTGACGAGAAACTTTTGATCACCCTGCTTGAGATAACAGATTCAGAAACCCCCTAGGACAAAGGAAATAAAAAAACATGGAATTCATTTCCATTTGTTATTTGTTTGCCGGAGAGGCATCAGCTACTAGGTTCATCATCCCTGAATTAGGTGAAATCATAGTGAGGAATTGTCCCGTATCATTGAGGAATTGTTTGCTTCATTGTTCTTGAGAGGTTTTTTTGTTCGTTGAACGGAGTACAATGAGGGCTCCTTTATCAGTGAAGTAAAAGAATTCATGTAGTCCTATAACCATTAATAGTTAATCCATTTGTTAAGGTATGCTGTGCGTCAAAAAAAAAAAAAAAAAAACTTAAAGGA]
[-] EMBL CB618261 [CCAATTCACCAGGTCTTTTCGATCATCTTTTGGTAAATGATGCCCTTGAAGCTTGTTATGAAAATTTGAAGAAGTTGCTTTCTTTGGATGATGCCCACGAAGATTCAAATGATTCTTTCATCAAGGACGGGAAAGAAACTGCATGTTACTCAATCCTGTCCAAAACAAACTCAGAAATTTTGTTGCAATCTGAGACTAACGAAGCAGAGAAAGGACCCCCAAACTTGATATCGCTCGACTTGTCGTCTCTCTCAGGAGGTGCTCCTGGACGAACAAGGGGCCTCAAGATATCCCCGGTTAACTAGATAACTCAAAACATTGTTGCTGATGGCATTGCAGAAGCACTGACGAGAAACTTTTGATCACCCTGCTTGAGATAACAGATTCAGAAACCCCCTAGGACAAAGGAAATAAAAAAACATGGAATTCATTTCCATTTGTTATTTGTTTGCCGGAGAGGCATCAGCTACTAGGTTCATCATCCCTGAATTAGGTGAAATCATAGTGAGGAATTGTCCCGTATCATTGAGGAATTGTTTGCTTCATTGTTCTTGAGAGGTTTTTTTGTTCGTTGAACGGAGTACAATGAGGGCTCCTTTATCAGTGAAGTAAAAGAATTCATGTAGTCCTATAACCATTAATAGTTAATCCATTTGTTAAGGTATGCTGTGCGTCAAAAAAAAAAAAAAAAAAACTTAAAGGA]
consensusID : consensus_14656#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 210 fasta sequence
[AGCATAATCCAGCAAAGGGATTAACTATTAATGTTTATAGGACTACATTGTGAGGTGAGACTATACTCACCATTAATGTGNCGGTTGGCGNCTCACGTGGCCCGGCTATTCCAGGTCGGGNACAACCTGGTCGGTGCCAGGCGTGGCATTAAGTGAATCGGGCCAACGGCGCGGGGGAGAGGGCGGTTTGGCGTATTGGGGCGCTCTTCC]
[+] EMBL CB965228 [AGCATAATCCAGCAAAGGGATTAACTATTAATGTTTATAGGACTACATTGTGAGGTGAGACTATACTCACCATTAATGTGNCGGTTGGCGNCTCACGTGGCCCGGCTATTCCAGGTCGGGNACAACCTGGTCGGTGCCAGGCGTGGCATTAAGTGAATCGGGCCAACGGCGCGGGGGAGAGGGCGGTTTGGCGTATTGGGGCGCTCTTCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14656#0 AAAAAAACAAAATAAAAAAAAGCCCACAAAAAAAAAAGAAAAAAAAAGAGAGAGAGAAGA 60
consensus_14656#1 ------------------------------------------------------------
consensus_14656#2 ------------------------------------------------------------
consensus_14656#0 GAAGAAAAAGTCGTATAAAGCCGCCGCGGCGTCGACGTCGACGCCGTCGCCTCCTCCTCC 120
consensus_14656#1 ------------------------------------------------------------
consensus_14656#2 ------------------------------------------------------------
consensus_14656#0 CCACCAAATTCCTCCTCCGATTCGATCCTCTCCTCTCCTCCATCGCCGCCGCCGACGCCC 180
consensus_14656#1 ------------------------------------------------------------
consensus_14656#2 ------------------------------------------------------------
consensus_14656#0 GCCGCCCGCCTCCGACCCCCTCCTGCTCGGCGTCAGCATTCTTGGGCGGGTTTCGGTTTC 240
consensus_14656#1 ------------------------------------------------------------
consensus_14656#2 ------------------------------------------------------------
consensus_14656#0 TTGGGGTCGTCGTCGTAGCGGCCACCGAGAGGGGATCAAGAAGCTGAGGATCGCGGTGGG 300
consensus_14656#1 ------------------------------------------------------------
consensus_14656#2 ------------------------------------------------------------
consensus_14656#0 GCAACGAGGATTGGAGGCGCGTCTGCCCTGATCACGGCGCATTTTATGGGTGAAGAGGCT 360
consensus_14656#1 ------------------------------------------------------------
consensus_14656#2 ------------------------------------------------------------
consensus_14656#0 CCGGAGTTTCGTGTCGAGAGCGTCGCCTTGGAATCCAAGGACTGCCTGCAGAATGCCATA 420
consensus_14656#1 ------------------------------------------------------------
consensus_14656#2 ------------------------------------------------------------
consensus_14656#0 GATATAGGCGATAAGACGTATGTTATCAGCAGATCAGATGACCCCAAGTCATCGATTACC 480
consensus_14656#1 ------------------------------------------------------------
consensus_14656#2 ------------------------------------------------------------
consensus_14656#0 ATCAAAATTTTGGACAAACTAACTCAGACTTGGGTTGTACCTACAGTACTTGGGGCACCT 540
consensus_14656#1 ------------------------------------------------------------
consensus_14656#2 ------------------------------------------------------------
consensus_14656#0 CCAAATCCAACCAGCTCACACTCAGCGGTTCTCGTAAACAATGAGAAGATACTGATTATT 600
consensus_14656#1 ------------------------------------------------------------
consensus_14656#2 ------------------------------------------------------------
consensus_14656#0 GAGAAGGGTGTTCCCTTGAATGATTCTATCTGGTTCCTTGAGGTAGACACTCCTTTTGTT 660
consensus_14656#1 ------------------------------------------------------------
consensus_14656#2 ------------------------------------------------------------
consensus_14656#0 AAGCAGCAGAGCAAAATTAAGGGCACAGTTGTTGTTGCATGGAGCAAGGGAGTAATTGGT 720
consensus_14656#1 ------------------------------------------------------------
consensus_14656#2 ------------------------------------------------------------
consensus_14656#0 GAGGGCCAAAAGCCAATTGTGATTAGCGGGCCTTCTGGTGTTGGTAAAGGGACATTAATT 780
consensus_14656#1 ------------------------------------------------------------
consensus_14656#2 ------------------------------------------------------------
consensus_14656#0 GCAAAATTAATGAAAGAATATCCATCAAAGTTTGGATTTTCTGTTAGCCACACCACAAGA 840
consensus_14656#1 ------------------------------------------------------------
consensus_14656#2 ------------------------------------------------------------
consensus_14656#0 GCTCCAAGGGAGAAAGAAATAGATGGAGTTCATTACCACTTCACAGAACGAAGCAAGATT 900
consensus_14656#1 ------------------------------------------------------------
consensus_14656#2 ------------------------------------------------------------
consensus_14656#0 GAGGAAGAGATAAGTGAGGGCAAATTTCTTGAGTTTGCTCATGTTCATGGAAATGTCTAT 960
consensus_14656#1 ------------------------------------------------------------
consensus_14656#2 ------------------------------------------------------------
consensus_14656#0 GGCACTAGCGTTGAAGCAGTTGAATCTGTTACTGATGAGGGGAAGAGGTGTATTCTCGAC 1020
consensus_14656#1 ------------------------------------------------------------
consensus_14656#2 ------------------------------------------------------------
consensus_14656#0 ATTGATGTCCAAGGAGCTCGTTCTGTGAGGGCTTCTTCTCTTGAAGCAATATTCATCTTT 1080
consensus_14656#1 ------------------------------------------------------------
consensus_14656#2 ------------------------------------------------------------
consensus_14656#0 GTATGCCCTCCATCGTTCGAGGAACTAGAGAAGCGCCTTCGGGCACGGGGAACTGAAACA 1140
consensus_14656#1 ------------------------------------------------------------
consensus_14656#2 ------------------------------------------------------------
consensus_14656#0 GAGGAGCAAATCCAGAAGCGACTGAGGAATGCTCGTGCGGAGCTTGACCAGTCCAATTCA 1200
consensus_14656#1 ----------------------------------------------------CCAATTCA 8
consensus_14656#2 ------------------------------------------------------------
consensus_14656#0 CCAGGTCTTTTCGATCATCTTTTGGTAAATGATGACCTTGAAGCTTGTTATGAAAATTTG 1260
consensus_14656#1 CCAGGTCTTTTCGATCATCTTTTGGTAAATGATGCCCTTGAAGCTTGTTATGAAAATTTG 68
consensus_14656#2 ------------------------------------------------------------
consensus_14656#0 AAGAAGTTGCTTTCTTTGGATGATGACCACGAAGATTCAAATGATTCTTTCATCAAGGAC 1320
consensus_14656#1 AAGAAGTTGCTTTCTTTGGATGATGCCCACGAAGATTCAAATGATTCTTTCATCAAGGAC 128
consensus_14656#2 ------------------------------------------------------------
consensus_14656#0 GGGAAAGAAACTGCATGTTACTCAATCCTGTCCAAAACAAACTCAGAAATTTTGTTGCAA 1380
consensus_14656#1 GGGAAAGAAACTGCATGTTACTCAATCCTGTCCAAAACAAACTCAGAAATTTTGTTGCAA 188
consensus_14656#2 ------------------------------------------------------------
consensus_14656#0 TCTGAGACTAACGAAGCAGAGAAAGGAACCACAAACTTGTTATCGCTCGACTTGTC---T 1437
consensus_14656#1 TCTGAGACTAACGAAGCAGAGAAAGGACCCCCAAACTTGATATCGCTCGACTTGTCGTCT 248
consensus_14656#2 ------------------------------------------------------------
consensus_14656#0 CTCTCAGGAGGTGCTCCTGGACGAACAAGGGGCCTCAAGATATCCCCGGTTAACTAGATA 1497
consensus_14656#1 CTCTCAGGAGGTGCTCCTGGACGAACAAGGGGCCTCAAGATATCCCCGGTTAACTAGATA 308
consensus_14656#2 ------------------------------------------------------------
consensus_14656#0 ACTCAAAACATTGTTGCTGATGGCATTGCAGAAGCACTGACGAGAAACTTTTGATCAACC 1557
consensus_14656#1 ACTCAAAACATTGTTGCTGATGGCATTGCAGAAGCACTGACGAGAAACTTTTGATCACCC 368
consensus_14656#2 ------------------------------------------------------------
consensus_14656#0 TGCTTGAGATAACAGATTCAGAAACACCCTAGGACAAAGGAAATAAAAAAAACATGGAAT 1617
consensus_14656#1 TGCTTGAGATAACAGATTCAGAAACCCCCTAGGACAAAGGAAATAAAAAAA-CATGGAAT 427
consensus_14656#2 ------------------------------------------------------------
consensus_14656#0 TCATTTCCATTTGTTATTTGTTTGCCGGAGAGGCATCAGCTACTAGGTTCATCATACCTG 1677
consensus_14656#1 TCATTTCCATTTGTTATTTGTTTGCCGGAGAGGCATCAGCTACTAGGTTCATCATCCCTG 487
consensus_14656#2 ---------------AGCATAATCCAGCAAAGGGATTAACTATTA--------ATGTTT- 36
* * * * * *** ** * *** ** ** *
consensus_14656#0 AACTAGGTGAAATCATAGTGAGGAATTGTACCGTATCATTGAGGAATTGTTTGCTTCATT 1737
consensus_14656#1 AATTAGGTGAAATCATAGTGAGGAATTGTCCCGTATCATTGAGGAATTGTTTGCTTCATT 547
consensus_14656#2 -ATAGGACTACATTGTGAGGTGAGACTATACT-CACCATTAATGTGNCGGTTGGCGN--- 91
* * * ** * * * * * * * * **** * * * ***
consensus_14656#0 GTTCTTGAGAGGTTTTTTTGTTCGTTGAACGGAGTACAATGAGGGCTCCTTTATCAGTGA 1797
consensus_14656#1 GTTCTTGAGAGGTTTTTTTGTTCGTTGAACGGAGTACAATGAGGGCTCCTTTATCAGTGA 607
consensus_14656#2 ---CTCACGTGGCCCGGCTATTC--CAGGTCGGGNACAACCTGGTCGGTGCCAGGCGTGG 146
** * ** * *** * * **** ** * * ***
consensus_14656#0 AGTAAAAGAATTCATGTAGTCCTATAAACATTAATAGTTAATCCATTTGCTGGATTATGC 1857
consensus_14656#1 AGTAAAAGAATTCATGTAGTCCTATAACCATTAATAGTTAATCCATTTGTTAAGGTATGC 667
consensus_14656#2 CATTAAGTGAATCGGG-----CCAACGGCGCGGGGGAGAGGGCGGTTTGGCGTATTGGGG 201
* ** * ** * * * * * **** * *
consensus_14656#0 TGTGCGTCCATCCTGATTCTCAAGCTAATTGTCTATTAGTAATAGGGAAGCTAATACAAG 1917
consensus_14656#1 TGTGCGTCAAAAAAAA-----AAAAAAAAAAACTTAAAGGA------------------- 703
consensus_14656#2 CGCTCTTCC--------------------------------------------------- 210
* * **
consensus_14656#0 CAAATTGTTAGTATATCAAACTAAAAAGGA 1947
consensus_14656#1 ------------------------------
consensus_14656#2 ------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||